Sgr018399 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018399
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	tig00153197: 1343768 .. 1344112 (+)
RNA-Seq Expression	Sgr018399
Synteny	Sgr018399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCTGATATTGCAACCCAAGTCATGGGGTTTGAAAATGCGAAGAATCTGTGGGCAGCCATCCTGGAACTCTTCGGTGTTCAGTCACTAGCTGAGGAAGACTATCTCTGCCAGGTATTTCAACAAACTCATAAAAGGTCTCTAAAAATGGCTGACTACTTGCTTGTGATGAAGTCTCATGCAGATAACTTAAGTCAAGCCGGAAGTCCTGTTGCTGTCTGCTTCTTGATTTCCCAAGTGTTACTGGGGTTGGATGAAGAGTATAACCCAGTGGTTGCGATGATTCAAGGAAGAGTAGGCATCCCATGGCCTGAAATGCAAGCAGAACTGCTTATTTTTTAG

mRNA sequence

ATGACTCCTGATATTGCAACCCAAGTCATGGGGTTTGAAAATGCGAAGAATCTGTGGGCAGCCATCCTGGAACTCTTCGGTGTTCAGTCACTAGCTGAGGAAGACTATCTCTGCCAGGTATTTCAACAAACTCATAAAAGGTCTCTAAAAATGGCTGACTACTTGCTTGTGATGAAGTCTCATGCAGATAACTTAAGTCAAGCCGGAAGTCCTGTTGCTGTCTGCTTCTTGATTTCCCAAGTGTTACTGGGGTTGGATGAAGAGTATAACCCAGTGGTTGCGATGATTCAAGGAAGAGTAGGCATCCCATGGCCTGAAATGCAAGCAGAACTGCTTATTTTTTAG

Coding sequence (CDS)

ATGACTCCTGATATTGCAACCCAAGTCATGGGGTTTGAAAATGCGAAGAATCTGTGGGCAGCCATCCTGGAACTCTTCGGTGTTCAGTCACTAGCTGAGGAAGACTATCTCTGCCAGGTATTTCAACAAACTCATAAAAGGTCTCTAAAAATGGCTGACTACTTGCTTGTGATGAAGTCTCATGCAGATAACTTAAGTCAAGCCGGAAGTCCTGTTGCTGTCTGCTTCTTGATTTCCCAAGTGTTACTGGGGTTGGATGAAGAGTATAACCCAGTGGTTGCGATGATTCAAGGAAGAGTAGGCATCCCATGGCCTGAAATGCAAGCAGAACTGCTTATTTTTTAG

Protein sequence

MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKSHADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF

Homology

[Close]

BLAST of Sgr018399 vs. NCBI nr
Match: XP_022148963.1 (uncharacterized protein LOC111017501 [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39
Identity = 88/110 (80.00%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           MTP++ATQVMG+ENA +LWAAI ELFGVQS AEEDYL QVFQQT K SLKM D+L VMKS
Sbjct: 53  MTPEVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKS 112

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAE 111
           HADNL QAGSPV    LISQVLLGLDEEYNPVVA IQG+ GI WPEMQAE
Sbjct: 113 HADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAE 162

[Close]

BLAST of Sgr018399 vs. NCBI nr
Match: XP_038902487.1 (uncharacterized protein LOC120089143 [Benincasa hispida])

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 75/114 (65.79%), Postives = 86/114 (75.44%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           MT ++A QVMG+EN K LWAAI ELFG+QS A EDYL QVFQQT K ++KM +YL VMK+
Sbjct: 151 MTAEVAMQVMGYENYKYLWAAIQELFGLQSRAGEDYLRQVFQQTCKGAMKMPEYLRVMKT 210

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF 115
           H+DNL   GSPV    L+SQVLLGLDEE+NP VA IQGR  I W  MQ ELL F
Sbjct: 211 HSDNLGLTGSPVPTRALVSQVLLGLDEEFNPFVATIQGRSEISWTNMQTELLAF 264

[Close]

BLAST of Sgr018399 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 145.6 bits (366), Expect = 2.6e-31
Identity = 72/114 (63.16%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           M  D+A QVMGF  ++ LW A+ ELFGVQS AE DYL QVFQQT K SL+M +YL +MKS
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF 115
           HADNL+ AGS V+V  L+SQVL GLDEEYNP+V  +QG+V + W EM AELL +
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTY 231

[Close]

BLAST of Sgr018399 vs. NCBI nr
Match: XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida])

HSP 1 Score: 144.1 bits (362), Expect = 7.7e-31
Identity = 72/114 (63.16%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           MTP++A QVMG E AK+LW +I +LFGVQS  EEDYL  VFQ T K +LKM +YL  MK 
Sbjct: 64  MTPEVAIQVMGCECAKDLWTSIPQLFGVQSRVEEDYLRHVFQTTRKGNLKMEEYLQTMKM 123

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF 115
           + DNL QAGSP+    L+SQVLLGLDEEYN +VAMIQGRV + W +MQ+ELL++
Sbjct: 124 NTDNLEQAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLY 177

[Close]

BLAST of Sgr018399 vs. NCBI nr
Match: XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida])

HSP 1 Score: 144.1 bits (362), Expect = 7.7e-31
Identity = 72/114 (63.16%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           MTP++A QVMG E AK+LW +I +LFGVQS  EEDYL  VFQ T K +LKM +YL  MK 
Sbjct: 64  MTPEVAIQVMGCECAKDLWTSIPQLFGVQSRVEEDYLRHVFQTTRKGNLKMEEYLQTMKM 123

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF 115
           + DNL QAGSP+    L+SQVLLGLDEEYN +VAMIQGRV + W +MQ+ELL++
Sbjct: 124 NTDNLEQAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLY 177

[Close]

BLAST of Sgr018399 vs. ExPASy TrEMBL
Match: A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.5e-40
Identity = 88/110 (80.00%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           MTP++ATQVMG+ENA +LWAAI ELFGVQS AEEDYL QVFQQT K SLKM D+L VMKS
Sbjct: 53  MTPEVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKS 112

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAE 111
           HADNL QAGSPV    LISQVLLGLDEEYNPVVA IQG+ GI WPEMQAE
Sbjct: 113 HADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAE 162

[Close]

BLAST of Sgr018399 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 72/114 (63.16%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           M  D+A QVMGF  ++ LW A+ ELFGVQS AE DYL QVFQQT K SL+M +YL +MKS
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF 115
           HADNL+ AGS V+V  L+SQVL GLDEEYNP+V  +QG+V + W EM AELL +
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTY 231

[Close]

BLAST of Sgr018399 vs. ExPASy TrEMBL
Match: A0A5D3E3L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001590 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-29
Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           M PD+A Q+MGF  AK+LW AI  LFG++S AEE +L   FQ T + + KM DYL +MK 
Sbjct: 87  MVPDVALQLMGFNTAKDLWEAIQNLFGIKSRAEEYFLRHTFQTTREGNYKMEDYLRIMKI 146

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF 115
           +ADNL QAGSPV   +LISQVLLGLDE YNPV A+IQG+  I W +MQ+ELLIF
Sbjct: 147 NADNLGQAGSPVPHRYLISQVLLGLDEVYNPVTAVIQGKPDISWLDMQSELLIF 200

[Close]

BLAST of Sgr018399 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.7e-28
Identity = 68/114 (59.65%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           MTPD+A Q+MGF N ++LW A  + FGVQS AEED+L Q+ Q T K + KM +YLLVMK+
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVMKT 182

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF 115
           + DNL Q GSPV    LISQVLLGLDE YN V+ +IQG+  I W +MQ++LLIF
Sbjct: 183 NVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIF 236

[Close]

BLAST of Sgr018399 vs. ExPASy TrEMBL
Match: A0A0A0LXB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G496800 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.9e-27
Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 1   MTPDIATQVMGFENAKNLWAAILELFGVQSLAEEDYLCQVFQQTHKRSLKMADYLLVMKS 60
           +TP++  Q++GF NAK++W A  + FGV+S AEED+L Q FQ T K +  M DYL +MK+
Sbjct: 26  VTPEVVVQLIGFTNAKDMWEATHDFFGVRSRAEEDFLRQTFQTTRKGNSNMEDYLRIMKT 85

Query: 61  HADNLSQAGSPVAVCFLISQVLLGLDEEYNPVVAMIQGRVGIPWPEMQAELLIF 115
           +ADNL QA SP+    LISQVLLGLDE YNPV+ +IQG+  I W +MQ++LLIF
Sbjct: 86  NADNLGQAESPIPRRALISQVLLGLDEVYNPVIVVIQGKPEISWLDMQSKLLIF 139

The following BLAST results are available for this feature:

BLAST of Sgr018399 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148963.1	1.5e-39	80.00	uncharacterized protein LOC111017501 [Momordica charantia]	[more]
XP_038902487.1	2.0e-31	65.79	uncharacterized protein LOC120089143 [Benincasa hispida]	[more]
XP_022151683.1	2.6e-31	63.16	uncharacterized protein LOC111019598 [Momordica charantia]	[more]
XP_038905164.1	7.7e-31	63.16	uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]	[more]
XP_038905161.1	7.7e-31	63.16	uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]	[more]

BLAST of Sgr018399 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr018399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5J0	7.5e-40	80.00	uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DCW4	1.3e-31	63.16	uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5D3E3L7	1.2e-29	61.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SIT7	1.7e-28	59.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LXB7	1.9e-27	56.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G496800 PE=4 SV=1	[more]

BLAST of Sgr018399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 1..98 e-value: 5.1E-7 score: 29.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr018399.1	Sgr018399.1	mRNA