Sgr017931 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017931
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Poly(A)-specific ribonuclease
Location	tig00153057: 627340 .. 627798 (+)
RNA-Seq Expression	Sgr017931
Synteny	Sgr017931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCGTTCGAGAAGTTTGGTCCCATAATCTCCGGCAAGAGCTCGCCGTTCTCGACGCCTGTCTTTCCGACTTTCCGGTGGTCGCCATTGACACCGAGTTCCCGGGGTTTATCAGATGCAGCCCGAGAGGGGCCCCGGAGGGACAGTTCTACGATGATCTTAAGTTCAATGTGAACCAGATGACGATTCTCCAGTTGGGCCTCACCGTTGCCGACGAGAGCGGGAACGTCGGCATGACATGGCAGTTCAACTTCAGCGATTTCGATGAAACCACCGCCGTCCACAGCCGAACGTCGGTTGAGTTCTTGAAGAACACAGGCCTGGATTTTGAGAAGTTGAGGACAGAAGGAATAGCTTCGGGGAGTTCCGGCGGAAGTTTCTGCCGATCTGTTGCGGCGGTCGGATCGCCAAATGGGTCACCTTCCACGGCTTCTACGACGTCGCTTACTTGCTGA

mRNA sequence

ATGGGTCTCGTTCGAGAAGTTTGGTCCCATAATCTCCGGCAAGAGCTCGCCGTTCTCGACGCCTGTCTTTCCGACTTTCCGGTGGTCGCCATTGACACCGAGTTCCCGGGGTTTATCAGATGCAGCCCGAGAGGGGCCCCGGAGGGACAGTTCTACGATGATCTTAAGTTCAATGTGAACCAGATGACGATTCTCCAGTTGGGCCTCACCGTTGCCGACGAGAGCGGGAACGTCGGCATGACATGGCAGTTCAACTTCAGCGATTTCGATGAAACCACCGCCGTCCACAGCCGAACGTCGGTTGAGTTCTTGAAGAACACAGGCCTGGATTTTGAGAAGTTGAGGACAGAAGGAATAGCTTCGGGGAGTTCCGGCGGAAGTTTCTGCCGATCTGTTGCGGCGGTCGGATCGCCAAATGGGTCACCTTCCACGGCTTCTACGACGTCGCTTACTTGCTGA

Coding sequence (CDS)

ATGGGTCTCGTTCGAGAAGTTTGGTCCCATAATCTCCGGCAAGAGCTCGCCGTTCTCGACGCCTGTCTTTCCGACTTTCCGGTGGTCGCCATTGACACCGAGTTCCCGGGGTTTATCAGATGCAGCCCGAGAGGGGCCCCGGAGGGACAGTTCTACGATGATCTTAAGTTCAATGTGAACCAGATGACGATTCTCCAGTTGGGCCTCACCGTTGCCGACGAGAGCGGGAACGTCGGCATGACATGGCAGTTCAACTTCAGCGATTTCGATGAAACCACCGCCGTCCACAGCCGAACGTCGGTTGAGTTCTTGAAGAACACAGGCCTGGATTTTGAGAAGTTGAGGACAGAAGGAATAGCTTCGGGGAGTTCCGGCGGAAGTTTCTGCCGATCTGTTGCGGCGGTCGGATCGCCAAATGGGTCACCTTCCACGGCTTCTACGACGTCGCTTACTTGCTGA

Protein sequence

MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFEKLRTEGIASGSSGGSFCRSVAAVGSPNGSPSTASTTSLTC

Homology

[Close]

BLAST of Sgr017931 vs. NCBI nr
Match: XP_038890962.1 (putative CCR4-associated factor 1 homolog 8 [Benincasa hispida])

HSP 1 Score: 174.9 bits (442), Expect = 5.4e-40
Identity = 80/121 (66.12%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 1   MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVN 60
           M LVR+VWSHNL +ELA+ +  LS FPV+ IDTEFPGFIR +PRGAP+   Y DLKFN+N
Sbjct: 1   MDLVRQVWSHNLYRELAIFNVYLSRFPVIVIDTEFPGFIRSTPRGAPKEHLYQDLKFNLN 60

Query: 61  QMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFEKLRTEGIA 120
            + ILQLGLT+ DE+GNVGMTW+F FSDFDE T + + TS++FLKN GLDF+K R EGI 
Sbjct: 61  HLKILQLGLTLVDENGNVGMTWEFTFSDFDEQTDLSNPTSIQFLKNKGLDFKKQREEGIR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Sgr017931 vs. NCBI nr
Match: XP_008454486.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >TYK17039.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 4.9e-33
Identity = 73/129 (56.59%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 1   MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVN 60
           M  VR+VW HN  QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE  FY DLKFN+N
Sbjct: 1   MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLN 60

Query: 61  QMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKN-TGLDFEKLRTEGI 120
            + ILQLGLT+ DE+ +VG++W F FSDFDE T   S TS+++LKN  G +F+K R +GI
Sbjct: 61  HLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGI 120

Query: 121 ASGSSGGSF 129
            S     +F
Sbjct: 121 PSAEFRRAF 129

[Close]

BLAST of Sgr017931 vs. NCBI nr
Match: TYK19448.1 (putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 8.4e-33
Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 1   MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVN 60
           M  +R+VW HNL QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE   Y DLKFN+N
Sbjct: 1   MSFIRQVWYHNLTQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNLN 60

Query: 61  QMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNT-GLDFEKLRTEGI 120
            + ILQ GLT+ DE+ +VG++W F FSDFDE T   S TS++FLKN  G +F+K + +GI
Sbjct: 61  HLKILQPGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQFLKNNRGFEFKKQKKDGI 120

Query: 121 AS 122
            S
Sbjct: 121 PS 122

[Close]

BLAST of Sgr017931 vs. NCBI nr
Match: XP_022975238.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 65/117 (55.56%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 5   REVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTI 64
           R+VWSHNL +E+ ++  CLS+FP+VA+DTEFPGF+RC+P+G  + +FY  L+FNVNQ++I
Sbjct: 17  RDVWSHNLLEEIELMKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNQLSI 76

Query: 65  LQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVE-FLKNTGLDFEKLRTEGIA 121
           LQLGLT+ DE+G +GMTW+FNF DFD+ + +    S++ FLKN G +F  LR+ GI+
Sbjct: 77  LQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGIS 133

[Close]

BLAST of Sgr017931 vs. NCBI nr
Match: XP_022146113.1 (putative CCR4-associated factor 1 homolog 8 [Momordica charantia])

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32
Identity = 67/116 (57.76%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 4   VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMT 63
           +REVWS N   ELA L+ CL+ +P++ IDTEFPGFIR +P GA E + YDD +FNVN+  
Sbjct: 16  IREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTK 75

Query: 64  ILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFEKLRTEGI 120
           ++QLGLT +DE GN+G TW+FNFSDFD     H+ +SV FLK  GLDF+KL+  GI
Sbjct: 76  LIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNGLDFDKLKEFGI 131

[Close]

BLAST of Sgr017931 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 52/131 (39.69%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 4   VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDL 63
           +REVW+HNL QE+A+++  + DFP VA+DTEFPG     +  +P   P        YD L
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 64  KFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSDFDETTAVHSRTSVEFLKNTG 120
           K NVN + ++QLGLT++DE GN+          WQFNF +F+  + + +  S+E L+ + 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSA 135

[Close]

BLAST of Sgr017931 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 54/129 (41.86%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 4   VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQ---FYDDLKFNVN 63
           +REVW+ NL  E+A++   + DFP VA+DTEFPG + C P G  +      Y+ LK NVN
Sbjct: 12  IREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIV-CRPVGTFKTNTEYHYETLKTNVN 71

Query: 64  QMTILQLGLTVADESGNVG--------MTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFE 122
            + ++QLGLT +DE GN+           WQFNF +FD  + +++  S+E L+ +G+DF 
Sbjct: 72  ILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFV 131

[Close]

BLAST of Sgr017931 vs. ExPASy Swiss-Prot
Match: O64773 (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-20
Identity = 48/114 (42.11%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 6   EVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTIL 65
           EVW  N + E+  +  CL     +AIDTEFPG ++ +P  A +   Y D+KFNV+   ++
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 66  QLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFEKLRTEGI 120
           QLGLT+  +   +  TW+ N SDF+E+ ++ +  S+ FLKN GLD +K+R EGI
Sbjct: 64  QLGLTLFGK--GITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGI 115

[Close]

BLAST of Sgr017931 vs. ExPASy Swiss-Prot
Match: Q9LXM2 (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-20
Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 3   LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFI-RCSPRGAPEGQFYDDLKFNVNQ 62
           + REVW+ NL  E  ++   + D+P +++DTEFPG I +   R       Y  LK NV+ 
Sbjct: 18  VTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDLYTLLKANVDA 77

Query: 63  MTILQLGLTVADESGNV---------GMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFE 122
           ++++Q+GLT++D +GN+         G  W+FNF DFD     H+  S+E L+  G+DFE
Sbjct: 78  LSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFE 137

[Close]

BLAST of Sgr017931 vs. ExPASy Swiss-Prot
Match: Q9SHJ0 (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.8e-20
Identity = 43/117 (36.75%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 3   LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQM 62
           L R VW  N+ +E+A +  CL  FP++A DTE+PG I  +   +   + Y  +K NV   
Sbjct: 8   LARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENT 67

Query: 63  TILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFEKLRTEGI 120
            ++Q G T+ +  G +G  W+ NFS+F + +   +  S+EFL+  GLD +K+R EG+
Sbjct: 68  KLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGV 124

[Close]

BLAST of Sgr017931 vs. ExPASy TrEMBL
Match: A0A5D3D333 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001870 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.4e-33
Identity = 73/129 (56.59%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 1   MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVN 60
           M  VR+VW HN  QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE  FY DLKFN+N
Sbjct: 1   MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLN 60

Query: 61  QMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKN-TGLDFEKLRTEGI 120
            + ILQLGLT+ DE+ +VG++W F FSDFDE T   S TS+++LKN  G +F+K R +GI
Sbjct: 61  HLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGI 120

Query: 121 ASGSSGGSF 129
            S     +F
Sbjct: 121 PSAEFRRAF 129

[Close]

BLAST of Sgr017931 vs. ExPASy TrEMBL
Match: A0A1S3BY95 (Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494884 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.4e-33
Identity = 73/129 (56.59%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 1   MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVN 60
           M  VR+VW HN  QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE  FY DLKFN+N
Sbjct: 1   MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLN 60

Query: 61  QMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKN-TGLDFEKLRTEGI 120
            + ILQLGLT+ DE+ +VG++W F FSDFDE T   S TS+++LKN  G +F+K R +GI
Sbjct: 61  HLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGI 120

Query: 121 ASGSSGGSF 129
            S     +F
Sbjct: 121 PSAEFRRAF 129

[Close]

BLAST of Sgr017931 vs. ExPASy TrEMBL
Match: A0A5D3D792 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001010 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.1e-33
Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 1   MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVN 60
           M  +R+VW HNL QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE   Y DLKFN+N
Sbjct: 1   MSFIRQVWYHNLTQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNLN 60

Query: 61  QMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNT-GLDFEKLRTEGI 120
            + ILQ GLT+ DE+ +VG++W F FSDFDE T   S TS++FLKN  G +F+K + +GI
Sbjct: 61  HLKILQPGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQFLKNNRGFEFKKQKKDGI 120

Query: 121 AS 122
            S
Sbjct: 121 PS 122

[Close]

BLAST of Sgr017931 vs. ExPASy TrEMBL
Match: A0A6J1IIN1 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111474351 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.3e-33
Identity = 65/117 (55.56%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 5   REVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTI 64
           R+VWSHNL +E+ ++  CLS+FP+VA+DTEFPGF+RC+P+G  + +FY  L+FNVNQ++I
Sbjct: 17  RDVWSHNLLEEIELMKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNQLSI 76

Query: 65  LQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVE-FLKNTGLDFEKLRTEGIA 121
           LQLGLT+ DE+G +GMTW+FNF DFD+ + +    S++ FLKN G +F  LR+ GI+
Sbjct: 77  LQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGIS 133

[Close]

BLAST of Sgr017931 vs. ExPASy TrEMBL
Match: A0A6J1CXP9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111015407 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 67/116 (57.76%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 4   VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMT 63
           +REVWS N   ELA L+ CL+ +P++ IDTEFPGFIR +P GA E + YDD +FNVN+  
Sbjct: 16  IREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTK 75

Query: 64  ILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFEKLRTEGI 120
           ++QLGLT +DE GN+G TW+FNFSDFD     H+ +SV FLK  GLDF+KL+  GI
Sbjct: 76  LIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNGLDFDKLKEFGI 131

[Close]

BLAST of Sgr017931 vs. TAIR 10
Match: AT1G15920.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 8.4e-23
Identity = 52/131 (39.69%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 4   VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDL 63
           +REVW+HNL QE+A+++  + DFP VA+DTEFPG     +  +P   P        YD L
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 64  KFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSDFDETTAVHSRTSVEFLKNTG 120
           K NVN + ++QLGLT++DE GN+          WQFNF +F+  + + +  S+E L+ + 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSA 135

[Close]

BLAST of Sgr017931 vs. TAIR 10
Match: AT1G15920.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 8.4e-23
Identity = 52/131 (39.69%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 4   VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDL 63
           +REVW+HNL QE+A+++  + DFP VA+DTEFPG     +  +P   P        YD L
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 64  KFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSDFDETTAVHSRTSVEFLKNTG 120
           K NVN + ++QLGLT++DE GN+          WQFNF +F+  + + +  S+E L+ + 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSA 135

[Close]

BLAST of Sgr017931 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 8.4e-23
Identity = 54/129 (41.86%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 4   VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQ---FYDDLKFNVN 63
           +REVW+ NL  E+A++   + DFP VA+DTEFPG + C P G  +      Y+ LK NVN
Sbjct: 12  IREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIV-CRPVGTFKTNTEYHYETLKTNVN 71

Query: 64  QMTILQLGLTVADESGNVG--------MTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFE 122
            + ++QLGLT +DE GN+           WQFNF +FD  + +++  S+E L+ +G+DF 
Sbjct: 72  ILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFV 131

[Close]

BLAST of Sgr017931 vs. TAIR 10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 48/114 (42.11%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 6   EVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTIL 65
           EVW  N + E+  +  CL     +AIDTEFPG ++ +P  A +   Y D+KFNV+   ++
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 66  QLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFEKLRTEGI 120
           QLGLT+  +   +  TW+ N SDF+E+ ++ +  S+ FLKN GLD +K+R EGI
Sbjct: 64  QLGLTLFGK--GITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGI 115

[Close]

BLAST of Sgr017931 vs. TAIR 10
Match: AT3G44260.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 3   LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFI-RCSPRGAPEGQFYDDLKFNVNQ 62
           + REVW+ NL  E  ++   + D+P +++DTEFPG I +   R       Y  LK NV+ 
Sbjct: 18  VTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDLYTLLKANVDA 77

Query: 63  MTILQLGLTVADESGNV---------GMTWQFNFSDFDETTAVHSRTSVEFLKNTGLDFE 122
           ++++Q+GLT++D +GN+         G  W+FNF DFD     H+  S+E L+  G+DFE
Sbjct: 78  LSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFE 137

The following BLAST results are available for this feature:

BLAST of Sgr017931 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890962.1	5.4e-40	66.12	putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]	[more]
XP_008454486.1	4.9e-33	56.59	PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo] >TYK17039....	[more]
TYK19448.1	8.4e-33	57.38	putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]	[more]
XP_022975238.1	1.1e-32	55.56	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022146113.1	2.4e-32	57.76	putative CCR4-associated factor 1 homolog 8 [Momordica charantia]	[more]

BLAST of Sgr017931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9P2	1.2e-21	39.69	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SKZ2	1.2e-21	41.86	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
O64773	2.9e-20	42.11	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LXM2	2.9e-20	36.43	Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SHJ0	3.8e-20	36.75	Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Sgr017931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D333	2.4e-33	56.59	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BY95	2.4e-33	56.59	Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494884 PE=3 SV=1	[more]
A0A5D3D792	4.1e-33	57.38	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1IIN1	5.3e-33	55.56	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111474351 PE=3 S...	[more]
A0A6J1CXP9	1.2e-32	57.76	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111015407 PE=...	[more]

BLAST of Sgr017931 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15920.2	8.4e-23	39.69	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G15920.1	8.4e-23	39.69	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G32070.1	8.4e-23	41.86	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G61470.1	2.1e-21	42.11	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44260.1	2.1e-21	36.43	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 7..119 e-value: 2.5E-11 score: 43.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..147 e-value: 1.1E-35 score: 124.9
None	No IPR available	PANTHER	PTHR10797:SF57	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 3-RELATED	coord: 3..121
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 3..121
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017931.1	Sgr017931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity