Sgr016918 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr016918
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00153016: 525570 .. 525827 (-)
RNA-Seq ExpressionSgr016918
SyntenySgr016918
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCTTCTGTGTATGCATCGGTAAAGCCATGCGTTTTGGTTTTGCCTGTAACTCATCGTCCTTTGCAAGTAAGAGCTCAGAGTTTCAGAGATGAAGGTGACTCTCTCTCTCATATATATATATATATAACAAATCATAATTGTCCAATAATTTACTTTGTCACTGAGCCTTTATTTTCAGCTGGCTATGGTGCAGGAAGGTTCAGTAACATGGTAGATGCCAACTTGGGAGTTTTAAGAGAGAGAATGGAAGAG

mRNA sequence

ATGGTTTCTTCTGTGTATGCATCGGTAAAGCCATGCGTTTTGGTTTTGCCTGTAACTCATCGTCCTTTGCAAGTAAGAGCTCAGAGTTTCAGAGATGAAGCTGGCTATGGTGCAGGAAGGTTCAGTAACATGGTAGATGCCAACTTGGGAGTTTTAAGAGAGAGAATGGAAGAG

Coding sequence (CDS)

ATGGTTTCTTCTGTGTATGCATCGGTAAAGCCATGCGTTTTGGTTTTGCCTGTAACTCATCGTCCTTTGCAAGTAAGAGCTCAGAGTTTCAGAGATGAAGCTGGCTATGGTGCAGGAAGGTTCAGTAACATGGTAGATGCCAACTTGGGAGTTTTAAGAGAGAGAATGGAAGAG

Protein sequence

MVSSVYASVKPCVLVLPVTHRPLQVRAQSFRDEAGYGAGRFSNMVDANLGVLRERMEE
Homology
[Close]
BLAST of Sgr016918 vs. NCBI nr
Match: KAG6579027.1 (hypothetical protein SDJN03_23475, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016550.1 hypothetical protein SDJN02_21659, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 60.8 bits (146), Expect = 4.3e-06
Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 2  VSSVYASV-KPCVLVL-PVTHR-PLQVRAQSFRDEAGY------GAGRFSNMVDANLGVL 59
          VS VYA + KPCV++  PV  R  LQVRAQ FR+E G       GAGR   MVDAN+GVL
Sbjct: 4  VSCVYAPLAKPCVVMAWPVLGRGRLQVRAQCFREEQGESFCDGGGAGRLGKMVDANMGVL 63

[Close]
BLAST of Sgr016918 vs. ExPASy TrEMBL
Match: A0A1R3FV26 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38443 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.8e-04
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0 

Query: 6  YASVKPCVLVLPVTH-RPLQVRAQSFRDEAGYGAGRFSNMVDANLGVLRERMEE 59
          Y  ++PC      T  + LQVRAQSFRD      GR SN VDANLGVLRER+E+
Sbjct: 8  YVIIRPCCFKQYYTRPQALQVRAQSFRDH----EGRSSNSVDANLGVLRERIEQ 57

The following BLAST results are available for this feature:
BLAST of Sgr016918 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579027.14.3e-0660.61hypothetical protein SDJN03_23475, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Sgr016918 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr016918 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1R3FV269.8e-0455.56Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38443 PE=4 SV=1[more]
BLAST of Sgr016918 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr016918.1Sgr016918.1mRNA