Sgr019865 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr019865
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationtig00153424: 267221 .. 267660 (+)
RNA-Seq ExpressionSgr019865
SyntenySgr019865
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGAGCTAGAGGTGGCATTAGACGAGAGTAGCGAATGGAACGAAAGGCTCTATAAGACGTGTTGGGAATAGTAAGTTAAATGAATCGTTTTTCTAAAACGATTCTTTTCGAGTTTTGCTTCTCTAGAGAAGATGAGACGCTAAAAATGAAAGTGTTCGGAACAGAACCGCGTCCGCATCTTCATCAGTAGAAGTGTTGTTGCCCGCTGGGGGAAGGAAAGTTCTGTGGGTTTTCCTTCCAGGACCGGAGAAGGTCAAACTCTGGGCGGGCTGCCAGGTTTCGCCTACACTACAGTTGAACAAGATTGAACCTTTTTTGTTCAACCGAAGTAAAGGAGTTTCAAAGCACGAGGGAATGGGCTTTCATTCCCGAGACCGCTGTCGACTACGTATGCCTGCCCGCTTCTTGCTCGACCTTCTCTCCATGCTCTTTTGA

mRNA sequence

ATGGCTAGAGCTAGAGGTGGCATTAGACGAGAAACCGCGTCCGCATCTTCATCAGTAGAAGTGTTGTTGCCCGCTGGGGGAAGGAAAGTTCTGTGGGTTTTCCTTCCAGGACCGGAGAAGGTCAAACTCTGGGCGGGCTGCCAGGTTTCGCCTACACTACAGTTGAACAAGATTGAACCTTTTTTGTTCAACCGAAGTAAAGGAGTTTCAAAGCACGAGGGAATGGGCTTTCATTCCCGAGACCGCTGTCGACTACGTATGCCTGCCCGCTTCTTGCTCGACCTTCTCTCCATGCTCTTTTGA

Coding sequence (CDS)

ATGGCTAGAGCTAGAGGTGGCATTAGACGAGAAACCGCGTCCGCATCTTCATCAGTAGAAGTGTTGTTGCCCGCTGGGGGAAGGAAAGTTCTGTGGGTTTTCCTTCCAGGACCGGAGAAGGTCAAACTCTGGGCGGGCTGCCAGGTTTCGCCTACACTACAGTTGAACAAGATTGAACCTTTTTTGTTCAACCGAAGTAAAGGAGTTTCAAAGCACGAGGGAATGGGCTTTCATTCCCGAGACCGCTGTCGACTACGTATGCCTGCCCGCTTCTTGCTCGACCTTCTCTCCATGCTCTTTTGA

Protein sequence

MARARGGIRRETASASSSVEVLLPAGGRKVLWVFLPGPEKVKLWAGCQVSPTLQLNKIEPFLFNRSKGVSKHEGMGFHSRDRCRLRMPARFLLDLLSMLF
Homology
[Close]
BLAST of Sgr019865 vs. NCBI nr
Match: KAA0056231.1 (hypothetical protein E6C27_scaffold967G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 7.0e-12
Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 21  VLLPAGGRKVLWVFLPGPEKVKLWAGCQVSPTLQLNKIEPFLFNRSKGVSKHE 74
           V LPA GRKV W+FL G EKVKLWAGC+VSP L+  KIEP LFNRS+GV K E
Sbjct: 76  VFLPARGRKVQWLFLLGLEKVKLWAGCRVSPMLRFQKIEPCLFNRSQGVPKQE 128

[Close]
BLAST of Sgr019865 vs. NCBI nr
Match: KAA0042227.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 7.0e-12
Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 21  VLLPAGGRKVLWVFLPGPEKVKLWAGCQVSPTLQLNKIEPFLFNRSKGVSKHE 74
           V LPA GRKV W+FL G EKVKLWAGC+VSP L+  KIEP LFNRS+GV K E
Sbjct: 76  VFLPARGRKVQWLFLLGLEKVKLWAGCRVSPMLRFQKIEPCLFNRSQGVPKQE 128

[Close]
BLAST of Sgr019865 vs. NCBI nr
Match: KAA0064098.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 7.7e-11
Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 21  VLLPAGGRKVLWVFLPGPEKVKLWAGCQVSPTLQLNKIEPFLFNRSKGVSK 72
           V LP  GRKV W+FL G EKVKLWAGC+VSP L+  KIEP LFNRS+GV K
Sbjct: 76  VFLPVRGRKVQWLFLLGLEKVKLWAGCRVSPMLRFQKIEPCLFNRSQGVPK 126

[Close]
BLAST of Sgr019865 vs. ExPASy TrEMBL
Match: A0A5A7TKL6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold129G00170 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.4e-12
Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 21  VLLPAGGRKVLWVFLPGPEKVKLWAGCQVSPTLQLNKIEPFLFNRSKGVSKHE 74
           V LPA GRKV W+FL G EKVKLWAGC+VSP L+  KIEP LFNRS+GV K E
Sbjct: 76  VFLPARGRKVQWLFLLGLEKVKLWAGCRVSPMLRFQKIEPCLFNRSQGVPKQE 128

[Close]
BLAST of Sgr019865 vs. ExPASy TrEMBL
Match: A0A5A7URS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold967G00180 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.4e-12
Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 21  VLLPAGGRKVLWVFLPGPEKVKLWAGCQVSPTLQLNKIEPFLFNRSKGVSKHE 74
           V LPA GRKV W+FL G EKVKLWAGC+VSP L+  KIEP LFNRS+GV K E
Sbjct: 76  VFLPARGRKVQWLFLLGLEKVKLWAGCRVSPMLRFQKIEPCLFNRSQGVPKQE 128

[Close]
BLAST of Sgr019865 vs. ExPASy TrEMBL
Match: A0A5A7V903 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2613G00020 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.7e-11
Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 21  VLLPAGGRKVLWVFLPGPEKVKLWAGCQVSPTLQLNKIEPFLFNRSKGVSK 72
           V LP  GRKV W+FL G EKVKLWAGC+VSP L+  KIEP LFNRS+GV K
Sbjct: 76  VFLPVRGRKVQWLFLLGLEKVKLWAGCRVSPMLRFQKIEPCLFNRSQGVPK 126

The following BLAST results are available for this feature:
BLAST of Sgr019865 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0056231.17.0e-1271.70hypothetical protein E6C27_scaffold967G00180 [Cucumis melo var. makuwa][more]
KAA0042227.17.0e-1271.70Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0064098.17.7e-1170.59Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
BLAST of Sgr019865 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr019865 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TKL63.4e-1271.70Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7URS53.4e-1271.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V9033.7e-1170.59Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
BLAST of Sgr019865 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr019865.1Sgr019865.1mRNA