Sgr019828 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019828
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Histone H3.2
Location	tig00153419: 453693 .. 457848 (+)
RNA-Seq Expression	Sgr019828
Synteny	Sgr019828

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCGAGCCAGGCATCTAGCCCAAAGGAACGCAAATCGTAAGCCACCAGGTTCTCTCTCTATCTCTTTCTCTTCTACCCATATGTACGCAGTAATTTATGTTAATTTTACGTTTTTATTTATGAATTTTTGGATGGGATAATGATTCTGTCCATGGAAATGTTTTTGGATGCTGGGGTGCCGATTTTTAGGCTTTTGTCTTTGTTTTTGTTTTCCCCCTCTTTCTTACAGCTTCTCGTTTTCTGTAAAATCTTAGGTACTGGAGTTGCATCGTCTTCCCCAGCTGGGCCGTCGACGGTATCTCTTTCTCGCTTTCTGTAGCAATGTTAGGATTTTTTCTTTTCGTATTGCGACTTCCGTCAATGTTTAATGAATGTAGCTTCTGAATTTTTGTTTTTCTTTCGTATTTTTTCCCTCCTTCAACGTTTCTATTTTCTTTGGTTATGGGTTTGTGAAATCTGGTTTCGGCAGATACGGCGACTTAAGAACTTTTGGAAATGAGAATGTTGCCATTGTTTTCCAGTTTTGACGTACACTTTCTTCTCCAAAGAAAGGAAAAAGAACCACAACTCTTCCTCATCATCTTCCTGAGAAAACACTAGGAATGAGTGAATAAATTTTTAAATCTTGGTCCTATCTATTTTTGCCACAATGTTCTATGTGGCAAAGGTGAGGCTAAATGGCAATATTATGGTACTTTCTTGCATTTCAATTTTACGTTCTTAAATGCGTTATTGGCTTCACTTAGCAAGTGTGCTTTGATGAGATCTCAACCCTAGAGTTGCTTAGTATGTGTGGGGGTTGAATGACCAAAATTAAATGTTGTTCATCTATGAGAGAGAGAGGATCATTAATGATTCAACTTTACATCAATGTGGTGCTTGACTAGTAGAAGTTACCCTGTGGAAGGGCTTAGGGTTTAGATGAGCAGGAGAGAAAAGTGAGAGAGATAGAGCTTGGCAGTTGCATAATGCATACCTTGTCTGAAATGCAGGTCTTACTTGTAGAAGCATGTTGTTTGGTTGGGTTGTTTAATATTGCATCAGGTGACCTAAAATTGTGAGTTGTGACAAGGTTTCGAGAACGTAGATGTAACTTTTGCAACCCATGATGTGGGAGACGGGGGTTCCATATAGTGATTTGGATTTGATTTGAGGACCTCTTATGTTGACAACTCTCAATTGGACTAGAGAGATTCCCTAATTGCAAAGGAAGTCTTCTCCAAAATTTTCCACTAAACTACATAGGCTAATGCAGCCTGCGGTAGAAATGCACGAGAAAAAGAACTCAAACGGATGTACCTTGCCCTCTTTAATTAGTGTTTGCAGTTGCTATAAGTTTTATTTTTAAAGCCTATGGTTGTAGAGAGCTTTGTATTTGTACGTTCAAAATATATTTTATGATCAAACATATTGATACTTTCTAACTCTTGGTTTGCTTTGAATACTTTGGTGCAATTGATTTTATATAACTGGCTAATTATTATTTGTTTCCTTGAAATTGAAAGCCACTTGGTGGAAGAACACGAAATGAGGGGCAAGCTCAAAGTGAGTTCTTTCATTCAGGCTTTTGTTCACCTTTGCATCAAGAACATTTTGATTTTGGTGATAGTGATGCTGTTCCGCATATGCTTCTTCAAATGGCTTTCTCTGTGTCATATGTCTTTTTCTAATTTCTATTGCTTAAAACCTTTCTAATATAGGTCCACCATCAAGGACATCAGGGAAAAAAAGACGCTTCAGGCCAGGGACAGTGGCATTGAGGGAAATTCGGCAACTCCAGAAGACATGGCATCTGCTAATTCCAGCTAGCAGTTTCATCCGAGCAGTGAGTTTGTTTTCTCCTTTTCAGTTGGACACAAGGACACCCTTGCATTTATGTTTTCACTAATTGCTTAATTACAAAATAACAGTAATAGGTATGGTCCGTTTAGAGACTCTGGACAAATGGAACTCCAATATTTGGATTCAAACTCCCTCCTGACAAGTACTTGTATCCTAGTTTATGGCACTTACATATAAAATGGTATTAATGCAGTTGAAGGATGCTATGCGATTGTTTAGATAGCCAATCTTTCATGTTTCCTATCTCATATTGAGATGGCTGCTTCTTTGCAATTACATTAGTCTTGGTGCATATATTCTTTTTTATAACAGTTTTTTTTTATACATTTCTGGGACTATTTCTTTTGGATGAAGATAGAACTTCAATCAAGCAATGTGGAACTACTAAAATACTGGAGCCACACAGAGAATGAATGGTCAGAAAAGTATACTTAATAACAAAAGAACCCCTATACTTACATTTACTAATAAAAACTTCAGTCATCCCATAATAAAAAAAGAAGGGGGAATACCAAGCAAAACTTAGTAGTTCAAACCCATGACAGGGTGTCGAAATCTGCTAAACCCCAGCCCTCGTGCCATCCACAAAATTCTTCTCTCTAGGCAAAGTTCCACAAGATAGCTAGACAACCAGCTTGCCAACCAGTTTGCCAAAAAGAATCCCCTTGTCCTCAAATGGGGCTTTGTTAATTTTGAGTTTTTAAAGAGAGAGAGCATCTTACTTGCTCATTTTGCAATTACTTAATATGTATTGCTTTTGAGGTTTGATAATGTGATGGTGATATTTTAAACCTTTGTAGGTGAAAGAAGTAAGCTACCAGTTAGCTCCACAGATTAGCCGTTGGCAAGCTGAAGCTTTAATAGCCCTTCAGGAAGTAATTACTTCTTTTTTATGGTCTGATTGAGCAAGCCTTGCTATATCTGTCAACATTAATGAGAATGATTATGTCTTCCACATTGTATAGACGAGGAAGCTACTTCTATTCCTATAAACTGCACTCTGTTTTCGCAATGGCATTGGGACTTTCAAGCTTATAATCTTTTTGATTGTCACCACTTGCAATGTTATCATGTCCAGCAGTTTGTTGACAGTATTTTAGCTATTTGTTAAGTATGTTTTAAATTTTTCTGGGAAGAATGCACTCTGCCAGATTCCCTTTTAATTGGTTGCTTGGCTGTGTTTGCCAAGGTGACCATGTGTAGCAAATTTTCTACTCTCCTAGAGTTAAAAGGATAAGTGACTCAGGATTTTGTCGCTATAATTTACTAAGATAATTGAACATGAGTTTCCTTTATGAAAATGTCCTTTGTTGTGTGAGTGTGTGTGTTTTCTCACTAGCTATTGTTTAATTCTTGATTGATATTAAAAGATTTTGGTCTCATGCTTTAACGTTTTGAAAATACCTTTTGTTCCCCAAAACTTTTCTGTTAAGGAACATAGTAGATATGTTGGTGATTTTAGTTTATTGCCTTGGGATTAGTGGTTTAAAGCAGCTTGTGTGTTTGTGTCTTTACTTCAATATCTAATTGTGCCTCTAGGAACCCAACTTAGTACTTGGGCAGTTTATTTTTAAGCTGATCTTGTTCTCATCTAGTTCAGACGATTAGATTTTGCACCATCCTTCAACTGTAAATTCTATTTCCGCTAGAAAACTTCAATCACATTGTTTCTAAAAGATGAGAACGAGGTGAAAGCATCAAAAGTTCTCATGTTTCCTTTTAAGCTCTGGTTTGGACTACTAGATTCCCACCCCCGCCCTCAAATTTTCTATCTACAAACACTTAAAGTTTGTTGAGTCATTGACACGCTTTGTCCTGTTGTCGATCCTTTTTTCTGTTATCTCAATTTATTCTTGTCCTGTATCTATTTAGTCATTGACCCACAGTTTTACTTCTATCTACTGCTGTAGCCTGTGGCTTTAAATACTTGGTGTTGTTTACAAAATATTATGAGTGAGTAAACTACCTTAATTTCACTTTGTATGTGCAATTATACTATTATCATTCTGTTTTTGAGTTGGTTTCTTCTGTTTTTGCTGTTACGTAGAAAAGATAAGTCAGTATAAACATCTACATCTTACTGACCTGATTGAGTTTTTGCTGTGTGCAATTTCACTTTGTATGTCCTGCTTCTGTGAAGGCTGGTTGTATTTTCAGAATTTGCTTTCATTTACGTTTTCTTAAGATCAAGTAAAACGGTACCATTAAACTTCTTGCATTTCTCCCATTTGTAGGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATGCAATGCTATGTGCTATTCATGCCAAACGTGTAACTCTCA

