Sgr017321 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017321
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	CCHC-type domain-containing protein
Location	tig00153037: 1139105 .. 1139461 (+)
RNA-Seq Expression	Sgr017321
Synteny	Sgr017321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAACGAATGTCGGTTGATTGACCCAGGATATAAAGGTGATAACTTCACTTGGGTAAAAAGCCAATCCTCGAGCAATCCGATATGGGAAAGGTTAGACCGTTACCTTTTGAATTTAGAAATGGCTAACACTAGTTATGACTTTATGGGGCACCTCCTCAAATTCCTCTCTTCTGACCATCGACCTATTCTAGCAACTTGGCACATGAATTTTAAAGACACAAGAAGGAAAAATGGTCAGAGACCTTTACGATTTGAAGAAACGTGCGTTAAATTCGAGGATTGTAGGGAGTTGATTGAAGCAACTTGGATCAACAATAGAGGAAGTGTTATGGCGGGATTTAAAGAAAATTAA

mRNA sequence

ATGATTAACGAATGTCGGTTGATTGACCCAGGATATAAAGGTGATAACTTCACTTGGGTAAAAAGCCAATCCTCGAGCAATCCGATATGGGAAAGGTTAGACCGTTACCTTTTGAATTTAGAAATGGCTAACACTAGTTATGACTTTATGGGGCACCTCCTCAAATTCCTCTCTTCTGACCATCGACCTATTCTAGCAACTTGGCACATGAATTTTAAAGACACAAGAAGGAAAAATGGTCAGAGACCTTTACGATTTGAAGAAACGTGCGTTAAATTCGAGGATTGTAGGGAGTTGATTGAAGCAACTTGGATCAACAATAGAGGAAGTGTTATGGCGGGATTTAAAGAAAATTAA

Coding sequence (CDS)

ATGATTAACGAATGTCGGTTGATTGACCCAGGATATAAAGGTGATAACTTCACTTGGGTAAAAAGCCAATCCTCGAGCAATCCGATATGGGAAAGGTTAGACCGTTACCTTTTGAATTTAGAAATGGCTAACACTAGTTATGACTTTATGGGGCACCTCCTCAAATTCCTCTCTTCTGACCATCGACCTATTCTAGCAACTTGGCACATGAATTTTAAAGACACAAGAAGGAAAAATGGTCAGAGACCTTTACGATTTGAAGAAACGTGCGTTAAATTCGAGGATTGTAGGGAGTTGATTGAAGCAACTTGGATCAACAATAGAGGAAGTGTTATGGCGGGATTTAAAGAAAATTAA

Protein sequence

MINECRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDHRPILATWHMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATWINNRGSVMAGFKEN

Homology

[Close]

BLAST of Sgr017321 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-16
Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 5   CRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDHRPI 64
           C L+DPG+ GD FTW        PIWERLDR+L+N  +           L+FL+SDHRPI
Sbjct: 77  CGLLDPGFVGDIFTWCDGHKYRQPIWERLDRFLINTAIFQIQETLEIRHLEFLASDHRPI 136

Query: 65  LATW-HMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATW 105
           LA W  +      R+ G+RP RFEE    F++C+E++   W
Sbjct: 137 LAEWLGVGEATVGRRKGRRPHRFEEQWFSFQECKEIVRRVW 177

[Close]

BLAST of Sgr017321 vs. NCBI nr
Match: GAU51865.1 (hypothetical protein TSUD_416490 [Trifolium subterraneum])

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-11
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 2   INECRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMG-HLLKFLSSD 61
           +N C L D GYKGD +TW+  Q  +  I ERLDR+L N E      +F   HLL++  SD
Sbjct: 134 LNSCDLQDLGYKGDIYTWINKQQGNQLIKERLDRFLGNSEWMRMFPNFSNTHLLRY-KSD 193

Query: 62  HRPILATWHMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATWINNRGSV 112
           H PIL  ++ +      K   +P R+E+   + E    +++  W  NRGSV
Sbjct: 194 HAPILLDFNTHAAQNNPKRRPKPKRYEQIWTRDESHYHIVKNQWRKNRGSV 243

[Close]

BLAST of Sgr017321 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia])

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-11
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 21  KSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDHRPILATWHMNFKDTRRKNG 80
           +SQ    PIWERLDR+L+N  M N   +     L+ LSSDHRPILA+W          + 
Sbjct: 154 ESQMRGCPIWERLDRFLINESMLNKCLNLKVTHLELLSSDHRPILASWDFELPRAWTCHK 213

Query: 81  QRPLRFEETCVKFEDCRELIEATW 105
           QR +RFEE+ ++ + CR++I  TW
Sbjct: 214 QRKIRFEESWLQIDGCRDIITGTW 237

[Close]

BLAST of Sgr017321 vs. NCBI nr
Match: PNX85343.1 (hypothetical protein L195_g041411 [Trifolium pratense])

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-10
Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 5   CRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDHRPI 64
           C L D GYKGD FTW   Q S + I  RLDR+L N    N    F  + L   SSDH PI
Sbjct: 176 CDLQDLGYKGDIFTWTNKQQSQHLIKARLDRFLANSAWKNLFPVFCNYHLLRYSSDHMPI 235

Query: 65  LATWHMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATWINNRGSVM 113
           L  ++     T ++ G +P+R+E+   +     ++++  W  NRG+ +
Sbjct: 236 LLDFNTFSGPTTKERGPKPIRYEQIWTRDPLHHQIVKDAWQKNRGTTI 283

[Close]

BLAST of Sgr017321 vs. NCBI nr
Match: KAF7810342.1 (reverse transcriptase [Senna tora])

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-10
Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 2   INECRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDH 61
           IN+  LID   KG  FTW  ++ S + +WE+LDR+L N++ A+   + +  ++   +SDH
Sbjct: 808 INQSTLIDIPSKGPLFTWSNNRHSEDLVWEKLDRFLSNIKWADIYLNSLVDVMPIAASDH 867

Query: 62  RPILATWHMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATW 105
            PIL T H N       NG++P  FE   + F+D +  IE  W
Sbjct: 868 APILLTTHPNI-----TNGRKPFYFELMWLDFKDGKATIENAW 905

[Close]

BLAST of Sgr017321 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.4e-17
Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 5   CRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDHRPI 64
           C L+DPG+ GD FTW        PIWERLDR+L+N  +           L+FL+SDHRPI
Sbjct: 77  CGLLDPGFVGDIFTWCDGHKYRQPIWERLDRFLINTAIFQIQETLEIRHLEFLASDHRPI 136

Query: 65  LATW-HMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATW 105
           LA W  +      R+ G+RP RFEE    F++C+E++   W
Sbjct: 137 LAEWLGVGEATVGRRKGRRPHRFEEQWFSFQECKEIVRRVW 177

[Close]

BLAST of Sgr017321 vs. ExPASy TrEMBL
Match: A0A2Z6PLH8 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_416490 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.8e-12
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 2   INECRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMG-HLLKFLSSD 61
           +N C L D GYKGD +TW+  Q  +  I ERLDR+L N E      +F   HLL++  SD
Sbjct: 134 LNSCDLQDLGYKGDIYTWINKQQGNQLIKERLDRFLGNSEWMRMFPNFSNTHLLRY-KSD 193

Query: 62  HRPILATWHMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATWINNRGSV 112
           H PIL  ++ +      K   +P R+E+   + E    +++  W  NRGSV
Sbjct: 194 HAPILLDFNTHAAQNNPKRRPKPKRYEQIWTRDESHYHIVKNQWRKNRGSV 243

[Close]

BLAST of Sgr017321 vs. ExPASy TrEMBL
Match: A0A6J1DUG8 (uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024135 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.0e-11
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 21  KSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDHRPILATWHMNFKDTRRKNG 80
           +SQ    PIWERLDR+L+N  M N   +     L+ LSSDHRPILA+W          + 
Sbjct: 154 ESQMRGCPIWERLDRFLINESMLNKCLNLKVTHLELLSSDHRPILASWDFELPRAWTCHK 213

Query: 81  QRPLRFEETCVKFEDCRELIEATW 105
           QR +RFEE+ ++ + CR++I  TW
Sbjct: 214 QRKIRFEESWLQIDGCRDIITGTW 237

[Close]

BLAST of Sgr017321 vs. ExPASy TrEMBL
Match: A0A2K3M3K2 (Endo/exonuclease/phosphatase domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g041411 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.5e-11
Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 5   CRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDHRPI 64
           C L D GYKGD FTW   Q S + I  RLDR+L N    N    F  + L   SSDH PI
Sbjct: 176 CDLQDLGYKGDIFTWTNKQQSQHLIKARLDRFLANSAWKNLFPVFCNYHLLRYSSDHMPI 235

Query: 65  LATWHMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATWINNRGSVM 113
           L  ++     T ++ G +P+R+E+   +     ++++  W  NRG+ +
Sbjct: 236 LLDFNTFSGPTTKERGPKPIRYEQIWTRDPLHHQIVKDAWQKNRGTTI 283

[Close]

BLAST of Sgr017321 vs. ExPASy TrEMBL
Match: A0A6A3BX96 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00018999pilonHSYRG00010 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09
Identity = 38/116 (32.76%), Postives = 55/116 (47.41%), Query Frame = 0


Query: 3   NECRLIDPGYKGDNFTWVKSQSSSNPIWERLDRYLLNLEMANTSYDFMGHLLKFLSSDHR 62
           N C L+D GY G  FTW +       + ERLDR L N+EM +   +     L  + SDH 
Sbjct: 270 NRCNLMDAGYVGSKFTWTRYLHGRVILQERLDRLLHNMEMVDFFLNLRVVTLTRVYSDHN 329

Query: 63  PILATWHMNFKDTRRKNGQRPLRFEETCVKFEDCRELIEATWINNRGSVMAGFKEN 119
           PIL   ++     + +   RP RFE   +  ED   +    W  N+ S++   +EN
Sbjct: 330 PILINTNLEIPVDKER---RPFRFEAAWLTHEDFNRIFSVAWDKNKESLVDAVEEN 382

The following BLAST results are available for this feature:

BLAST of Sgr017321 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155286.1	1.1e-16	43.56	uncharacterized protein LOC111022423 [Momordica charantia]	[more]
GAU51865.1	1.4e-11	37.84	hypothetical protein TSUD_416490 [Trifolium subterraneum]	[more]
XP_022157437.1	4.1e-11	44.05	uncharacterized protein LOC111024135 [Momordica charantia]	[more]
PNX85343.1	1.6e-10	36.11	hypothetical protein L195_g041411 [Trifolium pratense]	[more]
KAF7810342.1	2.0e-10	36.89	reverse transcriptase [Senna tora]	[more]

BLAST of Sgr017321 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr017321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRA0	5.4e-17	43.56	uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A2Z6PLH8	6.8e-12	37.84	Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_416490 PE=4 SV...	[more]
A0A6J1DUG8	2.0e-11	44.05	uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A2K3M3K2	7.5e-11	36.11	Endo/exonuclease/phosphatase domain-containing protein OS=Trifolium pratense OX=...	[more]
A0A6A3BX96	1.4e-09	32.76	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00018999pilon...	[more]

BLAST of Sgr017321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 3..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017321.1	Sgr017321.1	mRNA