Sgr016620 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr016620
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Patatin
Location	tig00152977: 894889 .. 895291 (+)
RNA-Seq Expression	Sgr016620
Synteny	Sgr016620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTACCACCAACAAGACTCAGATTCTTACCATTGATGGTGGTGGAACTACCGCATTGTAGCCGGCGTCTCCCTCATCTACCTCGGGGACTAGATCTCCATCAAGACCGGTAATCCCCACGCTCGAATCACCGATTTCTTTGACCTCCTTGCTAGCATTGGTATTGGTGCCATTCTCGCCTCCATGCTTGTCACTCATGATGTTTCCGATCAGCCGCTCTTTACCTCTAGGGATGTGGTAGGCTTCATTGCTGAACGAAAATCGAAGATGTTCAAGATTAGGCATGCCACCCATCCCCTCCCTTCTTCTACCTCTAGCGTCATTCTATCTCTTTCTTCTACCTTTGGCGTGATTCTGTCTCTTTCTTCTACCTCTAGCGTCGTTCGTTCCTTTCGCTGA

mRNA sequence

ATGGCTTTACCACCAACAAGACTCAGATTCTTACCATTGATGGTGGTGGAACTACCGCATTGTAGCCGGCGTCTCCCTCATCTACCTCGGGGACTAGATCTCCATCAAGACCGCATTGGTATTGGTGCCATTCTCGCCTCCATGCTTGTCACTCATGATGTTTCCGATCAGCCGCTCTTTACCTCTAGGGATGTGGTAGGCTTCATTGCTGAACGAAAATCGAAGATGTTCAAGATTAGGCATGCCACCCATCCCCTCCCTTCTTCTACCTCTAGCGTCATTCTATCTCTTTCTTCTACCTTTGGCGTGATTCTGTCTCTTTCTTCTACCTCTAGCGTCGTTCGTTCCTTTCGCTGA

Coding sequence (CDS)

ATGGCTTTACCACCAACAAGACTCAGATTCTTACCATTGATGGTGGTGGAACTACCGCATTGTAGCCGGCGTCTCCCTCATCTACCTCGGGGACTAGATCTCCATCAAGACCGCATTGGTATTGGTGCCATTCTCGCCTCCATGCTTGTCACTCATGATGTTTCCGATCAGCCGCTCTTTACCTCTAGGGATGTGGTAGGCTTCATTGCTGAACGAAAATCGAAGATGTTCAAGATTAGGCATGCCACCCATCCCCTCCCTTCTTCTACCTCTAGCGTCATTCTATCTCTTTCTTCTACCTTTGGCGTGATTCTGTCTCTTTCTTCTACCTCTAGCGTCGTTCGTTCCTTTCGCTGA

Protein sequence

MALPPTRLRFLPLMVVELPHCSRRLPHLPRGLDLHQDRIGIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRHATHPLPSSTSSVILSLSSTFGVILSLSSTSSVVRSFR

Homology

[Close]

BLAST of Sgr016620 vs. NCBI nr
Match: XP_022963689.1 (probable inactive patatin-like protein 9 [Cucurbita moschata])

HSP 1 Score: 57.8 bits (138), Expect = 7.5e-05
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRHA 83
           GIGAILASMLV  D   +PLFT++D V F++ERKS+MFK+++A
Sbjct: 76  GIGAILASMLVADDGFGRPLFTAKDAVDFLSERKSEMFKMKNA 118

[Close]

BLAST of Sgr016620 vs. NCBI nr
Match: KAG6571469.1 (putative inactive patatin-like protein 9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011231.1 putative inactive patatin-like protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 57.8 bits (138), Expect = 7.5e-05
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRHA 83
           GIGAILASMLV  D   +PLFT++D V F++ERKS+MFK+++A
Sbjct: 76  GIGAILASMLVADDGFGRPLFTAKDAVDFLSERKSEMFKMKNA 118

[Close]

BLAST of Sgr016620 vs. NCBI nr
Match: XP_006402298.1 (probable inactive patatin-like protein 9 [Eutrema salsugineum] >ESQ43751.1 hypothetical protein EUTSA_v10006027mg [Eutrema salsugineum])

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRH 82
           GIG ILA++LV  D S +P+FT+RD V FIAER S++F+IRH
Sbjct: 80  GIGGILAALLVADDGSGRPMFTARDAVKFIAERNSELFEIRH 121

[Close]

BLAST of Sgr016620 vs. NCBI nr
Match: KAF8048592.1 (hypothetical protein N665_2468s0008 [Sinapis alba])

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-04
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRH 82
           GIG ILA++LV  D S +P+FT+RD V FIAE+ S++F+IRH
Sbjct: 72  GIGGILAALLVADDGSGRPMFTARDAVNFIAEKNSELFEIRH 113

[Close]

BLAST of Sgr016620 vs. NCBI nr
Match: XP_023554711.1 (probable inactive patatin-like protein 9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-04
Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRHA 83
           GIGAILASMLV  D   +PLFT++D V F++ERKS+MF++++A
Sbjct: 76  GIGAILASMLVADDGFGRPLFTAKDAVDFLSERKSEMFRMKNA 118

[Close]

BLAST of Sgr016620 vs. ExPASy Swiss-Prot
Match: Q93ZQ3 (Probable inactive patatin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=PLP9 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.4e-06
Identity = 23/42 (54.76%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRH 82
           GIG ILA++LV  D S +P+FT+RD V F+AE+ S++F+IR+
Sbjct: 78  GIGGILAALLVADDGSGRPMFTARDAVKFVAEKNSELFEIRY 119

[Close]

BLAST of Sgr016620 vs. ExPASy TrEMBL
Match: A0A6J1HKY0 (Patatin OS=Cucurbita moschata OX=3662 GN=LOC111463945 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-05
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRHA 83
           GIGAILASMLV  D   +PLFT++D V F++ERKS+MFK+++A
Sbjct: 76  GIGAILASMLVADDGFGRPLFTAKDAVDFLSERKSEMFKMKNA 118

[Close]

BLAST of Sgr016620 vs. ExPASy TrEMBL
Match: V4NCP0 (Patatin OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006027mg PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.2e-05
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRH 82
           GIG ILA++LV  D S +P+FT+RD V FIAER S++F+IRH
Sbjct: 80  GIGGILAALLVADDGSGRPMFTARDAVKFIAERNSELFEIRH 121

[Close]

BLAST of Sgr016620 vs. ExPASy TrEMBL
Match: A0A397Y2G7 (Patatin OS=Brassica campestris OX=3711 GN=BRARA_I04375 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.1e-04
Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRH 82
           GIG ILA++LV  D S +P+FT+RD V FI+E+ S++F+IRH
Sbjct: 72  GIGGILAALLVADDGSGKPMFTARDAVRFISEKNSELFEIRH 113

[Close]

BLAST of Sgr016620 vs. ExPASy TrEMBL
Match: A0A3P6FZU6 (Patatin OS=Brassica oleracea OX=3712 GN=BOLC8T51369H PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.1e-04
Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRH 82
           GIG ILA++LV  D S +P+FT+RD V FI+E+ S++F+IRH
Sbjct: 72  GIGGILAALLVADDGSGKPMFTARDAVRFISEKNSELFEIRH 113

[Close]

BLAST of Sgr016620 vs. ExPASy TrEMBL
Match: M4CU41 (Patatin OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.1e-04
Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRH 82
           GIG ILA++LV  D S +P+FT+RD V FI+E+ S++F+IRH
Sbjct: 72  GIGGILAALLVADDGSGKPMFTARDTVRFISEKNSELFEIRH 113

[Close]

BLAST of Sgr016620 vs. TAIR 10
Match: AT3G63200.1 (PATATIN-like protein 9 )

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07
Identity = 23/42 (54.76%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 40  GIGAILASMLVTHDVSDQPLFTSRDVVGFIAERKSKMFKIRH 82
           GIG ILA++LV  D S +P+FT+RD V F+AE+ S++F+IR+
Sbjct: 78  GIGGILAALLVADDGSGRPMFTARDAVKFVAEKNSELFEIRY 119

The following BLAST results are available for this feature:

BLAST of Sgr016620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963689.1	7.5e-05	62.79	probable inactive patatin-like protein 9 [Cucurbita moschata]	[more]
KAG6571469.1	7.5e-05	62.79	putative inactive patatin-like protein 9, partial [Cucurbita argyrosperma subsp....	[more]
XP_006402298.1	1.3e-04	61.90	probable inactive patatin-like protein 9 [Eutrema salsugineum] >ESQ43751.1 hypot...	[more]
KAF8048592.1	1.7e-04	59.52	hypothetical protein N665_2468s0008 [Sinapis alba]	[more]
XP_023554711.1	1.7e-04	60.47	probable inactive patatin-like protein 9 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sgr016620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZQ3	2.4e-06	54.76	Probable inactive patatin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=PLP9...	[more]

BLAST of Sgr016620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKY0	3.6e-05	62.79	Patatin OS=Cucurbita moschata OX=3662 GN=LOC111463945 PE=3 SV=1	[more]
V4NCP0	6.2e-05	61.90	Patatin OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006027mg PE=3 SV=1	[more]
A0A397Y2G7	3.1e-04	57.14	Patatin OS=Brassica campestris OX=3711 GN=BRARA_I04375 PE=3 SV=1	[more]
A0A3P6FZU6	3.1e-04	57.14	Patatin OS=Brassica oleracea OX=3712 GN=BOLC8T51369H PE=3 SV=1	[more]
M4CU41	3.1e-04	57.14	Patatin OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1	[more]

BLAST of Sgr016620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63200.1	1.7e-07	54.76	PATATIN-like protein 9	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr016620.1	Sgr016620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016042	lipid catabolic process
molecular_function	GO:0016298	lipase activity