Sgr017560 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017560
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153049: 743685 .. 744147 (-)
RNA-Seq Expression	Sgr017560
Synteny	Sgr017560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGATGCACCACACTGCCTTCAAGAACCAGACCACCGAGTCGGAACTTGTTCTTCGACGGATTCACGGAGTATTCTCGAGGGCATCGGTTGGGGTCACGTAGAACATCAGATGCTCCTGAAAATTACTGAGGACGATGACAATGAACCCCGCAATGCAGCTGAAGGTCAGAGCATAGGTCCAGAGCCGCCGCGTCTGGAGCTGCCTGGCGCGGGCTCCGATGTCTACTTGCTTCGGACGGGTGAGATGCCGCCGAGCAGTTGAGAGCAAACGAAACCCAGAAAAATTGAAGACCGACCCATCAGGAATTCGATGAAAATCAGAAAGTGAGGAGGTAAAAGGTGAAGATTTGGAGATGGGGGGAGCTGGAATGTGGTGGAAAGTGGAGTGGAAACGAGCTGACCGCAAGAAGAGCTGTGATCTGAGCCTGAGAGCAAGAGAGGCAGCCATTAGAGATTGA

mRNA sequence

ATGCCGGATGCACCACACTGCCTTCAAGAACCAGACCACCGAGTCGGAACTTGTTCTTCGACGGATTCACGGAGTATTCTCGAGGGCATCGGTTGGGGTCACGTAGAACATCAGATGCTCCTGAAAATTACTGAGGACGATGACAATGAACCCCGCAATGCAGCTGAAGGTCAGAGCATAGGTCCAGAGCCGCCGCGTCTGGAGCTGCCTGGCGCGGGCTCCGATGTCTACTTGCTTCGGACGGAAAGTGAGGAGGTAAAAGGTGAAGATTTGGAGATGGGGGGAGCTGGAATGTGGTGGAAAGTGGAGTGGAAACGAGCTGACCGCAAGAAGAGCTGTGATCTGAGCCTGAGAGCAAGAGAGGCAGCCATTAGAGATTGA

Coding sequence (CDS)

ATGCCGGATGCACCACACTGCCTTCAAGAACCAGACCACCGAGTCGGAACTTGTTCTTCGACGGATTCACGGAGTATTCTCGAGGGCATCGGTTGGGGTCACGTAGAACATCAGATGCTCCTGAAAATTACTGAGGACGATGACAATGAACCCCGCAATGCAGCTGAAGGTCAGAGCATAGGTCCAGAGCCGCCGCGTCTGGAGCTGCCTGGCGCGGGCTCCGATGTCTACTTGCTTCGGACGGAAAGTGAGGAGGTAAAAGGTGAAGATTTGGAGATGGGGGGAGCTGGAATGTGGTGGAAAGTGGAGTGGAAACGAGCTGACCGCAAGAAGAGCTGTGATCTGAGCCTGAGAGCAAGAGAGGCAGCCATTAGAGATTGA

Protein sequence

MPDAPHCLQEPDHRVGTCSSTDSRSILEGIGWGHVEHQMLLKITEDDDNEPRNAAEGQSIGPEPPRLELPGAGSDVYLLRTESEEVKGEDLEMGGAGMWWKVEWKRADRKKSCDLSLRAREAAIRD

Homology

[Close]

BLAST of Sgr017560 vs. NCBI nr
Match: POO03302.1 (hypothetical protein TorRG33x02_013630, partial [Trema orientale])

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-08
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 23  SRSILEGIGWGHVEHQMLLKITEDDDNEPRNAAEGQSIGPEPPRLELPGAGSDV 77
           S   +EG GWG VE Q++L+  EDDD+EP +AAE + + PEPP L LPG G+DV
Sbjct: 99  SHEFVEGFGWGDVEDQLVLEGVEDDDDEPGDAAEAEGVEPEPPGLHLPGPGTDV 152

[Close]

BLAST of Sgr017560 vs. NCBI nr
Match: PON63640.1 (hypothetical protein PanWU01x14_129720, partial [Parasponia andersonii])

HSP 1 Score: 68.6 bits (166), Expect = 4.5e-08
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 23  SRSILEGIGWGHVEHQMLLKITEDDDNEPRNAAEGQSIGPEPPRLELPGAGSDV 77
           S   +EG GWG VE Q++L+  EDDD+EP +AAE + + PEPP L LPG G+DV
Sbjct: 99  SYEFVEGFGWGDVEDQLVLEGVEDDDDEPSDAAEAEGVEPEPPGLHLPGPGTDV 152

[Close]

BLAST of Sgr017560 vs. ExPASy TrEMBL
Match: A0A2P5FZU5 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_013630 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-08
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 23  SRSILEGIGWGHVEHQMLLKITEDDDNEPRNAAEGQSIGPEPPRLELPGAGSDV 77
           S   +EG GWG VE Q++L+  EDDD+EP +AAE + + PEPP L LPG G+DV
Sbjct: 99  SHEFVEGFGWGDVEDQLVLEGVEDDDDEPGDAAEAEGVEPEPPGLHLPGPGTDV 152

[Close]

BLAST of Sgr017560 vs. ExPASy TrEMBL
Match: A0A2P5CRG1 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_129720 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 23  SRSILEGIGWGHVEHQMLLKITEDDDNEPRNAAEGQSIGPEPPRLELPGAGSDV 77
           S   +EG GWG VE Q++L+  EDDD+EP +AAE + + PEPP L LPG G+DV
Sbjct: 99  SYEFVEGFGWGDVEDQLVLEGVEDDDDEPSDAAEAEGVEPEPPGLHLPGPGTDV 152

The following BLAST results are available for this feature:

BLAST of Sgr017560 vs. NCBI nr


Match Name	E-value	Identity	Description
POO03302.1	3.5e-08	55.56	hypothetical protein TorRG33x02_013630, partial [Trema orientale]	[more]
PON63640.1	4.5e-08	55.56	hypothetical protein PanWU01x14_129720, partial [Parasponia andersonii]	[more]

BLAST of Sgr017560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr017560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5FZU5	1.7e-08	55.56	Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_013...	[more]
A0A2P5CRG1	2.2e-08	55.56	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]

BLAST of Sgr017560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017560.1	Sgr017560.1	mRNA