Sgr017698 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017698
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	coiled-coil domain-containing protein 12-like
Location	tig00153054: 882287 .. 885438 (+)
RNA-Seq Expression	Sgr017698
Synteny	Sgr017698

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTCAGAGCTGCTCAGGAATTGTTAAACGCTCCAGATGAGAAGACTTCTGGTGCCGACGATAAAGAGAATGGCGAAGAAACGTGAGTCTATCATCTTTTTCTTCCACTAAAAACAATCTGCTGTAGAAGTTATTTTTTCGACAAGTTTTTTGTTTCGTTTTCTCGAGTAGGTGGCATACCAATAATATTTGGATTGATCAAACTTTGAAAGGTTGATATGGAGTTAATGAAAATAGTATATATAGACGATCCTAGAAGATGAGTTAGACTCTTGAGAATAATGAGTGAACTATACCTCTCATATTTTCTTCAGATCTGTAGTATTCTTGCTTCTAGAAGCTTCTATAATATGTTTGTTTTCAATTTGATTTCTCTGAGAGTAATATCCTTGACTTTTGATTGCAAGTTGTTTTGAATTGTTATTCTCCTATTCATAGTGTGGATCGCTTCACTTTTAAGCACATAGGTTCAATTTGACCTCTCGGACTCTGTAATATCCTCTCTCAACTCTATAATCCCTAAGTTGTGCGTGCTTTTAAAGATCTAGCCTACGATCTTCTCTCCAAATGTAGGATCGTGAACTATAATTCTTCTCACTTTTGATCAATGGATTGGAAGCTTGAAGAATATAGAAACATGAATAGATCAAAAAGAAATCATTTGATAAAGTTCATGCACAAATCACAATGATCCATTAAGGTTACATCATCCTCTTGAAAAAGTAATTAGTTACTCATAATTCCTAGAAGCTGAGACTTCACAAAACAAATATTCCATTGAAAGAAAATTATGAAGTAGATGAAGAGGAAAAACGAATAGATTTCATGATACGCTCCTGTCCTGAATGTCTGTCTTCTACTCCTAAGAATGGTGATGTCCTTCTTCCTCTGCCTTTAGCGACTCTTTTTATCTTTGTGTCCATTTCCCTTCCATTTTTTACTCTCTGTGTGTGCATACTGGCACAGTGAGCCAAGCTCTCTCGAATCTTGCTTGGAACGTGGCACAGACAACTATTGCATGCTGGCCAGCGAGCCAAGCTTTCTACAACTTGGCTCGTGACATGTTACAAACGACTGCCATAGCAGCGCATCTGCATGGTTGTGATTGTGACAGCACAAACAAATTTTTTCTTCTTTTCCTTTGTCAGCTTCTTCTTACTATTTGCAAAATAGAATCATAAAAGTCAACAACATGTCCAAATAGAGCACAAGACTAGCCAGATATTTGATAAAAGAGAGCTGTAAAATGCATGTTAACAGAATCCATATGGAGCATTTTCATAAATATCCTCCCCTGTTTCTTTTTTTCATTCTCTTTCCTCTTTTTCCTTTTCCTTTCTAATTCTTAAGAATGTTTGTGCTTGTAAACGTTCGGGAGGACGCTGACATACAACTTAACTGCTTATTTATCGTTTGGGATATGTTTTCATTTCATGGTCACCTTCAAAAGTGTTCCAATATATTTTGTCTCTTGCAAGGGGAAAAAAGTGTTCCGATATAAATGGTGTTCTTTTTTCTATTTGAATATATGTTAAGTTTGATGTTATTGCCAACTTATTTAAAAACGTACACAGTTACCATCCATGTTATGTGGCTCTTCCCTCTTTTGATGAGTGCAAAACCCAGGCGAGCTTTTTTTTATTATTGAATTTGTATGTATCTCATTTGCCTTTTCAGTTCTTGATTCACTAATAAATTATCCTTTTACAGTAATCTTAGCATGAAATTTCGGAACTATGTTCCTCATGATAAGGAACTTCAGGAGGGTAAGCTTGCCCCACCTATATTGCCAAAGTTTGAGGACCCTGTTGCTACCGAGCCTCCACAATTAAAAGAGGTAATTTTGTCAGTTTTTGCGCTTATATGTTTTTAAACTGGCCTATGCTCGTAATTTGTGAATTTTTTTTCTATTAATTATACTCCACTGGCAAAATTATAGGACCCGTTTGTAAATATTGCTCCAAAGAAACCAAACTGGGACCTCAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGGTAAGTAGTAGTATTGAATTAGAGGTCTATATGAACTTGTTGATAAGTCATTATTCTTTTCTGGTTCTTTTACTTCTTGCTTCGTTTGGTAGTGTAACATAGTATTTAACGAATTGGAATTTATTTGCTTTCATTGTTTGAGAAGATATCTATCTAGTCAATTAGCATATACTGATATACATAACATAATATATAATTTTTGTTTGCTGATCCCGTTTTGGGGTTCGGAATTCAATAAAAAAAAAATTTCATGAATATAACTTATGCTACACTTGAAGCAATTAACAAATTTTCATGCTCCACAGCATTTATGAACAATTAAGAGATTTTGATTATCATCTTGTAAGAAGTCGTGTTCAAGTCAGTATGCGTACTGAAATGTCAGTTGCAACCTTTATCTCCAACCTTTTTGAACCTACTTAAGTCATTGCATATCCAGATAAAAGAACCATTGTATTAAATAAAATATATTGTTGGAGTTGATTTGATTCTATTAGGATAATTGAGAGTATCTGGTCATCAGTTGTGGATCTTATGATTTAACACTCGTCGATGTTGAAGTTAACCTGCTGGGCAATTAAAGTTTGGGGGATTTCTAGGTATTAAGGAAAATTCTGGAGCTTGGAGGAGAATGGGACCAACAGATAAAACCATAACCTTCTAGTGATGAACTTTATATACTGATAAGCTTGTGAAGGCATTGAAAGTTATAGAAATGATCCTGACATCTTTTCTTGAATCGCAGTAGGTGAGGTGGAAGCCAAAACTCAAAAATTAAATAAACCAACAAAACTAGCCGAACCGAGTTGGTTTGGTCAGTTTGAACATAATAGTCAGTTGGTTCAACTTTTTAAAATATAAAATCGAAAACTAGTAGGCCGATTTTGTTTGGATAAAAAGTTGTCACTTTCAGTCAGGTTATTGGATTGTCAGTTTGATAATTGCGTCTGTATCGTTTATTTTGTTTTATAGAGGAACAGGAAAAGCAAAAGCAGTCAGATGAAGGAGACGATGAGCAGAATGGTACAGAGGGATAG

mRNA sequence

ATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTCAGAGCTGCTCAGGAATTGTTAAACGCTCCAGATGAGAAGACTTCTGGTGCCGACGATAAAGAGAATGGCGAAGAAACTAATCTTAGCATGAAATTTCGGAACTATGTTCCTCATGATAAGGAACTTCAGGAGGGTAAGCTTGCCCCACCTATATTGCCAAAGTTTGAGGACCCTGTTGCTACCGAGCCTCCACAATTAAAAGAGGACCCGTTTGTAAATATTGCTCCAAAGAAACCAAACTGGGACCTCAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGATGAAGGAGACGATGAGCAGAATGGTACAGAGGGATAG

Coding sequence (CDS)

ATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTCAGAGCTGCTCAGGAATTGTTAAACGCTCCAGATGAGAAGACTTCTGGTGCCGACGATAAAGAGAATGGCGAAGAAACTAATCTTAGCATGAAATTTCGGAACTATGTTCCTCATGATAAGGAACTTCAGGAGGGTAAGCTTGCCCCACCTATATTGCCAAAGTTTGAGGACCCTGTTGCTACCGAGCCTCCACAATTAAAAGAGGACCCGTTTGTAAATATTGCTCCAAAGAAACCAAACTGGGACCTCAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGATGAAGGAGACGATGAGCAGAATGGTACAGAGGGATAG

Protein sequence

MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENGEETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

Homology

[Close]

BLAST of Sgr017698 vs. NCBI nr
Match: XP_023542240.1 (coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542241.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542242.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542243.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.9 bits (668), Expect = 3.3e-66
Identity = 141/154 (91.56%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSG +DKENG     EETNL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDKENGAAADTEETNLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG 150
           LERRTQKALYKLMEEQEKQKQS EGDD+QN TEG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNDTEG 154

[Close]

BLAST of Sgr017698 vs. NCBI nr
Match: XP_022994277.1 (coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994278.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima] >XP_022994279.1 coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994280.1 coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994281.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima] >XP_022994282.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 261.5 bits (667), Expect = 4.3e-66
Identity = 140/154 (90.91%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDSVEQVAAAR+ERLRALR AQELLNAPDEKTSG +D+ENG     EETNL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRTAQELLNAPDEKTSGGEDQENGTAADTEETNLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG 150
           LERRTQKALYKLMEEQEKQKQS EGDD+QNGTEG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGTEG 154

[Close]

BLAST of Sgr017698 vs. NCBI nr
Match: XP_022155130.1 (coiled-coil domain-containing protein 12 isoform X1 [Momordica charantia])

HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDSVEQVAAARKERLRALRAAQELLN PDEKTSG +DK+NG     EETNLSMKFR
Sbjct: 1   MATEEDSVEQVAAARKERLRALRAAQELLNTPDEKTSGGEDKDNGVIEDTEETNLSMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPVA EPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVANEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG 150
           LERRTQKALYKLM+EQEKQK+S EGDD QNGTEG
Sbjct: 121 LERRTQKALYKLMKEQEKQKESAEGDDVQNGTEG 154

[Close]

BLAST of Sgr017698 vs. NCBI nr
Match: XP_022955111.1 (coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955112.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955113.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955114.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 258.1 bits (658), Expect = 4.8e-65
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSG +D+ENG     EE NL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADTEEINLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG 150
           LERRTQKALYKLMEEQEKQKQS EGDD+QN TEG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNDTEG 154

[Close]

BLAST of Sgr017698 vs. NCBI nr
Match: KAG6572999.1 (Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.1 bits (658), Expect = 4.8e-65
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSG +D+ENG     EE NL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADTEEINLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG 150
           LERRTQKALYKLMEEQEKQKQS EGDD+QN TEG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNDTEG 154

[Close]

BLAST of Sgr017698 vs. ExPASy Swiss-Prot
Match: Q8R344 (Coiled-coil domain-containing protein 12 OS=Mus musculus OX=10090 GN=Ccdc12 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 7.5e-13
Identity = 52/137 (37.96%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 8   VEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENGEET--NLSMKFRNYVPHDKELQ 67
           +E+ A  RKERL+ALR      +  D +      +E GEE   +  ++ RNYVP D++L+
Sbjct: 11  LEEEALRRKERLKALREKTGRKDREDGEPQTKQLREEGEEVGKHRGLRLRNYVPEDEDLK 70

Query: 68  EGKL--APPIL----PKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDKLERR 127
             ++  A P+      K +   A   P ++E    N+AP+KP+WDL+RDV KKL+KLE+R
Sbjct: 71  RRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRDVAKKLEKLEKR 130

Query: 128 TQKALYKLMEEQEKQKQ 137
           TQ+A+ +L+ E+ K ++
Sbjct: 131 TQRAIAELIRERLKGQE 147

[Close]

BLAST of Sgr017698 vs. ExPASy Swiss-Prot
Match: Q8WUD4 (Coiled-coil domain-containing protein 12 OS=Homo sapiens OX=9606 GN=CCDC12 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-11
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 8   VEQVAAARKERLRALRAAQELLNAPD--EKTSGADDKENGEETNLSMKFRNYVPHDKELQ 67
           +E+ A  RKERL+ALR      +  D   KT    ++E   E +  ++ RNYVP D++L+
Sbjct: 11  LEEEALRRKERLKALREKTGRKDKEDGEPKTKHLREEEEEGEKHRELRLRNYVPEDEDLK 70

Query: 68  EGKL--APPIL----PKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDKLERR 127
           + ++  A P+      K +   A   P ++E    N+AP+KP+WDL+RDV KKL+KL++R
Sbjct: 71  KRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRDVAKKLEKLKKR 130

Query: 128 TQKALYKLMEEQEKQKQSDEGDDEQNGTE 149
           TQ+A+ +L+ E+ K ++          TE
Sbjct: 131 TQRAIAELIRERLKGQEDSLASAVDAATE 159

[Close]

BLAST of Sgr017698 vs. ExPASy TrEMBL
Match: A0A6J1JYP1 (coiled-coil domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490058 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 140/154 (90.91%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDSVEQVAAAR+ERLRALR AQELLNAPDEKTSG +D+ENG     EETNL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRTAQELLNAPDEKTSGGEDQENGTAADTEETNLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG 150
           LERRTQKALYKLMEEQEKQKQS EGDD+QNGTEG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGTEG 154

[Close]

BLAST of Sgr017698 vs. ExPASy TrEMBL
Match: A0A6J1DLK0 (coiled-coil domain-containing protein 12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022269 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDSVEQVAAARKERLRALRAAQELLN PDEKTSG +DK+NG     EETNLSMKFR
Sbjct: 1   MATEEDSVEQVAAARKERLRALRAAQELLNTPDEKTSGGEDKDNGVIEDTEETNLSMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPVA EPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVANEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG 150
           LERRTQKALYKLM+EQEKQK+S EGDD QNGTEG
Sbjct: 121 LERRTQKALYKLMKEQEKQKESAEGDDVQNGTEG 154

[Close]

BLAST of Sgr017698 vs. ExPASy TrEMBL
Match: A0A6J1GST8 (coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111457177 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-65
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSG +D+ENG     EE NL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADTEEINLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG 150
           LERRTQKALYKLMEEQEKQKQS EGDD+QN TEG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNDTEG 154

[Close]

BLAST of Sgr017698 vs. ExPASy TrEMBL
Match: A0A6J1E719 (coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111431306 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.8e-63
Identity = 138/156 (88.46%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG--------EETNLSM 60
           MATE+DSVEQVAAARKERLRALRAAQELLNA DEK SG +DKENG        EETNLSM
Sbjct: 1   MATEDDSVEQVAAARKERLRALRAAQELLNASDEKNSGGEDKENGATEDPEDPEETNLSM 60

Query: 61  KFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK 120
           KFRNYVPHDKELQEGKL PP LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK
Sbjct: 61  KFRNYVPHDKELQEGKLVPPELPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK 120

Query: 121 LDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTE 149
           LDKLERRTQKALYKLMEEQEKQKQS EGDD+QN TE
Sbjct: 121 LDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNITE 156

[Close]

BLAST of Sgr017698 vs. ExPASy TrEMBL
Match: A0A1S3ATB1 (coiled-coil domain-containing protein 12 OS=Cucumis melo OX=3656 GN=LOC103482658 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61
Identity = 132/153 (86.27%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFR 60
           MATEEDS EQVAAARKERL+ALRAAQELLNA DEK S  +DKENG     +ETNL+MKFR
Sbjct: 1   MATEEDSFEQVAAARKERLKALRAAQELLNASDEKNSVGEDKENGATADTDETNLNMKFR 60

Query: 61  NYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPP+LPKFEDPV TEPPQ KEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQQKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSDEGDDEQNGTE 149
           LERRTQKALYKLMEEQEKQKQ+ EGDD+QNG E
Sbjct: 121 LERRTQKALYKLMEEQEKQKQAAEGDDDQNGAE 153

[Close]

BLAST of Sgr017698 vs. TAIR 10
Match: AT3G05070.1 (CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 170.6 bits (431), Expect = 9.3e-43
Identity = 99/143 (69.23%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENGEETNLSMKFRNYVPH 60
           MA+E++S+EQ AAARKE L+ALRAAQEL    + K  G D  E  EE   +MKFRNYVP 
Sbjct: 1   MASEDESIEQKAAARKEALKALRAAQEL---SETKEDGED--EAVEEDGPAMKFRNYVPQ 60

Query: 61  DKELQEGKLAPPILPKFEDPVATEPP--QLKEDPFVNIAPKKPNWDLRRDVQKKLDKLER 120
            KELQ+GKLAPP LPKFEDP+   PP  + KEDPFVNIAPKKPNWDLRRDVQKKLDKLER
Sbjct: 61  AKELQDGKLAPPELPKFEDPIVALPPAVEKKEDPFVNIAPKKPNWDLRRDVQKKLDKLER 120

Query: 121 RTQKALYKLMEEQEKQKQSDEGD 142
           RTQKA++KLMEEQEK+++  E D
Sbjct: 121 RTQKAMHKLMEEQEKEREMAEAD 138

The following BLAST results are available for this feature:

BLAST of Sgr017698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542240.1	3.3e-66	91.56	coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_0...	[more]
XP_022994277.1	4.3e-66	90.91	coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_...	[more]
XP_022155130.1	2.8e-65	90.26	coiled-coil domain-containing protein 12 isoform X1 [Momordica charantia]	[more]
XP_022955111.1	4.8e-65	90.26	coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955112...	[more]
KAG6572999.1	4.8e-65	90.26	Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Sgr017698 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8R344	7.5e-13	37.96	Coiled-coil domain-containing protein 12 OS=Mus musculus OX=10090 GN=Ccdc12 PE=1...	[more]
Q8WUD4	4.1e-11	35.57	Coiled-coil domain-containing protein 12 OS=Homo sapiens OX=9606 GN=CCDC12 PE=1 ...	[more]

BLAST of Sgr017698 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JYP1	2.1e-66	90.91	coiled-coil domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1DLK0	1.4e-65	90.26	coiled-coil domain-containing protein 12 isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1GST8	2.3e-65	90.26	coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1E719	4.8e-63	88.46	coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3ATB1	2.6e-61	86.27	coiled-coil domain-containing protein 12 OS=Cucumis melo OX=3656 GN=LOC103482658...	[more]

BLAST of Sgr017698 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05070.1	9.3e-43	69.23	CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Ha...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..149
IPR013169	mRNA splicing factor Cwf18-like	PFAM	PF08315	cwf18	coord: 8..130 e-value: 6.0E-35 score: 120.8
IPR013169	mRNA splicing factor Cwf18-like	PANTHER	PTHR31551	PRE-MRNA-SPLICING FACTOR CWF18	coord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017698.1	Sgr017698.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0005684	U2-type spliceosomal complex