Sgr017579 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr017579
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionRNA-binding family protein
Locationtig00153051: 289773 .. 300751 (-)
RNA-Seq ExpressionSgr017579
SyntenySgr017579
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGAGGAGGTGCCATATTCCGGGGACTTGTCGCCAATTCGGAGAAGAAGACTCTTCCAGCTGCTCATTCTCCCTAGAATAGGACTTTTTCTAGACGGAAAATGGAGGAGATGGGGAAGTGGGTTCGGATTAACACGCGGGCCTGTAGAAGCAGGGGAGTTTTCGGAGCAGGAAGAGCCTAGCAGTGAGGAGTGGGGGTTTAGAGAGAGAAGTGGAAGAGAGAATTTTAGCTTGGAGAAAAGAACGAGCTGGTAAAGGGAGAGGGATACGGGGGGATTAGAAGGGTTTTGGGTTGAAAATTGAAATTACAGACTTCTCCCGAACCCTAGAATAATAAACAAATGGACCATGGTAGATACAACTAGTTTATTTTTTTTTGTTTTTTTGATCGAGCCGAGCTCAATTTATCGAGACATCAGTAACATTTTTAAAGTCCCAAGTTTTACCCCACTTCGTTTGCAATACTCAAATAAAAAAAATAAAATATATTATTAATTTTTGCCCTTTGACAATACAGGTACGATGACTTAGTTTTACCTTCTTTTTTTGGCTTGTTACTAGTGGGTTGTTTAGAGTTATAACTTCAACTACGGTAAGTAAACATGAGAGTTGTGCTCGTTATGGAACTTAATCCAATGCCGTATGACATGAGTTGATGATAACCATGCACTACATTTGCTTGCATTCCCAAAAGTACCTATCTCTTTCAAGAGGATTTACGGCATGTTAGCCTCAGTAAGATTCTTCACTTGTGCATTGAATTAAACCACGTGTTCCATTACTTGCGTAGGCCTTCGTGGATTATTTTGAGTTTCATTTTTGCAACGTACTCTCCGTATGGATATTTATTTAACATGTTAGCTACAACATACACTAGTCGATACGCACATGTATTCATTGTTTACTATCGAGACTCTTAAAAATGTCTAAATGATTTAGTATCAATTTTGATCTTTATTTTTTTAATGTATGACATAATACACTAAAAATATATATATTTTTCATACAACGTTTCAAATTTAGGTTAAAACTAATCTTACTTTAGCTACATTTTTATATATGGTATGGTTTAATTGGTAAATAAATATATTATTTACTTTACATTAAAATTAATATAACTAAATATGAAATGTGTGATAAATATTAATTGAATGTACAATTCCATTGACCATCCGACTTACAAATTATATAAACACTTTAGAAGTTTAATTGCGGTGTCTTTGTCAATGACTCTAGCGATCAAGTTGTCGATAACTAAAATGAAAACAAAAGTCATAAGTTGGCAACAAATGGAAAGATTTATCTGAACGTAATATTTATATCCTATGAAAAATGTGTAGTTCAAATGATTGTTCCCTTTATTTTTTTTTTATTTTAAATATCACAAATTGAAGGTGGGAGGATTCGAACTATCACTAGACCAACTCATGATGGTTAGAGTTTATATTTTCACCGGCTCAAAATAAGACTTAGTTTCTTATTAGACGATAATCAAGTTGTTGGTTTTTTTTTCTGAGTTTAACAATTACGTAGTGAAGATCGAACCATTGACTTTTGCAATGGTAATAGATGCCTTATTCACTGAGCTATACTTGAATGGGTAACAAATTGGTAGTTAAAACTTATAATTTAATGATACTTTAAAAAAATAACATGCAATAAAAGGTTATGGTTGCAATTTTTTATTTTTATTTTTTACAATTTCAATTGCTATCAGAATAAAAATGTATACAAATATATAATATAGTCATTAATTTGTCTGAAAATTTTCAACCCCAACCTCTTAAAAGTTTTTTAATTTCATCACTTATATATTTAATATATTTTAATCAAATTATTAATGCCAACTAAATGTAAAAGAGAATGATGTGTGGATTTAAAAAAATGTATAGTATGAGATTGTTAGTTATTAAGGGTTAGGTTAGATGAAGTGGGTAAATTTTTTATTTTATGATAGAGCGCGAGCATGTTTTTCATTAAAATAAAAACATATGATATTTGTACTTAATTAATAAAATACATCTTGACGTCATATCATCATCTTGTTAATGAATTTAAAAGTTGTATGTGATTGTAAAAAAATCAATATATGACAACTTGAGCATAGTATAACTGGTTTAAAGGTATTAGTAATGTTATTTCTTACAAAATCCACACTTTACAATTATAAAAAATAGTAGTTTATTTGAGTATAACTCAACTAGACAATATATTAGTAGCTTCTTTCAAAGGTCGTAGTCTAATCTCCACAATTTTTTTTTTTTTATTTTGGTCAACATTTCCATATGTAAGGTTCGACATCAATACGGAATTAAATCCATATTTCTACTACACCGTAAAAATATCGACTAAATATAAAAAATATTTACAAAATATCACTATTACGAACAAAAATACTAATAAGAATGTATAAATTATTTTTAACATGTGAAATACTTATTTATTAATTTAAGTATATTTTATAAATTTTTTAAGTTAAATTACAAATTTGATCCTTACGGCTCAGACATAGTTTCAAATTGGTTTTTATGGTTTTAAAATTTTGAATTTAATCCCAATGATTTGAACTTAGTTTCGATCTAGTCCATATGATTTTAAAAATTTCAATTTAGTCTCTATGCTTTGGACTTAGTTTAAATTTAGTGTTTATGATTTTAAAAGTTTCAATTTAGTCCTTATAGTTTAGTCAAACCTCACAAATCGTCCCTGCTGTTACATACTGACACATTTTTTTACGTGGCAATGACGTTTTTTATTCAGCCAACTGTATTAGTTGACTATATTAGGATTCAATACTAAAAAAAATAAAAAGAAATAGGTAGGTTTTTGGGTGGGTAAAAGACAGTTTAAGGATAATTTGTGAGGTGTAATCAAACTATGGAGACTAAATCAAAACTTTTAAAACTATTAAGGATCAAATTCAAACTATTCCCAAACCGTAACGACTAAATTTACAACTTAACCAATTTTGTAATATTACGATTTTCTAAAAAATATCTATTAACATCATTACTTTATCCATATTTTAATGGATATTTCTATAAAATCGAGTGTTCAACATCTAGATCTCTTAAAAGAAAAATAAAATTTCAAATAACGGGGACGTGAAAAGCACGTCATACGATCGTTTCTTTTTATGGAGAGAAAGGCACGTGATTAAATTCAACGAAAAAAAAAATAAAAAGAAAAATTCCAAAAAAAAATGGGTTAGCGGGCAAACCAGAAACCCTCGTTTCGATCCCCAAAAACCCCACACCATCCCATTTCCTTCTCTTCTCCTTCCCCTCGAGCATTTTGCAGGACAGACGAGGAGCTCTGAGAGAGCCATGGCAAGCGCTGATGTAGAGGCTGTGGACTTTGAGCCCGAGGAAGACGACCTCATGGACGAGGATGGAGCCGCAGAAGCTGATGCCTCCCCGCGAGCTCCTTTTCCCAAGCTCAAATCCGCCATCACCGGCGGCGCGTCTTCCTCACTGGCCGGTCCGAAGAGGACCAAGGGTCGTGGCTTCCGAGAAGAATCTGATCGCAACACCCGCCTTGCGGGGTCGGACTTTGATTCCCTCAAGTCTGCTGATGGCCCTGGCCCCCAAAGATGTTAGTATGCCCTCTCTCTTTCTCTCTCTCTCTCTCTCCCTTCTTCATTACTTAATTTGACACATTGGGTTTTACCATTTCTTTTTTTTTTTGCTTGTTTCTTCCATTCATTATAGCTAGGGTTATGAAACTTTGGATGCTTATTTACTCGGTAGGTGGCGGGTTTAGATATATTGGTCCGTGCGTTCTAAGGAAGGTTGTTTTTTCCTTGAATTTGGGGACTAATAAGTTAGAGTAGGCAGATATTTTCCTTGAGCTTGAAGGGTTCTGCTTATTGTTAATGTCCGTTGGTGTGCCCCTCTCTTGTTTCAACAATGTGACGGATCTTAGGTAAAATTCTCCGATGTTTGTATTTTTTAGGGTTTGTGGATCGGAAGGATGAAGTTAAGTAACCCGAGACTCTTACAACATAGTTTAAAGTTGAATCGTTTATTGCTTTGATATTCTTCTTACATGATTGAAGTCTTTTCGCTGTGAGTTCAACGTTCTATACTTTTTCCCAAGCTGTTGGAGTCGATATTTTGGCTTTTTTTTTTTCTTTTCAACCGTAGACATTATCAACTCAAAAAATTATTGAATAAGTCCCCCACCTTATTATTCATCAAATATCCATATGTTTTTTCAGTAGAAACAATTATATCGAGAGTTTCACGGAATTTGTTATTTATGAAAATTTAGATCTTTATTGGCACGTGGAACCTCACGGGATACTAAATACCTCACAAGTTTCTTGACTTCCTATTTTGATATGGTCGGGTGGTGGTCCTTAGACTTGTGAAAATCAAGAGTTGGAGAATAATTTTCTCCTGTCCTGACCTTTTTATGGGAAACAAATGAAATTTCTCCATTGTCAAAACCTCAATCAACAAGATGACATGATTCTTTGGAAGTTAGAAATAGGGGTATTATTTCCATTGCATTTATTTGTCACCCTTCACTAAAAGTATGTCTCTACTTTGTAAAAGTCTTTCTAAAGTTATGGGGGGTAAGGGAGTTGTGAAATAGTTAGATTCCTTTTGTGGATTTTAGCTTTGACAATTAACATGGGAAATGTTCTTCAAAGGAGAAATCTTAGCCTTCAAATTTCCCCTATTTGCTACCCGCATTGTTATCAAGGTGCAGAAATCCAAAATCATTTGTTTGTCCACTACCATTTTACCCAAAATTTGTCGTGGTTTTTGCTTGACATTGTTAATGACAAATTGGTATGCCCTCCTCTTGGTACAAAAATATTGGAGCAACCATTGGTTGGCAATTCCTTCAAGCTCAAGCTCAAGGTGCTATGGAACTGTTCAGTTAAAGATCATTAAAGTTTTAAGATACTCTCAATTGGTTGAAGATCCTTATAGTTTTTAAGATCTCGGCAAGTCTTTGAGTTAATGTTCCAAGAATTCCTTATTGGTAAAAAGGTTCAAGAAGAGGAGCTTGATTGGATATCTAGTTAGTAGTTACAAAACTTTTGTTAAAGACTCATGGTGTGTTAGTTATATATTGCTTTGCCTCTTGGAGGTAATGTGAAGGTGGTTTCCTTTTGGAGTTTGGTGGTTGAGAGGATCTCTTGCAAATTATCTAAAAGGAAGAATTATCTTCTTTCTTATGGTGGAAGAATAACCTTGGTTTAATTGGATCTTTCAAATGACCTTATTCTCTCTCTCTTTTTGAAGCCACTTCAAATTTTCATTAAGAAGATGAAAGAACAAAAAATAATGAAAAACCCACAACAAAGAAGGGCCCCAACCAAAATGCGGAGAACAACACTAACAACAATTACAAAAAAGATTCTCTACTTTTGGTGATAAAAAATAAAGGATACTACAAAATAAAATTGAATTAAGAGCCCAAAGGAAGCGTTAAAATGCGATGACTTTGAATTCCAAATGTCCCCCATGAACTATCTCTTCCCCAAAACACTATCCTATTCCTTTCCATCCTTTCTAGCTAGATAAACCATAAAACTACAAAGGAATCAGCTTGCCAAAGAACATGGCGCCTTCCTCGAAAAAGAGGGGTTTTGAGTAACCTCCTCAAGCATCTCTCAAATACTTGACCTTTTCACTTAAGTTAAACTGAAACGTTGCCAAAGACGCCTCCATACTAGGGTGGCCAAGGGCATAACCATGACAAGTGATTTAAGTTATTAGAATCACTCCTATAAAGAATGCATAAGTTCGGGCCTAAAACATGAGAGGAGGCTTTGTACAAGATGTTGAAGGTATTAATCCTTTCCAAGGCAACCAACCAAGCAAAGAACCAAAATTTATTCGATAGGGGGAGAAGAAAGAACAAGACGGGGAGGGGGCCAAAGAAGAAAATACTTATAAGAAAAGGGTCTAGAGAGATTGAGGGACCATAAACACTGGTCTTTATACCTAGGCCCTACAAAATTGGAAGTTATAGAAAGTTATTCATAAAATGGAGTTGGTTCAATTGGGGCTTTCAAATGATCTTACTTATTCTCTCTCCATTATTGAAGCCCATTCAAAAGTTATTAAGAAAATGGAGAAGTTAATTAGGAACTTTCTAAGGAGGGGCTAATAGAGAGGATGGCAGCTACATTGTGAAATGCTCAATGGTTCTTTTCGGCTTGGTTGCTCTAAACAAGGAAATTTAGGCCTCTTGGCCTAGCTTGAGATCACATAAGTAGATTATAATCAATAATGGATTGGATTGTCTCCGTTGGTTTACCTGTTCTCCACCATCCTTTTTTCCTAAAGCTCTTGGTTCCAAATGAATCAATTTAGAACTATAGATCAAAGGACATGCAACCAAAGGATATCTTTGTGTCTCTTATCAATAAAAAAAAAAGAAAAGAAAAAAATTTTAGACCTATAGTAAATTGGTTCTCCTATTTTAAGTTGGAAAAGGGGGAAACAATTAAATTTGGAAAGATTATTGGATTTGTCGGGGTGTTTTAGAGCTGCTCATTCCTAGCTTTATGCTCTCTCAAATGTGGAATATTGTTCAGTTGTAGATGTTTGGAGTTCTTGATTTGTGGGTTGGAACGTTGTATCTAGAGACTTTCTTCATGAGGTTGAAACTGATATGGATTAACTTTACTCCCATAATTGAGAGTTTCCATTCTAGTCAGAATGAAGATTCTAAATGTGGACTTTGGATAGTTTGGGGGTCTGAGCATGCAAATCTCTCATGTTTGGACTTCCGTGAGCACTCATGATTATTCAATAGATTGGCTTCCAAGATTTGGCATGCTAAAGTTCCTAAATGATTAAAGTTTCTTTTGCGGCCCTTGCCTTTCAGTTCCATCAATGATAATGATAGGATTCAAAGAAGGGATCCTTGAATCCCCCTCTATCCTCAACAGTGGATTAACTTTTGGAATAGTGCAGAGGATTAGCCACCTTTTTCTTCTACCCCTTTGCCGCAATTGTTGGATGTGGCCTTCTTGGAGATTTGCTGACATTGGTGTTTGCACGGTCTATACTGGTCTTTCTTTTGGAAGCCTACAGTGCTGCCTTTTGGTGCCAAATTGGTGGATCTTTGGTGAATGCTTGTATCAATCTTGTTTGTAACTTATGGTCGGAAAGAAGCAATAGATTTTTCATGTTATTCTAAAACTTGGGAGGATTTCTTTATTTTGTAGCTTTCTTTTGGGGCTCTTTCGATAGAACTTCTAAATGTTCTCCCTCTCTTAGAGATTTAAACTGGGAAGCTCTTTGTAATTTATTGGTTTGAGCTTGGGAGATATGATATCTTATCCTCCTCCCCTTCTGTGCACTCTTGCTGGTTATTTATATGAAGTTTTGTTTACTGGACAAAAAAAAGTGGCCCAGGACTTTTGTTATTTTAAGAAAATAAATTAAAAAACATTTTCCAACGTAAGATTCTATGTCAAGCCTTTTATTCCTTTATGAAGCTTTTTAATGGTAGATTTCATATGGCGTTAAACATAACCTAAACCACTTTGTGACATTTTTGCACGCGATCTCATGAGTTCAAAACTATCTTTCGTTTCTTACATTAAAAAAAGAAATGAAGACTATCCTAACCCTGATTTAATTCCTACAATAAATGGTATTTGCGTAATTTATCCCCTTGCTTGTGCAGAAAGGTGGGGGGTTCTGTTGCTTCTTACTTTTGCAATTTAACCTTTTTCTTAAAAAGAAAATCTCTATCAACTACACTCACTGGTAGCCTGATTGAGCAATCTAATACAACTTATCCTGGACCAGAAGTTACGAACTTTTACCTGCTCTTCAGTATTGCTGCTTTTAAGATTTTTCAGAAGGGCAGCTACAACCTAATGGTGTCTGTTCTCGTTGTCTTAGCTTTCTGAGCATATCCTTGGTACTCAGTTGTCAGCTAGAAATGTTTGATTTTGTGATATAAATAGTTATAGAATAGTTCATATTGAGGGCCATAGATCCTTTACTATTTCACCTCATAGGAGTTTCTGATTTAGTTACTGTGTGTAGCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAGGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGATCGTCGTACTGGGTTTGTTAAGGTATATTTGGTTACTCTATTATTTATTTTTTCCCACAGGAAACATGAATTTATATAGTTTATTTGTTTCGTATAAAAAAGGAAGAATATAAATATATTTGTTTATTTTATAGTAAAAAAATGGAGTAACTTGAAAATTTTGAAAGGAATCAGAATGGAAATGTCATATTTTGCTAATGATCGATGGTTTATGAGAAGAATAGAGTAGTATTGTAGTAGTTTTTATATTTGAAAACAATTTTTTATTGGATCTATACGACATTAGTTCCCCTACCCTTCTTGGAAGAAGCACATTAAGTAGTTTTAATATTAAACGAGTTCTACTAAATAGTTGCCCCACCTTTTGTGGTGTACTTTTCCCCCTCCTTTTCATAATTATATTTCTTTGTTAATTCTAACGATTGGAGTAATTTTTGCCGAGCTCCATTTGTTCTTTTTTGTAGCTTTCTTGATGGTGTTCCTTATGAAAATTAATTAATTAAACAAGGACTGCCAAAAAGGTTGGAGGTTAAGATGATGTCCTCCACAAAGATTCTGCATAATTGTAAACCAGCTACAATGCAATACCTAAATTGAGCAAGGAGTACCAAAAGATTGGAGATAAAGATGTCCTCCACCTAAAATTTTACAGAACAGTAAGCTAGCTACAATGCAATAAAGAACATAAATGTGTATCAATTTAGCAGCACAAGAAGACATTTTAACTCTACTCAAATAATGAGGATCTGCTAACTTATCCTAAAAGATTTTCTGAATATGTCCTGATCTGATTGACAAAAGCATAGAAATGCACGTTTCCAAGGAGTTTGTTGTTGTAAAAGGAATCCCGCAAAGTAATACAGGTGCACATTGAGGAAAAATCCAATGACCTCTTAACCCCTTGAGAATCTTGAAAGACAGCAATCTAGGGATGTTCCTATGAAGAAATTAGTGGTTCATAGAATTGACTTTTAGATCCATAATTCATCAAAATGGAGATAAGCAACAGGGACACTTTATTGTATTTATTTTTTTACCTCTGGTAAAGTCACATATCAATTGCTGACACAGTCTTCCCTCTAGAATCGATCATGTGGATCAACTTTCATGATAAAGTTTACGGGAGGGTTTAGGGTTCGCATGATGCAGTCCACAGCTAGTGCCATCAACCTCTTAGATAACTTCTTCTAATCTCTTCCACCATTTCTTTAAGTTAGATTGTTAATCCACCAAGTCCCAACCAAACTTTATGCTGGGCTTTGGAACCATTTTTCTTCAGTTCTTGTGATGCTTGTTTTTTGTTTTTTTTTTTTTTGAACCAGCCTATATTTGTTTCTTGTTGTTCATTTATCATTCGAATTTATGGATGAACTGATGCATTAGTGTGAACTGGGATGAGTTGAGGACTTCCCTGGTAAAGTCATTTATCATTCGATTTTTTTTTCTTGGAAAAAAAATGCATCACAATGAAGAAAATACATAAGGATCGAGCAAGGAAAACAAAGACATCTTTCTAAACCTAAAAGGCTCAAAGAATATTACAAAAATGCTCCCCAATTTGAATCAATAAAAAATTAGAATAATTATGAAAGGCTTGACGACAAACTTTTGTATAGCCGTTTTGTTTTGTACTTCCATATCTCAATGAAAGTTGGTTTCTTATCCCCCAAGTAAGGAAAAAGGTAATGAGGTGTACCGCCTAATCTGTTGCTGTACTTAGGATAATCTTTTTTATAACATTATCATCATCATTCCCTTGTTATGTGATAACTGTATAATTTTGTACCCGCCTCAGATTTTAGTCAAATTAACACCATGTTTCATTACAGATGCAGTCAATGATATGAAGCTATTGCAGCATATAATATCATTTTGGCACATTCACATTTATGTTATGTTTGTCGAGTTGGTCCAAATATGGAAATATCTCCCTTCTATTCTATTAATTTATTCTTATATATGCCACTCTCTTGCTGGAATCTGTATATCACAATAATCTGCCGTTTGTATAGAAACTTAATATCACAATAATCTGCTTTGCCATAGCTGTTTCAGTCGAGAAATCTGAGCATTACACTTCGAGATCTGGATTACTTCAGTGTTAGCCATTTGTATAGGAAACATACTGTATATCACAATAATTCGATTTGCCATAGCTATTTTGCTGGAAATTTGAGCATTACACTTTGGGATATCTATAATTTGATATGTTTAAGTTCCTAACATATAAATGGTGTTAGCCATTTATATCTTGAGTTGATTGAGGATGACTACTATTTGGGTTTCATCATGTTCCATTGTTTTCTGTGTTATCTTTACCCGACTCTCAGATATTTACCAATTTTCTGTTGTGCTGATGTGCTGATTTTCTGATTTTGGTTTTGCTAAGGGATATGCGTTGATCGAATTTGAGAACTATGAGGAAGCGGAGAGAGCCATATCTGCCATGGATGGAGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGAAAGAACACAAGGTAAGCTTCTCCAAGATTCATTGAAAGATTAGCATAGGGGATGATCAAATGTTTGGATCATGGGAAATTCATAGACCATATTTTTTCTAATTTAATCACAGACCTGCACGGGAACGGCGTTCGAGGAGCCCTAGGAGGAGATATTGATTTTGAGGTGTAGAACTCCATGTGTGGTGTTTATGGATTTTATTTGGGAACGCGTTTCCTTGTTGATTGGAATAGGAGATGTTTCTACTGAGCTTTACTCAATGTCTCAAGATTCCCCTGCTTCCCAGCCCTTCTTTTTCTCGGACGTTGATTTGGATTGA

mRNA sequence

TCGGAGGAGGTGCCATATTCCGGGGACTTGTCGCCAATTCGGAGAAGAAGACTCTTCCAGCTGCTCATTCTCCCTAGAATAGGACTTTTTCTAGACGGAAAATGGAGGAGATGGGGAAGTGGGTTCGGATTAACACGCGGGCCTGTAGAAGCAGGGGAGTTTTCGGAGCAGGAAGAGCCTAGCAGTGAGGAGTGGGGGTTTAGAGAGAGAAGTGGAAGAGAGAATTTTAGCTTGGAGAAAAGAACGAGCTGCGGGCAAACCAGAAACCCTCGTTTCGATCCCCAAAAACCCCACACCATCCCATTTCCTTCTCTTCTCCTTCCCCTCGAGCATTTTGCAGGACAGACGAGGAGCTCTGAGAGAGCCATGGCAAGCGCTGATGTAGAGGCTGTGGACTTTGAGCCCGAGGAAGACGACCTCATGGACGAGGATGGAGCCGCAGAAGCTGATGCCTCCCCGCGAGCTCCTTTTCCCAAGCTCAAATCCGCCATCACCGGCGGCGCGTCTTCCTCACTGGCCGGTCCGAAGAGGACCAAGGGTCGTGGCTTCCGAGAAGAATCTGATCGCAACACCCGCCTTGCGGGGTCGGACTTTGATTCCCTCAAGTCTGCTGATGGCCCTGGCCCCCAAAGATCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAGGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGATCGTCGTACTGGGTTTGTTAAGGGATATGCGTTGATCGAATTTGAGAACTATGAGGAAGCGGAGAGAGCCATATCTGCCATGGATGGAGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGAAAGAACACAAGAACTCCATGTGTGGTGTTTATGGATTTTATTTGGGAACGCGTTTCCTTGTTGATTGGAATAGGAGATGTTTCTACTGAGCTTTACTCAATGTCTCAAGATTCCCCTGCTTCCCAGCCCTTCTTTTTCTCGGACGTTGATTTGGATTGA

Coding sequence (CDS)

TCGGAGGAGGTGCCATATTCCGGGGACTTGTCGCCAATTCGGAGAAGAAGACTCTTCCAGCTGCTCATTCTCCCTAGAATAGGACTTTTTCTAGACGGAAAATGGAGGAGATGGGGAAGTGGGTTCGGATTAACACGCGGGCCTGTAGAAGCAGGGGAGTTTTCGGAGCAGGAAGAGCCTAGCAGTGAGGAGTGGGGGTTTAGAGAGAGAAGTGGAAGAGAGAATTTTAGCTTGGAGAAAAGAACGAGCTGCGGGCAAACCAGAAACCCTCGTTTCGATCCCCAAAAACCCCACACCATCCCATTTCCTTCTCTTCTCCTTCCCCTCGAGCATTTTGCAGGACAGACGAGGAGCTCTGAGAGAGCCATGGCAAGCGCTGATGTAGAGGCTGTGGACTTTGAGCCCGAGGAAGACGACCTCATGGACGAGGATGGAGCCGCAGAAGCTGATGCCTCCCCGCGAGCTCCTTTTCCCAAGCTCAAATCCGCCATCACCGGCGGCGCGTCTTCCTCACTGGCCGGTCCGAAGAGGACCAAGGGTCGTGGCTTCCGAGAAGAATCTGATCGCAACACCCGCCTTGCGGGGTCGGACTTTGATTCCCTCAAGTCTGCTGATGGCCCTGGCCCCCAAAGATCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAGGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGATCGTCGTACTGGGTTTGTTAAGGGATATGCGTTGATCGAATTTGAGAACTATGAGGAAGCGGAGAGAGCCATATCTGCCATGGATGGAGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGAAAGAACACAAGAACTCCATGTGTGGTGTTTATGGATTTTATTTGGGAACGCGTTTCCTTGTTGATTGGAATAGGAGATGTTTCTACTGAGCTTTACTCAATGTCTCAAGATTCCCCTGCTTCCCAGCCCTTCTTTTTCTCGGACGTTGATTTGGATTGA

Protein sequence

SEEVPYSGDLSPIRRRRLFQLLILPRIGLFLDGKWRRWGSGFGLTRGPVEAGEFSEQEEPSSEEWGFRERSGRENFSLEKRTSCGQTRNPRFDPQKPHTIPFPSLLLPLEHFAGQTRSSERAMASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPKRTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRKNTRTPCVVFMDFIWERVSLLIGIGDVSTELYSMSQDSPASQPFFFSDVDLD
Homology
[Close]
BLAST of Sgr017579 vs. NCBI nr
Match: XP_022154366.1 (RNA-binding protein Y14A [Momordica charantia])

HSP 1 Score: 352.8 bits (904), Expect = 3.4e-93
Identity = 176/182 (96.70%), Postives = 182/182 (100.00%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPKRTKGRG 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPK+TKGRG
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPKKTKGRG 60

Query: 183 FREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEI 242
           FR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEI
Sbjct: 61  FRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEI 120

Query: 243 KNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRKN 302
           KNLHLNLDRRTGFVKGYALIE+E++EEAERAISAMDG+ELLTQIINVDWAFSHGPIRRKN
Sbjct: 121 KNLHLNLDRRTGFVKGYALIEYESFEEAERAISAMDGSELLTQIINVDWAFSHGPIRRKN 180

Query: 303 TR 305
           TR
Sbjct: 181 TR 182

[Close]
BLAST of Sgr017579 vs. NCBI nr
Match: XP_022961208.1 (RNA-binding protein Y14-like [Cucurbita moschata] >XP_023516370.1 RNA-binding protein Y14-like [Cucurbita pepo subsp. pepo] >KAG6590187.1 RNA-binding protein Y14, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023840.1 RNA-binding protein Y14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.4 bits (890), Expect = 1.4e-91
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKRTKGR 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA GPK+TKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 183 GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 242
           GFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 243 IKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRK 302
           I+NLHLNLDRRTGFVKGYALIE+EN+EEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 303 NTR 305
           NTR
Sbjct: 181 NTR 183

[Close]
BLAST of Sgr017579 vs. NCBI nr
Match: XP_038880227.1 (RNA-binding protein Y14A [Benincasa hispida])

HSP 1 Score: 347.1 bits (889), Expect = 1.8e-91
Identity = 175/183 (95.63%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKRTKGR 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA GPK+TKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 183 GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 242
           GFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120

Query: 243 IKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRK 302
           IKNLHLNLDRRTGFVKGYALIE+E++EEAE+AISAMDGAELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 303 NTR 305
           NTR
Sbjct: 181 NTR 183

[Close]
BLAST of Sgr017579 vs. NCBI nr
Match: XP_004139049.1 (RNA-binding protein Y14 [Cucumis sativus] >XP_008450386.1 PREDICTED: RNA-binding protein 8A-B [Cucumis melo] >KGN66511.1 hypothetical protein Csa_007313 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 3.1e-91
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKRTKGR 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+ GPK+TKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 183 GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 242
           GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 243 IKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRK 302
           IKNLHLNLDRRTGFVKGYALIE+E++EEAE+AISAMDGAELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 303 NTR 305
           N R
Sbjct: 181 NAR 183

[Close]
BLAST of Sgr017579 vs. NCBI nr
Match: XP_022988215.1 (RNA-binding protein Y14A-like [Cucurbita maxima])

HSP 1 Score: 343.6 bits (880), Expect = 2.0e-90
Identity = 173/183 (94.54%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKRTKGR 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSLA GPK+TKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPLAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 183 GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 242
           GFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFRQESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 243 IKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRK 302
           I+NLHLNLDRRTGFVKGYALIE+EN+EEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 303 NTR 305
           NTR
Sbjct: 181 NTR 183

[Close]
BLAST of Sgr017579 vs. ExPASy Swiss-Prot
Match: B7FAL5 (RNA-binding protein Y14A OS=Oryza sativa subsp. japonica OX=39947 GN=Y14A PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.4e-62
Identity = 125/191 (65.45%), Postives = 153/191 (80.10%), Query Frame = 0 

Query: 122 AMASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA---GPKRT 181
           A+ +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG         G ++T
Sbjct: 3   AVTNADVEAVDFDPDDDDLMDEDA---ADPTP-APAPRLRSTIAGGGGGGGGGDDGQRKT 62

Query: 182 KGRGFREE-SDRNTRLAG----SDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQ 241
           KGRGFR++ + R++RLAG    SDFDSL S  GPGP RSIEGWI+LVTGVHEEAQEDDL 
Sbjct: 63  KGRGFRDDAAPRDSRLAGAGRASDFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQEDDLH 122

Query: 242 NAFGEFGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAF 301
           N F +FG++KNLHLNLDRRTGFVKGYALIE+E +EEA+ AI A+DG ELLTQII+VDWAF
Sbjct: 123 NIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAF 182

Query: 302 SHGPIRRKNTR 305
           S+GP++R+N R
Sbjct: 183 SNGPVKRRNIR 189

[Close]
BLAST of Sgr017579 vs. ExPASy Swiss-Prot
Match: F4I9J7 (RNA-binding protein Y14 OS=Arabidopsis thaliana OX=3702 GN=Y14 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.7e-61
Identity = 129/191 (67.54%), Postives = 150/191 (78.53%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGPKRTKG 182
           MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S    K+TKG
Sbjct: 1   MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGES---AKKTKG 60

Query: 183 RGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGE 242
           RGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWIILV+GVHEE QE+D+ NAFG+
Sbjct: 61  RGFREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGD 120

Query: 243 FGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGP- 302
           FGEIKNL+LNLDRR+G+VKGYALIE+E  EEA+ AISAM+GAELLTQ ++VDWAFS GP 
Sbjct: 121 FGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPS 180

Query: 303 ----IRRKNTR 305
                RRKN+R
Sbjct: 181 GGESYRRKNSR 188

[Close]
BLAST of Sgr017579 vs. ExPASy Swiss-Prot
Match: Q6ATR0 (RNA-binding protein Y14B OS=Oryza sativa subsp. japonica OX=39947 GN=Y14B PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.9e-39
Identity = 93/193 (48.19%), Postives = 123/193 (63.73%), Query Frame = 0 

Query: 122 AMASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPKRT 181
           A A+ DVE VD+   E EE+D MDED           P P + S           G  R+
Sbjct: 2   AAAAEDVEFVDYDRDEEEEEDAMDEDDRGGGRGGRALPVPHIVS----------QGVMRS 61

Query: 182 KGRGFREESDRNTRLAGSD---FDSLKSADGP--GPQRSIEGWIILVTGVHEEAQEDDLQ 241
           +GR       R+T +  S+   FDSL  A  P  GPQRSIEGWI+LV+GV E+A+EDDL 
Sbjct: 62  RGRLL----GRSTSVLASNRDRFDSLADAGNPGHGPQRSIEGWILLVSGVKEDAEEDDLY 121

Query: 242 NAFGEFGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAF 301
           N F +FG +K+LHLNL+RRTG+ KGYAL+E+E++EEA+ AI AM+G +LLT+ + VDWAF
Sbjct: 122 NTFSDFGHVKDLHLNLERRTGYAKGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAF 180

Query: 302 SHGPIRRKNTRTP 307
           S GPI++  +  P
Sbjct: 182 SRGPIQKLTSTRP 180

[Close]
BLAST of Sgr017579 vs. ExPASy Swiss-Prot
Match: Q5D018 (RNA-binding protein 8A OS=Danio rerio OX=7955 GN=rbm8a PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-36
Identity = 72/127 (56.69%), Postives = 96/127 (75.59%), Query Frame = 0 

Query: 176 KRTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQN 235
           K+ KGRGF  E    +R+   D+D++ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ +
Sbjct: 33  KKRKGRGFGSEEGARSRVR-EDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHD 92

Query: 236 AFGEFGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFS 295
            F EFGEIKNLHLNLDRRTG++KGYAL+E+E Y+EA+ A+  ++G EL+ Q I+VDW F 
Sbjct: 93  KFAEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQELMGQPISVDWCFV 152

Query: 296 HGPIRRK 302
            GP + K
Sbjct: 153 RGPPKSK 158

[Close]
BLAST of Sgr017579 vs. ExPASy Swiss-Prot
Match: Q6PH90 (RNA-binding protein 8A-B OS=Xenopus laevis OX=8355 GN=rbm8a-b PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.0e-36
Identity = 89/188 (47.34%), Postives = 117/188 (62.23%), Query Frame = 0 

Query: 126 ADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPKRTKGRGFRE 185
           ADV  +     ED  MDEDG    D S      KLK              K+ KGRGF  
Sbjct: 2   ADVLDLHEAGGEDFAMDEDG----DES----IHKLKEK-----------AKKRKGRGFGA 61

Query: 186 ESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKN 245
           +    TR+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + FGEFGEIKN
Sbjct: 62  DEGTRTRIR-EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFGEFGEIKN 121

Query: 246 LHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIR----- 305
           +HLNLDRRTGF+KGYAL+E+E Y+EA  A+  ++G +L+ Q ++VDW F  GP +     
Sbjct: 122 IHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFVRGPPKGKRRS 169

Query: 306 -RKNTRTP 307
            R+ +R+P
Sbjct: 182 GRRRSRSP 169

[Close]
BLAST of Sgr017579 vs. ExPASy TrEMBL
Match: A0A6J1DNH7 (RNA-binding protein Y14A OS=Momordica charantia OX=3673 GN=LOC111021647 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.6e-93
Identity = 176/182 (96.70%), Postives = 182/182 (100.00%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPKRTKGRG 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPK+TKGRG
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGPKKTKGRG 60

Query: 183 FREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEI 242
           FR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEI
Sbjct: 61  FRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEI 120

Query: 243 KNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRKN 302
           KNLHLNLDRRTGFVKGYALIE+E++EEAERAISAMDG+ELLTQIINVDWAFSHGPIRRKN
Sbjct: 121 KNLHLNLDRRTGFVKGYALIEYESFEEAERAISAMDGSELLTQIINVDWAFSHGPIRRKN 180

Query: 303 TR 305
           TR
Sbjct: 181 TR 182

[Close]
BLAST of Sgr017579 vs. ExPASy TrEMBL
Match: A0A6J1HB67 (RNA-binding protein Y14-like OS=Cucurbita moschata OX=3662 GN=LOC111461789 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 6.8e-92
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKRTKGR 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA GPK+TKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 183 GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 242
           GFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 243 IKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRK 302
           I+NLHLNLDRRTGFVKGYALIE+EN+EEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 303 NTR 305
           NTR
Sbjct: 181 NTR 183

[Close]
BLAST of Sgr017579 vs. ExPASy TrEMBL
Match: A0A0A0M2V3 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G616290 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.5e-91
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKRTKGR 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+ GPK+TKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 183 GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 242
           GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 243 IKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRK 302
           IKNLHLNLDRRTGFVKGYALIE+E++EEAE+AISAMDGAELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 303 NTR 305
           N R
Sbjct: 181 NAR 183

[Close]
BLAST of Sgr017579 vs. ExPASy TrEMBL
Match: A0A1S3BNH9 (RNA-binding protein 8A-B OS=Cucumis melo OX=3656 GN=LOC103492008 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.5e-91
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKRTKGR 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+ GPK+TKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 183 GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 242
           GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 243 IKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRK 302
           IKNLHLNLDRRTGFVKGYALIE+E++EEAE+AISAMDGAELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 303 NTR 305
           N R
Sbjct: 181 NAR 183

[Close]
BLAST of Sgr017579 vs. ExPASy TrEMBL
Match: A0A6J1JIZ0 (RNA-binding protein Y14A-like OS=Cucurbita maxima OX=3661 GN=LOC111485519 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 9.9e-91
Identity = 173/183 (94.54%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKRTKGR 182
           MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSLA GPK+TKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPLAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 183 GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 242
           GFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFRQESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 243 IKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGPIRRK 302
           I+NLHLNLDRRTGFVKGYALIE+EN+EEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 303 NTR 305
           NTR
Sbjct: 181 NTR 183

[Close]
BLAST of Sgr017579 vs. TAIR 10
Match: AT1G51510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-62
Identity = 129/191 (67.54%), Postives = 150/191 (78.53%), Query Frame = 0 

Query: 123 MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGPKRTKG 182
           MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S    K+TKG
Sbjct: 1   MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGES---AKKTKG 60

Query: 183 RGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGE 242
           RGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWIILV+GVHEE QE+D+ NAFG+
Sbjct: 61  RGFREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGD 120

Query: 243 FGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQIINVDWAFSHGP- 302
           FGEIKNL+LNLDRR+G+VKGYALIE+E  EEA+ AISAM+GAELLTQ ++VDWAFS GP 
Sbjct: 121 FGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPS 180

Query: 303 ----IRRKNTR 305
                RRKN+R
Sbjct: 181 GGESYRRKNSR 188

[Close]
BLAST of Sgr017579 vs. TAIR 10
Match: AT3G11400.1 (eukaryotic translation initiation factor 3G1 )

HSP 1 Score: 59.3 bits (142), Expect = 7.2e-09
Identity = 37/126 (29.37%), Postives = 67/126 (53.17%), Query Frame = 0 

Query: 167 GASSSLAGPKRTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEE 226
           G SS+++    T    +   S R    AG+D    +SA G   +R  +   + VT + E+
Sbjct: 172 GESSTMSAAPGTGKAAYVPPSMR----AGAD----RSAVGSDMRRRNDENSVRVTNLSED 231

Query: 227 AQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQI 286
            +E DL   F  FG +  +++ +D++TG  +G+  + F + E+A+RAI+ ++G      I
Sbjct: 232 TREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLI 289

Query: 287 INVDWA 293
           + V+WA
Sbjct: 292 LRVEWA 289

[Close]
BLAST of Sgr017579 vs. TAIR 10
Match: AT3G11400.2 (eukaryotic translation initiation factor 3G1 )

HSP 1 Score: 59.3 bits (142), Expect = 7.2e-09
Identity = 37/126 (29.37%), Postives = 67/126 (53.17%), Query Frame = 0 

Query: 167 GASSSLAGPKRTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEE 226
           G SS+++    T    +   S R    AG+D    +SA G   +R  +   + VT + E+
Sbjct: 199 GESSTMSAAPGTGKAAYVPPSMR----AGAD----RSAVGSDMRRRNDENSVRVTNLSED 258

Query: 227 AQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAELLTQI 286
            +E DL   F  FG +  +++ +D++TG  +G+  + F + E+A+RAI+ ++G      I
Sbjct: 259 TREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLI 316

Query: 287 INVDWA 293
           + V+WA
Sbjct: 319 LRVEWA 316

[Close]
BLAST of Sgr017579 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-08
Identity = 25/75 (33.33%), Postives = 45/75 (60.00%), Query Frame = 0 

Query: 218 ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAM 277
           + + G+     ED L+ AF ++GE+ +  + LDR TG  +G+  + F + E A  AI A+
Sbjct: 42  LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101

Query: 278 DGAELLTQIINVDWA 293
           DG +L  +++ V++A
Sbjct: 102 DGRDLHGRVVKVNYA 116

[Close]
BLAST of Sgr017579 vs. TAIR 10
Match: AT1G16610.1 (arginine/serine-rich 45 )

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-07
Identity = 37/144 (25.69%), Postives = 63/144 (43.75%), Query Frame = 0 

Query: 170 SSLAGPKRTKGRGFREESDRNTRLAG-------SDFDSLKSADGPGPQRSIEGWIILVTG 229
           SS + P R+   G R    R    AG             K A  P  +   E  ++ V  
Sbjct: 45  SSSSSPSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKAVQESLVLHVDS 104

Query: 230 VHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEFENYEEAERAISAMDGAEL 289
           +     E  L+  FG FGE+ ++ + +DR     +G+  +EF+   +AE+A   MDGA++
Sbjct: 105 LSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQI 164

Query: 290 LTQIINVDWAFSHGPIRRKNTRTP 307
             +++   +     P R+K +  P
Sbjct: 165 DGKVVKATFTL---PPRQKVSSPP 185

The following BLAST results are available for this feature:
BLAST of Sgr017579 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022154366.13.4e-9396.70RNA-binding protein Y14A [Momordica charantia][more]
XP_022961208.11.4e-9195.63RNA-binding protein Y14-like [Cucurbita moschata] >XP_023516370.1 RNA-binding pr... [more]
XP_038880227.11.8e-9195.63RNA-binding protein Y14A [Benincasa hispida][more]
XP_004139049.13.1e-9195.63RNA-binding protein Y14 [Cucumis sativus] >XP_008450386.1 PREDICTED: RNA-binding... [more]
XP_022988215.12.0e-9094.54RNA-binding protein Y14A-like [Cucurbita maxima][more]
BLAST of Sgr017579 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B7FAL55.4e-6265.45RNA-binding protein Y14A OS=Oryza sativa subsp. japonica OX=39947 GN=Y14A PE=1 S... [more]
F4I9J72.7e-6167.54RNA-binding protein Y14 OS=Arabidopsis thaliana OX=3702 GN=Y14 PE=1 SV=1[more]
Q6ATR02.9e-3948.19RNA-binding protein Y14B OS=Oryza sativa subsp. japonica OX=39947 GN=Y14B PE=1 S... [more]
Q5D0181.3e-3656.69RNA-binding protein 8A OS=Danio rerio OX=7955 GN=rbm8a PE=2 SV=1[more]
Q6PH903.0e-3647.34RNA-binding protein 8A-B OS=Xenopus laevis OX=8355 GN=rbm8a-b PE=2 SV=1[more]
BLAST of Sgr017579 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DNH71.6e-9396.70RNA-binding protein Y14A OS=Momordica charantia OX=3673 GN=LOC111021647 PE=4 SV=... [more]
A0A6J1HB676.8e-9295.63RNA-binding protein Y14-like OS=Cucurbita moschata OX=3662 GN=LOC111461789 PE=4 ... [more]
A0A0A0M2V31.5e-9195.63RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G616290 PE=4 SV... [more]
A0A1S3BNH91.5e-9195.63RNA-binding protein 8A-B OS=Cucumis melo OX=3656 GN=LOC103492008 PE=4 SV=1[more]
A0A6J1JIZ09.9e-9194.54RNA-binding protein Y14A-like OS=Cucurbita maxima OX=3661 GN=LOC111485519 PE=4 S... [more]
BLAST of Sgr017579 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G51510.11.9e-6267.54RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G11400.17.2e-0929.37eukaryotic translation initiation factor 3G1 [more]
AT3G11400.27.2e-0929.37eukaryotic translation initiation factor 3G1 [more]
AT5G61030.12.7e-0833.33glycine-rich RNA-binding protein 3 [more]
AT1G16610.11.8e-0725.69arginine/serine-rich 45 [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008111RNA-binding motif protein 8PRINTSPR01738RNABINDINGM8coord: 281..293
score: 55.38
coord: 172..184
score: 46.92
coord: 207..221
score: 79.33
coord: 263..279
score: 41.76
IPR008111RNA-binding motif protein 8PANTHERPTHR45894RNA-BINDING PROTEIN 8Acoord: 122..304
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 217..290
e-value: 8.5E-20
score: 81.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 218..282
e-value: 9.7E-16
score: 57.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 216..294
score: 16.295467
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 165..305
e-value: 4.5E-29
score: 103.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..77
NoneNo IPR availablePANTHERPTHR45894:SF6RNA-BINDING PROTEIN Y14A-LIKEcoord: 122..304
IPR033744RBM8, RNA recognition motifCDDcd12324RRM_RBM8coord: 210..297
e-value: 4.76508E-60
score: 185.884
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 209..300

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr017579.1Sgr017579.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010628 positive regulation of gene expression
biological_process GO:0008380 RNA splicing
biological_process GO:0006396 RNA processing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0035145 exon-exon junction complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding