Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCGGACATTGCAACTCAAGTAATGGGATTCTCAACCTCAAGGGATCTTTGGCAAGGCATTCAAAAGATGTTCAGTGTAGAATCTAGGGCCCAAGAAGATTACCTCTATCAGCTATTTCAACAAACACGCAAAGGTACCAAGAAAGTCATTGAATATCTTTCATTAATGAAATCTTATTATGACTGTCTGACTTTAGCTAGTAATCCTATGACAATGTGACCTTTAATATCTCACATTTTGGCTGGTCTTGATAAGGAATTTAACCCAGTTATTGTGAGTATACAAAACAAGGTAGATAATACGTGGTCTGAGTTACAGGCTGAACTTTTCACTTGGGAGAAAAGACTTGAGCACGAACTGATTCAGAAAACCAGCACCTTAGGCATTCAAGCCACAACCACTGTCAGCTATGTGGGCACCAACAGCAGTGGCAACTTCTCCAAAGGTGAAAGTAGCTCCTCAAATGGTGGAAGAAACTCCAACCAAAATGGTTCTAATTATGGAAATTCTTGAGGGGGAAGAGGAAGAGGTCGCGGTGGACGATACTATCAGAATAATCGGTTGATCTGTCAGGTATGTGAAAAGACAGGACACAATGCAATGATTTGCCATCATCAGTTCAATAAAGAGTTTGGACATCCTTCGAGTCAGTCCAAGCTAACAACTAGTGGGTCTGCCTTCATGTTTCTTGCCTCCCATGAAGTGGTAGCAGATCCTAATTGGTATGCGAATTTCGGTGTAAGTAGCCATGTCACTGCTGATCCAAACAATATTATCATAAGAAACAATTACACTAGTAAGTGTGGGGTATTGGTAGCCAATGGCAGTAAGCTCAATATTTCTTTCACCGGGCAATCTCACTACTATACATCTCCAAAGGTTCTTAAGCTTAAAGACATTCTTTGCGTAACAGATATAACAAAGAATCTGATTAGTGTATCTAAATTAACCCGTGACAATGTCGTATTTATTGAATTTCACTCTAACTATTGTCTCCTTAAGGACAAGGATTCTAGTCAAGTGGTGCTGAAGGGGAGAATTAAAGGCGACCTATATAAGCTCTATCTACCCCCTTGGCCTGTCGAGCAATCTGCAATCATCCAATTCTTGCAACTCTGTTAG
mRNA sequence
ATGATTCCGGACATTGCAACTCAAGTAATGGGATTCTCAACCTCAAGGGATCTTTGGCAAGGCATTCAAAAGATGTTCAGTGTAGAATCTAGGGCCCAAGAAGATTACCTCTATCAGCTATTTCAACAAACACGCAAAGTTATTGTGAGTATACAAAACAAGGTAGATAATACGTGGTCTGAGTTACAGGCTGAACTTTTCACTTGGGAGAAAAGACTTGAGCACGAACTGATTCAGAAAACCAGCACCTTAGGCATTCAAGCCACAACCACTGTCAGCTATGTGGGCACCAACAGCAGTGGCAACTTCTCCAAAGGGGGAAGAGGAAGAGGTCGCGGTGGACGATACTATCAGAATAATCGGTTGATCTGTCAGGTATGTGAAAAGACAGGACACAATGCAATGATTTGCCATCATCAGTTCAATAAAGAGTTTGGACATCCTTCGAGTCAGTCCAAGCTAACAACTAGTGGGTCTGCCTTCATGTTTCTTGCCTCCCATGAAGTGGTAGCAGATCCTAATTGGTATGCGAATTTCGGTGTAAGTAGCCATGTCACTGCTGATCCAAACAATATTATCATAAGAAACAATTACACTAGTAAGTGTGGGGTATTGGTAGCCAATGGCAGTAAGCTCAATATTTCTTTCACCGGGCAATCTCACTACTATACATCTCCAAAGGTTCTTAAGCTTAAAGACATTCTTTGCGTAACAGATATAACAAAGAATCTGATTAGTGTATCTAAATTAACCCGTGACAATGTCGTATTTATTGAATTTCACTCTAACTATTGTCTCCTTAAGGACAAGGATTCTAGTCAAGTGGTGCTGAAGGGGAGAATTAAAGGCGACCTATATAAGCTCTATCTACCCCCTTGGCCTGTCGAGCAATCTGCAATCATCCAATTCTTGCAACTCTGTTAG
Coding sequence (CDS)
ATGATTCCGGACATTGCAACTCAAGTAATGGGATTCTCAACCTCAAGGGATCTTTGGCAAGGCATTCAAAAGATGTTCAGTGTAGAATCTAGGGCCCAAGAAGATTACCTCTATCAGCTATTTCAACAAACACGCAAAGTTATTGTGAGTATACAAAACAAGGTAGATAATACGTGGTCTGAGTTACAGGCTGAACTTTTCACTTGGGAGAAAAGACTTGAGCACGAACTGATTCAGAAAACCAGCACCTTAGGCATTCAAGCCACAACCACTGTCAGCTATGTGGGCACCAACAGCAGTGGCAACTTCTCCAAAGGGGGAAGAGGAAGAGGTCGCGGTGGACGATACTATCAGAATAATCGGTTGATCTGTCAGGTATGTGAAAAGACAGGACACAATGCAATGATTTGCCATCATCAGTTCAATAAAGAGTTTGGACATCCTTCGAGTCAGTCCAAGCTAACAACTAGTGGGTCTGCCTTCATGTTTCTTGCCTCCCATGAAGTGGTAGCAGATCCTAATTGGTATGCGAATTTCGGTGTAAGTAGCCATGTCACTGCTGATCCAAACAATATTATCATAAGAAACAATTACACTAGTAAGTGTGGGGTATTGGTAGCCAATGGCAGTAAGCTCAATATTTCTTTCACCGGGCAATCTCACTACTATACATCTCCAAAGGTTCTTAAGCTTAAAGACATTCTTTGCGTAACAGATATAACAAAGAATCTGATTAGTGTATCTAAATTAACCCGTGACAATGTCGTATTTATTGAATTTCACTCTAACTATTGTCTCCTTAAGGACAAGGATTCTAGTCAAGTGGTGCTGAAGGGGAGAATTAAAGGCGACCTATATAAGCTCTATCTACCCCCTTGGCCTGTCGAGCAATCTGCAATCATCCAATTCTTGCAACTCTGTTAG
Protein sequence
MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRKVIVSIQNKVDNTWSELQAELFTWEKRLEHELIQKTSTLGIQATTTVSYVGTNSSGNFSKGGRGRGRGGRYYQNNRLICQVCEKTGHNAMICHHQFNKEFGHPSSQSKLTTSGSAFMFLASHEVVADPNWYANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTSPKVLKLKDILCVTDITKNLISVSKLTRDNVVFIEFHSNYCLLKDKDSSQVVLKGRIKGDLYKLYLPPWPVEQSAIIQFLQLC
Homology
BLAST of Sgr018407 vs. NCBI nr
Match:
TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 203.8 bits (517), Expect = 2.2e-48
Identity = 129/363 (35.54%), Postives = 190/363 (52.34%), Query Frame = 0
Query: 5 IATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK------------------ 64
IA Q+MGF+ ++DLW+ Q +F V+SRA+ED+L Q+FQ TRK
Sbjct: 45 IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104
Query: 65 ---------------------------VIVSIQNKVDNTWSELQAELFTWEKRLEHELIQ 124
VI IQ K + +W ++Q+EL T+EKRLEH+ Q
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164
Query: 125 KTSTLGIQATTTVSYVGTNS-------------SGNFSKG-------GRGRGRGGRYYQN 184
K + IQ ++ +S + N S+G GRGRG+G +
Sbjct: 165 KNTENIIQNVVNIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGKG----RG 224
Query: 185 NRLICQVCEKTGHNAMICHHQFNKEFGHP------------SSQSKLT--TSGSAFMFLA 244
N+ CQVCEK GH+A++C+++FNKEF P S S LT +G + A
Sbjct: 225 NKPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFSKHSNLTVLVTGQSVNQFA 284
Query: 245 SHEVVADPNWYANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTS 289
+ + V + NWY + G ++H+T + +N+ + Y+ ++V NG L+IS+ G ++
Sbjct: 285 TADTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEKIMVGNGDSLHISYIGNAYLTDG 344
BLAST of Sgr018407 vs. NCBI nr
Match:
XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])
HSP 1 Score: 202.2 bits (513), Expect = 6.4e-48
Identity = 119/304 (39.14%), Postives = 171/304 (56.25%), Query Frame = 0
Query: 1 MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK--------VIVSIQ 60
M PD+A Q+MGF+ DLW Q F V+SRA+ED+L Q+ Q TRK VIV IQ
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQ 182
Query: 61 NKVDNTWSELQAELFTWEKRLEHELIQKTSTLGIQATTTVSYV--------GTNSSGNFS 120
K D +W ++Q++L +EKRL+H+ QK +T I + ++ S+ F
Sbjct: 183 GKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSNKKFY 242
Query: 121 KGGRGRGRGGRYYQNNRLICQVCEKTGHNAMICHHQFNKEFGHP--------SSQSKLTT 180
R G R NN CQ+C K GH+A++C+++FNKEF P SS ++
Sbjct: 243 GYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSP 302
Query: 181 SGSAFMF------LASHEVVADPNWYANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGS 240
+ + F+ A+ + V DPNWY + G ++HVT + +N+ Y+ V V NG+
Sbjct: 303 NPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGN 362
Query: 241 KLNISFTGQSHYYTSPKVLKLKDILCVTDITKNLISVSKLTRDNVVFIEFHSNYCLLKDK 275
+LNIS+ G + K L LK+ILCV DI KNLISVSKL +DN ++IEFH C +KDK
Sbjct: 363 RLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVSKLAQDNHIYIEFHGYCCFIKDK 422
BLAST of Sgr018407 vs. NCBI nr
Match:
KYP50444.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])
HSP 1 Score: 169.1 bits (427), Expect = 6.0e-38
Identity = 115/348 (33.05%), Postives = 171/348 (49.14%), Query Frame = 0
Query: 1 MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK-------------- 60
M ++ATQ++ TS+ +W+ Q + +R++ +L F +TRK
Sbjct: 1 MTQEVATQLLHCETSQQIWEDAQSLAGAHTRSRITFLKTEFHRTRKGGLKMEEYLTKMKE 60
Query: 61 -------------------------------VIVSIQNKVDNTWSELQAELFTWEKRLEH 120
++V + +K TW E+QA+L T+E RLE
Sbjct: 61 IADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQLLTYENRLEQ 120
Query: 121 ELIQKTSTLGIQATTTVSYVGTNSSGNFSKGGRGRG-------RGGR---YYQNNRLICQ 180
I S L + ++ +S + N G + G GRG RGGR +R++CQ
Sbjct: 121 --INNQSNLTLNPSSNISTILYNRRGKSNAFGGGRGGQINRGARGGRGRGRATKDRIVCQ 180
Query: 181 VCEKTGHNAMICHHQFNKEF-GHPSSQSK----LTTSGSAFMFLASHEVVADPNWYANFG 240
VC K GH A C+H+FNK + G S + K + + ++AS V D +WY + G
Sbjct: 181 VCCKPGHAASHCYHRFNKNYIGQNSDEQKSEKDKEQNYNFNAYVASPSTVEDLDWYFDSG 240
Query: 241 VSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTSPKVLKLKDILCVTDI 289
S+HVT D N + N K + V NG+ L I G S T K L LKDIL V I
Sbjct: 241 ASNHVTYDQNKVQEVNENDGKSFLTVGNGANLKIIACGDSSLDTQQKSLNLKDILYVPKI 300
BLAST of Sgr018407 vs. NCBI nr
Match:
KYP75308.1 (hypothetical protein KK1_008029 [Cajanus cajan])
HSP 1 Score: 161.0 bits (406), Expect = 1.6e-35
Identity = 114/352 (32.39%), Postives = 172/352 (48.86%), Query Frame = 0
Query: 1 MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK-------------- 60
M +ATQ++ TS++LW+G Q + +R++ L F +RK
Sbjct: 1 MTEGVATQLLHCETSKELWEGAQSLVGAHTRSRVTLLKTEFHSSRKGSMKMEEYLIKMKL 60
Query: 61 -------------------------------VIVSIQNKVDNTWSELQAELFTWEKRLEH 120
+IV + +K D TW ++QA+L T+E RLE
Sbjct: 61 LADSLKLAGSPISNTDLITQTLAGLDINYNAIIVQLSDKNDLTWIDMQAQLLTFENRLEQ 120
Query: 121 ELIQKTSTLGIQATTTV---------------SYVGTNSSGNFSKGGRGRGRGGRYYQNN 180
+ S+L + + V S+ G N G ++GGRGRGR R +
Sbjct: 121 --LNSLSSLTLSPSPNVVTRFDQKVNRSNNRGSWRGNNFRG--TRGGRGRGRLSR----D 180
Query: 181 RLICQVCEKTGHNAMICHHQFNKEFGHPSSQSKLTTSGSAFM----FLASHEVVADPNWY 240
+ CQVCEK GH A+ C ++F+K + SS K +AF+ F AS + DP WY
Sbjct: 181 KPTCQVCEKIGHIAVQCFYRFDKSYMGQSSDDK-QEKHNAFIASPNFNASSNSIRDPEWY 240
Query: 241 ANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTSPKVLKLKDILC 289
+ G S+HVT DPN + + K ++V NG +L I G + T + L L D+L
Sbjct: 241 FDSGASNHVTHDPNQFQEISEHDGKTSLVVGNGERLKIHAYGTAALDTCQRSLNLHDLLY 300
BLAST of Sgr018407 vs. NCBI nr
Match:
TXG55646.1 (hypothetical protein EZV62_020902 [Acer yangbiense])
HSP 1 Score: 160.2 bits (404), Expect = 2.8e-35
Identity = 109/363 (30.03%), Postives = 174/363 (47.93%), Query Frame = 0
Query: 1 MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK-------------- 60
M ++A VMG +T+ LW+ ++ +F S+++ + + Q TRK
Sbjct: 122 MTENVALSVMGSTTAAGLWKALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKT 181
Query: 61 -------------------------------VIVSIQNKVDNTWSELQAELFTWEKRLEH 120
++V I+ + TW E+ L +++ +LEH
Sbjct: 182 WADSLAIAGDPYPENLLFANILAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEH 241
Query: 121 ELIQKTSTLGIQATTTVSYVGTNSSGNFSK--------------------------GGRG 180
I S G ++ +++ TN N GGR
Sbjct: 242 --INNVSAKGNLLSSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRF 301
Query: 181 RGRGGRYYQNNRLICQVCEKTGHNAMICHHQFNKEFGHPSSQSKLTTSGSAFMFLASHEV 240
RGRGGR N+R CQVC K GH+A +C+ +++ + S + + + S +F+A+ E
Sbjct: 302 RGRGGR-NNNSRPTCQVCGKFGHSASVCYFRYDDNY-MGSVPTANSNANSPSVFVATPET 361
Query: 241 VADPNWYANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTSPK-V 292
V D WYA+ G ++HVT D N+ +++NY ++V NG +L+IS G + K
Sbjct: 362 VDDTTWYADSGATNHVTNDAGNLDLKSNYRGDESLMVGNGKQLDISHVGLKSLPSLTKHS 421
BLAST of Sgr018407 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 5.5e-18
Identity = 70/214 (32.71%), Postives = 101/214 (47.20%), Query Frame = 0
Query: 97 TNSSGNFSKGGRGRGRGGRYYQNNRLICQVCEKTGHNAMICH--HQFNKEFGHPSSQSKL 156
+NS S G R R + Y CQ+C GH+A C HQF S S
Sbjct: 234 SNSWQPSSSGSRSDNRQPKPYLGR---CQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPF 293
Query: 157 TTSGSAFMFLASHEVVADPNWYANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNI 216
T LA + NW + G + H+T+D NN+ YT V++A+GS + I
Sbjct: 294 -TPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPI 353
Query: 217 SFTGQSHYYTSPKVLKLKDILCVTDITKNLISVSKLTRDNVVFIEFHSNYCLLKDKDSSQ 276
+ TG + TS + L L +L V +I KNLISV +L N V +EF +KD ++
Sbjct: 354 THTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGV 413
Query: 277 VVLKGRIKGDLYKLYLPPWPVEQS-AIIQFLQLC 308
+L+G+ K +LY+ WP+ S A+ F C
Sbjct: 414 PLLQGKTKDELYE-----WPIASSQAVSMFASPC 438
BLAST of Sgr018407 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 2.3e-16
Identity = 82/289 (28.37%), Postives = 125/289 (43.25%), Query Frame = 0
Query: 34 EDYLYQLFQQTRKVIVSIQNK-VDNTWSELQAELFTWEKRLEHELIQKTSTLGIQATTTV 93
E L L ++ + VI I K T +E+ L E ++ L ++T+ V
Sbjct: 170 ERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKI---LAVSSATVIPITANAV 229
Query: 94 SYVGTNSSGNFSKGGRGRGRGGRYYQNNRL---------------------ICQVCEKTG 153
S+ T ++ N + G R R NN CQ+C G
Sbjct: 230 SHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQG 289
Query: 154 HNAMICHHQFNKEFGHPSSQSKLT--TSGSAFMFLASHEVVADPNWYANFGVSSHVTADP 213
H+A C Q +SQ + T LA + NW + G + H+T+D
Sbjct: 290 HSAKRC-SQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDF 349
Query: 214 NNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTSPKVLKLKDILCVTDITKNLISVSK 273
NN+ + YT V+VA+GS + IS TG + T + L L +IL V +I KNLISV +
Sbjct: 350 NNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 409
Query: 274 LTRDNVVFIEFHSNYCLLKDKDSSQVVLKGRIKGDLYKLYLPPWPVEQS 299
L N V +EF +KD ++ +L+G+ K +LY+ WP+ S
Sbjct: 410 LCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE-----WPIASS 449
BLAST of Sgr018407 vs. ExPASy TrEMBL
Match:
A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)
HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48
Identity = 129/363 (35.54%), Postives = 190/363 (52.34%), Query Frame = 0
Query: 5 IATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK------------------ 64
IA Q+MGF+ ++DLW+ Q +F V+SRA+ED+L Q+FQ TRK
Sbjct: 45 IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104
Query: 65 ---------------------------VIVSIQNKVDNTWSELQAELFTWEKRLEHELIQ 124
VI IQ K + +W ++Q+EL T+EKRLEH+ Q
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164
Query: 125 KTSTLGIQATTTVSYVGTNS-------------SGNFSKG-------GRGRGRGGRYYQN 184
K + IQ ++ +S + N S+G GRGRG+G +
Sbjct: 165 KNTENIIQNVVNIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGKG----RG 224
Query: 185 NRLICQVCEKTGHNAMICHHQFNKEFGHP------------SSQSKLT--TSGSAFMFLA 244
N+ CQVCEK GH+A++C+++FNKEF P S S LT +G + A
Sbjct: 225 NKPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFSKHSNLTVLVTGQSVNQFA 284
Query: 245 SHEVVADPNWYANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTS 289
+ + V + NWY + G ++H+T + +N+ + Y+ ++V NG L+IS+ G ++
Sbjct: 285 TADTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEKIMVGNGDSLHISYIGNAYLTDG 344
BLAST of Sgr018407 vs. ExPASy TrEMBL
Match:
A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 202.2 bits (513), Expect = 3.1e-48
Identity = 119/304 (39.14%), Postives = 171/304 (56.25%), Query Frame = 0
Query: 1 MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK--------VIVSIQ 60
M PD+A Q+MGF+ DLW Q F V+SRA+ED+L Q+ Q TRK VIV IQ
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQ 182
Query: 61 NKVDNTWSELQAELFTWEKRLEHELIQKTSTLGIQATTTVSYV--------GTNSSGNFS 120
K D +W ++Q++L +EKRL+H+ QK +T I + ++ S+ F
Sbjct: 183 GKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSNKKFY 242
Query: 121 KGGRGRGRGGRYYQNNRLICQVCEKTGHNAMICHHQFNKEFGHP--------SSQSKLTT 180
R G R NN CQ+C K GH+A++C+++FNKEF P SS ++
Sbjct: 243 GYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSP 302
Query: 181 SGSAFMF------LASHEVVADPNWYANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGS 240
+ + F+ A+ + V DPNWY + G ++HVT + +N+ Y+ V V NG+
Sbjct: 303 NPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGN 362
Query: 241 KLNISFTGQSHYYTSPKVLKLKDILCVTDITKNLISVSKLTRDNVVFIEFHSNYCLLKDK 275
+LNIS+ G + K L LK+ILCV DI KNLISVSKL +DN ++IEFH C +KDK
Sbjct: 363 RLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVSKLAQDNHIYIEFHGYCCFIKDK 422
BLAST of Sgr018407 vs. ExPASy TrEMBL
Match:
A0A151S6M8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_027809 PE=4 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 2.9e-38
Identity = 115/348 (33.05%), Postives = 171/348 (49.14%), Query Frame = 0
Query: 1 MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK-------------- 60
M ++ATQ++ TS+ +W+ Q + +R++ +L F +TRK
Sbjct: 1 MTQEVATQLLHCETSQQIWEDAQSLAGAHTRSRITFLKTEFHRTRKGGLKMEEYLTKMKE 60
Query: 61 -------------------------------VIVSIQNKVDNTWSELQAELFTWEKRLEH 120
++V + +K TW E+QA+L T+E RLE
Sbjct: 61 IADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQLLTYENRLEQ 120
Query: 121 ELIQKTSTLGIQATTTVSYVGTNSSGNFSKGGRGRG-------RGGR---YYQNNRLICQ 180
I S L + ++ +S + N G + G GRG RGGR +R++CQ
Sbjct: 121 --INNQSNLTLNPSSNISTILYNRRGKSNAFGGGRGGQINRGARGGRGRGRATKDRIVCQ 180
Query: 181 VCEKTGHNAMICHHQFNKEF-GHPSSQSK----LTTSGSAFMFLASHEVVADPNWYANFG 240
VC K GH A C+H+FNK + G S + K + + ++AS V D +WY + G
Sbjct: 181 VCCKPGHAASHCYHRFNKNYIGQNSDEQKSEKDKEQNYNFNAYVASPSTVEDLDWYFDSG 240
Query: 241 VSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTSPKVLKLKDILCVTDI 289
S+HVT D N + N K + V NG+ L I G S T K L LKDIL V I
Sbjct: 241 ASNHVTYDQNKVQEVNENDGKSFLTVGNGANLKIIACGDSSLDTQQKSLNLKDILYVPKI 300
BLAST of Sgr018407 vs. ExPASy TrEMBL
Match:
A0A803PME5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 168.7 bits (426), Expect = 3.8e-38
Identity = 111/342 (32.46%), Postives = 174/342 (50.88%), Query Frame = 0
Query: 1 MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRK-------------- 60
+ P I +QV+ TS ++W+ ++ +FS SRA+ L Q RK
Sbjct: 849 LTPPILSQVVRCRTSHEVWRALETLFSSRSRARIMDLKNQLQSFRKGALTISEYCARMES 908
Query: 61 -------------------------------VIVSIQNKVDNTWSELQAELFTWEKRLEH 120
VI SI ++ + E+Q+ L + E RL
Sbjct: 909 ISDTLLLADACVPEDDLIMSILNGLPAEYDGVINSILSQGNMNVQEVQSLLLSQENRLHR 968
Query: 121 ELIQKTSTLGIQATTT---VSYVGTNSSGNFSKG---GRGRGRGGRYYQNNRLICQVCEK 180
T+ + + + +S+ G S+ N S+G GRGR RG ++++CQ+C K
Sbjct: 969 --WHTTTIIEVPPSANHAQISHRGRGSNSNRSRGAHRGRGRARGSSKGTGSKIVCQICTK 1028
Query: 181 TGHNAMICHHQFNKEFGHPSSQSKLTTSGSAFMFLASHEVVADPNWYANFGVSSHVTADP 240
GH+A+ C ++ ++ PS S + + FLA+ E V DP WYA+ G + H+TAD
Sbjct: 1029 PGHSAVDCWYRHEEDSTPPSQPSNGDNTNTKAAFLATPETVIDPAWYADTGATDHITADV 1088
Query: 241 NNIIIRNNYTSKCGVLVANGSKLNISFTGQSHYYTSP--KVLKLKDILCVTDITKNLISV 290
NN+ + N+Y ++VANG L IS TG +SP + L D+LCV +I K+LIS+
Sbjct: 1089 NNLNLHNDYHGSEKLMVANGELLPISHTGTVFLNSSPHNTPITLHDVLCVPNIKKSLISI 1148
BLAST of Sgr018407 vs. ExPASy TrEMBL
Match:
A0A803P4G6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 1.6e-36
Identity = 115/324 (35.49%), Postives = 178/324 (54.94%), Query Frame = 0
Query: 1 MIPDIATQVMGFSTSRDLWQGIQKMFSVESRAQEDYLYQLFQQTRKVIVSIQNKVDNTWS 60
M IAT+VMG ST+ +LW ES + L L + +IV I+ + TW
Sbjct: 112 MTETIATEVMGTSTAAELWHDPYP----ESHLISNVLSGLGAEYLTIIVQIEARSKTTWQ 171
Query: 61 ELQAELFTWEKRLEH------------------ELIQKTSTLGIQATTTVSYVGTNSSGN 120
LQ L +++ ++E ++ KT G + S TN++G
Sbjct: 172 ALQDLLLSFDSKVERMQSLEGPKTTPPPVASQANMVAKTPPQG-RGRGFYSQNQTNNNGG 231
Query: 121 FSKGGRGRGRGGRYYQNNRLICQVCEKTGHNAMICHHQFNKEF-GH-PSSQSKLTTSGSA 180
GR RGR GRY N+R CQVC K GH+A +C++++++ F GH P++Q++ +A
Sbjct: 232 RGSRGRSRGR-GRYNNNSRPTCQVCGKFGHSAAVCYNRYDENFMGHDPNAQNQQKQGHNA 291
Query: 181 FMFLASHEVVADPNWYANFGVSSHVTADPNNIIIRNNYTSKCGVLVANGSKLNISFTGQS 240
F+A+ +++ W+ + G S+H+T+ N++ ++ Y K + V +GSKL IS G
Sbjct: 292 --FIATPKMLDSDAWFVDSGASNHITSATNSMSQKSEYGGKETLTVGDGSKLAISHIGTG 351
Query: 241 HYYT-SPKVLKLKDILCVTDITKNLISVSKLTRDNVVFIEFHSNYCLLKDKDSSQVVLKG 300
T S ++L LK +L V I KNLISV KLT DN V IEF+S+ CL+KDK + +V+L+G
Sbjct: 352 FLKTNSGQLLMLKQMLHVPKIAKNLISVLKLTTDNNVLIEFYSDVCLVKDKTTKKVLLQG 411
Query: 301 RIKGDLYKLYLPPWPVEQSAIIQF 304
+K LY++ P P +SA+I F
Sbjct: 412 VLKDGLYQIQ-HPHPQPRSALISF 426
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK05754.1 | 2.2e-48 | 35.54 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
XP_016902197.1 | 6.4e-48 | 39.14 | PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo] | [more] |
KYP50444.1 | 6.0e-38 | 33.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | [more] |
KYP75308.1 | 1.6e-35 | 32.39 | hypothetical protein KK1_008029 [Cajanus cajan] | [more] |
TXG55646.1 | 2.8e-35 | 30.03 | hypothetical protein EZV62_020902 [Acer yangbiense] | [more] |
Match Name | E-value | Identity | Description | |
Q9ZT94 | 5.5e-18 | 32.71 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 2.3e-16 | 28.37 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C373 | 1.1e-48 | 35.54 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A1S4E1U6 | 3.1e-48 | 39.14 | uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A151S6M8 | 2.9e-38 | 33.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... | [more] |
A0A803PME5 | 3.8e-38 | 32.46 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803P4G6 | 1.6e-36 | 35.49 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |