Sgr016908 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr016908
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153016: 418911 .. 419132 (-)
RNA-Seq Expression	Sgr016908
Synteny	Sgr016908

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTACTTTCTTGCTGAAGCATACGTAATGAGGAAAATGAACAAGGAGAAATTGAAGAAGATGGAGAAGGAAGAACAAGAAAAGAAGAGGAAGAACGGTTCGAGCATTTGCACTTACGGATCAGTGAAACACTCCAATGGCTCCTCCTGGCTGTCCAGGAAATTGAAAATCCATCCAAGCAATGCTAAAAGCTCCGGTGAACAAATTGAGGCGATCTGA

mRNA sequence

ATGGACTACTTTCTTGCTGAAGCATACGTAATGAGGAAAATGAACAAGGAGAAATTGAAGAAGATGGAGAAGGAAGAACAAGAAAAGAAGAGGAAGAACGGTTCGAGCATTTGCACTTACGGATCAGTGAAACACTCCAATGGCTCCTCCTGGCTGTCCAGGAAATTGAAAATCCATCCAAGCAATGCTAAAAGCTCCGGTGAACAAATTGAGGCGATCTGA

Coding sequence (CDS)

ATGGACTACTTTCTTGCTGAAGCATACGTAATGAGGAAAATGAACAAGGAGAAATTGAAGAAGATGGAGAAGGAAGAACAAGAAAAGAAGAGGAAGAACGGTTCGAGCATTTGCACTTACGGATCAGTGAAACACTCCAATGGCTCCTCCTGGCTGTCCAGGAAATTGAAAATCCATCCAAGCAATGCTAAAAGCTCCGGTGAACAAATTGAGGCGATCTGA

Protein sequence

MDYFLAEAYVMRKMNKEKLKKMEKEEQEKKRKNGSSICTYGSVKHSNGSSWLSRKLKIHPSNAKSSGEQIEAI

Homology

[Close]

BLAST of Sgr016908 vs. NCBI nr
Match: ADN33680.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 56.6 bits (135), Expect = 1.0e-04
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 2  DYFLAEAYVMRKMNKEKLKKMEKEEQEKKRKNGSSICT---YGSVKHSNGSSWLSRKLKI 61
          +Y LAEAYVM KMN+EKLKK E+ E  KK+   +S  +   Y + K   GSSWL RK+KI
Sbjct: 4  NYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKK--QGSSWLLRKMKI 63

Query: 62 HPSNAKSSGEQIE 72
          HPSN  +S   ++
Sbjct: 64 HPSNKANSNNSVK 74

[Close]

BLAST of Sgr016908 vs. ExPASy TrEMBL
Match: E5GB38 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.0e-05
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 2  DYFLAEAYVMRKMNKEKLKKMEKEEQEKKRKNGSSICT---YGSVKHSNGSSWLSRKLKI 61
          +Y LAEAYVM KMN+EKLKK E+ E  KK+   +S  +   Y + K   GSSWL RK+KI
Sbjct: 4  NYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKK--QGSSWLLRKMKI 63

Query: 62 HPSNAKSSGEQIE 72
          HPSN  +S   ++
Sbjct: 64 HPSNKANSNNSVK 74

The following BLAST results are available for this feature:

BLAST of Sgr016908 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33680.1	1.0e-04	50.68	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of Sgr016908 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr016908 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GB38	5.0e-05	50.68	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Sgr016908 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 12..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr016908.1	Sgr016908.1	mRNA