Sgr017330 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017330
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	glycine-rich protein
Location	tig00153037: 1237609 .. 1237857 (-)
RNA-Seq Expression	Sgr017330
Synteny	Sgr017330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGCGGCGGACAAGGTGGCCGAGGATGCGGCGACGGTAGCAAAGGTGGAGGAGGAGGCGGCGGCCGGAGCAGCAAGAGTGGTGGTGGAAGTGAAGCAGGTGGCAAAAGTGGCAGCGGAGGTGGCGGTGAAATGATGGTTGCTCCTGGAAAAGGAGGAAATGTTTATATCTCGCGAGATGTATTTGAGAGCAATCCTAAAGGTTATTTTGATGATCATCGTGCAGCCAAAAAGGGTGACAAGTAG

mRNA sequence

ATGGCTGGCGGCGGACAAGGTGGCCGAGGATGCGGCGACGGTAGCAAAGGTGGAGGAGGAGGCGGCGGCCGGAGCAGCAAGAGTGGTGGTGGAAGTGAAGCAGGTGGCAAAAGTGGCAGCGGAGGTGGCGGTGAAATGATGGTTGCTCCTGGAAAAGGAGGAAATGTTTATATCTCGCGAGATGTATTTGAGAGCAATCCTAAAGGTTATTTTGATGATCATCGTGCAGCCAAAAAGGGTGACAAGTAG

Coding sequence (CDS)

ATGGCTGGCGGCGGACAAGGTGGCCGAGGATGCGGCGACGGTAGCAAAGGTGGAGGAGGAGGCGGCGGCCGGAGCAGCAAGAGTGGTGGTGGAAGTGAAGCAGGTGGCAAAAGTGGCAGCGGAGGTGGCGGTGAAATGATGGTTGCTCCTGGAAAAGGAGGAAATGTTTATATCTCGCGAGATGTATTTGAGAGCAATCCTAAAGGTTATTTTGATGATCATCGTGCAGCCAAAAAGGGTGACAAGTAG

Protein sequence

MAGGGQGGRGCGDGSKGGGGGGGRSSKSGGGSEAGGKSGSGGGGEMMVAPGKGGNVYISRDVFESNPKGYFDDHRAAKKGDK

Homology

[Close]

BLAST of Sgr017330 vs. NCBI nr
Match: XP_008465297.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 5.6e-07
Identity = 55/91 (60.44%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 1  MAGGGQGGRGCGDGSKG---GGGGGGRSSKSGGGSEAG------GKSGSGGGGEMMVAPG 60
          MAGGG+ G G G GSK    GGGGGG  S SGGG + G      GK G GGG   MVAPG
Sbjct: 1  MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPG 60

Query: 61 KGGNVYISRDVFESNPKGYFDDHRAAKKGDK 83
           GG V+ISRD FESN +GYF D RAA+KG K
Sbjct: 61 TGGAVHISRDAFESNSRGYFQDFRAAEKGGK 91

[Close]

BLAST of Sgr017330 vs. NCBI nr
Match: KAE8022802.1 (hypothetical protein FH972_008572 [Carpinus fangiana])

HSP 1 Score: 63.5 bits (153), Expect = 9.5e-07
Identity = 47/82 (57.32%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 7  GGRGCGDGSKGGGGGGGRSSKSGGGSEA------GGKSGSGGGGEMMVAPGKGGNVYISR 66
          GG+G GDG KGGGGGGG   K GGG  +      GG S  GG G MMVAPG GG  +ISR
Sbjct: 2  GGKGGGDGGKGGGGGGGGGGKGGGGGVSPKGGGGGGSSKGGGSGGMMVAPGSGGGAHISR 61

Query: 67 DVFESNPKGYFDDHRAAKKGDK 83
          D FESNP+GYF    + +KG K
Sbjct: 62 DTFESNPQGYFSGLHSTEKGTK 83

[Close]

BLAST of Sgr017330 vs. NCBI nr
Match: KAG2289015.1 (hypothetical protein Bca52824_048619 [Brassica carinata])

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 48/80 (60.00%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 3  GGGQGGRGCGDGSKGGGGGGGRSSKSGGGSEAGGKSGSGGGGEMMVAPGKGGNVYISRDV 62
          GGG GG G G G  GGGGGGG     GGG   GGKSG G GG  MVAPG  G+ YISRD 
Sbjct: 18 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKSGGGSGGGYMVAPGSNGSSYISRDN 77

Query: 63 FESNPKGYFDDHRAAKKGDK 83
          FES+PKGYFD+  ++ +G K
Sbjct: 78 FESDPKGYFDNLHSSGQGSK 97

[Close]

BLAST of Sgr017330 vs. NCBI nr
Match: XP_041012809.1 (glycine-rich protein DOT1-like [Juglans microcarpa x Juglans regia])

HSP 1 Score: 61.6 bits (148), Expect = 3.6e-06
Identity = 47/77 (61.04%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 7  GGRGCGDGSKGGGGGGGRSSKSGGGSEAGGKSGSGGGGEMMVAPGKGGNVYISRDVFESN 66
          GG+G G G KGGGGGGG+    GGG   GG S  GG G MMVAPG GG  +ISRD FESN
Sbjct: 2  GGKGGGGGGKGGGGGGGK----GGGGGGGGSSKGGGNGGMMVAPGSGGGAHISRDTFESN 61

Query: 67 PKGYFDD-HRAAKKGDK 83
          P+GYF   H A +KG+K
Sbjct: 62 PQGYFAGLHGAGEKGNK 74

[Close]

BLAST of Sgr017330 vs. NCBI nr
Match: XP_013632659.1 (PREDICTED: glycine-rich cell wall structural protein 1.0 [Brassica oleracea var. oleracea])

HSP 1 Score: 60.8 bits (146), Expect = 6.1e-06
Identity = 49/81 (60.49%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 3   GGGQGGRGCGDGSKGGGGGGGR-SSKSGGGSEAGGKSGSGGGGEMMVAPGKGGNVYISRD 62
           GG  GG G G G KGGGGGGG    +SGGG   GGKSG G GG  MVAPG  G+ YISRD
Sbjct: 65  GGKGGGGGGGGGGKGGGGGGGSGGGRSGGGGGGGGKSGGGSGGGYMVAPGSNGSSYISRD 124

Query: 63  VFESNPKGYFDDHRAAKKGDK 83
            FES+PKGYFD+   + +G K
Sbjct: 125 NFESDPKGYFDNLHGSGQGSK 145

[Close]

BLAST of Sgr017330 vs. ExPASy TrEMBL
Match: A0A1S3CQ14 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103502951 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07
Identity = 55/91 (60.44%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 1  MAGGGQGGRGCGDGSKG---GGGGGGRSSKSGGGSEAG------GKSGSGGGGEMMVAPG 60
          MAGGG+ G G G GSK    GGGGGG  S SGGG + G      GK G GGG   MVAPG
Sbjct: 1  MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPG 60

Query: 61 KGGNVYISRDVFESNPKGYFDDHRAAKKGDK 83
           GG V+ISRD FESN +GYF D RAA+KG K
Sbjct: 61 TGGAVHISRDAFESNSRGYFQDFRAAEKGGK 91

[Close]

BLAST of Sgr017330 vs. ExPASy TrEMBL
Match: A0A5N6R1F8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008572 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.6e-07
Identity = 47/82 (57.32%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 7  GGRGCGDGSKGGGGGGGRSSKSGGGSEA------GGKSGSGGGGEMMVAPGKGGNVYISR 66
          GG+G GDG KGGGGGGG   K GGG  +      GG S  GG G MMVAPG GG  +ISR
Sbjct: 2  GGKGGGDGGKGGGGGGGGGGKGGGGGVSPKGGGGGGSSKGGGSGGMMVAPGSGGGAHISR 61

Query: 67 DVFESNPKGYFDDHRAAKKGDK 83
          D FESNP+GYF    + +KG K
Sbjct: 62 DTFESNPQGYFSGLHSTEKGTK 83

[Close]

BLAST of Sgr017330 vs. ExPASy TrEMBL
Match: A0A0D3BTH2 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06
Identity = 49/81 (60.49%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 3  GGGQGGRGCGDGSKGGGGGGGR-SSKSGGGSEAGGKSGSGGGGEMMVAPGKGGNVYISRD 62
          GG  GG G G G KGGGGGGG    +SGGG   GGKSG G GG  MVAPG  G+ YISRD
Sbjct: 10 GGKGGGGGGGGGGKGGGGGGGSGGGRSGGGGGGGGKSGGGSGGGYMVAPGSNGSSYISRD 69

Query: 63 VFESNPKGYFDDHRAAKKGDK 83
           FES+PKGYFD+   + +G K
Sbjct: 70 NFESDPKGYFDNLHGSGQGSK 90

[Close]

BLAST of Sgr017330 vs. ExPASy TrEMBL
Match: A0A397ZN54 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA04T17856Z PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06
Identity = 48/80 (60.00%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 3  GGGQGGRGCGDGSKGGGGGGGRSSKSGGGSEAGGKSGSGGGGEMMVAPGKGGNVYISRDV 62
          GGG+GG G G    GGGG GG  S  GGG   GGKSG GGGG  MVAPG  G+ YISRD 
Sbjct: 9  GGGKGGGGGGGKGGGGGGSGGGRSGIGGGHGGGGKSGGGGGGGYMVAPGSNGSSYISRDN 68

Query: 63 FESNPKGYFDDHRAAKKGDK 83
          FES+PKGYFD+   + +G K
Sbjct: 69 FESDPKGYFDNLHGSGQGSK 88

[Close]

BLAST of Sgr017330 vs. ExPASy TrEMBL
Match: M4DP66 (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06
Identity = 47/80 (58.75%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 3  GGGQGGRGCGDGSKGGGGGGGRSSKSGGGSEAGGKSGSGGGGEMMVAPGKGGNVYISRDV 62
          GGG GG G G G  GGGGG G     GGG   GGKSG G GG  MVAPG  G+ YISRD 
Sbjct: 13 GGGGGGGGGGKGGGGGGGGSGGGRSGGGGGGGGGKSGGGSGGGYMVAPGSNGSSYISRDN 72

Query: 63 FESNPKGYFDDHRAAKKGDK 83
          FES+PKGYFD+   + +G K
Sbjct: 73 FESDPKGYFDNLHGSGQGSK 92

[Close]

BLAST of Sgr017330 vs. TAIR 10
Match: AT2G30560.1 (glycine-rich protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.0e-07
Identity = 47/82 (57.32%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 1   MAGGGQGGR-GCGDGSKGGGGGGGRSSK--SGGGSEAGGKSGSG-GGGEMMVAPGKGGNV 60
           ++GGG GG+ GCG G  GGGGGGG++     GGG   GGKSG G GGG  MVAPG  G+ 
Sbjct: 90  ISGGGAGGKSGCGGGKSGGGGGGGKNGGGCGGGGGGKGGKSGGGSGGGGYMVAPGSNGSS 149

Query: 61  YISRDVFESNPKGYFDDHRAAK 79
            ISRD FES+ KGYFD+    K
Sbjct: 150 TISRDKFESDTKGYFDNLHGKK 171

[Close]

BLAST of Sgr017330 vs. TAIR 10
Match: AT5G61412.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33145.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 3.3e-05
Identity = 38/69 (55.07%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 17 GGGGGGGRSSKSGGG--SEAGGKSGSGGGGE-MMVAPGKGGNVYISRDVFESNPKGYFDD 76
          GGG  GG   KSGGG  S  GGKSG GG G   MVAPG  G  YISR  FESNP+GYF +
Sbjct: 9  GGGKSGGAGGKSGGGGQSSGGGKSGGGGAGAGNMVAPGTNGGAYISRGGFESNPQGYFSN 68

Query: 77 HRAAKKGDK 83
             + +  K
Sbjct: 69 LHGSGQSKK 77

The following BLAST results are available for this feature:

BLAST of Sgr017330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465297.1	5.6e-07	60.44	PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]	[more]
KAE8022802.1	9.5e-07	57.32	hypothetical protein FH972_008572 [Carpinus fangiana]	[more]
KAG2289015.1	1.6e-06	60.00	hypothetical protein Bca52824_048619 [Brassica carinata]	[more]
XP_041012809.1	3.6e-06	61.04	glycine-rich protein DOT1-like [Juglans microcarpa x Juglans regia]	[more]
XP_013632659.1	6.1e-06	60.49	PREDICTED: glycine-rich cell wall structural protein 1.0 [Brassica oleracea var....	[more]

BLAST of Sgr017330 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr017330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQ14	2.7e-07	60.44	glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5N6R1F8	4.6e-07	57.32	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008572 PE=4 SV=1	[more]
A0A0D3BTH2	3.0e-06	60.49	Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1	[more]
A0A397ZN54	3.9e-06	60.00	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA04T17856Z PE=4 SV=...	[more]
M4DP66	3.9e-06	58.75	Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1	[more]

BLAST of Sgr017330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30560.1	2.0e-07	57.32	glycine-rich protein	[more]
AT5G61412.1	3.3e-05	55.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017330.1	Sgr017330.1	mRNA