Sgr017284 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr017284
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionThreonine-tRNA ligase
Locationtig00153037: 425588 .. 427500 (+)
RNA-Seq ExpressionSgr017284
SyntenySgr017284
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAACCATTAAGCGGAGGCGGCCCCGATCTGGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCCTCTGAAGCCGAGGTTTGACTGCGAAACCCCTCACTTCCTCTCTCCTCTCACTCAATCTACACGTCCTCCTGATGCTTCGCCACTAATCTTCGTCGCTTAGCTTTTCTTTTTTGGGTGAAATTTACGGCGTTGTTTTAGATGTATATTAATGCGATTGCTAAGGTTTGAAATGCGTGGAAAATGAGCTACTGTGATTGAATTTTGGATTTAGTCCTGGGTTTTGGAAAGGGAGCTTAATTGAAGTTTGTGGCTGTCAAATAGGTACTTGATGATGATGTTGAGTAGGAAGTGCTTTTGATTATGGAAAAAGTGTTTTTGTCCATGCCAAGAGCACTCCAAAGTCCAAACATTGTCTAAGTTTTTTTTATTCATCTCCATGAACTTCTATTGAAATGGAAACCAGGGTCCATTTCTTCTCTTTAATAGATGAAGGAAGGAAGCTGCAGAAAATATTCCAGCCACCAGGCACGTGGTTCGAGATATTGCAGCTTGTTGCTAGTTTCATGTTTTGCAGTCTGAAGTTGAATCCATCTGTATGATGCAGCATGAAGAGGATTATACTTTTGATTCATCTAGGATGCCCCTTCTTTTTTTTTTTTAATTTATTTTTATAACCGTGAGTTTTCGAGTCAGTTTATGCACATCTCAACTAATTTTACAGTACAGCTACCTAACCCTACAACATTTGGTTGTCCATAAGATTTTAATATCCTAGGTAGGTAACCACCATAGGACTTGAACCTTCTATTTTTCAATGCTTGATTCTATCTATCTAGTGTTTTATAATGTGGAGGGGCAATGATGCACATAAATTTGGAGGCTAAATGCAGAGCTAGGCGTTGGTTTGTCCAAGGTTAGGCCTACAAGATATATGTAGAAGTCAAAAACAGTATGTCCAAAAAAAAAACAACTCTTTCAAATAGATTAATGATGCAAAATATTCTTATTTATGAAAGCTTCTCTAAATATAGACCAAAGAAAAATAAGTGGTAGATTTGTTGTCACTTGTAGTTGTAGTCAAGAAGTGGGAGATTTGTTGTCACTTGTAGTCATTAGGCAAATAAGAGGCGAAAGAAGCCTAGAGAAGGATACTGCCTGTGTAAGAAAATGATATATAGAGAAGGTTAAATTACATTTTTAATCATCATGCTTTAACCTTAGTTTTAATTTGGCATCTATGCTTTTAAAAGCTTCAAAGAGTTTGTTGATTTTGGTTTATCTTCCCATTATGCCGTATTCATACTTATGGCAATGAGCTTGTGTATTTCAAGGATCGTTTGTCAAGATTAGAAGCTGCGCTTTTGAGTACGAAAGGTATGTCTCGTGGCTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTGTTTTGGAGAAATCATCCTGTCATAGAGCAAATAAAAGAATATACACAGATAATACCAAAAAAAAAAAAAAAACAAGGAAGGAGCCAAAACAAAAAGGCAACAAATCATACACATGGCTGCTCATTTGAATCACACCAAATCACCAATGGCATGAACATGAATGAATGTCTTTTTCCCACGATATGTTTCTCAATATCGACAGTTCATCCAGATGCCCATAACGAGGAACATCTGAAGACGATAAGCGAACTTCAGTCAAAGCTTGACTGCGCAAATGAATCACTGATTGCAGAACGAAAAAAGGTCAAGTATTTGGAGTACTACGTTGTTGTTTGTGTTTCACCTTGACCAAAAAAACTGGAGATTCTTATTTGGTTATTTTGCAGGCTGAGATGGTTGCTGCAGAAAATGCTAAGCTCCAGTATCGCATAATCCATCTTGTGAGGACAGCAAGGGAAACTCATCAAAAGTTGGAGCAAGCATGA

mRNA sequence

ATGGCGGAACCATTAAGCGGAGGCGGCCCCGATCTGGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCCTCTGAAGCCGAGGATCGTTTGTCAAGATTAGAAGCTGCGCTTTTGAGTACGAAAGTTCATCCAGATGCCCATAACGAGGAACATCTGAAGACGATAAGCGAACTTCAGTCAAAGCTTGACTGCGCAAATGAATCACTGATTGCAGAACGAAAAAAGGCTGAGATGGTTGCTGCAGAAAATGCTAAGCTCCAGTATCGCATAATCCATCTTGTGAGGACAGCAAGGGAAACTCATCAAAAGTTGGAGCAAGCATGA

Coding sequence (CDS)

ATGGCGGAACCATTAAGCGGAGGCGGCCCCGATCTGGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCCTCTGAAGCCGAGGATCGTTTGTCAAGATTAGAAGCTGCGCTTTTGAGTACGAAAGTTCATCCAGATGCCCATAACGAGGAACATCTGAAGACGATAAGCGAACTTCAGTCAAAGCTTGACTGCGCAAATGAATCACTGATTGCAGAACGAAAAAAGGCTGAGATGGTTGCTGCAGAAAATGCTAAGCTCCAGTATCGCATAATCCATCTTGTGAGGACAGCAAGGGAAACTCATCAAAAGTTGGAGCAAGCATGA

Protein sequence

MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQSKLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARETHQKLEQA
Homology
[Close]
BLAST of Sgr017284 vs. NCBI nr
Match: XP_022153876.1 (uncharacterized protein LOC111021288 [Momordica charantia])

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36
Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEPL GGG DLEQ+LKPFFQRASEAEDRLSRLEA LLS K   D  +EEHLKTI+ELQS
Sbjct: 1   MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKK---DTWDEEHLKTIAELQS 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARETHQKLEQ 107
           KLD ANE+LIAERKKAE+VAAENAKLQYRIIHLVRTARE HQKLEQ
Sbjct: 61  KLDSANEALIAERKKAEIVAAENAKLQYRIIHLVRTAREAHQKLEQ 103

[Close]
BLAST of Sgr017284 vs. NCBI nr
Match: XP_022966502.1 (uncharacterized protein LOC111466136 [Cucurbita maxima] >XP_023518486.1 uncharacterized protein LOC111781969 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEPLSGG  DLEQTLKPF+QRASEAEDRLSRLEAALLS K   DAH+EEHLKTISELQS
Sbjct: 1   MAEPLSGGSHDLEQTLKPFYQRASEAEDRLSRLEAALLSKK---DAHDEEHLKTISELQS 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARETH 102
           KLD ANE+LIAE+KKAEMVAAENAKLQYRI+HLVR AR TH
Sbjct: 61  KLDSANEALIAEQKKAEMVAAENAKLQYRILHLVRAARGTH 98

[Close]
BLAST of Sgr017284 vs. NCBI nr
Match: KAG6595681.1 (hypothetical protein SDJN03_12234, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 157.5 bits (397), Expect = 6.3e-35
Identity = 86/101 (85.15%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEPLSGG  DLEQTLKPF++RASEAEDRLSRLEAALLS K   DAH+EEHLKTISELQS
Sbjct: 1   MAEPLSGGSHDLEQTLKPFYRRASEAEDRLSRLEAALLSKK---DAHDEEHLKTISELQS 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARETH 102
           KLD ANE+LIAE+KKAEMVAAENAKLQYRI+HLVR AR TH
Sbjct: 61  KLDSANEALIAEQKKAEMVAAENAKLQYRILHLVRAARGTH 98

[Close]
BLAST of Sgr017284 vs. NCBI nr
Match: XP_022925102.1 (uncharacterized protein LOC111432443 [Cucurbita moschata])

HSP 1 Score: 154.8 bits (390), Expect = 4.1e-34
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEPLSGG  DLEQTLKPF++RASEAEDRLSRLEAALLS K   DAH+EEHLKTISELQS
Sbjct: 1   MAEPLSGGSHDLEQTLKPFYRRASEAEDRLSRLEAALLSKK---DAHDEEHLKTISELQS 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARET 101
           KLD ANE+LIAE+KKAEMVAAENAKLQYRI+HLVR AR T
Sbjct: 61  KLDSANEALIAEQKKAEMVAAENAKLQYRILHLVRAARGT 97

[Close]
BLAST of Sgr017284 vs. NCBI nr
Match: XP_008464609.1 (PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 5.3e-34
Identity = 85/101 (84.16%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEP  GG  DLEQTLKPFFQRAS+AEDRLSRLEAALLS K   D HNEEHLKTISELQ+
Sbjct: 1   MAEPHGGGNHDLEQTLKPFFQRASQAEDRLSRLEAALLSKK---DDHNEEHLKTISELQT 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARETH 102
           KLD AN +LI ERKKAEMVA ENAKLQYRIIHLVRTARETH
Sbjct: 61  KLDSANNALIEERKKAEMVAEENAKLQYRIIHLVRTARETH 98

[Close]
BLAST of Sgr017284 vs. ExPASy TrEMBL
Match: A0A6J1DM00 (uncharacterized protein LOC111021288 OS=Momordica charantia OX=3673 GN=LOC111021288 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.3e-37
Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEPL GGG DLEQ+LKPFFQRASEAEDRLSRLEA LLS K   D  +EEHLKTI+ELQS
Sbjct: 1   MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKK---DTWDEEHLKTIAELQS 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARETHQKLEQ 107
           KLD ANE+LIAERKKAE+VAAENAKLQYRIIHLVRTARE HQKLEQ
Sbjct: 61  KLDSANEALIAERKKAEIVAAENAKLQYRIIHLVRTAREAHQKLEQ 103

[Close]
BLAST of Sgr017284 vs. ExPASy TrEMBL
Match: A0A6J1HN54 (uncharacterized protein LOC111466136 OS=Cucurbita maxima OX=3661 GN=LOC111466136 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEPLSGG  DLEQTLKPF+QRASEAEDRLSRLEAALLS K   DAH+EEHLKTISELQS
Sbjct: 1   MAEPLSGGSHDLEQTLKPFYQRASEAEDRLSRLEAALLSKK---DAHDEEHLKTISELQS 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARETH 102
           KLD ANE+LIAE+KKAEMVAAENAKLQYRI+HLVR AR TH
Sbjct: 61  KLDSANEALIAEQKKAEMVAAENAKLQYRILHLVRAARGTH 98

[Close]
BLAST of Sgr017284 vs. ExPASy TrEMBL
Match: A0A6J1EAW7 (uncharacterized protein LOC111432443 OS=Cucurbita moschata OX=3662 GN=LOC111432443 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.0e-34
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEPLSGG  DLEQTLKPF++RASEAEDRLSRLEAALLS K   DAH+EEHLKTISELQS
Sbjct: 1   MAEPLSGGSHDLEQTLKPFYRRASEAEDRLSRLEAALLSKK---DAHDEEHLKTISELQS 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARET 101
           KLD ANE+LIAE+KKAEMVAAENAKLQYRI+HLVR AR T
Sbjct: 61  KLDSANEALIAEQKKAEMVAAENAKLQYRILHLVRAARGT 97

[Close]
BLAST of Sgr017284 vs. ExPASy TrEMBL
Match: A0A1S3CLW0 (uncharacterized protein LOC103502450 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502450 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.6e-34
Identity = 85/101 (84.16%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 1   MAEPLSGGGPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQS 60
           MAEP  GG  DLEQTLKPFFQRAS+AEDRLSRLEAALLS K   D HNEEHLKTISELQ+
Sbjct: 1   MAEPHGGGNHDLEQTLKPFFQRASQAEDRLSRLEAALLSKK---DDHNEEHLKTISELQT 60

Query: 61  KLDCANESLIAERKKAEMVAAENAKLQYRIIHLVRTARETH 102
           KLD AN +LI ERKKAEMVA ENAKLQYRIIHLVRTARETH
Sbjct: 61  KLDSANNALIEERKKAEMVAEENAKLQYRIIHLVRTARETH 98

[Close]
BLAST of Sgr017284 vs. ExPASy TrEMBL
Match: A0A6P4AJX2 (uncharacterized protein LOC107431605 OS=Ziziphus jujuba OX=326968 GN=LOC107431605 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.3e-22
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 0 

Query: 9   GPDLEQTLKPFFQRASEAEDRLSRLEAALLSTKVHPDAHNEEHLKTISELQSKLDCANES 68
           G DL++TLKPF+QRAS+AEDRLSRLE AL S K   D  N EHLKTI+ELQSKL+ A+  
Sbjct: 7   GNDLQETLKPFYQRASQAEDRLSRLETALASKK---DTGNVEHLKTINELQSKLEDAHAQ 66

Query: 69  LIAERKKAEMVAAENAKLQYRIIHLVRTARETHQKLE 106
           LI+ER++   +AAENAKLQYRI HLVR  RE+ QK+E
Sbjct: 67  LISEREEGRKLAAENAKLQYRIHHLVRAVRESDQKME 100

[Close]
BLAST of Sgr017284 vs. TAIR 10
Match: AT3G57320.1 (unknown protein; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-15
Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 0 

Query: 12  LEQTLKPFFQRASEAEDRLSRLEAALLSTKVH-PDAHNEEHLKTISELQSKLDCANESLI 71
           L + LKPFF RA+EA++RL++LEAAL STK   PDA   E  K   +LQSKL+ AN ++ 
Sbjct: 7   LPENLKPFFHRATEAQERLAKLEAALASTKTDIPDAKLVEENK---QLQSKLEEANATVK 66

Query: 72  AERKKAEMVAAENAKLQYRIIHLVRTARETHQKLEQ 107
            E+ K + +  ENAK +YRI+HLVR  ++  QKLE+
Sbjct: 67  QEQTKVKDLTIENAKHKYRILHLVRALKDADQKLER 99

[Close]
BLAST of Sgr017284 vs. TAIR 10
Match: AT3G57320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 12 LEQTLKPFFQRASEAEDRLSRLEAALLSTKVH-PDAHNEEHLKTISELQSKLDCANESLI 71
          L + LKPFF RA+EA++RL++LEAAL STK   PDA   E  K   +LQSKL+ AN ++ 
Sbjct: 7  LPENLKPFFHRATEAQERLAKLEAALASTKTDIPDAKLVEENK---QLQSKLEEANATVK 66

Query: 72 AERKK 76
           E+ K
Sbjct: 67 QEQTK 68

The following BLAST results are available for this feature:
BLAST of Sgr017284 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153876.11.5e-3684.91uncharacterized protein LOC111021288 [Momordica charantia][more]
XP_022966502.12.2e-3586.14uncharacterized protein LOC111466136 [Cucurbita maxima] >XP_023518486.1 uncharac... [more]
KAG6595681.16.3e-3585.15hypothetical protein SDJN03_12234, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022925102.14.1e-3485.00uncharacterized protein LOC111432443 [Cucurbita moschata][more]
XP_008464609.15.3e-3484.16PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo][more]
BLAST of Sgr017284 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr017284 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DM007.3e-3784.91uncharacterized protein LOC111021288 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1HN541.0e-3586.14uncharacterized protein LOC111466136 OS=Cucurbita maxima OX=3661 GN=LOC111466136... [more]
A0A6J1EAW72.0e-3485.00uncharacterized protein LOC111432443 OS=Cucurbita moschata OX=3662 GN=LOC1114324... [more]
A0A1S3CLW02.6e-3484.16uncharacterized protein LOC103502450 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6P4AJX22.3e-2265.98uncharacterized protein LOC107431605 OS=Ziziphus jujuba OX=326968 GN=LOC10743160... [more]
BLAST of Sgr017284 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G57320.11.6e-1551.04unknown protein; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bac... [more]
AT3G57320.21.6e-0752.31unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..75
NoneNo IPR availablePANTHERPTHR38377THREONINE-TRNA LIGASE 2coord: 11..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr017284.1Sgr017284.1mRNA