Sgr017075 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017075
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	rRNA 2'-O-methyltransferase fibrillarin 2
Location	tig00153024: 758540 .. 759338 (-)
RNA-Seq Expression	Sgr017075
Synteny	Sgr017075

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGTAGAAGCAAAGATGTCATTGAACCCCACAGACATGAAGGGATTTTCATAGTCAAGGGTAAAGAAGATGCTCTTATCACTGAGAATATAGTCTCTGGTAAATCTGTCTACAACGAGAAGAGGATATCTGTACAGATGATTCATTTCTTACATTAATCTGCCCTTGAAATGTTTGTGCCTGAATGTTGGTTAGTTTTGATCGTACATTTACCCATGCTAAGGGTGACCATGCTTTTTGAAACTTCAATGATAAGTGTTTGATGTATTTATGAGAAATTCTAGTTAGCATTAGCAACAATATCTCATTATCTCCTAATAGTTTTGGGTGGTTCCGACATAGCTAGTTAGTGCTTGTAAATATTTTCAATCCTTATTAAAGGGAATCATTAATGCATGGTCTATTGTTATAACTCCAATGCCTGCAATTTTGGCAAGTATATAGCTTTATGCTTTGCTTGTGTTTGTAAGTTGTTTGAATAGCTAAATGTTTTATATAAACTATCTTCTTTCCAGAATGAAGATGGAACAAAGGTTGAATACAGAGTTTGGAACCCATTCAGGTCAAAGTTGACTGCTGTTATTCTTGGTGGTGTTGATGACATATGGATTGTAAGTGCCTCTGTCATCCAATTTTGATGTTCTAATCTCTTATCTACTTCTCTTTTTAGTATTTCTTTTCTTTTTTCTTTTTAATTTGTTAACATGTATACTGTAGAACCCTGGTGCTCGAGTGTTGTATCTTGGTGCTACTTCAGAAACAACTATATCTCATGTCTTAAATGTTGTTGGCCTT

mRNA sequence

ATGAAAGGTAGAAGCAAAGATGTCATTGAACCCCACAGACATGAAGGGATTTTCATAGTCAAGGGTAAAGAAGATGCTCTTATCACTGAGAATATAGTCTCTGGTAAATCTGTCTACAACGAGAAGAGGATATCTAATGAAGATGGAACAAAGGTTGAATACAGAGTTTGGAACCCATTCAGGTCAAAGTTGACTGCTGTTATTCTTGGTGGTGTTGATGACATATGGATTAACCCTGGTGCTCGAGTGTTGTATCTTGGTGCTACTTCAGAAACAACTATATCTCATGTCTTAAATGTTGTTGGCCTT

Coding sequence (CDS)

ATGAAAGGTAGAAGCAAAGATGTCATTGAACCCCACAGACATGAAGGGATTTTCATAGTCAAGGGTAAAGAAGATGCTCTTATCACTGAGAATATAGTCTCTGGTAAATCTGTCTACAACGAGAAGAGGATATCTAATGAAGATGGAACAAAGGTTGAATACAGAGTTTGGAACCCATTCAGGTCAAAGTTGACTGCTGTTATTCTTGGTGGTGTTGATGACATATGGATTAACCCTGGTGCTCGAGTGTTGTATCTTGGTGCTACTTCAGAAACAACTATATCTCATGTCTTAAATGTTGTTGGCCTT

Protein sequence

MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRISNEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVGL

Homology

[Close]

BLAST of Sgr017075 vs. NCBI nr
Match: XP_038875740.1 (rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK VIEPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWN
Sbjct: 60  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 119

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 120 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 163

[Close]

BLAST of Sgr017075 vs. NCBI nr
Match: XP_022141240.1 (mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK VIEPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 164

[Close]

BLAST of Sgr017075 vs. NCBI nr
Match: KAG6576706.1 (rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK VIEPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWN
Sbjct: 59  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 118

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 119 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 162

[Close]

BLAST of Sgr017075 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.6 bits (444), Expect = 2.2e-40
Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 164

[Close]

