Sgr018468 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018468
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	RNA-binding protein 24-A
Location	tig00153204: 240724 .. 244068 (+)
RNA-Seq Expression	Sgr018468
Synteny	Sgr018468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTACCAGCATATTCCGGGTCCGAGTTCGATATCTGGATCAAGTACGAGTTCTGGGTTCCTAAACTCTCCTTTTGGTGATACCACCTACACCAAGGTCTTCGTTGGTGGATTAGCCTGGGAAACTCAGAGCGAAACTATGAGACGTTACTTCGAGCAATTTGGAGAGATTCTTGAGGCTGTTGTCATAACAGATAAGAATACAGGGAGATCCAAAGGATATGGTTTCGTGAGTATTTAAAGTTTTCACTTTTTGGGCTTTTACTAGCTATATCTTTTTTCTACAGTAACAATCCAAGAACATTCGTTTTGACACTTTTTTAGAGCACGGGAGTCACGAGTTGCACCTAATTTCCTGATCATTAATATGAATATTGTAGTAGTTTATGGTGTGTCTATCATGTTACCCTCGTAGAAGGCGTGGTTTTGACATTTGAATGACCTGAACGTTTGTTCCTGTTTACATGGAGGGTTTTAGGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGCTGATCCAACTCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGCCGGCCGCGGCCACCTGTATCTTATGGTAGTATTAGCTTTTATTTGGTTTTCTTAACTTTGAGATCGTTTAGGAAATTGCATTGTTAGTTCTTGTCATGTGTGTTCGTATGATCAGGGACTTTTCCTGTTATGTTTATTTTGTATAAATATTACACTGAATAATGGTCGCAAATTTCTGTCTCAAGTCTTTGAAAGCTTTGAACTGATCTGCACTGTTGTTTCTTACAGGACGTTTAAGACCGCCTGCACTGTATGTTGGAGGCATGCAGCCCAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCGGTTTCTTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGGTGTGTCCCCGAGGTTCCTCTTTGTGCATCCAAGCCTGCCTATTGATTCAAATTTCATACTTTTGTTTAATTCACTTTTCTTGCCTTTTGTTATCAACCCTTACGTCTTGTAATATGACTCTGTGGCGTTTGCTTTCAAAATCTTGAAATTATGAGATCTTAGTTATGTTTTTCTTCTGTTTGTCGTCAGTTCTTATAGTAAATGAAAAATGCTGTCAAGTAATCATCGAAATGCAAATATATGCTTTTAGGTTTGGTATTTCATTTCAAGTACACGTTGTTTGTTCTTTAAATGGACATTAAATCCTATTTTTCTTCACTTCTAAAGATGGTTGGTGAACATCACTTGGTACATATCCTCTGCAAATTTAATGTTGATATTTACCTTTCAAGTCATAAGAGGTATATTACCAATCACAACATGCAACATTCCTTAGGATATGTTTCTTTGTCACCTCCTAGAAATCAGGATTGATTATATCCTGATCAGTGATGTGGCATAGTCTGATTGGTAATTGCAGGAATATCCTAGGTGGTATTTGCAGATGATAGGTGCCAAGATCATTGTAATTGAACGGGAAGAACCATGGCCAATATTAATGGACAAGTTCCATCTCATGTTTTTCCCTCGTAGTTTATATGAGAAGTCCATTTGATAGGATTTGACCATTTTAGACTAGTTAATTGGGATACCAAGTACTTGATCTCTTTGTATCACAATCTTCGTATCACAATGGACTTTGGATTGTAAAATGATTTCCTCCACTTAAATTTGCATATTTGTTTCAATTTGTACCACCATCTAGATTTTAGCTTTCACGATCTTATTCTCAGAAATATTTATAATATTTTCAATCATTCCTTTTTAATGCAGGTATGCTACATATGGACCTGAGTATGTCTACCCGCAGGTATCACTGCACCAATTGCTTTATTTACTAATGTGTGCAAGTTTGTGTGGGGAGAGTGGAAGTAGTAGGGAAGGGGGATATGAAGGGTATTTTTAGAAGGTTCTAAAGGAGTTTGGTAGTGCTAGCATATAATGCTCCTTTGTTCTGATTTCTGTGTTGCATCCTTTGGATAGGGTGGATACAACCCTTTTCTGGGTCAGCAATACCTGCAGATATATGGAGTGCCTGGGTCAGCGAGCCCTGCTATTTATCATTATGGACAATTAGGTCAAACTGTCCCTGGTGGTCATGGATATGGAACAGTACATGGATATGCAATGCCAAGTCCTCAGATTGTGCAGTTTAGTGGTCCTAATGTCAATGCATTAACATCTTCTCCAATGCCTACAATTCAGGCACCATATCCTTCAGGTATTTTGCCTTATATGAGGATCACTCTTGTTGTCATAATATGAAGATCACTCTTTATTGCAACATTGGGCTCAAATGTGTCTAGTCTCATAAAAATATATATATGTGTGTGTGTGTGTGTGTTTAGTCTAGTCTTTTTAGGTATTTTCCTTCTAATTTGTATTTTTATTTACCCACAATTGGTGCTCTTTTGTGTAGTTTTTTTTAGCCCCTCCTTTGGTTTGGCTTCATGGTCCTTTTCTTGTAGCCACTTTTGTTTCTTTCTTTCATTTACTTATTAAAAGTGCTTTTTTTTTTAATCTAAAAGAAGTGTGTTTAGTCAACTTGTGTTCAATCATTGCATTGACTTAGATATGTGATGAATAAAATGGATTATACTCTATGAAGAGTCAAAGTTGCTTCTGTGCATTGAAATGTCATCATCTTTTAAAGACAGTGGACCCAAAATTTGATATCTCATGAGGATATTAAAGATTCTTTTAATATGTTTCTTTGCTATGAAAACTTCTTTTATTTAAGAGGAATGAAACTGCAACTAAAGAGGGAGGCCATTCATGGGGATATTGAAATTCAGAACTGAATGGCAAGTGATCCATGGGGACTGATGATGAGAAAAAGTTTGGTTTACTACAAAATAAAGAAGATATAATATATTGAGAAATCTTTGTTGCTTAGTACAATTCAGGTCACGTTTTCTGTTTGTTCTACATGTACCCTGTTTTTGATCATCCGATGAAGAATGAGGGAAAGCTAAAACAATATACTTTAAGATGTTAGATATGTTTGATTAGGAAAATGTGTTTGTTTCATCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGAGGAGTTGATCAGGGTAAGCAAAGAACATTTTGCAGTTAATATTTGAAGTTGCTGTTCCTATCTTTATCACCAGCAGTCTCTAACCACCTGCAATTTTACTATATTTATAGGTATCCATAGATTGCAGCAGGACTTAGAGCAGCGGAACTGCTACTTGAGTGGCGGGCTTCGGATCTAG

mRNA sequence

ATGGCTTACCAGCATATTCCGGGTCCGAGTTCGATATCTGGATCAAGTACGAGTTCTGGGTTCCTAAACTCTCCTTTTGGTGATACCACCTACACCAAGGTCTTCGTTGGTGGATTAGCCTGGGAAACTCAGAGCGAAACTATGAGACGTTACTTCGAGCAATTTGGAGAGATTCTTGAGGCTGTTGTCATAACAGATAAGAATACAGGGAGATCCAAAGGATATGGTTTCGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGCTGATCCAACTCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGCCGGCCGCGGCCACCTGTATCTTATGGACGTTTAAGACCGCCTGCACTGTATGTTGGAGGCATGCAGCCCAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCGGTTTCTTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGGTATGCTACATATGGACCTGAGTATGTCTACCCGCAGGGTGGATACAACCCTTTTCTGGGTCAGCAATACCTGCAGATATATGGAGTGCCTGGGTCAGCGAGCCCTGCTATTTATCATTATGGACAATTAGGTCAAACTGTCCCTGGTGGTCATGGATATGGAACAGTACATGGATATGCAATGCCAAGTCCTCAGATTGTGCAGTTTAGTGGTCCTAATGTCAATGCATTAACATCTTCTCCAATGCCTACAATTCAGGCACCATATCCTTCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTATCCATAGATTGCAGCAGGACTTAGAGCAGCGGAACTGCTACTTGAGTGGCGGGCTTCGGATCTAG

Coding sequence (CDS)

ATGGCTTACCAGCATATTCCGGGTCCGAGTTCGATATCTGGATCAAGTACGAGTTCTGGGTTCCTAAACTCTCCTTTTGGTGATACCACCTACACCAAGGTCTTCGTTGGTGGATTAGCCTGGGAAACTCAGAGCGAAACTATGAGACGTTACTTCGAGCAATTTGGAGAGATTCTTGAGGCTGTTGTCATAACAGATAAGAATACAGGGAGATCCAAAGGATATGGTTTCGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGCTGATCCAACTCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGCCGGCCGCGGCCACCTGTATCTTATGGACGTTTAAGACCGCCTGCACTGTATGTTGGAGGCATGCAGCCCAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCGGTTTCTTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGGTATGCTACATATGGACCTGAGTATGTCTACCCGCAGGGTGGATACAACCCTTTTCTGGGTCAGCAATACCTGCAGATATATGGAGTGCCTGGGTCAGCGAGCCCTGCTATTTATCATTATGGACAATTAGGTCAAACTGTCCCTGGTGGTCATGGATATGGAACAGTACATGGATATGCAATGCCAAGTCCTCAGATTGTGCAGTTTAGTGGTCCTAATGTCAATGCATTAACATCTTCTCCAATGCCTACAATTCAGGCACCATATCCTTCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTATCCATAGATTGCAGCAGGACTTAGAGCAGCGGAACTGCTACTTGAGTGGCGGGCTTCGGATCTAG

Protein sequence

MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSYGRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGIHRLQQDLEQRNCYLSGGLRI

Homology

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BLAST of Sgr018468 vs. NCBI nr
Match: XP_022155905.1 (RNA-binding protein 24-A [Momordica charantia])

HSP 1 Score: 555.1 bits (1429), Expect = 3.8e-154
Identity = 267/276 (96.74%), Postives = 273/276 (98.91%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILE
Sbjct: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPP+SYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180
           LRPPA YVGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF
Sbjct: 121 LRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPF 180

Query: 181 LGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240
           LGQQYLQIYG+PGS SPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT
Sbjct: 181 LGQQYLQIYGMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240

Query: 241 SSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           SSP+PTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG
Sbjct: 241 SSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 276

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BLAST of Sgr018468 vs. NCBI nr
Match: XP_022946505.1 (RNA-binding protein 24-A [Cucurbita moschata] >XP_022946506.1 RNA-binding protein 24-A [Cucurbita moschata])

HSP 1 Score: 548.1 bits (1411), Expect = 4.6e-152
Identity = 264/276 (95.65%), Postives = 269/276 (97.46%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQH  GPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGRRANCNLASLGRPRPP+SYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180
           LRPPA+YVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF
Sbjct: 121 LRPPAVYVGGMQPNRGNYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 LGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240
           +GQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYG VHGYAMPSPQIVQF GPNVN LT
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           SSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQG
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQG 276

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BLAST of Sgr018468 vs. NCBI nr
Match: KAG6599081.1 (putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.1 bits (1411), Expect = 4.6e-152
Identity = 264/276 (95.65%), Postives = 269/276 (97.46%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQH  GPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGRRANCNLASLGRPRPP+SYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180
           LRPPA+YVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF
Sbjct: 121 LRPPAVYVGGMQPNRGNYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 LGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240
           +GQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYG VHGYAMPSPQIVQF GPNVN LT
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           SSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQG
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQG 276

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BLAST of Sgr018468 vs. NCBI nr
Match: XP_004146763.1 (RNA-binding protein 24-A [Cucumis sativus] >KGN48031.2 hypothetical protein Csa_003949 [Cucumis sativus])

HSP 1 Score: 547.4 bits (1409), Expect = 7.8e-152
Identity = 267/278 (96.04%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPP+SY  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPLSYGT 120

Query: 121 GRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180
           GRLR PA+YVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNA 240
           PF+GQQYLQIYGVPGSASP IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 278

[Close]

BLAST of Sgr018468 vs. NCBI nr
Match: XP_008464801.1 (PREDICTED: RNA-binding protein 24-A [Cucumis melo])

HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151
Identity = 266/278 (95.68%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPP+S+  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISFGT 120

Query: 121 GRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180
           GRLR PA+YVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNA 240
           PF+GQQYLQIYGVPGSASP IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 278

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BLAST of Sgr018468 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30
Identity = 94/208 (45.19%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 17  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYG 76
           T+S  +N  FGDT  TKVFVGGLAW+T  E M  +F ++G+ILEAV+I+DK T RSKGYG
Sbjct: 2   TTSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYG 61

Query: 77  FVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSYGRLRPPALYV----GGMQ 136
           FVTF+D ++A RAC D TPII+GRRANCNLASLG        GRLR          G   
Sbjct: 62  FVTFKDAKAATRACEDSTPIINGRRANCNLASLG--------GRLRKSPTMTSPQQGPKN 121

Query: 137 PNRGT--YIGNFG-YQQPVSYAYQQ-----GLAYPPYGY--ATYGPEYVYPQG-GY--NP 196
            NR T  ++GN   +  P  +  QQ       A P YGY  A   P   + Q  GY    
Sbjct: 122 GNRATPPHVGNHSQWYYPSGFTNQQHQQQNHQAVPFYGYPSAYVAPNMTFNQKVGYVGGT 181

Query: 197 FLGQQYLQIYGVPGS-ASPAIYHYGQLG 207
           ++   Y Q+   P S   P  YH+   G
Sbjct: 182 YMNGYYAQMQPQPQSQPQPQYYHHHMYG 201

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BLAST of Sgr018468 vs. ExPASy Swiss-Prot
Match: Q9BX46 (RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.1e-29
Identity = 88/220 (40.00%), Postives = 109/220 (49.55%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACADPTPIIDGRRANCNLASLGRPRPPVSYGRLRPPALYVGGMQPNRGTYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R+  P    G  Q +       FG   P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQLHPALIQRPFGI--P 126

Query: 148 VSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFLGQQYLQIYGVPGSASPAIYHYG 207
             Y Y Q    P    P+   T       P   Y  + G  Y Q Y    +A+ A   Y 
Sbjct: 127 AHYVYPQAFVQPGVVIPHVQPTAAAASTTP---YIDYTGAAYAQ-YSAAAAAAAAAAAYD 186

Query: 208 QLGQTV-PGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSS 243
           Q      P   GY T  GY     Q +  + P   A  ++
Sbjct: 187 QYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAA 214

[Close]

BLAST of Sgr018468 vs. ExPASy Swiss-Prot
Match: D3Z4I3 (RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.7e-29
Identity = 87/220 (39.55%), Postives = 110/220 (50.00%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACADPTPIIDGRRANCNLASLGRPRPPVSYGRLRPPALYVGGMQPNRGTYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R+  P    G  Q +       FG   P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQLHPALIQRPFGI--P 126

Query: 148 VSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFLGQQYLQIYGVPGSASPAIYHYG 207
             Y Y Q    P    P+   T       P   Y  + G  Y Q Y    +A+ A   Y 
Sbjct: 127 AHYVYPQAFVQPGVVIPHVQPTAAAASTTP---YIDYTGAAYAQ-YSAAAAAAAAAAAYD 186

Query: 208 QLGQTV-PGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSS 243
           Q      P   GY T  GY+    Q +  + P   A  ++
Sbjct: 187 QYPYAASPAAAGYVTTGGYSYAVQQPITAAAPGTAAAAAA 214

[Close]

BLAST of Sgr018468 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28
Identity = 83/215 (38.60%), Postives = 104/215 (48.37%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACADPTPIIDGRRANCNLASLGRPRPPVSYGRLRPPALYVGGMQPNRGTYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R+  P    G  Q +       FG   P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQIHPALIQRPFGI--P 126

Query: 148 VSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFLGQQYLQIYGVPGSASPAIYHYGQLGQ 207
             Y Y Q    P        P        Y  +    Y Q      +A+   Y Y     
Sbjct: 127 AHYVYPQAYVQPGVVIPHVQPTAATSTSPYIDYTSAAYAQYSAAAAAAAYDQYPYA---- 186

Query: 208 TVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSS 243
             P   GY T  GY    PQ +  + P   A  ++
Sbjct: 187 ASPAATGYVTAAGYGYAVPQPLTAAAPGSAAAAAA 209

[Close]

BLAST of Sgr018468 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-27
Identity = 87/228 (38.16%), Postives = 110/228 (48.25%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACADPTPIIDGRRANCNLASLGRPRPPVSYGRLRPPALYVGGMQPNRGTYIGNFG---- 147
           RAC DP PIIDGR+AN NLA LG      +  R+  P    G  Q +       +G    
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQIHPALVQRPYGIPAH 126

Query: 148 YQQPVSYAYQQGLAYP---PYGYATYGPEYVYPQGGYNPFLGQQYLQIYGVPGSASPAIY 207
           Y  P +Y  QQGL  P       A+  P   Y    Y  +           P +ASPA  
Sbjct: 127 YVYPQAYV-QQGLVIPHVQQTAAASTSPYIDYTSAAYAQYAAAAAAAYDQYPYAASPAT- 186

Query: 208 HYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQ 249
                        GY T  GY    PQ +  + P   A  ++     Q
Sbjct: 187 ------------TGYVTAAGYGYAVPQPLTAATPGTAAAAAAAFAQYQ 214

[Close]

BLAST of Sgr018468 vs. ExPASy TrEMBL
Match: A0A6J1DNT6 (RNA-binding protein 24-A OS=Momordica charantia OX=3673 GN=LOC111022908 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.8e-154
Identity = 267/276 (96.74%), Postives = 273/276 (98.91%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILE
Sbjct: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPP+SYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180
           LRPPA YVGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF
Sbjct: 121 LRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPF 180

Query: 181 LGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240
           LGQQYLQIYG+PGS SPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT
Sbjct: 181 LGQQYLQIYGMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240

Query: 241 SSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           SSP+PTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG
Sbjct: 241 SSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 276

[Close]

BLAST of Sgr018468 vs. ExPASy TrEMBL
Match: A0A6J1G3W1 (RNA-binding protein 24-A OS=Cucurbita moschata OX=3662 GN=LOC111450546 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.2e-152
Identity = 264/276 (95.65%), Postives = 269/276 (97.46%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQH  GPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGRRANCNLASLGRPRPP+SYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180
           LRPPA+YVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF
Sbjct: 121 LRPPAVYVGGMQPNRGNYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 LGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240
           +GQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYG VHGYAMPSPQIVQF GPNVN LT
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           SSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQG
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQG 276

[Close]

BLAST of Sgr018468 vs. ExPASy TrEMBL
Match: A0A5D3CHF9 (RNA-binding protein 24-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00070 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.5e-152
Identity = 266/278 (95.68%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPP+S+  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISFGT 120

Query: 121 GRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180
           GRLR PA+YVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNA 240
           PF+GQQYLQIYGVPGSASP IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 278

[Close]

BLAST of Sgr018468 vs. ExPASy TrEMBL
Match: A0A1S3CME8 (RNA-binding protein 24-A OS=Cucumis melo OX=3656 GN=LOC103502602 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.5e-152
Identity = 266/278 (95.68%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPP+S+  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISFGT 120

Query: 121 GRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180
           GRLR PA+YVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNA 240
           PF+GQQYLQIYGVPGSASP IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 277
           LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQG 278

[Close]

BLAST of Sgr018468 vs. ExPASy TrEMBL
Match: A0A0A0KHA9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G401470 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.9e-151
Identity = 266/277 (96.03%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60
           MAYQH PGPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPP+SY  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPLSYGT 120

Query: 121 GRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180
           GRLR PA+YVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNA 240
           PF+GQQYLQIYGVPGSASP IYHYGQLGQTVPGGHGYG VHGYAMPSPQI+QFSGPNVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ 276
           LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ 277

[Close]

BLAST of Sgr018468 vs. TAIR 10
Match: AT1G76460.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 371.3 bits (952), Expect = 7.2e-103
Identity = 187/286 (65.38%), Postives = 220/286 (76.92%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 60
           MAYQ +PG          SGF  LNSPFGDTT+TKVFVGGLAWETQSET+R++FEQ+GEI
Sbjct: 1   MAYQPVPG----------SGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEI 60

Query: 61  LEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSY 120
           LEAVVI DKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGRRANCNLASLGRPRPP+ Y
Sbjct: 61  LEAVVIADKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPY 120

Query: 121 -------GRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYV 180
                  GRLRP + Y+G +Q  RG+ IGN+ YQQP+ Y YQQG+ Y PYG   YGPEY+
Sbjct: 121 AVIPNMPGRLRPASPYIGNVQGPRGSLIGNYPYQQPLPYNYQQGVVY-PYGVTAYGPEYM 180

Query: 181 Y--PQGGYNPFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIV 240
           Y   QG Y+P++GQQYLQ+YGVPG+ +  +Y YGQL QT+P GHGY  V GY++P   I+
Sbjct: 181 YSQSQGLYSPYMGQQYLQVYGVPGAVNSPVYQYGQLSQTIPNGHGYTAVQGYSVPGSHIL 240

Query: 241 QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ 276
           Q  GP V+ +T+S MP +QAPYPSGIP P   Q   +VHSP QF+Q
Sbjct: 241 QLGGPTVSTMTTSSMPALQAPYPSGIPGPAPVQSHIIVHSP-QFMQ 274

[Close]

BLAST of Sgr018468 vs. TAIR 10
Match: AT1G20880.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 318.2 bits (814), Expect = 7.2e-87
Identity = 169/286 (59.09%), Postives = 203/286 (70.98%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 60
           MAY  IP          SSGF  LNSPFGDTT+TKVFVGGLAWETQSET+RR+F+Q+G+I
Sbjct: 1   MAYHSIP----------SSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDI 60

Query: 61  LEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSY 120
           LEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR RPP+ Y
Sbjct: 61  LEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQY 120

Query: 121 -------GRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYV 180
                  GR+RPP+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PYG   YGP+Y+
Sbjct: 121 AVIPHAPGRVRPPSPYVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVY-PYGVTPYGPDYM 180

Query: 181 Y--PQGGYNPFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIV 240
           Y   QG Y P++GQQYLQ+YGVPG+ +   Y YGQL  T+PG HGY    GY+ P   ++
Sbjct: 181 YSQSQGFYGPYMGQQYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSHPGSHVL 240

Query: 241 QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ 276
           Q          +SPM  IQ+PYPS  P+    Q + +V +P Q++Q
Sbjct: 241 QLG-------ATSPMSAIQSPYPS--PSAPTHQ-RVIVQTPPQYIQ 265

[Close]

BLAST of Sgr018468 vs. TAIR 10
Match: AT1G20880.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 318.2 bits (814), Expect = 7.2e-87
Identity = 169/286 (59.09%), Postives = 203/286 (70.98%), Query Frame = 0


Query: 1   MAYQHIPGPSSISGSSTSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 60
           MAY  IP          SSGF  LNSPFGDTT+TKVFVGGLAWETQSET+RR+F+Q+G+I
Sbjct: 1   MAYHSIP----------SSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDI 60

Query: 61  LEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSY 120
           LEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR RPP+ Y
Sbjct: 61  LEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQY 120

Query: 121 -------GRLRPPALYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYV 180
                  GR+RPP+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PYG   YGP+Y+
Sbjct: 121 AVIPHAPGRVRPPSPYVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVY-PYGVTPYGPDYM 180

Query: 181 Y--PQGGYNPFLGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIV 240
           Y   QG Y P++GQQYLQ+YGVPG+ +   Y YGQL  T+PG HGY    GY+ P   ++
Sbjct: 181 YSQSQGFYGPYMGQQYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSHPGSHVL 240

Query: 241 QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ 276
           Q          +SPM  IQ+PYPS  P+    Q + +V +P Q++Q
Sbjct: 241 QLG-------ATSPMSAIQSPYPS--PSAPTHQ-RVIVQTPPQYIQ 265

[Close]

BLAST of Sgr018468 vs. TAIR 10
Match: AT1G22330.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.7e-48
Identity = 127/260 (48.85%), Postives = 150/260 (57.69%), Query Frame = 0


Query: 17  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYG 76
           +++ +  SPFGDTT+TKVFVGGLAWET ++ MRRYF+QFGEILEAV+ITDK TG+SKGYG
Sbjct: 2   SNTSYYRSPFGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYG 61

Query: 77  FVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPVSYGRLR--PPALYVGGMQPN 136
           FVTFRD +SA RA ADP P+IDGR+ANCN+AS GRPRP    GR +   P+ Y GG Q +
Sbjct: 62  FVTFRDSDSATRAVADPNPVIDGRKANCNIASFGRPRPSTPRGRGQGGSPSQYQGGGQSS 121

Query: 137 RGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFLGQ-QYL--QIYGV 196
                   G   PV  A    L YP YGY TY  EY Y Q  YN  L Q QY   Q+YG 
Sbjct: 122 ------YTGMAAPVQQAAAAQLMYPSYGY-TYNSEYGYHQALYNAQLQQAQYYQQQMYGG 181

Query: 197 PGSASPAI-------YHYGQLGQTVPGGH---GYGTVH--------GYAMPSPQIVQFSG 254
            G+ SP+        Y+Y Q     P  H    Y   H           +PS        
Sbjct: 182 GGATSPSSSNIMPSPYYYLQAPSPRPYLHHQQHYQYHHHQQQQQQQQQRLPSASSYLIYP 241

[Close]

BLAST of Sgr018468 vs. TAIR 10
Match: AT1G78260.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.6e-46
Identity = 122/252 (48.41%), Postives = 145/252 (57.54%), Query Frame = 0


Query: 17  TSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYG 76
           + + +  SPFGDTTYTKVFVGGLAWET ++ MRRYFEQFGEILEAV+ITDKNTG+SKGYG
Sbjct: 2   SQTSYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYG 61

Query: 77  FVTFRDPESARRACADPTPIIDGRRANCNLASLGRPR--PPVSYGRLRPPALYVGGMQPN 136
           FVTFR+ +SA RA ADP P+IDGR+ANCN+AS GRPR  PP   G+   P+ Y  G    
Sbjct: 62  FVTFRESDSATRAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSG---G 121

Query: 137 RGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGP-EYVYPQGGYNPFLG-----QQYLQI 196
             TY    G   P+  A    L YP YGY TY P ++ Y Q  YN  L      QQ  Q+
Sbjct: 122 PSTYT---GMAAPLPPAAAPQLMYPSYGY-TYNPDQFGYHQALYNTQLQQAQYYQQQQQL 181

Query: 197 YG----VPGSA------SPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPN--V 249
           YG     P S+      SP  Y Y      VP  H +     Y        +FS P+  V
Sbjct: 182 YGGGATSPSSSGATIMPSPYYYGYSLQAPRVPYQHHHHLPQPYNPQQHHHQRFSSPSFLV 241

The following BLAST results are available for this feature:

BLAST of Sgr018468 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155905.1	3.8e-154	96.74	RNA-binding protein 24-A [Momordica charantia]	[more]
XP_022946505.1	4.6e-152	95.65	RNA-binding protein 24-A [Cucurbita moschata] >XP_022946506.1 RNA-binding protei...	[more]
KAG6599081.1	4.6e-152	95.65	putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004146763.1	7.8e-152	96.04	RNA-binding protein 24-A [Cucumis sativus] >KGN48031.2 hypothetical protein Csa_...	[more]
XP_008464801.1	1.3e-151	95.68	PREDICTED: RNA-binding protein 24-A [Cucumis melo]	[more]

BLAST of Sgr018468 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	1.6e-30	45.19	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q9BX46	5.1e-29	40.00	RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1	[more]
D3Z4I3	8.7e-29	39.55	RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1	[more]
Q6GQD3	1.5e-28	38.60	RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1	[more]
Q9I8B3	2.1e-27	38.16	RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1	[more]

BLAST of Sgr018468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNT6	1.8e-154	96.74	RNA-binding protein 24-A OS=Momordica charantia OX=3673 GN=LOC111022908 PE=4 SV=...	[more]
A0A6J1G3W1	2.2e-152	95.65	RNA-binding protein 24-A OS=Cucurbita moschata OX=3662 GN=LOC111450546 PE=4 SV=1	[more]
A0A5D3CHF9	6.5e-152	95.68	RNA-binding protein 24-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CME8	6.5e-152	95.68	RNA-binding protein 24-A OS=Cucumis melo OX=3656 GN=LOC103502602 PE=4 SV=1	[more]
A0A0A0KHA9	1.9e-151	96.03	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G401470 PE=4 SV...	[more]

BLAST of Sgr018468 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76460.1	7.2e-103	65.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G20880.1	7.2e-87	59.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G20880.2	7.2e-87	59.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22330.1	1.7e-48	48.85	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G78260.2	1.6e-46	48.41	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 33..105 e-value: 1.8E-24 score: 97.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 34..90 e-value: 2.4E-17 score: 62.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 32..109 score: 17.114126
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 12..120 e-value: 2.3E-25 score: 91.1
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 1..277
None	No IPR available	PANTHER	PTHR11176:SF32	RNA-BINDING PROTEIN 38-LIKE ISOFORM X1	coord: 1..277
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 32..107 e-value: 3.38313E-46 score: 148.532
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 31..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr018468.1	Sgr018468.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding