Sgr017245 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017245
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153033: 919858 .. 921129 (-)
RNA-Seq Expression	Sgr017245
Synteny	Sgr017245

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCGCCATTTCCGAGCAACCGAGCTGAAGTTGCCAACAATGGCGACTGCTGCGTTTGCTGAAGCTGAAGCTGCGGCCGCCATTGAATGTGATCAAAACCTAAGAAGTTGGCGATGCCATTGGGATGAGTTGAATCTCCAGCTCCTTCATTTGGTGTGGAAATGGCACTGTAATTTAATCTCATTGCTTCTCCTGCTGAAAGCTCTGTAAGTTGATGTAAAAGAAACTGAAATGATTTTTTTTTTCTTCTATAAAGGAATTCATGAGAAAGTTTCCAAGATGATCATTCCATGAGAAATCTTGAATATTTCATTTATCTTTCAAGTCTAACAATGATTTAAAATGGCATCAAAACAAAAGATTCATATTCAAAACCCTATTATGTTATTTACTCAGATCCTTGGTTTATTTTATAGTCTATAAATTAAACTAATACTTCTTTTTAATTTTAAAGTATTCGAATCCATAACTCTAACTCTTTAGTAGAGGTAAAAAAATTTATTCTTGTTTTTAAAAATTATGCTGGTTAGTTAAGAAAATTCTATTTTATTTACGCAAGTTCCACTAAGATTCTAAAAGTTTTTCTAAAAAGTGAAAGTGAAAAACAGGAAATAGAGAGCCTAATGTTTTAAAAAGTAAAAAATTATATAGTCAAAATGGTTATTTAAAAGGGTTAAACTTTTAGATCCAAGCAATAATTTAACATATGAGTTTCATATGATTTTGGTGGCCAAAGTTTTAAGATGATGATAAGAGACAAGTACCAGTAGCTTGGCATTGGGAGCTAACCGGAGACTTTGAGCTACTTTTGCTTCTTTTATTATTCCGGCGGTAGCCGCCGCCGACGGGGACGCTTCTGAGAGCGCCGCCTCTGGTCCAGTAGCGGCGGCAGGTCTTGCAGAAGTGGCGAGGCTGAGAGAGGCTGTAGTTGTTGAAGTAGCAAAACTTTGTGTTTGTGGATTCACATCTTGGGCACTTGAGCGCCGTCTCCGGCACCGGCAGGTTGGCCATCCGAGCTCGATCCGCCATGGACCCAGGCCTGACCGACCCGCCGCCACCACCACAACCACCCCCATGAGTAGTTTGCGGTGGTGGGCGCGGCGGCGATGGATGATGCGACAGGAGCTGAAAACTAGAGGCTCCCATGATACTGCCAGATTGATGGGTTGCTTGCTGCTGCTGAAAATGGTAAGAACAAGAAACATGAAGAACTTTGGAACTCAAAGGAAGAAGAAGAAGAATTCTATTGAACAAACCTGCTGCCATTGA

mRNA sequence

ATGCGTCGCCATTTCCGAGCAACCGAGCTGAAGTTGCCAACAATGGCGACTGCTGCGTTTGCTGAAGCTGAAGCTGCGGCCGCCATTGAATGTGATCAAAACCTAAGAAGTTGGCGATGCCATTGGGATGAGTTGAATCTCCAGCTCCTTCATTTGGTGTGGAAATGGCACTCCGCCGCCGACGGGGACGCTTCTGAGAGCGCCGCCTCTGGTCCAGTAGCGGCGGCAGGTCTTGCAGAAGTGGCGAGGCTGAGAGAGGCTGTAGTTGTTGAAGTAGCAAAACTTTGTGTTTGTGGATTCACATCTTGGGCACTTGAGCGCCGTCTCCGGCACCGGCAGGTTGGCCATCCGAGCTCGATCCGCCATGGACCCAGGCCTGACCGACCCGCCGCCACCACCACAACCACCCCCATGAGTAGTTTGCGGTGGTGGGCGCGGCGGCGATGGATGATGCGACAGGAGCTGAAAACTAGAGGCTCCCATGATACTGCCAGATTGATGGGTTGCTTGCTGCTGCTGAAAATGGTAAGAACAAGAAACATGAAGAACTTTGGAACTCAAAGGAAGAAGAAGAAGAATTCTATTGAACAAACCTGCTGCCATTGA

Coding sequence (CDS)

ATGCGTCGCCATTTCCGAGCAACCGAGCTGAAGTTGCCAACAATGGCGACTGCTGCGTTTGCTGAAGCTGAAGCTGCGGCCGCCATTGAATGTGATCAAAACCTAAGAAGTTGGCGATGCCATTGGGATGAGTTGAATCTCCAGCTCCTTCATTTGGTGTGGAAATGGCACTCCGCCGCCGACGGGGACGCTTCTGAGAGCGCCGCCTCTGGTCCAGTAGCGGCGGCAGGTCTTGCAGAAGTGGCGAGGCTGAGAGAGGCTGTAGTTGTTGAAGTAGCAAAACTTTGTGTTTGTGGATTCACATCTTGGGCACTTGAGCGCCGTCTCCGGCACCGGCAGGTTGGCCATCCGAGCTCGATCCGCCATGGACCCAGGCCTGACCGACCCGCCGCCACCACCACAACCACCCCCATGAGTAGTTTGCGGTGGTGGGCGCGGCGGCGATGGATGATGCGACAGGAGCTGAAAACTAGAGGCTCCCATGATACTGCCAGATTGATGGGTTGCTTGCTGCTGCTGAAAATGGTAAGAACAAGAAACATGAAGAACTTTGGAACTCAAAGGAAGAAGAAGAAGAATTCTATTGAACAAACCTGCTGCCATTGA

Protein sequence

MRRHFRATELKLPTMATAAFAEAEAAAAIECDQNLRSWRCHWDELNLQLLHLVWKWHSAADGDASESAASGPVAAAGLAEVARLREAVVVEVAKLCVCGFTSWALERRLRHRQVGHPSSIRHGPRPDRPAATTTTTPMSSLRWWARRRWMMRQELKTRGSHDTARLMGCLLLLKMVRTRNMKNFGTQRKKKKNSIEQTCCH

Homology

[Close]

BLAST of Sgr017245 vs. NCBI nr
Match: CAG1861709.1 (unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 55.5 bits (132), Expect = 6.3e-04
Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 58  SAADGDASESAASGPVAAAGLAEVARLREAVVVEVAKLCVCGFTSWALERRLRHRQVGHP 117
           + +DGD  E A  GPVA AGLAEV RL + VVVEVAKL +      A +R LR  ++ HP
Sbjct: 52  AGSDGDVPEGAPGGPVAMAGLAEVPRLVDVVVVEVAKLGLLALAPGAWQRLLRLHRLHHP 111

Query: 118 SSIR 122
             +R
Sbjct: 112 GRLR 115

[Close]

BLAST of Sgr017245 vs. ExPASy TrEMBL
Match: A0A0A9J775 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-04
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 81  VARLREAVVVEVAKLCVCGFTSWALERRLRHRQVGHPSSIRHGPRPDRPAATTTT 136
           +ARLRE +VVEVAKL V  F + ALE RLR R +G P  +RHG RP R AA+  T
Sbjct: 1   MARLRERIVVEVAKLGVDRFAARALEPRLRLRYLGDPGPLRHGARPHRRAASRAT 55

[Close]

BLAST of Sgr017245 vs. ExPASy TrEMBL
Match: K3YVC5 (Uncharacterized protein OS=Setaria italica OX=4555 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-04
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 58  SAADGDASESAASGPVAAAGLAEVARLREAVVVEVAKLCVCGFTSWALERRLRHRQVGHP 117
           +AADGD +E AA GPV AA LAEVARLR+ VVV VA+L V G    AL+R  R  +   P
Sbjct: 134 AAADGDVAEDAALGPVPAAALAEVARLRQVVVVVVAELGVGGLAPRALDRLGRRGRRRDP 193

Query: 118 SSIRHG 124
           ++ R G
Sbjct: 194 AAPRPG 199

[Close]

BLAST of Sgr017245 vs. ExPASy TrEMBL
Match: A0A444E291 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00032294 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.2e-04
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 58  SAADGDASESAASGPVAAAGLAEVARLREAVVVEVAKLCVCGFTSWALERRLRHRQVGHP 117
           SAAD + +E AA GPVAAAGLAEVA L E VVV VA+L V G T+ AL+ +LR R+    
Sbjct: 241 SAADRNVAEDAAFGPVAAAGLAEVAGLGEVVVVVVAELGVGGVTAGALDGKLRLRR---- 300

Query: 118 SSIRHGPRPDRPAATTTTT 137
              +    PD P+++++++
Sbjct: 301 --RQRRVAPDAPSSSSSSS 313

The following BLAST results are available for this feature:

BLAST of Sgr017245 vs. NCBI nr


Match Name	E-value	Identity	Description
CAG1861709.1	6.3e-04	50.00	unnamed protein product [Musa acuminata subsp. malaccensis]	[more]

BLAST of Sgr017245 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr017245 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A9J775	1.1e-04	58.18	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]
K3YVC5	1.8e-04	54.55	Uncharacterized protein OS=Setaria italica OX=4555 PE=4 SV=1	[more]
A0A444E291	5.2e-04	48.10	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00032294 PE=4 SV=1	[more]

BLAST of Sgr017245 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017245.1	Sgr017245.1	mRNA