BLAST of Sgr017075 vs. NCBI nr
Match: XP_022984980.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima] >KAG7014755.1 Mediator of RNA polymerase II transcription subunit 36a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175.6 bits (444), Expect = 2.2e-40
Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWN
Sbjct: 60  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 119

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 120 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 163

[Close]

BLAST of Sgr017075 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-40
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTKVEYRVWN
Sbjct: 63  MKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWN 122

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV ++VG
Sbjct: 123 PFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVG 166

[Close]

BLAST of Sgr017075 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 6.5e-40
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTK EYRVWN
Sbjct: 74  MKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWN 133

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV ++VG
Sbjct: 134 PFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVG 177

[Close]

BLAST of Sgr017075 vs. ExPASy Swiss-Prot
Match: P35551 (rRNA 2'-O-methyltransferase fibrillarin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fib1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 7.4e-36
Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 2   KGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNP 61
           KG +K +IEPHRH G+FI +GKED L+T N+V G+SVYNEKRIS  + DGTKVEYRVWNP
Sbjct: 68  KGGAKVIIEPHRHAGVFIARGKEDLLVTRNLVPGESVYNEKRISVDSPDGTKVEYRVWNP 127

Query: 62  FRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           FRSKL A ILGG+D+I+I PGARVLYLGA + T++SHV +VVG
Sbjct: 128 FRSKLAAGILGGLDNIYIKPGARVLYLGAANGTSVSHVADVVG 170

[Close]

BLAST of Sgr017075 vs. ExPASy Swiss-Prot
Match: P22232 (rRNA 2'-O-methyltransferase fibrillarin OS=Xenopus laevis OX=8355 GN=fbl PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-34
Identity = 69/98 (70.41%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 6   KDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRISNEDG-TKVEYRVWNPFRSKL 65
           K ++EPHRHEGIFI +GKEDAL+T+N+V G+SVY EKRIS EDG  K EYR WNPFRSK+
Sbjct: 87  KVIVEPHRHEGIFICRGKEDALVTKNLVPGESVYGEKRISVEDGEVKTEYRAWNPFRSKI 146

Query: 66  TAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
            A ILGGVD I I PG +VLYLGA S TT+SHV +VVG
Sbjct: 147 AAAILGGVDQIHIKPGVKVLYLGAASGTTVSHVSDVVG 184

[Close]

BLAST of Sgr017075 vs. ExPASy Swiss-Prot
Match: P22087 (rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens OX=9606 GN=FBL PE=1 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 5.9e-33
Identity = 65/96 (67.71%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 8   VIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRISNEDG-TKVEYRVWNPFRSKLTA 67
           ++EPHRHEG+FI +GKEDAL+T+N+V G+SVY EKR+S  +G  K+EYR WNPFRSKL A
Sbjct: 87  MVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLAA 146

Query: 68  VILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
            ILGGVD I I PGA+VLYLGA S TT+SHV ++VG
Sbjct: 147 AILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVG 182

[Close]

BLAST of Sgr017075 vs. ExPASy TrEMBL
Match: A0A6J1CHH3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charantia OX=3673 GN=LOC111011688 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.0e-41
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK VIEPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 164

[Close]

BLAST of Sgr017075 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40
Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWN
Sbjct: 60  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 119

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 120 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 163

[Close]

BLAST of Sgr017075 vs. ExPASy TrEMBL
Match: A0A6J1HX74 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111467690 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWN 120

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 164

[Close]

BLAST of Sgr017075 vs. ExPASy TrEMBL
Match: A0A0A0KLF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK ++EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWN
Sbjct: 63  MKGGSKVIVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISIQNEDGTKVEYRVWN 122

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 123 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 166

[Close]

BLAST of Sgr017075 vs. ExPASy TrEMBL
Match: A0A6J1G280 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita moschata OX=3662 GN=LOC111449984 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWN 120

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV +VVG
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVG 164

[Close]

BLAST of Sgr017075 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 166.0 bits (419), Expect = 1.6e-41
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTKVEYRVWN
Sbjct: 63  MKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWN 122

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV ++VG
Sbjct: 123 PFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVG 166

[Close]

BLAST of Sgr017075 vs. TAIR 10
Match: AT5G52470.2 (fibrillarin 1 )

HSP 1 Score: 166.0 bits (419), Expect = 1.6e-41
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTKVEYRVWN
Sbjct: 63  MKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWN 122

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV ++VG
Sbjct: 123 PFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVG 166

[Close]

BLAST of Sgr017075 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 164.5 bits (415), Expect = 4.6e-41
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWN 60
           MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTK EYRVWN
Sbjct: 74  MKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWN 133

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           PFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV ++VG
Sbjct: 134 PFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVG 177

[Close]

BLAST of Sgr017075 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-31
Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 1   MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRI--SNEDGTKVEYRVWN 60
           +KG SK ++ PHRH G+F+ K K DAL+T+N+V G+ +YNEKRI   NED + VEYRVWN
Sbjct: 53  IKGGSKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWN 112

Query: 61  PFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG 103
           P RSKL   I  GVD+IWI PG +VLYLGA+S  T+SHV ++VG
Sbjct: 113 PHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVG 156

The following BLAST results are available for this feature:

BLAST of Sgr017075 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875740.1	1.6e-40	82.69	rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida]	[more]
XP_022141240.1	1.6e-40	82.69	mediator of RNA polymerase II transcription subunit 36a-like [Momordica charanti...	[more]
KAG6576706.1	1.6e-40	82.69	rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp...	[more]
XP_023552409.1	2.2e-40	81.73	mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub...	[more]
XP_022984980.1	2.2e-40	81.73	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxi...	[more]

BLAST of Sgr017075 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FEF8	2.2e-40	75.00	rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q94AH9	6.5e-40	74.04	rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
P35551	7.4e-36	69.90	rRNA 2'-O-methyltransferase fibrillarin OS=Schizosaccharomyces pombe (strain 972...	[more]
P22232	7.0e-34	70.41	rRNA 2'-O-methyltransferase fibrillarin OS=Xenopus laevis OX=8355 GN=fbl PE=2 SV...	[more]
P22087	5.9e-33	67.71	rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens OX=9606 GN=FBL PE=1 SV=2	[more]

BLAST of Sgr017075 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHH3	8.0e-41	82.69	mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charan...	[more]
A0A6J1JA27	1.0e-40	81.73	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A6J1HX74	1.4e-40	80.77	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A0A0KLF9	1.4e-40	80.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1	[more]
A0A6J1G280	1.4e-40	80.77	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita mo...	[more]

BLAST of Sgr017075 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52470.1	1.6e-41	75.00	fibrillarin 1	[more]
AT5G52470.2	1.6e-41	75.00	fibrillarin 1	[more]
AT4G25630.1	4.6e-41	74.04	fibrillarin 2	[more]
AT5G52490.1	1.1e-31	59.62	Fibrillarin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	PRINTS	PR00052	FIBRILLARIN	coord: 80..101 score: 60.71 coord: 53..72 score: 72.14 coord: 27..46 score: 53.57
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 9..103 e-value: 5.6E-12 score: 0.0
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 9..102 e-value: 1.6E-33 score: 115.7
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 4..57 e-value: 1.2E-24 score: 87.9
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 58..103 e-value: 6.5E-17 score: 63.6
None	No IPR available	PANTHER	PTHR10335:SF21	BNAA03G47570D PROTEIN	coord: 1..102
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 1..102
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 7..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017075.1	Sgr017075.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000494	box C/D RNA 3'-end processing
biological_process	GO:1990258	histone glutamine methylation
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0051225	spindle assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0031122	cytoplasmic microtubule organization
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000922	spindle pole
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0000930	gamma-tubulin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0000923	equatorial microtubule organizing center
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031428	box C/D RNP complex
molecular_function	GO:0043015	gamma-tubulin binding
molecular_function	GO:1990259	histone-glutamine methyltransferase activity
molecular_function	GO:0051011	microtubule minus-end binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008649	rRNA methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity