Sgr018683 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018683
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	serine/arginine-rich SC35-like splicing factor SCL30
Location	tig00153207: 454521 .. 458488 (+)
RNA-Seq Expression	Sgr018683
Synteny	Sgr018683

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGATACAGTCCACCATATCACAGTCCTCCAAGAAGAGGATATGGTGGTCGAGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGGTATGGAAGACGAAGGGATCAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGTCAGGATTTTGCCACTTTTTTTTAAGTACTATATAGTTTTGTCTAATATATGCTGTGGTACTGCTGTATTAATTATGAATTTGTTGTTTTCTCTCATTGCCTTTAAGAACATGGCTTCTGGTTATATTGATACTTGCAGGCCAGAGGAGCTTAGAGCGCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATCCCGAAGGATTTTTACACAGGGTGAGCATCCTGCGTTTGTTTATTTATTTAATTGTCACACGATTCCAACCATGGTATGTGATTGGATTCATTAAGCTGTTATTCAATGTTATGATTCCTGAACTTAAACTTTTACATTCCTTGCAAGTTAACATGATAATGACACAATTCTTATGGTTAAAATTTGGGCTTCTGGGCACCAATTTGCACAAAGATATAATCAAATTAACCTCAAACAGGGTTAATGCGGTAAGTTTTAGGTTTACCGATTAAGCATCTAGCCATGTCTTTTGCATTAGAAACTGAGCCTGATTTCTCACGATTGTTTGTTGCTCAGCCATGTGTCAAACTCAGCTTCTTATATTGACCAATCATCGATAAAAGTCAAAATGTATAGAGCACATTTAAAGCTTTTCTCATCGGCATGTCAAGATCCTATTTCAGAACAATGTCTAACTTTCTCTTTATTCTTCTGGAAATACCGTCTTATGTGCCTACACATGCAAGATGAAATAAACTCATATGCAATTGTCAAGGAGACTTTTTCACAGCTATGTTTGAACTTGATCTATTCTTGAGGGTGTGCATGTGTCCTGAGCTCTAAATTTGTATGAAATTTTAGATCATTTGGAACATTCGGTTGAGTTTGTTATTCATGGTTAGGGAATGAAGAGGATGAAAAATGTCAAATGAAGTTTCACCAGACCTTTTTTTCTGGGTGATTTTTATTCCCGTTTCATAGTGTGTAAATTTTGAACTGCTTTGTCAGGGGGCATATTGGTTTGAACTTTGAAGTTAAAACAAGCCCAAGCCCCATATTAATGAGGGTCTACTACTTTTCACTGCCTAACGTATTGCTCATCAAGAATGTAAAGAGTAATATCCAAATGACAAATGTGGGTGTCTCTCTCTGAGGAGATATTAGATAATTACCCCATCAATGGAAGTTGATGAGGAAGAAGCTAGATTCTTGAGCAATTGAAGCCAACAAGGGGAAGGTTTTAAGGTTGTGGAATGTTTGTTCAAGTGCTTCATGTGTTTCCAAGTATTTGAAGAATTTTCAAGTCATGAATTGTTGATTTCAAGTACTTTTATCAAGATATGTGAAGCTTTTTCAAGTCAAGTTACGTTGAATCGAAGTGCTTATAGTTACAAGAATATGAAGATTTTTCAAGTCACTTGCCTCTTTCATGCTTGATTGTAAAGAGAAGGTTAGCTACTAAACTTTGAAATTAGCTGCTTTATGTAACTTCAGCCTCAGCTTTGATGAAAGCAATCTGAAGTTGATATTGGATGTGAAAGAAAGCTATTTAGTTTATGGCATCTCAAATCCTTTTGGCCACAAAAAGTATACTAGTTTAATCAGTCAATGAAGTTACTCAAGATTTTTGTCCAGAATGAGTTTCTTATTCTCGTTATGAAAGTTTTGTTTAAATTCTTTGTAGTGAACCTCGAGGGTTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTATCATATGAATGGGAAAAAATTTGCTGGGAGGGAGATCACTGTGGTCCTTGCGGCAGAGACAAGGAAGAGGCCAGAACAGATGCGTCAAAGGAGTAGAAGGTAGTTTATATATTCTCTTTTACCTCTCTTTCTTAATGGTTTCAAGAGACTAATTTTACAATCCAAACTCCATTTCTGTAGTTTTACAATTCAGACGCCCTTGCATTTACTTTCATGCTTGTTTGCTTGAAGCATATTTATTCTCGTTTGTTGGGAAAAATTTCCCCCTTTTTCTGCATTGTATGCTACGTAACTAACCTGCCATGCAGTTAAACTGAAAGCAACCATCTTATCAAAGGGGAAAAAACAAAGCAATTTAAAACTTCCGCTCTTGCCATTCGCTGTGGCCAAAGGCTAATATAATAGCCTTTTAGGACATTTATTTAGTTGCAAGTCGCTTTTATTTACGATTCTATTTTCCCTTTCTGCAGGGGACCATTTGGCTATGGTGGACGACGTTCCTATTATGGTATGGGTAGAAGTGATCGCTCTTCAAAATTTTGCACATCTTCTTTTAAATATCATTATAGTTGTTAAGTGAAAACCCCAATTTAAGAAAAAAAAAATCAGTGAGAAGGCCTTGTATTCAAATTCTGATTTTTCTATTCCTCGACTGTTCAAGAAGACTATAACTTTACTTCTTGTTATGAAACTGTTGGACACTACAGCATGTAATTGCACGTGTATTTTTCTTTGACTTTTCTTGAGTCTTGGGATTGGTGTATTTATGTACCAACACAATTGACGTTATTTATAAGCTCTAAGTGATTATATAACATCTAGACACAATCTATTTTTTTGTATAGAACTGAGGAGTTCCTCACATGGATATGAATTTAGGCAGTCGTTTGACCCTTTTCCTTAAAAGATTCTTTTTCTAGCGTGATGCTTTTGTTTGGAGATCTTGATTCTAAACCTTTTGTTTCCATATGGGCATCCATTTGCAGCTGCTTTGAAATATAAGCATATAATAATTCTTTTGTTTCTGGTAGCTTAATGGCAGCTCGTTGGTCATGAATTTGTGAATTTGCAGTCTTGCAGGTTTTGGTAATTGATTGAATTAAAAATAAAATCCTCTGTACATTGAATTTGTTCATGGATATTATAGGTTTTCTATTTGTTGCGAAATTTCAGGCACACAAACCGTAGCTTGGAGTTAAACTATCGACTCTTGAACTAGCCAAAATAAGTCCATATTAGATTATTGTATTTAATGATCAAACATGGTTTTAGGCAGCAACTGATCGATTGAATTTTTTCTGATAATATAGGGCGTTCTAGATCTCGTTCAGTATCCCGGTCACGCTCCCCCCATCATCCTTCAGGTTCAAGAAGTAGATATCGCTCCAGGTAATCCATTTAAAACAAGATGTTCATATTTAATTATGCTATAGGTAGTAAATCTGCAAATGTAATTTGCAGGTCCTACTCTCCTGCTCCGAGGTGGCGAGGTGACTATTCTGTTTCCCCTAGTAGAAGGCATGCAGACTACCCCAGATCCCCAAGAGGGGCTCTGCGTGAGCGAGATGGTGAGAGGAGTCAGCAAGCCTATTCTCCAGCTTATGATAATGCTGATGGTCATGATCAAAATGGAAATGGAAATGGATATCACGGGTAAGTTGAATGATTTACTGATGACTTGGACGTGTTTGACTGTATGGGTAACCCCCCCCCCCCAAAAATTTCGGCCAGTTTGCAATTGTGACATTATTGAATTTGGGGAGCTTCTCTAATATGTGACTATTATTAGTGTTGTTTCTGCATGCGTTGTTTATTATTACGAACGTTGGTCTCATGGTTGAGAATGTTTTCTTTCAGTTCGTTTAATCTTATTGTCTTCGTTTACTACTGCTGGTTAAAAAAAGTTTGTGTTGTGTTGTGTTTTATTTATTTGTCAATTCCTTTTCTTCTTTTTTAGCAAGTCGGCATTTGAAGGAGACGATGCACGAGCTAATTGGAGGTCTTCTCCCGGTAGAAGGTCTTCTCCTGGTAGAACATCAAGATCCCCATCCGGGTCTCGATCCCGCTCTGCTGATGCGTCACCGAGGCATGGTAGATGA

mRNA sequence

ATGAGGAGATACAGTCCACCATATCACAGTCCTCCAAGAAGAGGATATGGTGGTCGAGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGGTATGGAAGACGAAGGGATCAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGCGCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATCCCGAAGGATTTTTACACAGGTGAACCTCGAGGGTTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTATCATATGAATGGGAAAAAATTTGCTGGGAGGGAGATCACTGTGGTCCTTGCGGCAGAGACAAGGAAGAGGCCAGAACAGATGCGTCAAAGGAGTAGAAGGGGACCATTTGGCTATGGTGGACGACGTTCCTATTATGGGCGTTCTAGATCTCGTTCAGTATCCCGGTCACGCTCCCCCCATCATCCTTCAGGTTCAAGAAGTAGATATCGCTCCAGGTCCTACTCTCCTGCTCCGAGGTGGCGAGGTGACTATTCTGTTTCCCCTAGTAGAAGGCATGCAGACTACCCCAGATCCCCAAGAGGGGCTCTGCGTGAGCGAGATGGTGAGAGGAGTCAGCAAGCCTATTCTCCAGCTTATGATAATGCTGATGGTCATGATCAAAATGGAAATGGAAATGGATATCACGGCAAGTCGGCATTTGAAGGAGACGATGCACGAGCTAATTGGAGGTCTTCTCCCGGTAGAAGGTCTTCTCCTGGTAGAACATCAAGATCCCCATCCGGGTCTCGATCCCGCTCTGCTGATGCGTCACCGAGGCATGGTAGATGA

Coding sequence (CDS)

ATGAGGAGATACAGTCCACCATATCACAGTCCTCCAAGAAGAGGATATGGTGGTCGAGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGGTATGGAAGACGAAGGGATCAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGCGCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATCCCGAAGGATTTTTACACAGGTGAACCTCGAGGGTTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTATCATATGAATGGGAAAAAATTTGCTGGGAGGGAGATCACTGTGGTCCTTGCGGCAGAGACAAGGAAGAGGCCAGAACAGATGCGTCAAAGGAGTAGAAGGGGACCATTTGGCTATGGTGGACGACGTTCCTATTATGGGCGTTCTAGATCTCGTTCAGTATCCCGGTCACGCTCCCCCCATCATCCTTCAGGTTCAAGAAGTAGATATCGCTCCAGGTCCTACTCTCCTGCTCCGAGGTGGCGAGGTGACTATTCTGTTTCCCCTAGTAGAAGGCATGCAGACTACCCCAGATCCCCAAGAGGGGCTCTGCGTGAGCGAGATGGTGAGAGGAGTCAGCAAGCCTATTCTCCAGCTTATGATAATGCTGATGGTCATGATCAAAATGGAAATGGAAATGGATATCACGGCAAGTCGGCATTTGAAGGAGACGATGCACGAGCTAATTGGAGGTCTTCTCCCGGTAGAAGGTCTTCTCCTGGTAGAACATCAAGATCCCCATCCGGGTCTCGATCCCGCTCTGCTGATGCGTCACCGAGGCATGGTAGATGA

Protein sequence

MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR

Homology

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BLAST of Sgr018683 vs. NCBI nr
Match: XP_022139086.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia])

HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141
Identity = 267/288 (92.71%), Postives = 272/288 (94.44%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRRDQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY    GGGGGYGRRR+Q HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKD+Y+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAE+RKRPEQMRQRSRRGP GYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGY 240
           SPAPRWRGDYSVSPSRRHADYPRSPRGA  ERDGERSQQAYSP YDNADGHD   +GNGY
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDH--DGNGY 240

Query: 241 HGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           H KSAFEG D RANWRSSPGRRSSPGR SRSPSGSRSRSADASPRHGR
Sbjct: 241 HDKSAFEGGDVRANWRSSPGRRSSPGRISRSPSGSRSRSADASPRHGR 286

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BLAST of Sgr018683 vs. NCBI nr
Match: KAG7031619.1 (Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498.0 bits (1281), Expect = 5.2e-137
Identity = 257/284 (90.49%), Postives = 265/284 (93.31%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRPEELR 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRR+QPHGSLLVRNIPMDCRPEELR
Sbjct: 27  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR 86

Query: 61  APFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAA 120
           APFERFGLVRDVYIPKD+YTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI VVLAA
Sbjct: 87  APFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAA 146

Query: 121 ETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAP 180
           E+RKRPEQMRQRSRRGP  YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSYSPAP
Sbjct: 147 ESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAP 206

Query: 181 RWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHGKS 240
           RWRGDYSVSPSRRHADYPRSPRGA RERDGERS+Q YSP YDNADG D +GNGNGYH K 
Sbjct: 207 RWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKP 266

Query: 241 AFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           AFEG+DARANW      R SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 267 AFEGEDARANW------RPSPDRTSRSPSGSRSRSADASPRHGR 304

[Close]

BLAST of Sgr018683 vs. NCBI nr
Match: XP_022957588.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita moschata] >XP_022957589.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita moschata])

HSP 1 Score: 491.9 bits (1265), Expect = 3.7e-135
Identity = 256/286 (89.51%), Postives = 265/286 (92.66%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGYGRRRDQPHGSLLVRNIPMDCRPEE 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGYGRRR+QPHGSLLVRNIPMDCRPEE
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEE 60

Query: 61  LRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVL 120
           LRAPFERFGLVRDVYIPKD+YTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI VVL
Sbjct: 61  LRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVL 120

Query: 121 AAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSP 180
           AAE+RKRPEQMRQRSRRGP  YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSYSP
Sbjct: 121 AAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSP 180

Query: 181 APRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHG 240
           APRWRGDYSVSPSRRHADYPRSPRGA RERDGER++Q YSP YDNADG D +GNGNGYH 
Sbjct: 181 APRWRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHD 240

Query: 241 KSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           K AFEG+DARANW      R SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 241 KPAFEGEDARANW------RPSPDRTSRSPSGSRSRSADASPRHGR 280

[Close]

BLAST of Sgr018683 vs. NCBI nr
Match: XP_022987464.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima] >XP_022987470.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima])

HSP 1 Score: 491.1 bits (1263), Expect = 6.4e-135
Identity = 257/291 (88.32%), Postives = 265/291 (91.07%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY-------GGGGGYGRRRDQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY       GGGGGYGRRR+QPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKD+YTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRS 180
           I VVLAAE+RKRPEQMRQRSRRGP  YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RS
Sbjct: 121 IAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRS 180

Query: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNG 240
           RSYSPAPRWRGDYSVSPSRRHADYPRSPRGA RERDGERS+Q YSP YDNADG D +GNG
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNG 240

Query: 241 NGYHGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           NGYH K AFEG+DARANW      R SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 241 NGYHDKPAFEGEDARANW------RPSPDRTSRSPSGSRSRSADASPRHGR 285

[Close]

BLAST of Sgr018683 vs. NCBI nr
Match: XP_008461655.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461656.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461657.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo])

HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-134
Identity = 258/288 (89.58%), Postives = 264/288 (91.67%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRRDQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY    GGGGGYGRRR+QPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKD+YTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAE+RKRPEQMRQRSRRGP GYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGY 240
           SPAPRWRGDYSVSP RRHADYP SPRGA RERD ERS+Q YSP YDNAD HDQ  NGNGY
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQ--NGNGY 240

Query: 241 HGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           H KS FEG+DAR NW      RSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 HDKSGFEGEDARGNW------RSSPGRTSRSPSGSRSRSADASPRHGR 280

[Close]

BLAST of Sgr018683 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-73
Identity = 174/290 (60.00%), Postives = 200/290 (68.97%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRP 60
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGG G RR   HGSLLVRNIP+DCRP
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELR PFERFG VRDVYIP+D+Y+G+PRGFAFVEFVD Y+A EAQ  MN + FAGREITV
Sbjct: 61  EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITV 120

Query: 121 VLAAETRKRPEQMRQRSR-RGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRS 180
           V+A+E+RKRPE+MR ++R R     G R   +GRSRSRS+SRSRSP  PS SRSRYRSRS
Sbjct: 121 VVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRSRS 180

Query: 181 YSPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDN----ADGHDQNG 240
           YSPAPR RG                PRG   E D   S+++YSP Y+     A   D+NG
Sbjct: 181 YSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDRDRNG 240

Query: 241 NGNGYHGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPR 282
           + N    K  +E +D R   R+           SRSPSGSRSRS + SPR
Sbjct: 241 D-NEIREKPGYEAEDRRRGGRA----------VSRSPSGSRSRSVEVSPR 262

[Close]

BLAST of Sgr018683 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-35
Identity = 130/283 (45.94%), Postives = 157/283 (55.48%), Query Frame = 0


Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRPEELRA 61
           R Y+P   SPP RGYG RGRSP  RG  G    GR RD P  SLLVRN+  DCR E+LR 
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG----GRSRDLP-TSLLVRNLRHDCRQEDLRK 63

Query: 62  PFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAE 121
            FE+FG V+D+Y+P+D+YTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV A E
Sbjct: 64  SFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEE 123

Query: 122 TRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPR 181
            RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS        
Sbjct: 124 NRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS-------- 183

Query: 182 WRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHGKSA 241
             GDY   P RRH  +PRS        DG RS  + SPA D + G           GKS 
Sbjct: 184 --GDYYSPPPRRH--HPRSISPREERYDGRRS-YSRSPASDGSRGRSL----TPVRGKSR 243

Query: 242 FEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
                 R +   SP R  SP    R+ S S  RS   SPR  R
Sbjct: 244 SLSPSPRRSISRSPRRSRSPS-PKRNRSVSPRRSISRSPRRSR 253

[Close]

BLAST of Sgr018683 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 116/283 (40.99%), Postives = 150/283 (53.00%), Query Frame = 0


Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRPEELRA 61
           R Y+P   SPP RGYG RGRSP  RG  GG    R  D P  SLLVRN+  DCR E+LR 
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGG---SRDSDLP-TSLLVRNLRHDCRQEDLRR 63

Query: 62  PFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAE 121
           PFE+FG V+D+Y+P+D+YTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV A E
Sbjct: 64  PFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEE 123

Query: 122 TRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPR 181
            RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+    
Sbjct: 124 NRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNS--- 183

Query: 182 WRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHGKSA 241
                   P++RH     SP+   R  + ERS     P                ++G   
Sbjct: 184 -------PPAKRHQSRSVSPQD--RRYEKERSYSRSPP----------------HNGSRV 243

Query: 242 FEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
             G   R    S   RRS   R +RS +  ++RS    PR  R
Sbjct: 244 RSGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSR 244

[Close]

BLAST of Sgr018683 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-23
Identity = 80/190 (42.11%), Postives = 103/190 (54.21%), Query Frame = 0


Query: 19  RGRSPP--GRGYGGGGGYGRRRDQPHGS-----LLVRNIPMDCRPEELRAPFERFGLVRD 78
           R RSPP   +GY       R   + H S     LL+RN+P+D RP +LR  FERFG ++D
Sbjct: 16  RDRSPPRERKGYDDNRLRERPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFERFGPLKD 75

Query: 79  VYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAETRKRPEQMRQ 138
           +Y+P+++YTGEPRGF FV++    +A+EA   MN K   GREI +V A E RK P++MR 
Sbjct: 76  IYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRT 135

Query: 139 RSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPS 198
            +     G  GR   Y R+  RS  R    H    SRSR   R  S   + R D   SP 
Sbjct: 136 TN-----GTSGRHGDYKRTSHRSPRRRYRSH----SRSRSPPRRESRHSKVREDDLYSPR 195

Query: 199 RRHADYPRSP 202
           RR     RSP
Sbjct: 196 RRSRSISRSP 196

[Close]

BLAST of Sgr018683 vs. ExPASy Swiss-Prot
Match: Q9BRL6 (Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.5e-19
Identity = 96/246 (39.02%), Postives = 128/246 (52.03%), Query Frame = 0


Query: 44  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYH 103
           +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  
Sbjct: 15  TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74

Query: 104 MNGKKFAGREITVVLAAETRK-----RPEQMRQRSRRGPFGYGGR-RSYYGRSRS---RS 163
           M+G +  GRE+ V +A   R+     R  + R RSR G  GYG R RSY  RSRS   R 
Sbjct: 75  MDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGG--GYGRRSRSYGRRSRSPRRRH 134

Query: 164 VSRSRSPH-HPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERS 223
            SRSR P    S SRSRYR   YS +P  R  YS       + Y RSP    R R+    
Sbjct: 135 RSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYS------RSRYSRSPYSRSRYRESR-- 194

Query: 224 QQAYSPAYDNADGHDQNGNGNGYHGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRS 280
              Y  ++ ++ G+  N   + YH   +     +  + RS+   +SS  R S+S S SRS
Sbjct: 195 ---YGGSHYSSSGY-SNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRS 246

[Close]

BLAST of Sgr018683 vs. ExPASy TrEMBL
Match: A0A6J1CBL6 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3673 GN=LOC111010084 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.6e-142
Identity = 267/288 (92.71%), Postives = 272/288 (94.44%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRRDQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY    GGGGGYGRRR+Q HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKD+Y+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAE+RKRPEQMRQRSRRGP GYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGY 240
           SPAPRWRGDYSVSPSRRHADYPRSPRGA  ERDGERSQQAYSP YDNADGHD   +GNGY
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDH--DGNGY 240

Query: 241 HGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           H KSAFEG D RANWRSSPGRRSSPGR SRSPSGSRSRSADASPRHGR
Sbjct: 241 HDKSAFEGGDVRANWRSSPGRRSSPGRISRSPSGSRSRSADASPRHGR 286

[Close]

BLAST of Sgr018683 vs. ExPASy TrEMBL
Match: A0A6J1H0N2 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=3662 GN=LOC111458935 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135
Identity = 256/286 (89.51%), Postives = 265/286 (92.66%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGYGRRRDQPHGSLLVRNIPMDCRPEE 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGYGRRR+QPHGSLLVRNIPMDCRPEE
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEE 60

Query: 61  LRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVL 120
           LRAPFERFGLVRDVYIPKD+YTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI VVL
Sbjct: 61  LRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVL 120

Query: 121 AAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSP 180
           AAE+RKRPEQMRQRSRRGP  YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSYSP
Sbjct: 121 AAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSP 180

Query: 181 APRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHG 240
           APRWRGDYSVSPSRRHADYPRSPRGA RERDGER++Q YSP YDNADG D +GNGNGYH 
Sbjct: 181 APRWRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHD 240

Query: 241 KSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           K AFEG+DARANW      R SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 241 KPAFEGEDARANW------RPSPDRTSRSPSGSRSRSADASPRHGR 280

[Close]

BLAST of Sgr018683 vs. ExPASy TrEMBL
Match: A0A6J1JIZ1 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661 GN=LOC111485002 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.1e-135
Identity = 257/291 (88.32%), Postives = 265/291 (91.07%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY-------GGGGGYGRRRDQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY       GGGGGYGRRR+QPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKD+YTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRS 180
           I VVLAAE+RKRPEQMRQRSRRGP  YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RS
Sbjct: 121 IAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRS 180

Query: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNG 240
           RSYSPAPRWRGDYSVSPSRRHADYPRSPRGA RERDGERS+Q YSP YDNADG D +GNG
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNG 240

Query: 241 NGYHGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           NGYH K AFEG+DARANW      R SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 241 NGYHDKPAFEGEDARANW------RPSPDRTSRSPSGSRSRSADASPRHGR 285

[Close]

BLAST of Sgr018683 vs. ExPASy TrEMBL
Match: A0A1S3CFP8 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=LOC103500205 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.3e-135
Identity = 258/288 (89.58%), Postives = 264/288 (91.67%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRRDQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY    GGGGGYGRRR+QPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKD+YTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAE+RKRPEQMRQRSRRGP GYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGY 240
           SPAPRWRGDYSVSP RRHADYP SPRGA RERD ERS+Q YSP YDNAD HDQ  NGNGY
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQ--NGNGY 240

Query: 241 HGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
           H KS FEG+DAR NW      RSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 HDKSGFEGEDARGNW------RSSPGRTSRSPSGSRSRSADASPRHGR 280

[Close]

BLAST of Sgr018683 vs. ExPASy TrEMBL
Match: A0A6J1FWZ5 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=3662 GN=LOC111447732 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 253/285 (88.77%), Postives = 263/285 (92.28%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY-GGGGGYGRRRDQPHGSLLVRNIPMDCRPEEL 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY GGGGGYGR+R+Q HGSLLVRNIPMDCRPEEL
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGYGRQREQSHGSLLVRNIPMDCRPEEL 60

Query: 61  RAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLA 120
           RAPFERFGLVRDVYIPKD+YTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLA
Sbjct: 61  RAPFERFGLVRDVYIPKDYYTGDPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLA 120

Query: 121 AETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPA 180
           AE+RKRPEQMRQRSRRGP GYGGRRSYYGRSRSRSVSRSRSPH PSGS SRYRSRSYSPA
Sbjct: 121 AESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHRPSGS-SRYRSRSYSPA 180

Query: 181 PRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHGK 240
           PRWRG+YS+SP RRHADYPRSPRGA RERDGERS Q YSP YDNA GHD   +GNGYH K
Sbjct: 181 PRWRGNYSLSPDRRHADYPRSPRGAPRERDGERSHQVYSPGYDNAGGHDH--DGNGYHDK 240

Query: 241 SAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
            AFEG+DARA+W      RSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 PAFEGEDARADW------RSSPGRTSRSPSGSRSRSADASPRHGR 276

[Close]

BLAST of Sgr018683 vs. TAIR 10
Match: AT3G55460.1 (SC35-like splicing factor 30 )

HSP 1 Score: 278.1 bits (710), Expect = 7.9e-75
Identity = 174/290 (60.00%), Postives = 200/290 (68.97%), Query Frame = 0


Query: 1   MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRP 60
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGG G RR   HGSLLVRNIP+DCRP
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELR PFERFG VRDVYIP+D+Y+G+PRGFAFVEFVD Y+A EAQ  MN + FAGREITV
Sbjct: 61  EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITV 120

Query: 121 VLAAETRKRPEQMRQRSR-RGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRS 180
           V+A+E+RKRPE+MR ++R R     G R   +GRSRSRS+SRSRSP  PS SRSRYRSRS
Sbjct: 121 VVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRSRS 180

Query: 181 YSPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDN----ADGHDQNG 240
           YSPAPR RG                PRG   E D   S+++YSP Y+     A   D+NG
Sbjct: 181 YSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDRDRNG 240

Query: 241 NGNGYHGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPR 282
           + N    K  +E +D R   R+           SRSPSGSRSRS + SPR
Sbjct: 241 D-NEIREKPGYEAEDRRRGGRA----------VSRSPSGSRSRSVEVSPR 262

[Close]

BLAST of Sgr018683 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 )

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37
Identity = 112/225 (49.78%), Postives = 137/225 (60.89%), Query Frame = 0


Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRPEELRA 61
           R Y+P   SPP RGYG RGRSP  RG  G    GR RD P  SLLVRN+  DCR E+LR 
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG----GRSRDLP-TSLLVRNLRHDCRQEDLRK 63

Query: 62  PFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAE 121
            FE+FG V+D+Y+P+D+YTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV A E
Sbjct: 64  SFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEE 123

Query: 122 TRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPR 181
            RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS        
Sbjct: 124 NRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS-------- 183

Query: 182 WRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADG 227
             GDY   P RRH  +PRS        DG RS  + SPA D + G
Sbjct: 184 --GDYYSPPPRRH--HPRSISPREERYDGRRS-YSRSPASDGSRG 200

[Close]

BLAST of Sgr018683 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 )

HSP 1 Score: 151.8 bits (382), Expect = 8.5e-37
Identity = 130/283 (45.94%), Postives = 157/283 (55.48%), Query Frame = 0


Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRPEELRA 61
           R Y+P   SPP RGYG RGRSP  RG  G    GR RD P  SLLVRN+  DCR E+LR 
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG----GRSRDLP-TSLLVRNLRHDCRQEDLRK 63

Query: 62  PFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAE 121
            FE+FG V+D+Y+P+D+YTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV A E
Sbjct: 64  SFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEE 123

Query: 122 TRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPR 181
            RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS        
Sbjct: 124 NRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS-------- 183

Query: 182 WRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHGKSA 241
             GDY   P RRH  +PRS        DG RS  + SPA D + G           GKS 
Sbjct: 184 --GDYYSPPPRRH--HPRSISPREERYDGRRS-YSRSPASDGSRGRSL----TPVRGKSR 243

Query: 242 FEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
                 R +   SP R  SP    R+ S S  RS   SPR  R
Sbjct: 244 SLSPSPRRSISRSPRRSRSPS-PKRNRSVSPRRSISRSPRRSR 253

[Close]

BLAST of Sgr018683 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 )

HSP 1 Score: 145.2 bits (365), Expect = 8.0e-35
Identity = 130/295 (44.07%), Postives = 158/295 (53.56%), Query Frame = 0


Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRPEELRA 61
           R Y+P   SPP RGYG RGRSP  RG  G    GR RD P  SLLVRN+  DCR E+LR 
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG----GRSRDLP-TSLLVRNLRHDCRQEDLRK 63

Query: 62  PFERFGLVRDVYIPKDFYTG------------EPRGFAFVEFVDPYEASEAQYHMNGKKF 121
            FE+FG V+D+Y+P+D+YTG            +PRGF FV+F+DP +A++A++HM+G   
Sbjct: 64  SFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGYLL 123

Query: 122 AGREITVVLAAETRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRS 181
            GRE+TVV A E RK+P +MR R R G   +  RR    R+  R  SRSRSP  P   RS
Sbjct: 124 LGRELTVVFAEENRKKPTEMRARERGGGSRFRDRR----RTPPRYYSRSRSP-PPRRGRS 183

Query: 182 RYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQ 241
           R RS          GDY   P RRH  +PRS        DG RS  + SPA D + G   
Sbjct: 184 RSRS----------GDYYSPPPRRH--HPRSISPREERYDGRRS-YSRSPASDGSRGRSL 243

Query: 242 NGNGNGYHGKSAFEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
                   GKS       R +   SP R  SP    R+ S S  RS   SPR  R
Sbjct: 244 ----TPVRGKSRSLSPSPRRSISRSPRRSRSPS-PKRNRSVSPRRSISRSPRRSR 266

[Close]

BLAST of Sgr018683 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 141.7 bits (356), Expect = 8.8e-34
Identity = 116/283 (40.99%), Postives = 150/283 (53.00%), Query Frame = 0


Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRRDQPHGSLLVRNIPMDCRPEELRA 61
           R Y+P   SPP RGYG RGRSP  RG  GG    R  D P  SLLVRN+  DCR E+LR 
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGG---SRDSDLP-TSLLVRNLRHDCRQEDLRR 63

Query: 62  PFERFGLVRDVYIPKDFYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAE 121
           PFE+FG V+D+Y+P+D+YTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV A E
Sbjct: 64  PFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEE 123

Query: 122 TRKRPEQMRQRSRRGPFGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPR 181
            RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+    
Sbjct: 124 NRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNS--- 183

Query: 182 WRGDYSVSPSRRHADYPRSPRGALRERDGERSQQAYSPAYDNADGHDQNGNGNGYHGKSA 241
                   P++RH     SP+   R  + ERS     P                ++G   
Sbjct: 184 -------PPAKRHQSRSVSPQD--RRYEKERSYSRSPP----------------HNGSRV 243

Query: 242 FEGDDARANWRSSPGRRSSPGRTSRSPSGSRSRSADASPRHGR 285
             G   R    S   RRS   R +RS +  ++RS    PR  R
Sbjct: 244 RSGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSR 244

The following BLAST results are available for this feature:

BLAST of Sgr018683 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139086.1	1.6e-141	92.71	serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia]	[more]
KAG7031619.1	5.2e-137	90.49	Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyros...	[more]
XP_022957588.1	3.7e-135	89.51	serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita moschata] >XP_02...	[more]
XP_022987464.1	6.4e-135	88.32	serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima] >XP_0229...	[more]
XP_008461655.1	1.1e-134	89.58	PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >...	[more]

BLAST of Sgr018683 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3X8	1.1e-73	60.00	Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=...	[more]
Q9SEU4	1.2e-35	45.94	Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=...	[more]
Q9LHP2	1.2e-32	40.99	Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX...	[more]
Q1PDV2	1.4e-23	42.11	Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=...	[more]
Q9BRL6	3.5e-19	39.02	Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=...	[more]

BLAST of Sgr018683 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBL6	7.6e-142	92.71	serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3...	[more]
A0A6J1H0N2	1.8e-135	89.51	serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=36...	[more]
A0A6J1JIZ1	3.1e-135	88.32	serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661...	[more]
A0A1S3CFP8	5.3e-135	89.58	serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1FWZ5	1.2e-131	88.77	serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=36...	[more]

BLAST of Sgr018683 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55460.1	7.9e-75	60.00	SC35-like splicing factor 30	[more]
AT1G55310.2	2.2e-37	49.78	SC35-like splicing factor 33	[more]
AT1G55310.1	8.5e-37	45.94	SC35-like splicing factor 33	[more]
AT1G55310.3	8.0e-35	44.07	SC35-like splicing factor 33	[more]
AT3G13570.1	8.8e-34	40.99	SC35-like splicing factor 30A	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 44..117 e-value: 1.9E-21 score: 87.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 45..115 e-value: 2.0E-19 score: 69.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 43..121 score: 17.932785
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 35..159 e-value: 3.9E-26 score: 93.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..236
None	No IPR available	PANTHER	PTHR23147:SF96	OS02G0252100 PROTEIN	coord: 20..280
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 20..280
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 39..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr018683.1	Sgr018683.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding