Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAATGGTGTCCACTCCGTCCGTCGTGTGCTGATCCTCCTGATGGTGAAGCGTCTCCACCGTCGCATACCCTTTGGCATTTGCATACTTCCCCGTCCCTCCGATCACCGCAATCTGAGACTCCGGCGTCGCCGTCCGGTGTACTCCAAAGAAGCTTATCGTGTCCTGAGCCTCGTGTTCATGGCTGCCGCTGTGAAACAACGCCGTCAAAGCCACGGTCTGGCTGGTCCCGTCCAACGAGCTAGCCAAGTAGAACCCCTGTGCCCGCCCGATCACCGCCGACCCGAGCTCGAGGCCTTCGGTTAACTCGTCGTCGATCACCGTCACGGACCCGAACATCAACTGCTGAAGCGTGACTCTCGAGGGGAGCTGTCCCGCGGTGACGAACGGCTGGTTGTCTCCGCCGTTAAGGACGCCGTTGTTGGCGCTGTTTTGGAGGAGTAAGTTGCCGCCTTGGGTGGCGCCGTTGAAGCCGGCGAGGAAAGGGAGGTTGTTGTTGTTGTTAATGATGTTTTTAAAATTGTCGTTGTTGAGTAATGGGAGGCTTCCTTGGATTGGGAAGAAGTTGTCGTTTGGCTTTGAAAAGGCGATGCCGTTGTTGTCGGAGTTGGCCACGATTCCGGTGACCACTCTGGCGGATGGATGAGATCCTCCGAGAATGTCGTGCATGAAGAACGAAAATGGTTGGGGTCCTTGCTGTGTCGCCGTCGCACCCACCGCCGTCGTCGGAAGCGGAACCGACCCAGTTGGCGTTGCCGCTGTTGGTACACCGGCCACCGGTGCCACGGCAACCGGAGCTGTTGCAGTGGCATCATCTTCCTCATCTTCCGCCCCTGAATTACCTGCGACAGGTGCGTTGGTTCCTGGTGTTGCTGAGTCATCGGCCTCATCATCGGAGGTGGCCGGAGAAGGAGTGGTTGTCGGAATCTGGCCGCCACTCGACGGTGCTGTACCTGGGCCGGCCTGTTGA
mRNA sequence
ATGGACAATGGTGTCCACTCCGTCCGTCGTGTGCTGATCCTCCTGATGGTGAAGCGTCTCCACCGTCGCATACCCTTTGGCATTTGCATACTTCCCCGTCCCTCCGATCACCGCAATCTGAGACTCCGGCGTCGCCGTCCGGTGTACTCCAAAGAAGCTTATCGTGTCCTGAGCCTCGTGTTCATGGCTGCCGCTGTGAAACAACGCCGTCAAAGCCACGGTCTGGCTGGTCCCGTCCAACGAGCTAGCCAAGGGAGCTGTCCCGCGGTGACGAACGGCTGGTTGTCTCCGCCGTTAAGGACGCCGTTGTTGGCGCTGTTTTGGAGGAGTAAGTTGCCGCCTTGGGTGGCGCCGTTGAAGCCGGCGAGGAAAGGGAGGTTGTTGTTGTTGTTAATGATGTTTTTAAAATTGTCGTTGTTGAGTAATGGGAGGCTTCCTTGGATTGGGAAGAAGTTGTCGTTTGGCTTTGAAAAGGCGATGCCGTTGTTGTCGGAGTTGGCCACGATTCCGAACGAAAATGGTTGGGGTCCTTGCTGTGTCGCCGTCGCACCCACCGCCGTCGTCGGAAGCGGAACCGACCCAGTTGGCGTTGCCGCTGTTGGTACACCGGCCACCGGTGCCACGGCAACCGGAGCTGTTGCAGTGGCATCATCTTCCTCATCTTCCGCCCCTGAATTACCTGCGACAGGTGCGTTGGTTCCTGGTGTTGCTGAGTCATCGGCCTCATCATCGGAGGTGGCCGGAGAAGGAGTGGTTGTCGGAATCTGGCCGCCACTCGACGGTGCTGTACCTGGGCCGGCCTGTTGA
Coding sequence (CDS)
ATGGACAATGGTGTCCACTCCGTCCGTCGTGTGCTGATCCTCCTGATGGTGAAGCGTCTCCACCGTCGCATACCCTTTGGCATTTGCATACTTCCCCGTCCCTCCGATCACCGCAATCTGAGACTCCGGCGTCGCCGTCCGGTGTACTCCAAAGAAGCTTATCGTGTCCTGAGCCTCGTGTTCATGGCTGCCGCTGTGAAACAACGCCGTCAAAGCCACGGTCTGGCTGGTCCCGTCCAACGAGCTAGCCAAGGGAGCTGTCCCGCGGTGACGAACGGCTGGTTGTCTCCGCCGTTAAGGACGCCGTTGTTGGCGCTGTTTTGGAGGAGTAAGTTGCCGCCTTGGGTGGCGCCGTTGAAGCCGGCGAGGAAAGGGAGGTTGTTGTTGTTGTTAATGATGTTTTTAAAATTGTCGTTGTTGAGTAATGGGAGGCTTCCTTGGATTGGGAAGAAGTTGTCGTTTGGCTTTGAAAAGGCGATGCCGTTGTTGTCGGAGTTGGCCACGATTCCGAACGAAAATGGTTGGGGTCCTTGCTGTGTCGCCGTCGCACCCACCGCCGTCGTCGGAAGCGGAACCGACCCAGTTGGCGTTGCCGCTGTTGGTACACCGGCCACCGGTGCCACGGCAACCGGAGCTGTTGCAGTGGCATCATCTTCCTCATCTTCCGCCCCTGAATTACCTGCGACAGGTGCGTTGGTTCCTGGTGTTGCTGAGTCATCGGCCTCATCATCGGAGGTGGCCGGAGAAGGAGTGGTTGTCGGAATCTGGCCGCCACTCGACGGTGCTGTACCTGGGCCGGCCTGTTGA
Protein sequence
MDNGVHSVRRVLILLMVKRLHRRIPFGICILPRPSDHRNLRLRRRRPVYSKEAYRVLSLVFMAAAVKQRRQSHGLAGPVQRASQGSCPAVTNGWLSPPLRTPLLALFWRSKLPPWVAPLKPARKGRLLLLLMMFLKLSLLSNGRLPWIGKKLSFGFEKAMPLLSELATIPNENGWGPCCVAVAPTAVVGSGTDPVGVAAVGTPATGATATGAVAVASSSSSSAPELPATGALVPGVAESSASSSEVAGEGVVVGIWPPLDGAVPGPAC
Homology
BLAST of Sgr018695 vs. NCBI nr
Match:
GAY45340.1 (hypothetical protein CUMW_088740 [Citrus unshiu])
HSP 1 Score: 84.7 bits (208), Expect = 1.3e-12
Identity = 80/192 (41.67%), Postives = 97/192 (50.52%), Query Frame = 0
Query: 85 GSCPAVTNGWLSPPLRTPLLALFWRSKLPPWVAPLKPARKGRLLLLLMMFLKLSLLSNGR 144
GSCPA T GWLS PL L+ + + L APL+P RKG L MM L+L + +G
Sbjct: 32 GSCPAETKGWLSSPLTMLLVPVSCNTVL--GCAPLRPVRKG-TLSGFMMSLRLFWVKSGV 91
Query: 145 LPWIGKKLSFGFEKAMPLLSELATIP---NENGWGP-------------CCVAVAPTAVV 204
PW GKKLS EK MPL+S A IP +GW P C +A A+
Sbjct: 92 PPWTGKKLSLDLEKGMPLISVSAMIPVTTLADGWDPPSISCIKKHNGGVCGPGLATVALA 151
Query: 205 GSGTD--PVGVAAVGTPATGAT-ATGAVAVASSSSSSAPELPATGALVPGVAESSASSSE 258
+ D P+G VGT GAT +TGA A+SSS S + GA PG +E SSS
Sbjct: 152 ATAGDAGPLGDEVVGTAGNGATSSTGA---AASSSLSIGGITLVGASAPGASE---SSSG 211
BLAST of Sgr018695 vs. NCBI nr
Match:
KAG6404666.1 (hypothetical protein SASPL_136919 [Salvia splendens])
HSP 1 Score: 76.3 bits (186), Expect = 4.6e-10
Identity = 98/263 (37.26%), Postives = 131/263 (49.81%), Query Frame = 0
Query: 1 MDNGVHSVRRVLILLMVKRLHRRIPFGICILPRPSDHRNLRLRRRRPVYSKEAYRVLSLV 60
M +G +S+ VLI L + + R F I ILP P+++R++R RRRRP +K+ +
Sbjct: 110 MSDGFNSISSVLIHL-GQSFNGRKSFSILILPSPTNNRDVRDRRRRPCTAKKLTVSKTSP 169
Query: 61 FMAAAVKQRRQSHGLAGPVQRASQGSCPAVTNGWLSPPLRTPLLALFWRSKLPPWVAPLK 120
AV S L ++ SCP VT GWL P T LL LFW + L APL+
Sbjct: 170 PWNTAVS---ASVWLLPSLELVR--SCPDVTKGWLPRP-ETTLLPLFWTTVLDG--APLR 229
Query: 121 PARKGRLLLLLMMFLKLSLLSNGRLPWIGKKLSFGFEKAMPLLSELATIPN---ENGWGP 180
P RKGRLLL LS G P +GK F FE L+SELATIP +G+ P
Sbjct: 230 PTRKGRLLLFTTPLTVLS----GTPPLMGKNWLF-FENGRLLVSELATIPATALPDGFEP 289
Query: 181 ----CCVAVAPTAVVGSGTDP-VGVAAVGTPATGATATGAVAVASSSSSSAPELPATGAL 240
C ++ G+ T G ++ G AT AV S +S +P TGA+
Sbjct: 290 PRMSCMEKGKCRSIAGNFTGAGTGNSSGGGGGVAATLVAGEAVVSGGASESP-TSGTGAM 349
Query: 241 V-PGVAESSASSSEVAGEGVVVG 255
G +E+ A++S VAGE VV G
Sbjct: 350 TGAGSSETGATTSLVAGEVVVSG 357
BLAST of Sgr018695 vs. NCBI nr
Match:
KDO67796.1 (hypothetical protein CISIN_1g029401mg [Citrus sinensis])
HSP 1 Score: 63.5 bits (153), Expect = 3.1e-06
Identity = 61/149 (40.94%), Postives = 72/149 (48.32%), Query Frame = 0
Query: 117 APLKPARKGRLLLLLMMFLKLSLLSNGRLPWIGKKLSFGFEKAMPLLSELATIP---NEN 176
APL+P RKG L MM L+L + +G PW GKKLS EK MPL+S A IP +
Sbjct: 15 APLRPVRKG-TLSGFMMSLRLFWVKSGVPPWTGKKLSLDLEKGMPLISVSAMIPVTTLAD 74
Query: 177 GWGP---CCVAVAPTAVVGSGTDPVGVAAVGTPA--TGATATGAVAVASSSSSSAPELPA 236
GW P C+ V G G V +AA A G G A+SSS S +
Sbjct: 75 GWDPPSISCIKKHNGGVCGPGLATVALAATAGDAGPLGDEVVGTAGAAASSSLSIGGITL 134
Query: 237 TGALVPGVAESSASSSEVAGEGVVVGIWP 258
GA PG +E SSS VA V G WP
Sbjct: 135 VGASAPGASE---SSSGVASGAAVAGNWP 159
BLAST of Sgr018695 vs. NCBI nr
Match:
KAG9138830.1 (hypothetical protein Leryth_007470 [Lithospermum erythrorhizon])
HSP 1 Score: 59.3 bits (142), Expect = 5.8e-05
Identity = 65/159 (40.88%), Postives = 76/159 (47.80%), Query Frame = 0
Query: 85 GSCPAVTNGWLSPPLRTPLLALFWRSKLPPWVAPLKPARKGRLLLLLMMFLKLSLLSNGR 144
G PAVT GWL P L T LL LFWR PL+PAR G+LLLL+M ++LS G
Sbjct: 32 GRFPAVTKGWLPPLLATSLLPLFWRLV----CCPLRPARMGKLLLLIMPLIELS----GT 91
Query: 145 LPWIGKKLSFGFEKAMPLLSELA---TIPNENGWGPCC-VAVAPTAVVGSGTDPVGVAAV 204
P+IG F FE S LA P E G AVA VV +G +G AA
Sbjct: 92 PPFIGNTWLFAFENGSCYHSILAAGVAAPAEATTGASTGGAVATMGVVAAGISSLGNAAE 151
Query: 205 GTPATGATATGAVAVASSSSSSAPELPATGALVPGVAES 240
G G + T V SS AP A G + GV+ S
Sbjct: 152 GGTTGGTSGTSLPIV----SSGAP--GAVGRVYCGVSSS 176
BLAST of Sgr018695 vs. NCBI nr
Match:
KAF5453508.1 (hypothetical protein F2P56_028405, partial [Juglans regia])
HSP 1 Score: 58.2 bits (139), Expect = 1.3e-04
Identity = 83/214 (38.79%), Postives = 96/214 (44.86%), Query Frame = 0
Query: 85 GSCPAVTNGWLSPPL-RTPLLALFWRSKLPPWVAPLKPARKGRLLLLLMMFLKLSLLSNG 144
GSCPAVTNG L L LL LFW + PL+PA GRLLLL + L+ +LLS G
Sbjct: 10 GSCPAVTNGRLPLLLSMMSLLPLFWMTVEAWGPTPLRPAMMGRLLLLTIP-LRSALLS-G 69
Query: 145 RLPWIGKKLSFGFEKAMPLLSELATIP-------------------NENGWGPCCVAVAP 204
P GK LS G K PL A IP N GP A
Sbjct: 70 TPPVSGKMLSLGCVKGRPLNWVFAMIPVTTLADGCVPPRMSCMKKVNAGVCGPTGFATVA 129
Query: 205 TAVVGSGTDPVGVAAVGTPATGA-TATGAVAVASSSSSSAPEL---PATGALVPGVAESS 264
VV +G D V V + P TGA ATGA V+ SSSS E A G + G++
Sbjct: 130 LVVVVTG-DSVPVGVIVGPTTGAMPATGAATVSGSSSSGCGESASDSAAGLAIGGMSTMG 189
Query: 265 ASSSE----VAGEGVVVGIWPPLDGAVPG--PAC 269
S S V+ V GIWP G+V G P C
Sbjct: 190 ISDSGNGGLVSSAAGVAGIWP--FGSVVGVRPTC 218
BLAST of Sgr018695 vs. ExPASy TrEMBL
Match:
A0A2H5NZ00 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_088740 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 6.3e-13
Identity = 80/192 (41.67%), Postives = 97/192 (50.52%), Query Frame = 0
Query: 85 GSCPAVTNGWLSPPLRTPLLALFWRSKLPPWVAPLKPARKGRLLLLLMMFLKLSLLSNGR 144
GSCPA T GWLS PL L+ + + L APL+P RKG L MM L+L + +G
Sbjct: 32 GSCPAETKGWLSSPLTMLLVPVSCNTVL--GCAPLRPVRKG-TLSGFMMSLRLFWVKSGV 91
Query: 145 LPWIGKKLSFGFEKAMPLLSELATIP---NENGWGP-------------CCVAVAPTAVV 204
PW GKKLS EK MPL+S A IP +GW P C +A A+
Sbjct: 92 PPWTGKKLSLDLEKGMPLISVSAMIPVTTLADGWDPPSISCIKKHNGGVCGPGLATVALA 151
Query: 205 GSGTD--PVGVAAVGTPATGAT-ATGAVAVASSSSSSAPELPATGALVPGVAESSASSSE 258
+ D P+G VGT GAT +TGA A+SSS S + GA PG +E SSS
Sbjct: 152 ATAGDAGPLGDEVVGTAGNGATSSTGA---AASSSLSIGGITLVGASAPGASE---SSSG 211
BLAST of Sgr018695 vs. ExPASy TrEMBL
Match:
A0A4D8Z5Z3 (NB-ARC domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_032903 PE=4 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 98/263 (37.26%), Postives = 131/263 (49.81%), Query Frame = 0
Query: 1 MDNGVHSVRRVLILLMVKRLHRRIPFGICILPRPSDHRNLRLRRRRPVYSKEAYRVLSLV 60
M +G +S+ VLI L + + R F I ILP P+++R++R RRRRP +K+ +
Sbjct: 702 MSDGFNSISSVLIHL-GQSFNGRKSFSILILPSPTNNRDVRDRRRRPCTAKKLTVSKTSP 761
Query: 61 FMAAAVKQRRQSHGLAGPVQRASQGSCPAVTNGWLSPPLRTPLLALFWRSKLPPWVAPLK 120
AV S L ++ SCP VT GWL P T LL LFW + L APL+
Sbjct: 762 PWNTAVS---ASVWLLPSLELVR--SCPDVTKGWLPRP-ETTLLPLFWTTVLDG--APLR 821
Query: 121 PARKGRLLLLLMMFLKLSLLSNGRLPWIGKKLSFGFEKAMPLLSELATIPN---ENGWGP 180
P RKGRLLL LS G P +GK F FE L+SELATIP +G+ P
Sbjct: 822 PTRKGRLLLFTTPLTVLS----GTPPLMGKNWLF-FENGRLLVSELATIPATALPDGFEP 881
Query: 181 ----CCVAVAPTAVVGSGTDP-VGVAAVGTPATGATATGAVAVASSSSSSAPELPATGAL 240
C ++ G+ T G ++ G AT AV S +S +P TGA+
Sbjct: 882 PRMSCMEKGKCRSIAGNFTGAGTGNSSGGGGGVAATLVAGEAVVSGGASESP-TSGTGAM 941
Query: 241 V-PGVAESSASSSEVAGEGVVVG 255
G +E+ A++S VAGE VV G
Sbjct: 942 TGAGSSETGATTSLVAGEVVVSG 949
BLAST of Sgr018695 vs. ExPASy TrEMBL
Match:
A0A067FX75 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029401mg PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 1.5e-06
Identity = 61/149 (40.94%), Postives = 72/149 (48.32%), Query Frame = 0
Query: 117 APLKPARKGRLLLLLMMFLKLSLLSNGRLPWIGKKLSFGFEKAMPLLSELATIP---NEN 176
APL+P RKG L MM L+L + +G PW GKKLS EK MPL+S A IP +
Sbjct: 15 APLRPVRKG-TLSGFMMSLRLFWVKSGVPPWTGKKLSLDLEKGMPLISVSAMIPVTTLAD 74
Query: 177 GWGP---CCVAVAPTAVVGSGTDPVGVAAVGTPA--TGATATGAVAVASSSSSSAPELPA 236
GW P C+ V G G V +AA A G G A+SSS S +
Sbjct: 75 GWDPPSISCIKKHNGGVCGPGLATVALAATAGDAGPLGDEVVGTAGAAASSSLSIGGITL 134
Query: 237 TGALVPGVAESSASSSEVAGEGVVVGIWP 258
GA PG +E SSS VA V G WP
Sbjct: 135 VGASAPGASE---SSSGVASGAAVAGNWP 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
GAY45340.1 | 1.3e-12 | 41.67 | hypothetical protein CUMW_088740 [Citrus unshiu] | [more] |
KAG6404666.1 | 4.6e-10 | 37.26 | hypothetical protein SASPL_136919 [Salvia splendens] | [more] |
KDO67796.1 | 3.1e-06 | 40.94 | hypothetical protein CISIN_1g029401mg [Citrus sinensis] | [more] |
KAG9138830.1 | 5.8e-05 | 40.88 | hypothetical protein Leryth_007470 [Lithospermum erythrorhizon] | [more] |
KAF5453508.1 | 1.3e-04 | 38.79 | hypothetical protein F2P56_028405, partial [Juglans regia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2H5NZ00 | 6.3e-13 | 41.67 | Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_088740 PE=4 SV=1 | [more] |
A0A4D8Z5Z3 | 2.2e-10 | 37.26 | NB-ARC domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_032903 P... | [more] |
A0A067FX75 | 1.5e-06 | 40.94 | Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029401mg PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |