Sgr018062 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018062
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Reverse transcriptase domain-containing protein
Location	tig00153092: 754632 .. 754971 (-)
RNA-Seq Expression	Sgr018062
Synteny	Sgr018062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGTATGGAAGCTTTCAACCGTTGGATAGAGAATTGTAACCTCTCTGAAATTAATCTAGCTAATAGGCTTTTCACTTGTCCTAATAAGAGGGATTCTCCTATTCCCACTAAGATTGATAGATTCCTCGCCTCGAAGGAATGGTTGAAGTTCTTTTCCCATGGTAAAGCAACTAGGCTAGCTTCCTAGAATCACGTCGGACCATTTTCCGATCCTTTTGCAGTTGGGAAATTTTGTTTGGGACCTAGATCCTTTTAGATTTGAAAATGCTTGGCTTGACCATCCTGCATTTGAAGAGTCTCTCAATGCTTGGTGGAAAGAAGGTCCATCCTTCTAG

mRNA sequence

ATGAAGAGTATGGAAGCTTTCAACCGTTGGATAGAGAATTGTAACCTCTCTGAAATTAATCTAGCTAATAGGCTTTTCACTTGTCCTAATAAGAGGGATTCTCCTATTCCCACTAAGATTGATAGATTCCTCGCCTCGAAGGAATGGTTGAAGTTCTTTTCCCATGATCCTTTTAGATTTGAAAATGCTTGGCTTGACCATCCTGCATTTGAAGAGTCTCTCAATGCTTGGTGGAAAGAAGGTCCATCCTTCTAG

Coding sequence (CDS)

ATGAAGAGTATGGAAGCTTTCAACCGTTGGATAGAGAATTGTAACCTCTCTGAAATTAATCTAGCTAATAGGCTTTTCACTTGTCCTAATAAGAGGGATTCTCCTATTCCCACTAAGATTGATAGATTCCTCGCCTCGAAGGAATGGTTGAAGTTCTTTTCCCATGATCCTTTTAGATTTGAAAATGCTTGGCTTGACCATCCTGCATTTGAAGAGTCTCTCAATGCTTGGTGGAAAGAAGGTCCATCCTTCTAG

Protein sequence

MKSMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHDPFRFENAWLDHPAFEESLNAWWKEGPSF

Homology

[Close]

BLAST of Sgr018062 vs. NCBI nr
Match: CAN83533.1 (hypothetical protein VITISV_014043 [Vitis vinifera])

HSP 1 Score: 71.6 bits (174), Expect = 3.6e-09
Identity = 35/104 (33.65%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHD------ 62
           SM+ F+ +I +C L + +L N  FT  N ++SP+  ++DRFL S EW  FF         
Sbjct: 784 SMKDFDGFIRDCELFDPSLRNTSFTWSNMQESPVCKRLDRFLYSNEWEHFFPQSLQEVLP 843

Query: 63  ---------------------PFRFENAWLDHPAFEESLNAWWK 80
                                PFRF+N WL HP+F+E  ++WW+
Sbjct: 844 RWTSDHWPIVLDTNHFKWGPTPFRFKNMWLQHPSFKECFSSWWR 887

[Close]

BLAST of Sgr018062 vs. NCBI nr
Match: RVW32868.1 (DExH-box ATP-dependent RNA helicase DExH14 [Vitis vinifera])

HSP 1 Score: 71.6 bits (174), Expect = 3.6e-09
Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHD------ 62
           SM+ F+ +I +C L +  L N  FT  N ++ P+  ++DRFL S EW + F         
Sbjct: 589 SMKDFDDFIRDCELIDSPLRNAPFTWSNLQEHPVCKRLDRFLYSNEWEQLFPQSLQEVLL 648

Query: 63  ---------------------PFRFENAWLDHPAFEESLNAWWKE 81
                                PFRFEN WL HP+F+ES  +WW+E
Sbjct: 649 RWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKESFGSWWRE 693

[Close]

BLAST of Sgr018062 vs. NCBI nr
Match: RVX21408.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 71.2 bits (173), Expect = 4.7e-09
Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHD------ 62
           SM+ F+ +I +C L +  L N  FT  N ++SP+  ++DRFL S EW  FF         
Sbjct: 159 SMKDFDGFIRDCELLDPLLRNAPFTWSNMQESPVCKRLDRFLYSNEWEHFFPQSLQEVLP 218

Query: 63  ---------------------PFRFENAWLDHPAFEESLNAWWK 80
                                PFRFEN WL HP+F+E  ++WW+
Sbjct: 219 RWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHPSFKECFSSWWR 262

[Close]

BLAST of Sgr018062 vs. NCBI nr
Match: RVX21247.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 70.9 bits (172), Expect = 6.1e-09
Identity = 35/105 (33.33%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHD------ 62
           SM+ F+ +I +C L +  L +  FT  N +++P+  ++DRFL S EW + F         
Sbjct: 154 SMKDFDDFIRDCELIDSPLRSASFTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLP 213

Query: 63  ---------------------PFRFENAWLDHPAFEESLNAWWKE 81
                                PFRFEN WL HP+F+ES  +WW+E
Sbjct: 214 RWTSDHWSIVLETNPFKWGPTPFRFENMWLQHPSFKESFGSWWRE 258

[Close]

BLAST of Sgr018062 vs. NCBI nr
Match: RVW34589.1 (hypothetical protein CK203_079345 [Vitis vinifera])

HSP 1 Score: 70.9 bits (172), Expect = 6.1e-09
Identity = 34/104 (32.69%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKF---------- 62
           SM+ F+ +I +C L ++ L +  FT  N +++P+  ++DRFL S EW +F          
Sbjct: 164 SMKDFDDFIRDCELIDLPLRSASFTWSNMQENPVCKRLDRFLYSNEWEQFPQSIQGVLPR 223

Query: 63  ----------------FSHDPFRFENAWLDHPAFEESLNAWWKE 81
                           +   PFRFEN WL HP+F+E+   WW+E
Sbjct: 224 WTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWRE 267

[Close]

BLAST of Sgr018062 vs. ExPASy TrEMBL
Match: A0A438DBQ9 (DExH-box ATP-dependent RNA helicase DExH14 OS=Vitis vinifera OX=29760 GN=BRR2C_5 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09
Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHD------ 62
           SM+ F+ +I +C L +  L N  FT  N ++ P+  ++DRFL S EW + F         
Sbjct: 589 SMKDFDDFIRDCELIDSPLRNAPFTWSNLQEHPVCKRLDRFLYSNEWEQLFPQSLQEVLL 648

Query: 63  ---------------------PFRFENAWLDHPAFEESLNAWWKE 81
                                PFRFEN WL HP+F+ES  +WW+E
Sbjct: 649 RWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKESFGSWWRE 693

[Close]

BLAST of Sgr018062 vs. ExPASy TrEMBL
Match: A5BS62 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_014043 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09
Identity = 35/104 (33.65%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHD------ 62
           SM+ F+ +I +C L + +L N  FT  N ++SP+  ++DRFL S EW  FF         
Sbjct: 784 SMKDFDGFIRDCELFDPSLRNTSFTWSNMQESPVCKRLDRFLYSNEWEHFFPQSLQEVLP 843

Query: 63  ---------------------PFRFENAWLDHPAFEESLNAWWK 80
                                PFRF+N WL HP+F+E  ++WW+
Sbjct: 844 RWTSDHWPIVLDTNHFKWGPTPFRFKNMWLQHPSFKECFSSWWR 887

[Close]

BLAST of Sgr018062 vs. ExPASy TrEMBL
Match: A0A438KJM6 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_233 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-09
Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHD------ 62
           SM+ F+ +I +C L +  L N  FT  N ++SP+  ++DRFL S EW  FF         
Sbjct: 159 SMKDFDGFIRDCELLDPLLRNAPFTWSNMQESPVCKRLDRFLYSNEWEHFFPQSLQEVLP 218

Query: 63  ---------------------PFRFENAWLDHPAFEESLNAWWK 80
                                PFRFEN WL HP+F+E  ++WW+
Sbjct: 219 RWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHPSFKECFSSWWR 262

[Close]

BLAST of Sgr018062 vs. ExPASy TrEMBL
Match: A0A438DGN7 (Endo/exonuclease/phosphatase domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_079345 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.9e-09
Identity = 34/104 (32.69%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKF---------- 62
           SM+ F+ +I +C L ++ L +  FT  N +++P+  ++DRFL S EW +F          
Sbjct: 164 SMKDFDDFIRDCELIDLPLRSASFTWSNMQENPVCKRLDRFLYSNEWEQFPQSIQGVLPR 223

Query: 63  ----------------FSHDPFRFENAWLDHPAFEESLNAWWKE 81
                           +   PFRFEN WL HP+F+E+   WW+E
Sbjct: 224 WTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWRE 267

[Close]

BLAST of Sgr018062 vs. ExPASy TrEMBL
Match: A0A438KJ67 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_76 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.9e-09
Identity = 35/105 (33.33%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 3   SMEAFNRWIENCNLSEINLANRLFTCPNKRDSPIPTKIDRFLASKEWLKFFSHD------ 62
           SM+ F+ +I +C L +  L +  FT  N +++P+  ++DRFL S EW + F         
Sbjct: 154 SMKDFDDFIRDCELIDSPLRSASFTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLP 213

Query: 63  ---------------------PFRFENAWLDHPAFEESLNAWWKE 81
                                PFRFEN WL HP+F+ES  +WW+E
Sbjct: 214 RWTSDHWSIVLETNPFKWGPTPFRFENMWLQHPSFKESFGSWWRE 258

The following BLAST results are available for this feature:

BLAST of Sgr018062 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN83533.1	3.6e-09	33.65	hypothetical protein VITISV_014043 [Vitis vinifera]	[more]
RVW32868.1	3.6e-09	34.29	DExH-box ATP-dependent RNA helicase DExH14 [Vitis vinifera]	[more]
RVX21408.1	4.7e-09	34.62	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVX21247.1	6.1e-09	33.33	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW34589.1	6.1e-09	32.69	hypothetical protein CK203_079345 [Vitis vinifera]	[more]

BLAST of Sgr018062 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr018062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438DBQ9	1.7e-09	34.29	DExH-box ATP-dependent RNA helicase DExH14 OS=Vitis vinifera OX=29760 GN=BRR2C_5...	[more]
A5BS62	1.7e-09	33.65	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_014043 PE=4 SV=1	[more]
A0A438KJM6	2.3e-09	34.62	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438DGN7	2.9e-09	32.69	Endo/exonuclease/phosphatase domain-containing protein OS=Vitis vinifera OX=2976...	[more]
A0A438KJ67	2.9e-09	33.33	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]

BLAST of Sgr018062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 3..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr018062.1	Sgr018062.1	mRNA