Sgr016619 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr016619
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionMucin-1
Locationtig00152977: 892311 .. 892712 (+)
RNA-Seq ExpressionSgr016619
SyntenySgr016619
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTCAATCTGTTGTTGTTCTTGCTCTGTTCTTCGTCGCCGTCGCCGGCGTTGTTGCTCAGGGTCCGACTAGCTCTCCCACGGCGTCTCCTGCGCCGAAGAGCTCGCCTTCTGGTTCTGCCTCGTCTTCTCCTTCAGCTTCATCGGAGTCGTCGTCTCCCTCGGCTTCAGCTTCTGCTCCGGCGAGCTCCTCCCCTTCCAGTATGACTACTCCTTATCCGGTGAGCGAGACTCCGGCCGGTTTTCCTTCCGCCGACAGTCCTGGCAGCGCCTCGCCTGAGTCCTCCGTCGCATCTCCCCCTGACGCCGCGGCTGGCCCCTTTAGAAGAATGCAATTAAGTGTGGGGAGTTTGTTTCGTAAATTCTCCAGAAGAATGCATGGGCAAGTGCATGGATAA

mRNA sequence

ATGGCTCGTCAATCTGTTGTTGTTCTTGCTCTGTTCTTCGTCGCCGTCGCCGGCGTTGTTGCTCAGGGTCCGACTAGCTCTCCCACGGCGTCTCCTGCGCCGAAGAGCTCGCCTTCTGGTTCTGCCTCGTCTTCTCCTTCAGCTTCATCGGAGTCGTCGTCTCCCTCGGCTTCAGCTTCTGCTCCGGCGAGCTCCTCCCCTTCCAGTATGACTACTCCTTATCCGGTGAGCGAGACTCCGGCCGGTTTTCCTTCCGCCGACAGTCCTGGCAGCGCCTCGCCTGAGTCCTCCGTCGCATCTCCCCCTGACGCCGCGGCTGGCCCCTTTAGAAGAATGCAATTAAGTGTGGGGAGTTTGTTTCGTAAATTCTCCAGAAGAATGCATGGGCAAGTGCATGGATAA

Coding sequence (CDS)

ATGGCTCGTCAATCTGTTGTTGTTCTTGCTCTGTTCTTCGTCGCCGTCGCCGGCGTTGTTGCTCAGGGTCCGACTAGCTCTCCCACGGCGTCTCCTGCGCCGAAGAGCTCGCCTTCTGGTTCTGCCTCGTCTTCTCCTTCAGCTTCATCGGAGTCGTCGTCTCCCTCGGCTTCAGCTTCTGCTCCGGCGAGCTCCTCCCCTTCCAGTATGACTACTCCTTATCCGGTGAGCGAGACTCCGGCCGGTTTTCCTTCCGCCGACAGTCCTGGCAGCGCCTCGCCTGAGTCCTCCGTCGCATCTCCCCCTGACGCCGCGGCTGGCCCCTTTAGAAGAATGCAATTAAGTGTGGGGAGTTTGTTTCGTAAATTCTCCAGAAGAATGCATGGGCAAGTGCATGGATAA

Protein sequence

MARQSVVVLALFFVAVAGVVAQGPTSSPTASPAPKSSPSGSASSSPSASSESSSPSASASAPASSSPSSMTTPYPVSETPAGFPSADSPGSASPESSVASPPDAAAGPFRRMQLSVGSLFRKFSRRMHGQVHG
Homology
BLAST of Sgr016619 vs. NCBI nr
Match: KAA0066977.1 (mucin-1 [Cucumis melo var. makuwa] >TYK20871.1 mucin-1 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-06
Identity = 67/142 (47.18%), Postives = 86/142 (60.56%), Query Frame = 0

Query: 1   MARQSVVVLALFFV-AVAGVVAQGPTSSPTASPAPKSSPSGSASSSPSASSESSSPSASA 60
           MA QSV+V AL FV AVAGV A+ PT SP+ SP+PK+SPS S S SPS+SS ++SP AS+
Sbjct: 1   MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60

Query: 61  SA----PASSSPSSMT-------------------TPYPVSETPAGFPSADSPG------ 109
            A    PA+SSPSS +                   +P P +++PA  P+ADSP       
Sbjct: 61  EATSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120

BLAST of Sgr016619 vs. NCBI nr
Match: XP_008450043.1 (PREDICTED: mucin-1 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 4.5e-06
Identity = 67/142 (47.18%), Postives = 86/142 (60.56%), Query Frame = 0

Query: 1   MARQSVVVLALFFV-AVAGVVAQGPTSSPTASPAPKSSPSGSASSSPS---------ASS 60
           MA QSV+V AL FV AVAGV A+ PT SP+ SP+PK+SPS S S SPS         ASS
Sbjct: 1   MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60

Query: 61  ESSSPSASASAPASSSPSSMT--------------TPYPVSETPAGFPSADSPG------ 109
           E++SPS +AS+P+SSS  + T              +P P +++PA  P+ADSP       
Sbjct: 61  ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120

BLAST of Sgr016619 vs. NCBI nr
Match: XP_031737954.1 (classical arabinogalactan protein 11 [Cucumis sativus] >KAE8650788.1 hypothetical protein Csa_017502 [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-04
Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 0

Query: 1   MARQSVVVLALFFV-AVAGVVAQGPTSSPTASPAPKSSPSGSASSSPSASS--------- 60
           MA Q+V+V AL F+ AVAGV A+ PT SP+ SP+PK+SPS S S SPS+SS         
Sbjct: 1   MASQTVLVFALIFLAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAGSPKASP 60

Query: 61  -------ESSSPSASASAPASSSPSSMTT------PYPVSETPAGFPSADSPGSASPESS 107
                   +SSPS+S+ AP S+SP+S  T      P P +++P+  P++DSP + SP  S
Sbjct: 61  ETTSPSPAASSPSSSSDAPTSNSPTSSPTSSPSVSPSPATDSPSDSPASDSPVADSPADS 120

BLAST of Sgr016619 vs. ExPASy TrEMBL
Match: A0A5A7VIK3 (Mucin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11681G00010 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.7e-07
Identity = 67/142 (47.18%), Postives = 86/142 (60.56%), Query Frame = 0

Query: 1   MARQSVVVLALFFV-AVAGVVAQGPTSSPTASPAPKSSPSGSASSSPSASSESSSPSASA 60
           MA QSV+V AL FV AVAGV A+ PT SP+ SP+PK+SPS S S SPS+SS ++SP AS+
Sbjct: 1   MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60

Query: 61  SA----PASSSPSSMT-------------------TPYPVSETPAGFPSADSPG------ 109
            A    PA+SSPSS +                   +P P +++PA  P+ADSP       
Sbjct: 61  EATSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120

BLAST of Sgr016619 vs. ExPASy TrEMBL
Match: A0A1S3BND1 (mucin-1 OS=Cucumis melo OX=3656 GN=LOC103491750 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-06
Identity = 67/142 (47.18%), Postives = 86/142 (60.56%), Query Frame = 0

Query: 1   MARQSVVVLALFFV-AVAGVVAQGPTSSPTASPAPKSSPSGSASSSPS---------ASS 60
           MA QSV+V AL FV AVAGV A+ PT SP+ SP+PK+SPS S S SPS         ASS
Sbjct: 1   MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60

Query: 61  ESSSPSASASAPASSSPSSMT--------------TPYPVSETPAGFPSADSPG------ 109
           E++SPS +AS+P+SSS  + T              +P P +++PA  P+ADSP       
Sbjct: 61  ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120

BLAST of Sgr016619 vs. ExPASy TrEMBL
Match: A0A0A0LDP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G593190 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.1e-05
Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 0

Query: 1   MARQSVVVLALFFV-AVAGVVAQGPTSSPTASPAPKSSPSGSASSSPSASS--------- 60
           MA Q+V+V AL F+ AVAGV A+ PT SP+ SP+PK+SPS S S SPS+SS         
Sbjct: 1   MASQTVLVFALIFLAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAGSPKASP 60

Query: 61  -------ESSSPSASASAPASSSPSSMTT------PYPVSETPAGFPSADSPGSASPESS 107
                   +SSPS+S+ AP S+SP+S  T      P P +++P+  P++DSP + SP  S
Sbjct: 61  ETTSPSPAASSPSSSSDAPTSNSPTSSPTSSPSVSPSPATDSPSDSPASDSPVADSPADS 120

BLAST of Sgr016619 vs. ExPASy TrEMBL
Match: A0A5N6QV93 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007309 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.9e-04
Identity = 59/113 (52.21%), Postives = 75/113 (66.37%), Query Frame = 0

Query: 1   MARQSVVVLALFFVAVAGVVA---QGPTSSPTASPAPKSSPSGSASSSP-------SASS 60
           MA Q VVVLAL FVA+AGV A   Q PTS+PTASP PKSSP+  +SSSP       ++S 
Sbjct: 1   MAHQ-VVVLALIFVAIAGVAAAEVQAPTSTPTASPTPKSSPTPPSSSSPASAPQSSASSP 60

Query: 61  ESSSPSASASAPASSSP-SSMTTPYPVSETPAGFPSADSPGSASPESSVASPP 103
           ++S+P +SAS+P +S P  S T+P     TPA  P+ DS  + SP S V+SPP
Sbjct: 61  QASTPQSSASSPTASPPKGSATSPTAPPTTPAATPTDDS--APSPGSEVSSPP 110

BLAST of Sgr016619 vs. ExPASy TrEMBL
Match: A0A2N9EVL9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10719 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.7e-04
Identity = 66/127 (51.97%), Postives = 78/127 (61.42%), Query Frame = 0

Query: 1   MARQSVVVLALFFVAVAGVVA--QGPTSSPTASPAPKSSPSGSASSSPSAS-----SESS 60
           MARQ +VVLAL FVAVAG+VA  Q PTSSPTASP PKSSP+ + SSSP AS     S +S
Sbjct: 1   MARQ-LVVLALIFVAVAGLVAADQAPTSSPTASPTPKSSPT-TPSSSPKASASAPKSSAS 60

Query: 61  SPSASASAPASSSPSSMTTPYPV-------------SETPAGFPSAD-----SPGSASPE 103
           +P  SASAP +SS SS T   P              S TPA  P+ D     S  ++SP+
Sbjct: 61  APHGSASAPKASSSSSPTASTPAATPKASASSPTSSSSTPAASPADDDSSDSSTPASSPD 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0066977.12.0e-0647.18mucin-1 [Cucumis melo var. makuwa] >TYK20871.1 mucin-1 [Cucumis melo var. makuwa... [more]
XP_008450043.14.5e-0647.18PREDICTED: mucin-1 [Cucumis melo][more]
XP_031737954.11.9e-0444.96classical arabinogalactan protein 11 [Cucumis sativus] >KAE8650788.1 hypothetica... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VIK39.7e-0747.18Mucin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11681G00010 PE=4... [more]
A0A1S3BND12.2e-0647.18mucin-1 OS=Cucumis melo OX=3656 GN=LOC103491750 PE=4 SV=1[more]
A0A0A0LDP49.1e-0544.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G593190 PE=4 SV=1[more]
A0A5N6QV935.9e-0452.21Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007309 PE=4 SV=1[more]
A0A2N9EVL97.7e-0451.97Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10719 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr016619.1Sgr016619.1mRNA