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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATGGCGAACTCGTCGTCGAGGATTCCGCCGGCGGCGCTGCCGTTGGCGTTGTTGGAGCTGCCATTGACGTTGACGGAGGAGGATTTGACGAGGGTTGGGCTGACGGAGCAGCGGAGGGAGAGGTCGAAATCGGAGAGCATTATGTGGCCTTCGTCTCTGATCAACAAGTTCTCGGGCTTCAAATCTCTGTAGACTATACCTAA mRNA sequence ATGGATGGCGAACTCGTCGTCGAGGATTCCGCCGGCGGCGCTGCCGTTGGCGTTGTTGGAGCTGCCATTGACGTTGACGGAGGAGGATTTGACGAGGGTTGGGCTGACGGAGCAGCGGAGGGAGAGGTCGAAATCGGAGAGCATTATGTGGCCTTCGTCTCTGATCAACAAGTTCTCGGGCTTCAAATCTCTGTAGACTATACCTAA Coding sequence (CDS) ATGGATGGCGAACTCGTCGTCGAGGATTCCGCCGGCGGCGCTGCCGTTGGCGTTGTTGGAGCTGCCATTGACGTTGACGGAGGAGGATTTGACGAGGGTTGGGCTGACGGAGCAGCGGAGGGAGAGGTCGAAATCGGAGAGCATTATGTGGCCTTCGTCTCTGATCAACAAGTTCTCGGGCTTCAAATCTCTGTAGACTATACCTAA Protein sequence MDGELVVEDSAGGAAVGVVGAAIDVDGGGFDEGWADGAAEGEVEIGEHYVAFVSDQQVLGLQISVDYT
Homology
BLAST of Sgr019013 vs. NCBI nr
Match: KAB8098644.1 (hypothetical protein EE612_028063, partial [Oryza sativa] >BAS92948.1 Os05g0237501, partial [Oryza sativa Japonica Group]) HSP 1 Score: 55.1 bits (131), Expect = 2.8e-04 Identity = 35/61 (57.38%), Postives = 38/61 (62.30%), Query Frame = 0 Query: 5 LVVEDSAGGAAVGVVGAAIDVDGGGFDEGWADGAAEGEVEIGEHYVAFVSDQQVLGLQIS 64 L D AA AA VDGGG DEG ADGAAEGEVE+GEH VA V Q VL L++ Sbjct: 200 LAAVDGVSSAAY-AAAAAGGVDGGGLDEGGADGAAEGEVEVGEHDVAVVPHQDVLRLEVP 259
Query: 65 V 66 V Sbjct: 260 V 259
BLAST of Sgr019013 vs. ExPASy TrEMBL
Match: A0A0P0WJP2 (Os05g0237501 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0237501 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04 Identity = 35/61 (57.38%), Postives = 38/61 (62.30%), Query Frame = 0 Query: 5 LVVEDSAGGAAVGVVGAAIDVDGGGFDEGWADGAAEGEVEIGEHYVAFVSDQQVLGLQIS 64 L D AA AA VDGGG DEG ADGAAEGEVE+GEH VA V Q VL L++ Sbjct: 200 LAAVDGVSSAAY-AAAAAGGVDGGGLDEGGADGAAEGEVEVGEHDVAVVPHQDVLRLEVP 259
Query: 65 V 66 V Sbjct: 260 V 259
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAB8098644.1 | 2.8e-04 | 57.38 | hypothetical protein EE612_028063, partial [Oryza sativa] >BAS92948.1 Os05g02375... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0P0WJP2 | 1.4e-04 | 57.38 | Os05g0237501 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os05... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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