Sgr019270 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019270
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	membrane protein of ER body-like protein
Location	tig00153343: 280809 .. 282313 (-)
RNA-Seq Expression	Sgr019270
Synteny	Sgr019270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCCAAAACAAGTGAGAACATTGAGGGTGCTGTACTTATACCAGTGGAATCACAGACTAAAGATTATAACAAATTAACTTCTCTTCACGAAGAGAATAGTTGCTGCGGTGAAGCTTCTTCTGATGGAAGGTTAATGGAAGCCACTAAACATATCAGTAGTAGAGATGATAGAAGGCAAGAGGTTTTGAAAAGCATGGTGGCTTGTGGGTTAACTGAATCCACCACAAGTTTAAGTATTGTAACAGCTGCAGCCAGTGCCCAGTTGTCCAATGGTAAAACAAAACTCTCTTCCCTCTGTGTATGTGTGTGTTAATAATCAGATTGCAATCTGTCTGAACTTTACATTTTATACTATTTGCCATCTGCAGGTCTCTCTCTCTCTCTCTCTAAACTTCACATTCTACTCTTTTTAAACGTCACATTCTATACTATTTTGGCTCTTTGCAGGTCTCTCTCTCTAAACTTGACATTCTACTCTCTTTAAGCTCCACATTCTATACTATATTTGCTATTTGCAGGGTTCTCTCTCTAAATTTCCCATTCTACTCTCTTTAAAGTTCACATTCTATACTAATTTGCTATGTGCAAGTCTCTCTCTCTCTAAATTTACATTCTACTCTCTTTAAACTTCACATTCTATGCTATTTTTCTATTTTCAGCTCTCTCGCTCTTTCTCTCAACTTCACATTCTCTCTCTTTAAACTTCACATTCTATACTATTTTGCTATTTGCAGCTCTCTCTCTCTCTCTACTTCACATTCTACTCTCTTTAAATTTCACGTTGTATACTAATTTGCTATTTGTTGGTCTCTCTCTCTCTGAATTTCATATTCTACTCTCTTTGAACTTCACATTCAATGCTATTTTTCTATTTGCAACTCTCTCTCTCTCTCAACTTCATATTCTACTCTCTTTAAACTTCACATTCTATACTATTTTGCTATTTTCAGCTCTCTTTCTCTCAACTTCGCATTCTACTCTGTTTAGACTTCACATTCTATACTAATTTGCTATTTGCTGGTCTCTCTCTCTCTCTGAATTTCGTATTCTACTCTCTTTAAACTTCACATTCAATGCTATTTTTCTATTGGCAACTCTCTCTCTCTCTCAACTTCATATTCTACTCTCTTTAAACTTCACATTCTATACTATTTTGCTATTTTCAGCTCTCTTTCTCTCAACTTCGCATTCTACTCTGTTTAAACTTCACATTCTATACTAATTTGCTATTTTGAGGTCTCTCTCTCTCTAAATTTCACATTCTACTTTCTTTAAACTTCACATTCTATGCTATTTTTCTATTTGCAGCTCTCTCTCTCTAAACTTCACATTCTATTCTCTTTAAACTTCACATTCTATACTATTTTTGCTATTTGCAGCTCTCTCTCAACTTCACATTCTACTCTCTTTAAACTTCACATACACTATTTTGCTATTTGCAGGGAATATAGTGGCGTTGGCATTGACAAATCTAATTGCTGGACTTTTTGTCATTAGACATAAT

mRNA sequence

TGTCCAAAACAAGTGAGAACATTGAGGGTGCTGTACTTATACCAGTGGAATCACAGACTAAAGATTATAACAAATTAACTTCTCTTCACGAAGAGAATAGTTGCTGCGGTGAAGCTTCTTCTGATGGAAGGTTAATGGAAGCCACTAAACATATCAGTAGTAGAGATGATAGAAGGCAAGAGGTTTTGAAAAGCATGGTGGCTTGTGGGTTAACTGAATCCACCACAAGTTTAAGTATTGTAACAGCTGCAGCCAGTGCCCAGTTGTCCAATGGGAATATAGTGGCGTTGGCATTGACAAATCTAATTGCTGGACTTTTTGTCATTAGACATAAT

Coding sequence (CDS)

TGTCCAAAACAAGTGAGAACATTGAGGGTGCTGTACTTATACCAGTGGAATCACAGACTAAAGATTATAACAAATTAACTTCTCTTCACGAAGAGAATAGTTGCTGCGGTGAAGCTTCTTCTGATGGAAGGTTAATGGAAGCCACTAAACATATCAGTAGTAGAGATGATAGAAGGCAAGAGGTTTTGAAAAGCATGGTGGCTTGTGGGTTAACTGAATCCACCACAAGTTTAAGTATTGTAACAGCTGCAGCCAGTGCCCAGTTGTCCAATGGGAATATAGTGGCGTTGGCATTGACAAATCTAATTGCTGGACTTTTTGTCATTAGACATAAT

Protein sequence

SKTSENIEGAVLIPVESQTKDYNKLTSLHEENSCCGEASSDGRLMEATKHISSRDDRRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN

Homology

[Close]

BLAST of Sgr019270 vs. NCBI nr
Match: XP_022155092.1 (membrane protein of ER body-like protein [Momordica charantia])

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-22
Identity = 74/108 (68.52%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 20  KDYN--KLTSLHEEN-----SCCGEASS---------DGRLMEATKHISSRDDRRQEVLK 79
           K YN  ++ S +EE      SCC EASS         DGR MEAT+ I+SR  RRQEVLK
Sbjct: 52  KHYNVTEVESDYEEEDRKYISCCNEASSVEVVISNSDDGRFMEATEQINSRSYRRQEVLK 111

Query: 80  SMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           SMVACGLTESTTSLSIVTAAA+AQ+SN NIV LALTNLIAGLFVIRHN
Sbjct: 112 SMVACGLTESTTSLSIVTAAATAQISNENIVVLALTNLIAGLFVIRHN 159

[Close]

BLAST of Sgr019270 vs. NCBI nr
Match: XP_023548925.1 (uncharacterized protein LOC111807427 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 57  RRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           RR E+ + +V  GL ES TSL+IVTAA SA++S+GNI+ALALTNLIAGLF+IRH+
Sbjct: 577 RRWEIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 631

[Close]

BLAST of Sgr019270 vs. NCBI nr
Match: KAG6575995.1 (Membrane protein of ER body 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 57  RRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           RR E+ + +V  GL ES TSL+IVTAA SA++S+GNI+ALALTNLIAGLF+IRH+
Sbjct: 695 RRWEIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 749

[Close]

BLAST of Sgr019270 vs. NCBI nr
Match: XP_022954207.1 (uncharacterized protein LOC111456533 isoform X2 [Cucurbita moschata])

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 57  RRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           RR E+ + +V  GL ES TSL+IVTAA SA++S+GNI+ALALTNLIAGLF+IRH+
Sbjct: 723 RRWEIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 777

[Close]

BLAST of Sgr019270 vs. NCBI nr
Match: XP_023548918.1 (uncharacterized protein LOC111807425 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 57  RRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           RR E+ + +V  GL ES TSL+IVTAA SA++S+GNI+ALALTNLIAGLF+IRH+
Sbjct: 754 RRWEIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 808

[Close]

BLAST of Sgr019270 vs. ExPASy Swiss-Prot
Match: Q8LPT3 (Membrane protein of ER body-like protein OS=Arabidopsis thaliana OX=3702 GN=MEBL PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.6e-04
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 36  GEASSDGRLMEATKHISSRDDRRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVA 95
           G    +G L E          R+ E+LKS+V  GL E+ TSL ++++AA +  S  NI+ 
Sbjct: 520 GNLLEEGSLREPLMRRVVVQGRKLEILKSIVYGGLLEAITSLGVISSAAGSGASMLNILV 579

Query: 96  LALTNLIAGLFVIRHN 112
           L L NL+ GL +I HN
Sbjct: 580 LGLANLLGGLILIIHN 595

[Close]

BLAST of Sgr019270 vs. ExPASy TrEMBL
Match: A0A6J1DNF3 (membrane protein of ER body-like protein OS=Momordica charantia OX=3673 GN=LOC111022225 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-22
Identity = 74/108 (68.52%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 20  KDYN--KLTSLHEEN-----SCCGEASS---------DGRLMEATKHISSRDDRRQEVLK 79
           K YN  ++ S +EE      SCC EASS         DGR MEAT+ I+SR  RRQEVLK
Sbjct: 52  KHYNVTEVESDYEEEDRKYISCCNEASSVEVVISNSDDGRFMEATEQINSRSYRRQEVLK 111

Query: 80  SMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           SMVACGLTESTTSLSIVTAAA+AQ+SN NIV LALTNLIAGLFVIRHN
Sbjct: 112 SMVACGLTESTTSLSIVTAAATAQISNENIVVLALTNLIAGLFVIRHN 159

[Close]

BLAST of Sgr019270 vs. ExPASy TrEMBL
Match: A0A6J1JQG4 (membrane protein of ER body 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488012 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.3e-08
Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 52  SSRDDRRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 111
           S+R  RR E+ + +V  GL ES TSL+IVTAA +A++S+GNIVALALTNL+AGLFVIRH+
Sbjct: 17  STRVRRRWEIRRYIVLGGLMESITSLAIVTAAMTAKISDGNIVALALTNLLAGLFVIRHD 76

[Close]

BLAST of Sgr019270 vs. ExPASy TrEMBL
Match: A0A6J1GQF8 (uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.3e-08
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 57  RRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           RR E+ + +V  GL ES TSL+IVTAA SA++S+GNI+ALALTNLIAGLF+IRH+
Sbjct: 723 RRWEIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 777

[Close]

BLAST of Sgr019270 vs. ExPASy TrEMBL
Match: A0A6J1GQA4 (uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.3e-08
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 57  RRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           RR E+ + +V  GL ES TSL+IVTAA SA++S+GNI+ALALTNLIAGLF+IRH+
Sbjct: 724 RRWEIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 778

[Close]

BLAST of Sgr019270 vs. ExPASy TrEMBL
Match: A0A6J1GQF7 (uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.3e-08
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 57  RRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           RR E+ + +V  GL ES TSL+IVTAA SA++S+GNI+ALALTNLIAGLF+IRH+
Sbjct: 536 RRWEIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 590

[Close]

BLAST of Sgr019270 vs. TAIR 10
Match: AT4G27870.1 (Vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.6e-05
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 36  GEASSDGRLMEATKHISSRDDRRQEVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVA 95
           G    +G L E          R+ E+LKS+V  GL E+ TSL ++++AA +  S  NI+ 
Sbjct: 520 GNLLEEGSLREPLMRRVVVQGRKLEILKSIVYGGLLEAITSLGVISSAAGSGASMLNILV 579

Query: 96  LALTNLIAGLFVIRHN 112
           L L NL+ GL +I HN
Sbjct: 580 LGLANLLGGLILIIHN 595

[Close]

BLAST of Sgr019270 vs. TAIR 10
Match: AT5G24290.2 (Vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 9.8e-05
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 60  EVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           E+LKS V  GLTE+ TSL +V++A+++  S  NI+ALA+ NL  GL V+  N
Sbjct: 329 ELLKSTVYGGLTETITSLGVVSSASASGSSTMNILALAVANLAGGLIVLAQN 380

[Close]

BLAST of Sgr019270 vs. TAIR 10
Match: AT5G24290.1 (Vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 9.8e-05
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 60  EVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           E+LKS V  GLTE+ TSL +V++A+++  S  NI+ALA+ NL  GL V+  N
Sbjct: 345 ELLKSTVYGGLTETITSLGVVSSASASGSSTMNILALAVANLAGGLIVLAQN 396

[Close]

BLAST of Sgr019270 vs. TAIR 10
Match: AT4G27860.1 (vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 60  EVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           E+LKS+V  GLTES TSL  VT+AA++  S  N++AL + NL +GL +  H+
Sbjct: 412 EILKSIVYGGLTESITSLCTVTSAAASGASTLNVLALGVANLSSGLLLTVHS 463

[Close]

BLAST of Sgr019270 vs. TAIR 10
Match: AT4G27860.2 (vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 60  EVLKSMVACGLTESTTSLSIVTAAASAQLSNGNIVALALTNLIAGLFVIRHN 112
           E+LKS+V  GLTES TSL  VT+AA++  S  N++AL + NL +GL +  H+
Sbjct: 397 EILKSIVYGGLTESITSLCTVTSAAASGASTLNVLALGVANLSSGLLLTVHS 448

The following BLAST results are available for this feature:

BLAST of Sgr019270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155092.1	2.2e-22	68.52	membrane protein of ER body-like protein [Momordica charantia]	[more]
XP_023548925.1	1.5e-07	67.27	uncharacterized protein LOC111807427 [Cucurbita pepo subsp. pepo]	[more]
KAG6575995.1	1.5e-07	67.27	Membrane protein of ER body 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954207.1	1.5e-07	67.27	uncharacterized protein LOC111456533 isoform X2 [Cucurbita moschata]	[more]
XP_023548918.1	1.5e-07	67.27	uncharacterized protein LOC111807425 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sgr019270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPT3	3.6e-04	39.47	Membrane protein of ER body-like protein OS=Arabidopsis thaliana OX=3702 GN=MEBL...	[more]

BLAST of Sgr019270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNF3	1.1e-22	68.52	membrane protein of ER body-like protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1JQG4	7.3e-08	65.00	membrane protein of ER body 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488012 P...	[more]
A0A6J1GQF8	7.3e-08	67.27	uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GQA4	7.3e-08	67.27	uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GQF7	7.3e-08	67.27	uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Sgr019270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27870.1	2.6e-05	39.47	Vacuolar iron transporter (VIT) family protein	[more]
AT5G24290.2	9.8e-05	50.00	Vacuolar iron transporter (VIT) family protein	[more]
AT5G24290.1	9.8e-05	50.00	Vacuolar iron transporter (VIT) family protein	[more]
AT4G27860.1	1.3e-04	50.00	vacuolar iron transporter (VIT) family protein	[more]
AT4G27860.2	1.3e-04	50.00	vacuolar iron transporter (VIT) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31851:SF64	GLYCINE-RICH PROTEIN FAMILY	coord: 39..111
IPR008217	Ccc1 family	PANTHER	PTHR31851	FE(2+)/MN(2+) TRANSPORTER PCL1	coord: 39..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr019270.1	Sgr019270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030026	cellular manganese ion homeostasis
biological_process	GO:0071421	manganese ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005384	manganese ion transmembrane transporter activity