mRNA sequence

ATGGCGCGAGCCAGGCATCTAGCCCAAAGGAACGCAAATCGTACTGGAGTTGCATCGTCTTCCCCAGCTGGGCCGTCGACGCCACTTGGTGGAAGAACACGAAATGAGGGGCAAGCTCAAAGTCCACCATCAAGGACATCAGGGAAAAAAAGACGCTTCAGGCCAGGGACAGTGGCATTGAGGGAAATTCGGCAACTCCAGAAGACATGGCATCTGCTAATTCCAGCTAGCAGTTTCATCCGAGCAGTGAAAGAAGTAAGCTACCAGTTAGCTCCACAGATTAGCCGTTGGCAAGCTGAAGCTTTAATAGCCCTTCAGGAAGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATGCAATGCTATGTGCTATTCATGCCAAACGTGTAACTCTCA

Coding sequence (CDS)

ATGGCGCGAGCCAGGCATCTAGCCCAAAGGAACGCAAATCGTACTGGAGTTGCATCGTCTTCCCCAGCTGGGCCGTCGACGCCACTTGGTGGAAGAACACGAAATGAGGGGCAAGCTCAAAGTCCACCATCAAGGACATCAGGGAAAAAAAGACGCTTCAGGCCAGGGACAGTGGCATTGAGGGAAATTCGGCAACTCCAGAAGACATGGCATCTGCTAATTCCAGCTAGCAGTTTCATCCGAGCAGTGAAAGAAGTAAGCTACCAGTTAGCTCCACAGATTAGCCGTTGGCAAGCTGAAGCTTTAATAGCCCTTCAGGAAGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATGCAATGCTATGTGCTATTCATGCCAAACGTGTAACTCTCA

Protein sequence

MARARHLAQRNANRTGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPGTVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTLX

Homology

[Close]

BLAST of Sgr019828 vs. NCBI nr
Match: XP_022156549.1 (histone H3-like centromeric protein HTR12 [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 5.8e-54
Identity = 119/136 (87.50%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MARARHLAQRNANR----TGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARARH AQRNANR    +GVA SSPAGPSTPLGGRT+N  QAQSPP+RTSGKKRRFRPG
Sbjct: 1   MARARHPAQRNANRKPLGSGVAPSSPAGPSTPLGGRTQNVRQAQSPPARTSGKKRRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQ QKTW+LLIPASSFIRAVKEVSYQLAP+I+RWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQFQKTWNLLIPASSFIRAVKEVSYQLAPEITRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. NCBI nr
Match: XP_038896752.1 (histone H3-like centromeric protein HTR12 [Benincasa hispida])

HSP 1 Score: 198.7 bits (504), Expect = 3.1e-47
Identity = 108/136 (79.41%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 1   MARARHLAQRNANR----TGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARARH  QR +NR    TG A SSPA PSTPL GRT+N  QAQS P RT+ KK+RFRPG
Sbjct: 1   MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVALREIR LQK+W+LLIPAS FIRAVKEVSYQLAPQI+RWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. NCBI nr
Match: XP_022959605.1 (histone H3-like centromeric protein HTR12 [Cucurbita moschata] >XP_023005091.1 histone H3-like centromeric protein HTR12 [Cucurbita maxima] >XP_023514272.1 histone H3-like centromeric protein HTR12 [Cucurbita pepo subsp. pepo] >KAG6592914.1 histone H3-like centromeric protein HTR12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.7 bits (504), Expect = 3.1e-47
Identity = 107/136 (78.68%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MARARHLAQRNANR----TGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARA+H  QRN+NR     G + SS A PSTPL GRT++  Q QSP SRT+GKKRRFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQLQK+W+LLIPAS+FIRAVKEVSYQLAPQ++RWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. NCBI nr
Match: XP_011659153.1 (histone H3-like centromeric protein HTR12 isoform X2 [Cucumis sativus] >KAE8646217.1 hypothetical protein Csa_016289 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 5.4e-44
Identity = 103/136 (75.74%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 1   MARARHLAQRNANRT----GVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARARH  +R +NRT    G A SSP  PSTPL GRT+N  QAQ+  SRT  KK+RFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVAL+EIR LQK+W+LLIPAS FIRAVKEVS QLAPQI+RWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. NCBI nr
Match: XP_011659152.1 (histone H3-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 5.4e-44
Identity = 103/136 (75.74%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 1   MARARHLAQRNANRT----GVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARARH  +R +NRT    G A SSP  PSTPL GRT+N  QAQ+  SRT  KK+RFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVAL+EIR LQK+W+LLIPAS FIRAVKEVS QLAPQI+RWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. ExPASy Swiss-Prot
Match: Q8RVQ9 (Histone H3-like centromeric protein HTR12 OS=Arabidopsis thaliana OX=3702 GN=HTR12 PE=1 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-25
Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 1   MARARHLAQRNANR-----TGVASSSPAGPST---------------------PLGGRTR 60
           MAR +H   R+  R      G +SS  AGP+T                     P  G  R
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  NEGQAQSPPSRTSGKKR-RFRPGTVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLA-P 120
              +++    R S KK  R+RPGTVAL+EIR  QK  +LLIPA+SFIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
           QI+RW AEAL+ALQEAAED+LV LF D+MLCAIHA+RVTL
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTL 160

[Close]

BLAST of Sgr019828 vs. ExPASy Swiss-Prot
Match: Q7RXR3 (Histone H3-like centromeric protein hH3v OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=hH3v PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.6e-22
Identity = 60/117 (51.28%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 18  ASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPGTVALREIRQLQKTWHLLIPAS 77
           A++ P   +TP G R       Q       GKKRR+RPGT+AL+EIR  Q+T  LL+   
Sbjct: 18  AAAVPTPKATPPGRRKSRASSVQPGDPVPQGKKRRYRPGTLALKEIRNYQRTTDLLVAKL 77

Query: 78  SFIRAVKEVSYQLAP--QISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
            F R V+E++ Q  P  +  RWQ++A++ALQEAAE FLVHLFED  LCAIHAKRVT+
Sbjct: 78  PFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFEDTNLCAIHAKRVTI 134

[Close]

BLAST of Sgr019828 vs. ExPASy Swiss-Prot
Match: Q803H4 (Histone H3-like centromeric protein A OS=Danio rerio OX=7955 GN=cenpa PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 58/113 (51.33%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 20  SSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPGTVALREIRQLQKTWHLLIPASSF 79
           S PA    P G RTR       P   +  KK +FRPGT AL EIR+ QK+  LL+  + F
Sbjct: 19  SPPASLPPPAGSRTRRH---SGPSGSSPRKKHKFRPGTRALMEIRKYQKSTGLLLRKAPF 78

Query: 80  IRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
            R V+EV    + +   WQ  AL+ALQEAAE F+V LF DA LCAIHAKRVTL
Sbjct: 79  SRLVREVCQMFSREHMMWQGYALMALQEAAEAFMVRLFSDANLCAIHAKRVTL 128

[Close]

BLAST of Sgr019828 vs. ExPASy Swiss-Prot
Match: Q9Y812 (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cnp1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.1e-18
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 49  KKRRFRPGTVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQIS-----RWQAEALI 108
           +K+R+RPGT ALREIR+ Q++  LLI    F R V+E+S +     S     RWQ+ AL 
Sbjct: 18  RKKRYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQ 77

Query: 109 ALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
            LQEAAE FLVHLFED  LCAIHAKRVT+
Sbjct: 78  CLQEAAEAFLVHLFEDTNLCAIHAKRVTI 106

[Close]

BLAST of Sgr019828 vs. ExPASy Swiss-Prot
Match: Q59LN9 (Histone H3-like centromeric protein CSE4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CSE4 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.3e-18
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 50  KRRFRPGTVALREIRQLQKTWHLLIPASSFIRAVKEVSYQ-LAPQIS-RWQAEALIALQE 109
           K+R+RPGT ALREIRQ QK+  LLI    F R V+E+S   + P    RWQ+ A++ALQE
Sbjct: 109 KKRYRPGTKALREIRQYQKSTDLLIRKLPFARLVREISLDFVGPSYGLRWQSNAILALQE 168

Query: 110 AAEDFLVHLFEDAMLCAIHAKRVTL 133
           A+E FL+HL ED  LCAIHAKRVT+
Sbjct: 169 ASESFLIHLLEDTNLCAIHAKRVTI 193

[Close]

BLAST of Sgr019828 vs. ExPASy TrEMBL
Match: A0A6J1DTT5 (Histone H3.2 OS=Momordica charantia OX=3673 GN=LOC111023426 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 119/136 (87.50%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MARARHLAQRNANR----TGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARARH AQRNANR    +GVA SSPAGPSTPLGGRT+N  QAQSPP+RTSGKKRRFRPG
Sbjct: 1   MARARHPAQRNANRKPLGSGVAPSSPAGPSTPLGGRTQNVRQAQSPPARTSGKKRRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQ QKTW+LLIPASSFIRAVKEVSYQLAP+I+RWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQFQKTWNLLIPASSFIRAVKEVSYQLAPEITRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. ExPASy TrEMBL
Match: A0A6J1KTZ4 (Histone H3.2 OS=Cucurbita maxima OX=3661 GN=LOC111498182 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.5e-47
Identity = 107/136 (78.68%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MARARHLAQRNANR----TGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARA+H  QRN+NR     G + SS A PSTPL GRT++  Q QSP SRT+GKKRRFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQLQK+W+LLIPAS+FIRAVKEVSYQLAPQ++RWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. ExPASy TrEMBL
Match: A0A6J1H6R9 (Histone H3.2 OS=Cucurbita moschata OX=3662 GN=LOC111460630 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.5e-47
Identity = 107/136 (78.68%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MARARHLAQRNANR----TGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARA+H  QRN+NR     G + SS A PSTPL GRT++  Q QSP SRT+GKKRRFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVALREIRQLQK+W+LLIPAS+FIRAVKEVSYQLAPQ++RWQAEALIALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. ExPASy TrEMBL
Match: A0A0A0K4F4 (Histone H3.2 OS=Cucumis sativus OX=3659 GN=Csa_7G328280 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.6e-44
Identity = 103/136 (75.74%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 1   MARARHLAQRNANRT----GVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPG 60
           MARARH  +R +NRT    G A SSP  PSTPL GRT+N  QAQ+  SRT  KK+RFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHL 120
           TVAL+EIR LQK+W+LLIPAS FIRAVKEVS QLAPQI+RWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDAMLCAIHAKRVTL 133
           FED MLCAIHAKRVT+
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]

BLAST of Sgr019828 vs. ExPASy TrEMBL
Match: B7XEI8 (Centromere specific histone H3 variant OS=Nicotiana sylvestris OX=4096 GN=NsCENH3 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 7.1e-34
Identity = 90/142 (63.38%), Postives = 105/142 (73.94%), Query Frame = 0


Query: 1   MARARHLAQRNANR----------TGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKK 60
           MAR +HLA R  +R             A+SS A  STP   RT ++  A S P RT  KK
Sbjct: 1   MARTKHLALRKQSRPPSRPTATRSAAAAASSSAPQSTPT--RT-SQRTAPSTPGRTQKKK 60

Query: 61  RRFRPGTVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAE 120
            R+RPGTVALREIR+ QKTW+LLIPA+ FIR VKE+SY  AP+++RWQAEALIALQEAAE
Sbjct: 61  TRYRPGTVALREIRRFQKTWNLLIPAAPFIRLVKEISYFFAPEVTRWQAEALIALQEAAE 120

Query: 121 DFLVHLFEDAMLCAIHAKRVTL 133
           DFLVHLF+D+MLCAIHAKRVTL
Sbjct: 121 DFLVHLFDDSMLCAIHAKRVTL 139

[Close]

BLAST of Sgr019828 vs. TAIR 10
Match: AT1G01370.1 (Histone superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 1   MARARHLAQRNANR-----TGVASSSPAGPST---------------------PLGGRTR 60
           MAR +H   R+  R      G +SS  AGP+T                     P  G  R
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  NEGQAQSPPSRTSGKKR-RFRPGTVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLA-P 120
              +++    R S KK  R+RPGTVAL+EIR  QK  +LLIPA+SFIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
           QI+RW AEAL+ALQEAAED+LV LF D+MLCAIHA+RVTL
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTL 160

[Close]

BLAST of Sgr019828 vs. TAIR 10
Match: AT1G01370.2 (Histone superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 1   MARARHLAQRNANR-----TGVASSSPAGPST---------------------PLGGRTR 60
           MAR +H   R+  R      G +SS  AGP+T                     P  G  R
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  NEGQAQSPPSRTSGKKR-RFRPGTVALREIRQLQKTWHLLIPASSFIRAVKEVSYQLA-P 120
              +++    R S KK  R+RPGTVAL+EIR  QK  +LLIPA+SFIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
           QI+RW AEAL+ALQEAAED+LV LF D+MLCAIHA+RVTL
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTL 160

[Close]

BLAST of Sgr019828 vs. TAIR 10
Match: AT1G09200.1 (Histone superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-16
Identity = 54/119 (45.38%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 14  RTGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPGTVALREIRQLQKTWHLL 73
           RT   +    G   P         +  +P +    K  RFRPGTVALREIR+ QK+  LL
Sbjct: 3   RTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELL 62

Query: 74  IPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
           I    F R V+E++      + R+Q+ A+ ALQEAAE +LV LFED  LCAIHAKRVT+
Sbjct: 63  IRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

[Close]

BLAST of Sgr019828 vs. TAIR 10
Match: AT3G27360.1 (Histone superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-16
Identity = 54/119 (45.38%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 14  RTGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPGTVALREIRQLQKTWHLL 73
           RT   +    G   P         +  +P +    K  RFRPGTVALREIR+ QK+  LL
Sbjct: 3   RTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELL 62

Query: 74  IPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
           I    F R V+E++      + R+Q+ A+ ALQEAAE +LV LFED  LCAIHAKRVT+
Sbjct: 63  IRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

[Close]

BLAST of Sgr019828 vs. TAIR 10
Match: AT4G40030.1 (Histone superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-16
Identity = 53/119 (44.54%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 14  RTGVASSSPAGPSTPLGGRTRNEGQAQSPPSRTSGKKRRFRPGTVALREIRQLQKTWHLL 73
           RT   +    G   P         +  +P +    K  R+RPGTVALREIR+ QK+  LL
Sbjct: 3   RTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELL 62

Query: 74  IPASSFIRAVKEVSYQLAPQISRWQAEALIALQEAAEDFLVHLFEDAMLCAIHAKRVTL 133
           I    F R V+E++      + R+Q+ A++ALQEAAE +LV LFED  LCAIHAKRVT+
Sbjct: 63  IRKLPFQRLVREIAQDFKTDL-RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

The following BLAST results are available for this feature:

BLAST of Sgr019828 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156549.1	5.8e-54	87.50	histone H3-like centromeric protein HTR12 [Momordica charantia]	[more]
XP_038896752.1	3.1e-47	79.41	histone H3-like centromeric protein HTR12 [Benincasa hispida]	[more]
XP_022959605.1	3.1e-47	78.68	histone H3-like centromeric protein HTR12 [Cucurbita moschata] >XP_023005091.1 h...	[more]
XP_011659153.1	5.4e-44	75.74	histone H3-like centromeric protein HTR12 isoform X2 [Cucumis sativus] >KAE86462...	[more]
XP_011659152.1	5.4e-44	75.74	histone H3-1 isoform X1 [Cucumis sativus]	[more]

BLAST of Sgr019828 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RVQ9	2.6e-25	48.75	Histone H3-like centromeric protein HTR12 OS=Arabidopsis thaliana OX=3702 GN=HTR...	[more]
Q7RXR3	4.6e-22	51.28	Histone H3-like centromeric protein hH3v OS=Neurospora crassa (strain ATCC 24698...	[more]
Q803H4	1.8e-18	51.33	Histone H3-like centromeric protein A OS=Danio rerio OX=7955 GN=cenpa PE=1 SV=1	[more]
Q9Y812	4.1e-18	57.30	Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q59LN9	5.3e-18	58.82	Histone H3-like centromeric protein CSE4 OS=Candida albicans (strain SC5314 / AT...	[more]

BLAST of Sgr019828 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTT5	2.8e-54	87.50	Histone H3.2 OS=Momordica charantia OX=3673 GN=LOC111023426 PE=3 SV=1	[more]
A0A6J1KTZ4	1.5e-47	78.68	Histone H3.2 OS=Cucurbita maxima OX=3661 GN=LOC111498182 PE=3 SV=1	[more]
A0A6J1H6R9	1.5e-47	78.68	Histone H3.2 OS=Cucurbita moschata OX=3662 GN=LOC111460630 PE=3 SV=1	[more]
A0A0A0K4F4	2.6e-44	75.74	Histone H3.2 OS=Cucumis sativus OX=3659 GN=Csa_7G328280 PE=3 SV=1	[more]
B7XEI8	7.1e-34	63.38	Centromere specific histone H3 variant OS=Nicotiana sylvestris OX=4096 GN=NsCENH...	[more]

BLAST of Sgr019828 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01370.1	1.9e-26	48.75	Histone superfamily protein	[more]
AT1G01370.2	1.9e-26	48.75	Histone superfamily protein	[more]
AT1G09200.1	3.9e-16	45.38	Histone superfamily protein	[more]
AT3G27360.1	3.9e-16	45.38	Histone superfamily protein	[more]
AT4G40030.1	3.9e-16	44.54	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 110..126 score: 69.57 coord: 92..110 score: 48.4 coord: 45..66 score: 58.6 coord: 126..132 score: 26.28 coord: 14..28 score: 26.23
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 45..132 e-value: 3.8E-26 score: 102.9
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 10..132
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 17..132 e-value: 1.1E-26 score: 93.8
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..132 e-value: 1.1E-37 score: 130.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 21..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	PANTHER	PTHR11426:SF223	HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12	coord: 10..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr019828.1	Sgr019828.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0006996	organelle organization
cellular_component	GO:0016020	membrane
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity