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Sgr018404 (gene) Monk fruit (Qingpiguo) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTATTGGGGGTGAAAAAGGGTCTGCATCAACAAAGACACCAGCGGACTTTCTCAAATCGATTCGGGGCCGTCCAGTAGTTGTGAAACTCAATTCTGGTGTTGACTACCGAGGTATATTTGCTTTTTCCCCTTTGATAAGTCTCTACATGTTCAATTTGGTTTATTCTTAGAATCATGTCTTTACTTTTAAGAATCTGATAGATGTTGAGGAAAAAGAATTACGTCAAATGTTGAGGCACTATCCTTTGTTTTGTTCACAGACCAGTAATTGTATTACGTGCAATTTCTTATTCTTCAAACCTATGAAACAAATGATGTTAGATTTTAGACAAAAACATTTTTTTTCTTTGTATTTTTGTTTTATCTCCTTCAGTATAACTATTGAAAATCAGATCTACTCGTGAACACATGGATTGTATCATGATCCATATGCCCCCACCTAGTCTGATAAAGCAAAACATTTATTCTGGATTTTAATGTTATGATCCTATTATATGTTCTTTGTAAAGGTATTTTAGCTTGTCTCGACGGATACATGAATATAGCAATGGAGCAGACTGAGGAATACGTAAATGGGCAGTTGAAGAACAAATATGGCGATGCTTTCATCCGTGGAAATAATGGTAAATATTAAAGTAGGTCGTTGATGATTCCTCGTTGTTTTGAGAATAATATGACCTTCCATTTTCTTAATGCAGTTCTTTACATCAGTACGTCGAAGAGGACATTATCAGAAGGGTCTTCTTAGCTTAGCTAAGAAAATTCTCCCAGGAAATGCACATCTTTTGCAGTTATGTTCCTTCAGAGTCTCTCTCTCATGCTGTAAAATGAGAGATTGA ATGAGTATTGGGGGTGAAAAAGGGTCTGCATCAACAAAGACACCAGCGGACTTTCTCAAATCGATTCGGGGCCGTCCAGTAGTTGTGAAACTCAATTCTGGTGTTGACTACCGAGGTATTTTAGCTTGTCTCGACGGATACATGAATATAGCAATGGAGCAGACTGAGGAATACGTAAATGGGCAGTTGAAGAACAAATATGGCGATGCTTTCATCCGTGGAAATAATGTACGTCGAAGAGGACATTATCAGAAGGGTCTTCTTAGCTTAGCTAAGAAAATTCTCCCAGGAAATGCACATCTTTTGCAGTTATGTTCCTTCAGAGTCTCTCTCTCATGCTGTAAAATGAGAGATTGA ATGAGTATTGGGGGTGAAAAAGGGTCTGCATCAACAAAGACACCAGCGGACTTTCTCAAATCGATTCGGGGCCGTCCAGTAGTTGTGAAACTCAATTCTGGTGTTGACTACCGAGGTATTTTAGCTTGTCTCGACGGATACATGAATATAGCAATGGAGCAGACTGAGGAATACGTAAATGGGCAGTTGAAGAACAAATATGGCGATGCTTTCATCCGTGGAAATAATGTACGTCGAAGAGGACATTATCAGAAGGGTCTTCTTAGCTTAGCTAAGAAAATTCTCCCAGGAAATGCACATCTTTTGCAGTTATGTTCCTTCAGAGTCTCTCTCTCATGCTGTAAAATGAGAGATTGA MSIGGEKGSASTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVRRRGHYQKGLLSLAKKILPGNAHLLQLCSFRVSLSCCKMRD Homology
BLAST of Sgr018404 vs. NCBI nr
Match: XP_022942161.1 (sm-like protein LSM36B isoform X2 [Cucurbita moschata]) HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35 Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of Sgr018404 vs. NCBI nr
Match: XP_004140401.1 (sm-like protein LSM36B [Cucumis sativus] >XP_008460221.1 PREDICTED: sm-like protein LSM36B [Cucumis melo] >XP_011655091.1 sm-like protein LSM36B [Cucumis sativus] >XP_022155112.1 sm-like protein LSM36B [Momordica charantia] >XP_031742218.1 sm-like protein LSM36B [Cucumis sativus] >XP_031742219.1 sm-like protein LSM36B [Cucumis sativus] >XP_031742220.1 sm-like protein LSM36B [Cucumis sativus] >XP_031742221.1 sm-like protein LSM36B [Cucumis sativus] >XP_038877209.1 sm-like protein LSM36B [Benincasa hispida] >XP_038877210.1 sm-like protein LSM36B [Benincasa hispida] >KGN50806.1 hypothetical protein Csa_018833 [Cucumis sativus]) HSP 1 Score: 158.7 bits (400), Expect = 3.1e-35 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Sgr018404 vs. NCBI nr
Match: KAG6600796.1 (Eukaryotic translation initiation factor 2 subunit 3, Y-linked, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157.1 bits (396), Expect = 9.1e-35 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Sgr018404 vs. NCBI nr
Match: XP_022942809.1 (U6 snRNA-associated Sm-like protein LSm6 [Cucurbita moschata] >XP_022942810.1 U6 snRNA-associated Sm-like protein LSm6 [Cucurbita moschata] >XP_022942811.1 U6 snRNA-associated Sm-like protein LSm6 [Cucurbita moschata] >XP_023513637.1 U6 snRNA-associated Sm-like protein LSm6 [Cucurbita pepo subsp. pepo] >XP_023513644.1 U6 snRNA-associated Sm-like protein LSm6 [Cucurbita pepo subsp. pepo] >XP_023513651.1 U6 snRNA-associated Sm-like protein LSm6 [Cucurbita pepo subsp. pepo] >KAG7031436.1 Sm-like protein LSM36B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 157.1 bits (396), Expect = 9.1e-35 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Sgr018404 vs. NCBI nr
Match: XP_022974953.1 (U6 snRNA-associated Sm-like protein LSm6 [Cucurbita maxima] >XP_022974991.1 U6 snRNA-associated Sm-like protein LSm6 [Cucurbita maxima] >XP_022975016.1 U6 snRNA-associated Sm-like protein LSm6 [Cucurbita maxima]) HSP 1 Score: 157.1 bits (396), Expect = 9.1e-35 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy Swiss-Prot
Match: O22823 (Sm-like protein LSM36B OS=Arabidopsis thaliana OX=3702 GN=LSM6B PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 5.2e-33 Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy Swiss-Prot
Match: Q9M1Z3 (Sm-like protein LSM6A OS=Arabidopsis thaliana OX=3702 GN=LSM6A PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.6e-32 Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy Swiss-Prot
Match: P62312 (U6 snRNA-associated Sm-like protein LSm6 OS=Homo sapiens OX=9606 GN=LSM6 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 5.9e-29 Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy Swiss-Prot
Match: P62313 (U6 snRNA-associated Sm-like protein LSm6 OS=Mus musculus OX=10090 GN=Lsm6 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 5.9e-29 Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy Swiss-Prot
Match: A8NHT8 (U6 snRNA-associated Sm-like protein LSm6 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) OX=240176 GN=LSM6 PE=3 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-22 Identity = 50/66 (75.76%), Postives = 58/66 (87.88%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy TrEMBL
Match: A0A6J1FN26 (sm-like protein LSM36B isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447304 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 6.8e-36 Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy TrEMBL
Match: A0A0A0KSS9 (Sm domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G266840 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy TrEMBL
Match: A0A6J1DNH0 (sm-like protein LSM36B OS=Momordica charantia OX=3673 GN=LOC111022247 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy TrEMBL
Match: A0A1S3CBJ6 (sm-like protein LSM36B OS=Cucumis melo OX=3656 GN=LOC103499106 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Sgr018404 vs. ExPASy TrEMBL
Match: A0A6J1IHU4 (U6 snRNA-associated Sm-like protein LSm6 OS=Cucurbita maxima OX=3661 GN=LOC111473750 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.4e-35 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Sgr018404 vs. TAIR 10
Match: AT2G43810.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 141.7 bits (356), Expect = 3.7e-34 Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of Sgr018404 vs. TAIR 10
Match: AT2G43810.2 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 141.7 bits (356), Expect = 3.7e-34 Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of Sgr018404 vs. TAIR 10
Match: AT3G59810.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33 Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of Sgr018404 vs. TAIR 10
Match: AT4G30220.1 (small nuclear ribonucleoprotein F ) HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of Sgr018404 vs. TAIR 10
Match: AT4G30220.2 (small nuclear ribonucleoprotein F ) HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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