Sgr019598 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019598
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	polyadenylate-binding protein RBP45-like
Location	tig00153349: 259065 .. 261859 (+)
RNA-Seq Expression	Sgr019598
Synteny	Sgr019598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGCCTCTCCTGGAAGATCTTGGCACCGTAATCTCCAAAACTCCATTCTCGAATCCAGCTGAAATTGCATCTACATCAACCAGAACCGGAAGCCGAAACTTCCTCGAGAAGCTCTTCGCAGGCTCCGAAACTCCATCGACAGCCTCGGTCCGAATAATCAGGTACCGCGAATCCTCAACCTCCACTTTTATCTCCTCTTTCCTAACACCTGCGCATCAAAGCGAACCAGAAAAAAAAAAAGGTTGATAAATTGAGAAAATAAATGCGCACGAGAAATCTAGAACTAGAAAGGGATTGGAATTACCGGGCAGAGCGGCCGAGAAAATATGAGACTCGGGGGTTTGTACCCAGTGCACATAGTTCTGAGGAATGGTGTAATGGTAGTAGGGAAAGAGGAGATGAGGAGTAAATGGGTGTGCAGGGAAGGACGATGAGAGCTCGAAATCTCCATTGTTGCTTCTCAGAAGAAGTTTTTTGTTTGCGGTTTTGGCGGGCCGAGTGAGAGTGGATTACCTCTCGCGATGATTAGCTTTAAATAGAAGATTGGATCTTTTTGGCCCGAAGCCAAGTTGCAGAGCAGCTAAAAGATTAAAGGCATTTTCGGCAAAGTACGAACAATTGAGTTTTTTTTTTTTTTTCATGAATAAAATGAAATGAGTCGATTTATTTATTCGCGGGAAAGGGTGGGTGACAAATGAGAATTTTGATATATTTTTAGTTAAAATTAATGTTGATGTGATAAATATTAAAATGGACTAAAATATCCAAATGATCCTCCAAAGTAAACCGATCTTGTCTGGGTGTAAGAAATGGAATCAAACTAATTATACCAGACAAAACCAATATATTTAGCTGAGTGATTAATATTGATTAAGTTAGAAATAAAATAGGAAATAAAAAAAAAAAGTGACGATCAAAATCGACATTAGTGAGTACTAATTAATAGTTGAGTTTATAATATCAAAATATTGATTATCTTAACATTAAAAATTAAGCAAAAAAAACTCCAACTTCTCCTTTTCTTTTTATCCTCGCCATTAATAACCACTTCTCTCAACCCTTCAACTATTGTTGTCTGTTTGGTGGATTGATTGCAAATTGCATTGTAACATAAATAATTTTATTTGTAAAATTTGAACACTTAGTTAATATAGTGATAAGGCTCCAACCAATTTTTGGGCTTACATCAAATCAATAAAAATGAAATTAATTAAAAATATTTAAATAAAACTATATAAGATGGAATAGGTGGATATGTAGAGGCTAAAACTCACCCAGCACCGATTGATGACCCTAAGATATCATCGAATTCACTCTACGCCGTAGACTAAACCCTCTCCTATTTGAAAGTAGGAATCAAGATAGCTTTGGCCAACCGAAAGAAAATAGAATGGACCCTTAGTCAAAATATTTTTAAAAGACATTTCCATTGTATCAGGCATTTGTTAACTTCTAATTATTTTGTTTTATTTTATTTTAACTTGATAGTTAGAGTGTCTTAATCGTGACACATGATCACCATCTAACTCCAGCTATATTTTCAGTATCTATAAAATACTTCAATTGAGATGGAATTTAAATTTTTAATTTTTTTTTACAAAACTGCTTTGATTCACATTCACAAGGCATTGATGACAATGAAAAAGGCGACAGGTTCCTGTGAGGTCGATATGATTTAAATTTGCATGAACTCGGTGGTTGATTGGCCCGTTTTAGAAGATGTTGGCCAGTTGATGGACAGATATGTGGGGCCAAATTCTAAAAATCACAGCCTCAACGCCTTCGGATAACGTGTCTTATGCAATTGAGATAAAATCTCAGCAATCCCATCGTTTCGTTTCCCTCTCTCGCGGCTTGCCTGCTTCCGACATCTAGGGTTAGGGTTTCTCAGGATTAAACGAGATCCCCAAACTCTTTTCTCTCTCTGACATTTTGAAATTCTTTGTCCGCCTTATTTTTTGATACGATGCAGCCTGCACCTGGTGTTGCCCCGCACAACGTGCCCCATCAAGCCCCGCAGTACCAGCAGCCGCAGCCGCAGCCGCCTTACATGATGATGCCTCCTCAGCCGCCTCAAGTTCAGCCTGGGCCTCAGATGTGGCCTCAGCAGCTCCAGGCGGCCTCACCGCAGGTTCAACCGACTCAACCAGCCAGCGGGGACGAGGTCCGTACGCTCTGGATTGGGGACCTCCAATATTGGATGGACGAAAGCTATCTTTTTGGTTGTTTTGCTCATACTGGCGAGGTACGCGAGATTATTCCAACTTAGTTGAGATTTGGTCATTTATCATGGGCTGATCTTTGTCGGGGGTCTTTTATTATTGGTCGGATTTTAAATGGTTTTGTACGTAACTGAATTGAAGGAAGTGGTTACGATCTCATTTTTGTTGGAATTAAGAATGTTTATGTGGCAGGTTTCATCGGTTAAAGTCATTCGGAACAAGCAAACAGGTCAGTCCGAGGGTTACGGCTTTATTGAGTTTTTAACACGTCCAGCTGCAGAAAGAGTACTGCAAACATATAATGGAACCCCGATGCCAAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGGCAAGATGACACTCCCGATTATACAATTTTCGTAGGGGACTTGGCTGGTGATGTTACAGATTACGTGCTACAAGAGACATTTAGGGCGCGTTACACCTCTGTTAAGGGTGCCAAAGTTGTGATCGATAGGCTCACTGGACGGACTAAAGGTTATGGTTTTGTGAAGTTGGAGATGAGACTGAACAAATGCGTGCAATGA

mRNA sequence

ATGAAGGAGCCTCTCCTGGAAGATCTTGGCACCGTAATCTCCAAAACTCCATTCTCGAATCCAGCTGAAATTGCATCTACATCAACCAGAACCGGAAGCCGAAACTTCCTCGAGAAGCTCTTCGCAGGCTCCGAAACTCCATCGACAGCCTCGGTCCGAATAATCAGAAATCTAGAACTAGAAAGGGATTGGAATTACCGGGCAGAGCGGCCGAGAAAATATGAGACTCGGGGGTTTGTACCCAGTGCACATAGTTCTGAGGAATGGTGTAATGGGAAGGACGATGAGAGCTCGAAATCTCCATTGTTGCTTCTCAGAAGAAGTTTTTTGTTTGCGGTTTTGGCGGGCCGACCTGCACCTGGTGTTGCCCCGCACAACGTGCCCCATCAAGCCCCGCAGTACCAGCAGCCGCAGCCGCAGCCGCCTTACATGATGATGCCTCCTCAGCCGCCTCAAGTTCAGCCTGGGCCTCAGATGTGGCCTCAGCAGCTCCAGGCGGCCTCACCGCAGGTTCAACCGACTCAACCAGCCAGCGGGGACGAGGTCCGTACGCTCTGGATTGGGGACCTCCAATATTGGATGGACGAAAGCTATCTTTTTGGTTGTTTTGCTCATACTGGCGAGGTTTCATCGGTTAAAGTCATTCGGAACAAGCAAACAGGTCAGTCCGAGGGTTACGGCTTTATTGAGTTTTTAACACGTCCAGCTGCAGAAAGAGTACTGCAAACATATAATGGAACCCCGATGCCAAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGGCAAGATGACACTCCCGATTATACAATTTTCGTAGGGGACTTGGCTGGTGATGTTACAGATTACGTGCTACAAGAGACATTTAGGGCGCGTTACACCTCTGTTAAGGGTGCCAAAGTTGTGATCGATAGGCTCACTGGACGGACTAAAGGTTATGGTTTTGTGAAGTTGGAGATGAGACTGAACAAATGCGTGCAATGA

Coding sequence (CDS)

ATGAAGGAGCCTCTCCTGGAAGATCTTGGCACCGTAATCTCCAAAACTCCATTCTCGAATCCAGCTGAAATTGCATCTACATCAACCAGAACCGGAAGCCGAAACTTCCTCGAGAAGCTCTTCGCAGGCTCCGAAACTCCATCGACAGCCTCGGTCCGAATAATCAGAAATCTAGAACTAGAAAGGGATTGGAATTACCGGGCAGAGCGGCCGAGAAAATATGAGACTCGGGGGTTTGTACCCAGTGCACATAGTTCTGAGGAATGGTGTAATGGGAAGGACGATGAGAGCTCGAAATCTCCATTGTTGCTTCTCAGAAGAAGTTTTTTGTTTGCGGTTTTGGCGGGCCGACCTGCACCTGGTGTTGCCCCGCACAACGTGCCCCATCAAGCCCCGCAGTACCAGCAGCCGCAGCCGCAGCCGCCTTACATGATGATGCCTCCTCAGCCGCCTCAAGTTCAGCCTGGGCCTCAGATGTGGCCTCAGCAGCTCCAGGCGGCCTCACCGCAGGTTCAACCGACTCAACCAGCCAGCGGGGACGAGGTCCGTACGCTCTGGATTGGGGACCTCCAATATTGGATGGACGAAAGCTATCTTTTTGGTTGTTTTGCTCATACTGGCGAGGTTTCATCGGTTAAAGTCATTCGGAACAAGCAAACAGGTCAGTCCGAGGGTTACGGCTTTATTGAGTTTTTAACACGTCCAGCTGCAGAAAGAGTACTGCAAACATATAATGGAACCCCGATGCCAAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGGCAAGATGACACTCCCGATTATACAATTTTCGTAGGGGACTTGGCTGGTGATGTTACAGATTACGTGCTACAAGAGACATTTAGGGCGCGTTACACCTCTGTTAAGGGTGCCAAAGTTGTGATCGATAGGCTCACTGGACGGACTAAAGGTTATGGTTTTGTGAAGTTGGAGATGAGACTGAACAAATGCGTGCAATGA

Protein sequence

MKEPLLEDLGTVISKTPFSNPAEIASTSTRTGSRNFLEKLFAGSETPSTASVRIIRNLELERDWNYRAERPRKYETRGFVPSAHSSEEWCNGKDDESSKSPLLLLRRSFLFAVLAGRPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVKLEMRLNKCVQ

Homology

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BLAST of Sgr019598 vs. NCBI nr
Match: XP_022139915.1 (polyadenylate-binding protein RBP45-like isoform X2 [Momordica charantia])

HSP 1 Score: 402.5 bits (1033), Expect = 3.5e-108
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 117 RPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQP 176
           +PAPGVAPH+VPHQAPQYQQPQ QPPYMMMPPQ PQVQPGPQMWPQQL AASPQVQPTQP
Sbjct: 2   QPAPGVAPHSVPHQAPQYQQPQGQPPYMMMPPQQPQVQPGPQMWPQQLPAASPQVQPTQP 61

Query: 177 ASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 236
           ASGDEVRTLWIGDLQYWMDE+YL+ CFAHTGEVSSVKVIRNKQT QSEGYGFIEFLTRPA
Sbjct: 62  ASGDEVRTLWIGDLQYWMDENYLYNCFAHTGEVSSVKVIRNKQTAQSEGYGFIEFLTRPA 121

Query: 237 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 296
           AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA
Sbjct: 122 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 181

Query: 297 RYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RYTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 182 RYTSVKGAKVVIDRLTGRTKGYGFVK 207

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BLAST of Sgr019598 vs. NCBI nr
Match: XP_022139914.1 (polyadenylate-binding protein RBP45-like isoform X1 [Momordica charantia])

HSP 1 Score: 402.5 bits (1033), Expect = 3.5e-108
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 117 RPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQP 176
           +PAPGVAPH+VPHQAPQYQQPQ QPPYMMMPPQ PQVQPGPQMWPQQL AASPQVQPTQP
Sbjct: 2   QPAPGVAPHSVPHQAPQYQQPQGQPPYMMMPPQQPQVQPGPQMWPQQLPAASPQVQPTQP 61

Query: 177 ASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 236
           ASGDEVRTLWIGDLQYWMDE+YL+ CFAHTGEVSSVKVIRNKQT QSEGYGFIEFLTRPA
Sbjct: 62  ASGDEVRTLWIGDLQYWMDENYLYNCFAHTGEVSSVKVIRNKQTAQSEGYGFIEFLTRPA 121

Query: 237 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 296
           AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA
Sbjct: 122 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 181

Query: 297 RYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RYTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 182 RYTSVKGAKVVIDRLTGRTKGYGFVK 207

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BLAST of Sgr019598 vs. NCBI nr
Match: XP_022139916.1 (polyadenylate-binding protein RBP45-like isoform X3 [Momordica charantia])

HSP 1 Score: 402.5 bits (1033), Expect = 3.5e-108
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 117 RPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQP 176
           +PAPGVAPH+VPHQAPQYQQPQ QPPYMMMPPQ PQVQPGPQMWPQQL AASPQVQPTQP
Sbjct: 2   QPAPGVAPHSVPHQAPQYQQPQGQPPYMMMPPQQPQVQPGPQMWPQQLPAASPQVQPTQP 61

Query: 177 ASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 236
           ASGDEVRTLWIGDLQYWMDE+YL+ CFAHTGEVSSVKVIRNKQT QSEGYGFIEFLTRPA
Sbjct: 62  ASGDEVRTLWIGDLQYWMDENYLYNCFAHTGEVSSVKVIRNKQTAQSEGYGFIEFLTRPA 121

Query: 237 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 296
           AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA
Sbjct: 122 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 181

Query: 297 RYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RYTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 182 RYTSVKGAKVVIDRLTGRTKGYGFVK 207

[Close]

BLAST of Sgr019598 vs. NCBI nr
Match: XP_038894238.1 (polyadenylate-binding protein RBP45-like isoform X1 [Benincasa hispida])

HSP 1 Score: 384.4 bits (986), Expect = 9.8e-103
Identity = 189/206 (91.75%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 117 RPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQP 176
           +PAPGVAPHN+PHQAPQYQ  Q QPPYMMMPPQPPQ QP PQMWPQQ QA SPQ QP QP
Sbjct: 2   QPAPGVAPHNMPHQAPQYQ--QQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQP 61

Query: 177 ASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 236
           AS DEVRTLWIGDLQYWMDE+YLF CFAHTGE+SSVKVIRNKQTGQSEGYGF+EFLTRPA
Sbjct: 62  ASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPA 121

Query: 237 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 296
           AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDD+PDYTIFVGDLAGDVTDYVLQETFRA
Sbjct: 122 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRA 181

Query: 297 RYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RYTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 182 RYTSVKGAKVVIDRLTGRTKGYGFVK 205

[Close]

BLAST of Sgr019598 vs. NCBI nr
Match: XP_038894239.1 (polyadenylate-binding protein RBP45-like isoform X2 [Benincasa hispida])

HSP 1 Score: 384.4 bits (986), Expect = 9.8e-103
Identity = 189/206 (91.75%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 117 RPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQP 176
           +PAPGVAPHN+PHQAPQYQ  Q QPPYMMMPPQPPQ QP PQMWPQQ QA SPQ QP QP
Sbjct: 2   QPAPGVAPHNMPHQAPQYQ--QQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQP 61

Query: 177 ASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 236
           AS DEVRTLWIGDLQYWMDE+YLF CFAHTGE+SSVKVIRNKQTGQSEGYGF+EFLTRPA
Sbjct: 62  ASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPA 121

Query: 237 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 296
           AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDD+PDYTIFVGDLAGDVTDYVLQETFRA
Sbjct: 122 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRA 181

Query: 297 RYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RYTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 182 RYTSVKGAKVVIDRLTGRTKGYGFVK 205

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BLAST of Sgr019598 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 6.1e-63
Identity = 137/208 (65.87%), Postives = 157/208 (75.48%), Query Frame = 0


Query: 118 PAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPA 177
           P  G+ PH+ P  + Q QQ   Q PY +    PP     PQMW  Q  AA P VQPT   
Sbjct: 6   PPGGILPHHAPPPSAQ-QQYGYQQPYGIAGAAPPP----PQMWNPQ-AAAPPSVQPT--- 65

Query: 178 SGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 237
           + DE+RTLWIGDLQYWMDE++L+GCFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  AA
Sbjct: 66  TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 125

Query: 238 ERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETF 297
           ERVLQT+N  P+P+   Q FRLNWA  S+G+KR DD+PDYTIFVGDLA DVTDY+L ETF
Sbjct: 126 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETF 185

Query: 298 RARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RA Y SVKGAKVVIDR+TGRTKGYGFV+
Sbjct: 186 RASYPSVKGAKVVIDRVTGRTKGYGFVR 203

[Close]

BLAST of Sgr019598 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-62
Identity = 132/210 (62.86%), Postives = 150/210 (71.43%), Query Frame = 0


Query: 115 AGRPAP--GVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQ 174
           AG+P     + P   PH   QY  P PQ P  M    PPQ   G    PQ   AA P   
Sbjct: 23  AGQPPQWGAIPPPMPPH---QYGAPPPQQPPAMWGQPPPQAHYGQVPPPQPYYAAPPPQA 82

Query: 175 PTQPASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFL 234
              PA+ DEV+TLWIGDLQ WMDESY++ CFA TGEV SVK+IR+KQ+GQ +GYGF+EF 
Sbjct: 83  MPAPAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFT 142

Query: 235 TRPAAERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQE 294
           +R AA+R+LQTYNG  MPN    FRLNWASAGEKR DDTPDYTIFVGDLA DVTDY+LQE
Sbjct: 143 SRAAADRILQTYNGQMMPNVEMVFRLNWASAGEKR-DDTPDYTIFVGDLAADVTDYLLQE 202

Query: 295 TFRARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           TFR  Y SVKGAKVV D++T R+KGYGFVK
Sbjct: 203 TFRVHYPSVKGAKVVTDKMTMRSKGYGFVK 228

[Close]

BLAST of Sgr019598 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.8e-59
Identity = 128/220 (58.18%), Postives = 155/220 (70.45%), Query Frame = 0


Query: 115 AGRPAPGVAPHNVPHQAPQYQQPQP--QPPYMMMPPQPPQVQPGPQMWPQQLQAASPQ-- 174
           +G   P +AP ++     Q Q P P  Q  +MM P QP Q Q  PQ  P   Q  S Q  
Sbjct: 5   SGVAQPPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQQPSQQQY 64

Query: 175 -------VQPTQPASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQS 234
                    P+   + +EVR+LWIGDLQYWMDE+YL  CF HTGE+ S KVIRNKQTGQS
Sbjct: 65  GAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQS 124

Query: 235 EGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGE-KRQDDTPDYTIFVGDLA 294
           EGYGF+EF +  AAE +LQTYNGT MPN  QNFR+NWAS G  +R+DD+ ++TIFVGDLA
Sbjct: 125 EGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHTIFVGDLA 184

Query: 295 GDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVK 323
            DVTDY+LQETF++ Y+SV+GAKVV DR+TGR+KGYGFVK
Sbjct: 185 ADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVK 224

[Close]

BLAST of Sgr019598 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.1e-54
Identity = 114/180 (63.33%), Postives = 129/180 (71.67%), Query Frame = 0


Query: 144 MMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPASGDEVRTLWIGDLQYWMDESYLFGCF 203
           MM PPQPPQ   G    PQ L               +EVRTLWIGDLQYW+DE+YL  CF
Sbjct: 3   MMHPPQPPQ---GSYHHPQTL---------------EEVRTLWIGDLQYWVDENYLTSCF 62

Query: 204 AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASA 263
           + TGE+ SVKVIRNK TGQ EGYGFIEF++  AAER LQTYNGT MP     FRLNWAS 
Sbjct: 63  SQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASF 122

Query: 264 GE-KRQDDTPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           G  ++ D  PD++IFVGDLA DVTDY+LQETFR  Y+SV+GAKVV D  TGR+KGYGFVK
Sbjct: 123 GSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVK 164

[Close]

BLAST of Sgr019598 vs. ExPASy Swiss-Prot
Match: Q93W34 (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.7e-52
Identity = 120/207 (57.97%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 128 PHQAPQYQQP--QPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQ--------PA 187
           P Q P  QQ   Q Q  +MM   Q  Q QP P  W QQ   +S Q Q  Q        P 
Sbjct: 16  PGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQQQYGGGGSQNPG 75

Query: 188 SGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 247
           S  E+R+LWIGDLQ WMDE+YL   F  TGE ++ KVIRNKQ G SEGYGFIEF+    A
Sbjct: 76  SAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATA 135

Query: 248 ERVLQTYNGTPMPNGAQNFRLNWA--SAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFR 307
           ER LQTYNG PMP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA DVTD++L ETF+
Sbjct: 136 ERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFK 195

Query: 308 ARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           A Y+SVKGAKVV DR TGR+KGYGFV+
Sbjct: 196 AVYSSVKGAKVVNDRTTGRSKGYGFVR 221

[Close]

BLAST of Sgr019598 vs. ExPASy TrEMBL
Match: A0A6J1CE43 (polyadenylate-binding protein RBP45-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010714 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.7e-108
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 117 RPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQP 176
           +PAPGVAPH+VPHQAPQYQQPQ QPPYMMMPPQ PQVQPGPQMWPQQL AASPQVQPTQP
Sbjct: 2   QPAPGVAPHSVPHQAPQYQQPQGQPPYMMMPPQQPQVQPGPQMWPQQLPAASPQVQPTQP 61

Query: 177 ASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 236
           ASGDEVRTLWIGDLQYWMDE+YL+ CFAHTGEVSSVKVIRNKQT QSEGYGFIEFLTRPA
Sbjct: 62  ASGDEVRTLWIGDLQYWMDENYLYNCFAHTGEVSSVKVIRNKQTAQSEGYGFIEFLTRPA 121

Query: 237 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 296
           AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA
Sbjct: 122 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 181

Query: 297 RYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RYTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 182 RYTSVKGAKVVIDRLTGRTKGYGFVK 207

[Close]

BLAST of Sgr019598 vs. ExPASy TrEMBL
Match: A0A6J1CEA6 (polyadenylate-binding protein RBP45-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010714 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.7e-108
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 117 RPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQP 176
           +PAPGVAPH+VPHQAPQYQQPQ QPPYMMMPPQ PQVQPGPQMWPQQL AASPQVQPTQP
Sbjct: 2   QPAPGVAPHSVPHQAPQYQQPQGQPPYMMMPPQQPQVQPGPQMWPQQLPAASPQVQPTQP 61

Query: 177 ASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 236
           ASGDEVRTLWIGDLQYWMDE+YL+ CFAHTGEVSSVKVIRNKQT QSEGYGFIEFLTRPA
Sbjct: 62  ASGDEVRTLWIGDLQYWMDENYLYNCFAHTGEVSSVKVIRNKQTAQSEGYGFIEFLTRPA 121

Query: 237 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 296
           AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA
Sbjct: 122 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 181

Query: 297 RYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RYTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 182 RYTSVKGAKVVIDRLTGRTKGYGFVK 207

[Close]

BLAST of Sgr019598 vs. ExPASy TrEMBL
Match: A0A6J1CDL7 (polyadenylate-binding protein RBP45-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010714 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.7e-108
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 117 RPAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQP 176
           +PAPGVAPH+VPHQAPQYQQPQ QPPYMMMPPQ PQVQPGPQMWPQQL AASPQVQPTQP
Sbjct: 2   QPAPGVAPHSVPHQAPQYQQPQGQPPYMMMPPQQPQVQPGPQMWPQQLPAASPQVQPTQP 61

Query: 177 ASGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 236
           ASGDEVRTLWIGDLQYWMDE+YL+ CFAHTGEVSSVKVIRNKQT QSEGYGFIEFLTRPA
Sbjct: 62  ASGDEVRTLWIGDLQYWMDENYLYNCFAHTGEVSSVKVIRNKQTAQSEGYGFIEFLTRPA 121

Query: 237 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 296
           AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA
Sbjct: 122 AERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRA 181

Query: 297 RYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RYTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 182 RYTSVKGAKVVIDRLTGRTKGYGFVK 207

[Close]

BLAST of Sgr019598 vs. ExPASy TrEMBL
Match: A0A0A0LX40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063550 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.5e-104
Identity = 201/238 (84.45%), Postives = 208/238 (87.39%), Query Frame = 0


Query: 86  SEEWCNGKDDESSKSPLLLLRRSFLFAVL-AGRPAPGVAPHNVPHQAPQYQQPQPQPPYM 145
           SE+  N K +     P LLL  S LFA   A RPAPGVAPHN+PHQAPQYQ  Q QPPYM
Sbjct: 73  SEKKKNDKSNRFLPIPFLLL--SSLFASFSASRPAPGVAPHNIPHQAPQYQ--QQQPPYM 132

Query: 146 MMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPASGDEVRTLWIGDLQYWMDESYLFGCFA 205
           MM PQPPQ QP PQMWPQQ QA SPQ QP QPA+GDEVRTLWIGDLQYWMDE+Y+F CFA
Sbjct: 133 MMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFA 192

Query: 206 HTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAG 265
           HTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGT MPNGAQNFRLNWASAG
Sbjct: 193 HTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAG 252

Query: 266 EKRQDDTPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           EKRQDD+PDYTIFVGDLAGDVTDYVLQETFRARY SVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 253 EKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVK 306

[Close]

BLAST of Sgr019598 vs. ExPASy TrEMBL
Match: A0A6J1CDX8 (polyadenylate-binding protein RBP45-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010786 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 2.4e-102
Identity = 188/205 (91.71%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 118 PAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPA 177
           PAPGVAPHN+PHQAPQYQ  Q QPPYMMMPPQPPQ QP PQMWPQQ Q  SPQ QP QPA
Sbjct: 3   PAPGVAPHNMPHQAPQYQ--QQQPPYMMMPPQPPQAQPVPQMWPQQPQVGSPQGQPPQPA 62

Query: 178 SGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 237
           + DEVRTLWIGDLQYWMDE+YL+ CFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 63  NADEVRTLWIGDLQYWMDENYLYNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 122

Query: 238 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFRAR 297
           ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDD+PDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 123 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 182

Query: 298 YTSVKGAKVVIDRLTGRTKGYGFVK 323
           YTSVKGAKVVIDRLTGRTKGYGFVK
Sbjct: 183 YTSVKGAKVVIDRLTGRTKGYGFVK 205

[Close]

BLAST of Sgr019598 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 242.7 bits (618), Expect = 4.3e-64
Identity = 137/208 (65.87%), Postives = 157/208 (75.48%), Query Frame = 0


Query: 118 PAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPA 177
           P  G+ PH+ P  + Q QQ   Q PY +    PP     PQMW  Q  AA P VQPT   
Sbjct: 6   PPGGILPHHAPPPSAQ-QQYGYQQPYGIAGAAPPP----PQMWNPQ-AAAPPSVQPT--- 65

Query: 178 SGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 237
           + DE+RTLWIGDLQYWMDE++L+GCFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  AA
Sbjct: 66  TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 125

Query: 238 ERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETF 297
           ERVLQT+N  P+P+   Q FRLNWA  S+G+KR DD+PDYTIFVGDLA DVTDY+L ETF
Sbjct: 126 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETF 185

Query: 298 RARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RA Y SVKGAKVVIDR+TGRTKGYGFV+
Sbjct: 186 RASYPSVKGAKVVIDRVTGRTKGYGFVR 203

[Close]

BLAST of Sgr019598 vs. TAIR 10
Match: AT1G11650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 242.7 bits (618), Expect = 4.3e-64
Identity = 137/208 (65.87%), Postives = 157/208 (75.48%), Query Frame = 0


Query: 118 PAPGVAPHNVPHQAPQYQQPQPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPA 177
           P  G+ PH+ P  + Q QQ   Q PY +    PP     PQMW  Q  AA P VQPT   
Sbjct: 6   PPGGILPHHAPPPSAQ-QQYGYQQPYGIAGAAPPP----PQMWNPQ-AAAPPSVQPT--- 65

Query: 178 SGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 237
           + DE+RTLWIGDLQYWMDE++L+GCFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  AA
Sbjct: 66  TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 125

Query: 238 ERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETF 297
           ERVLQT+N  P+P+   Q FRLNWA  S+G+KR DD+PDYTIFVGDLA DVTDY+L ETF
Sbjct: 126 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETF 185

Query: 298 RARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           RA Y SVKGAKVVIDR+TGRTKGYGFV+
Sbjct: 186 RASYPSVKGAKVVIDRVTGRTKGYGFVR 203

[Close]

BLAST of Sgr019598 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.0 bits (541), Expect = 3.6e-55
Identity = 114/180 (63.33%), Postives = 129/180 (71.67%), Query Frame = 0


Query: 144 MMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPASGDEVRTLWIGDLQYWMDESYLFGCF 203
           MM PPQPPQ   G    PQ L               +EVRTLWIGDLQYW+DE+YL  CF
Sbjct: 3   MMHPPQPPQ---GSYHHPQTL---------------EEVRTLWIGDLQYWVDENYLTSCF 62

Query: 204 AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASA 263
           + TGE+ SVKVIRNK TGQ EGYGFIEF++  AAER LQTYNGT MP     FRLNWAS 
Sbjct: 63  SQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASF 122

Query: 264 GE-KRQDDTPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           G  ++ D  PD++IFVGDLA DVTDY+LQETFR  Y+SV+GAKVV D  TGR+KGYGFVK
Sbjct: 123 GSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVK 164

[Close]

BLAST of Sgr019598 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.0 bits (541), Expect = 3.6e-55
Identity = 114/180 (63.33%), Postives = 129/180 (71.67%), Query Frame = 0


Query: 144 MMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQPASGDEVRTLWIGDLQYWMDESYLFGCF 203
           MM PPQPPQ   G    PQ L               +EVRTLWIGDLQYW+DE+YL  CF
Sbjct: 3   MMHPPQPPQ---GSYHHPQTL---------------EEVRTLWIGDLQYWVDENYLTSCF 62

Query: 204 AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASA 263
           + TGE+ SVKVIRNK TGQ EGYGFIEF++  AAER LQTYNGT MP     FRLNWAS 
Sbjct: 63  SQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASF 122

Query: 264 GE-KRQDDTPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           G  ++ D  PD++IFVGDLA DVTDY+LQETFR  Y+SV+GAKVV D  TGR+KGYGFVK
Sbjct: 123 GSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVK 164

[Close]

BLAST of Sgr019598 vs. TAIR 10
Match: AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-53
Identity = 120/207 (57.97%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 128 PHQAPQYQQP--QPQPPYMMMPPQPPQVQPGPQMWPQQLQAASPQVQPTQ--------PA 187
           P Q P  QQ   Q Q  +MM   Q  Q QP P  W QQ   +S Q Q  Q        P 
Sbjct: 16  PGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQQQYGGGGSQNPG 75

Query: 188 SGDEVRTLWIGDLQYWMDESYLFGCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 247
           S  E+R+LWIGDLQ WMDE+YL   F  TGE ++ KVIRNKQ G SEGYGFIEF+    A
Sbjct: 76  SAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATA 135

Query: 248 ERVLQTYNGTPMPNGAQNFRLNWA--SAGEKRQDDTPDYTIFVGDLAGDVTDYVLQETFR 307
           ER LQTYNG PMP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA DVTD++L ETF+
Sbjct: 136 ERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFK 195

Query: 308 ARYTSVKGAKVVIDRLTGRTKGYGFVK 323
           A Y+SVKGAKVV DR TGR+KGYGFV+
Sbjct: 196 AVYSSVKGAKVVNDRTTGRSKGYGFVR 221

The following BLAST results are available for this feature:

BLAST of Sgr019598 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139915.1	3.5e-108	95.63	polyadenylate-binding protein RBP45-like isoform X2 [Momordica charantia]	[more]
XP_022139914.1	3.5e-108	95.63	polyadenylate-binding protein RBP45-like isoform X1 [Momordica charantia]	[more]
XP_022139916.1	3.5e-108	95.63	polyadenylate-binding protein RBP45-like isoform X3 [Momordica charantia]	[more]
XP_038894238.1	9.8e-103	91.75	polyadenylate-binding protein RBP45-like isoform X1 [Benincasa hispida]	[more]
XP_038894239.1	9.8e-103	91.75	polyadenylate-binding protein RBP45-like isoform X2 [Benincasa hispida]	[more]

BLAST of Sgr019598 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAB3	6.1e-63	65.87	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]
Q0J9Y2	1.8e-62	62.86	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9LEB4	1.8e-59	58.18	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q8VXZ9	5.1e-54	63.33	Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'...	[more]
Q93W34	3.7e-52	57.97	Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C P...	[more]

BLAST of Sgr019598 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CE43	1.7e-108	95.63	polyadenylate-binding protein RBP45-like isoform X3 OS=Momordica charantia OX=36...	[more]
A0A6J1CEA6	1.7e-108	95.63	polyadenylate-binding protein RBP45-like isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1CDL7	1.7e-108	95.63	polyadenylate-binding protein RBP45-like isoform X2 OS=Momordica charantia OX=36...	[more]
A0A0A0LX40	1.5e-104	84.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063550 PE=4 SV=1	[more]
A0A6J1CDX8	2.4e-102	91.71	polyadenylate-binding protein RBP45-like isoform X1 OS=Momordica charantia OX=36...	[more]

BLAST of Sgr019598 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11650.2	4.3e-64	65.87	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G11650.1	4.3e-64	65.87	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.1	3.6e-55	63.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	3.6e-55	63.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G27000.1	2.6e-53	57.97	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 275..332 e-value: 0.037 score: 19.4 coord: 184..259 e-value: 1.1E-13 score: 61.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 185..249 e-value: 2.8E-12 score: 46.3 coord: 276..323 e-value: 3.1E-7 score: 30.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 274..324 score: 11.230014
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 183..263 score: 15.51092
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 124..270 e-value: 3.5E-23 score: 84.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 273..328 e-value: 4.0E-11 score: 44.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..159
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 134..323
None	No IPR available	PANTHER	PTHR47640:SF48	POLYADENYLATE-BINDING PROTEIN RBP45B	coord: 134..323
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 184..262 e-value: 1.14564E-47 score: 153.572
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 181..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr019598.1	Sgr019598.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding