Sgr016419 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr016419
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	chloride conductance regulatory protein ICln
Location	tig00152909: 780687 .. 781187 (+)
RNA-Seq Expression	Sgr016419
Synteny	Sgr016419

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCAGGACTGAGGCCATACTCGGAGAGAATCGGTGAAGGCTTGGGATTACCTCCCTTCGACGCAGACCATGGCGAGTTACTCATGAACGTCGTGCCCAGCACCGCCATCGTATTTGATAATCGGCCTCCCGAGTCCCCTGGCACCCTCTACGTCTCTACCAAGTACCTCCTTTCATTCTCTCTCTCCGCTTTCCTTCCTTTTGTTCGATAATGTCTGTTTTAGAGTGTCATCCTCTAATACCTGGGGGAAACTGAAAAAATTTAGGGACTGGGATCTCTTTTGCGTGGGATGCATGTAAGTTTTTAAATTGATTTTCGGTTAGGCGAAGGCATGGGTATGGAAATATTCCATTCTTGAAAATGTAGCGTTTCTGAATCTTGGGATGAAATGATTACTTGTGAGCATTTGATTGCTGATGCGAGTATGAGAAAGAAAAATGCCAGTGATTTTCTTAGTTTAGAGGATGGGAAGAAGCCCTCTAAAGATAGAAGATAA

mRNA sequence

ATGGTTTCAGGACTGAGGCCATACTCGGAGAGAATCGGTGAAGGCTTGGGATTACCTCCCTTCGACGCAGACCATGGCGAGTTACTCATGAACGTCGTGCCCAGCACCGCCATCGTATTTGATAATCGGCCTCCCGAGTCCCCTGGCACCCTCTACGTCTCTACCAACGTTTCTGAATCTTGGGATGAAATGATTACTTGTGAGCATTTGATTGCTGATGCGAGTATGAGAAAGAAAAATGCCAGTGATTTTCTTAGTTTAGAGGATGGGAAGAAGCCCTCTAAAGATAGAAGATAA

Coding sequence (CDS)

ATGGTTTCAGGACTGAGGCCATACTCGGAGAGAATCGGTGAAGGCTTGGGATTACCTCCCTTCGACGCAGACCATGGCGAGTTACTCATGAACGTCGTGCCCAGCACCGCCATCGTATTTGATAATCGGCCTCCCGAGTCCCCTGGCACCCTCTACGTCTCTACCAACGTTTCTGAATCTTGGGATGAAATGATTACTTGTGAGCATTTGATTGCTGATGCGAGTATGAGAAAGAAAAATGCCAGTGATTTTCTTAGTTTAGAGGATGGGAAGAAGCCCTCTAAAGATAGAAGATAA

Protein sequence

MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSESWDEMITCEHLIADASMRKKNASDFLSLEDGKKPSKDRR

Homology

[Close]

BLAST of Sgr016419 vs. NCBI nr
Match: XP_023533954.1 (chloride conductance regulatory protein ICln [Cucurbita pepo subsp. pepo])

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-15
Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 4  GLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSESWDE 63
          GLRPY+ER GEGLGLP FDA  GE+L++ VP+ AIVFDNRPPE PGTLYVS++    W  
Sbjct: 4  GLRPYTERTGEGLGLPVFDASQGEVLIHTVPAVAIVFDNRPPEFPGTLYVSSS-QVVW-- 63

Query: 64 MITCEHLIADASMRKKNASDFLSL 88
                 ++D  M K  A DFLS+
Sbjct: 64 -------LSDVDMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. NCBI nr
Match: XP_008467269.1 (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 3.0e-15
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          M  GLR Y+ER G GLGLP FD D GE+LM+V+P+  IVFDNRPPE PGTLYVS+     
Sbjct: 1  MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSR-QVV 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++DA+M K  A DFLS+
Sbjct: 61 W---------LSDANMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. NCBI nr
Match: KAA0055130.1 (chloride conductance regulatory protein ICln isoform X1 [Cucumis melo var. makuwa] >TYK20729.1 chloride conductance regulatory protein ICln isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 3.0e-15
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          M  GLR Y+ER G GLGLP FD D GE+LM+V+P+  IVFDNRPPE PGTLYVS+     
Sbjct: 1  MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSR-QVV 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++DA+M K  A DFLS+
Sbjct: 61 W---------LSDANMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. NCBI nr
Match: XP_008467268.1 (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 3.0e-15
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          M  GLR Y+ER G GLGLP FD D GE+LM+V+P+  IVFDNRPPE PGTLYVS+     
Sbjct: 1  MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSR-QVV 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++DA+M K  A DFLS+
Sbjct: 61 W---------LSDANMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. NCBI nr
Match: XP_038906602.1 (chloride conductance regulatory protein ICln [Benincasa hispida])

HSP 1 Score: 91.7 bits (226), Expect = 3.9e-15
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          M  GLRPY+ER G GLGLP FD + GE+LM+++P+  IVFDNRPPE PGTLY+S+     
Sbjct: 1  MTMGLRPYTERTGHGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSR-QVV 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++D  M K  A DFLS+
Sbjct: 61 W---------LSDVDMEKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. ExPASy Swiss-Prot
Match: Q9LVA7 (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana OX=3702 GN=At5g62290 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          MV+GLR ++ R  +G G P  D  +GE LM+V  S A+   NRP ESPGTLY+ T+    
Sbjct: 1  MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYI-TSRKLI 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++D  M K  A DFLS+
Sbjct: 61 W---------LSDVDMAKGYAVDFLSI 77

[Close]

BLAST of Sgr016419 vs. ExPASy TrEMBL
Match: A0A5D3DBS0 (Chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001310 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          M  GLR Y+ER G GLGLP FD D GE+LM+V+P+  IVFDNRPPE PGTLYVS+     
Sbjct: 1  MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSR-QVV 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++DA+M K  A DFLS+
Sbjct: 61 W---------LSDANMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. ExPASy TrEMBL
Match: A0A1S3CUF8 (chloride conductance regulatory protein ICln isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504664 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          M  GLR Y+ER G GLGLP FD D GE+LM+V+P+  IVFDNRPPE PGTLYVS+     
Sbjct: 1  MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSR-QVV 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++DA+M K  A DFLS+
Sbjct: 61 W---------LSDANMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. ExPASy TrEMBL
Match: A0A1S3CTC6 (chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504664 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          M  GLR Y+ER G GLGLP FD D GE+LM+V+P+  IVFDNRPPE PGTLYVS+     
Sbjct: 1  MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSR-QVV 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++DA+M K  A DFLS+
Sbjct: 61 W---------LSDANMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. ExPASy TrEMBL
Match: A0A0A0KPP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171150 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.3e-15
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          M  GLRPY++R G GLG P FD D GE+LM+V+P+  IVFDNRPPE PGTLY+S+     
Sbjct: 1  MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSR-QVV 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++D  M K  A DFLS+
Sbjct: 61 W---------LSDVIMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. ExPASy TrEMBL
Match: A0A6J1H3I6 (chloride conductance regulatory protein ICln OS=Cucurbita moschata OX=3662 GN=LOC111459687 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 46/84 (54.76%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 4  GLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSESWDE 63
          GLR ++ER G+GLGLP FDA  GE+LM+ VP+ AIVFDNRPPE PGTLYVS++    W  
Sbjct: 4  GLRAFTERTGDGLGLPVFDASQGEVLMHTVPAVAIVFDNRPPEFPGTLYVSSS-QVVW-- 63

Query: 64 MITCEHLIADASMRKKNASDFLSL 88
                 ++D  M K  A DFLS+
Sbjct: 64 -------LSDVDMAKGYAVDFLSM 77

[Close]

BLAST of Sgr016419 vs. TAIR 10
Match: AT5G62290.1 (nucleotide-sensitive chloride conductance regulator (ICln) family protein )

HSP 1 Score: 63.9 bits (154), Expect = 8.1e-11
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          MV+GLR ++ R  +G G P  D  +GE LM+V  S A+   NRP ESPGTLY+ T+    
Sbjct: 1  MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYI-TSRKLI 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++D  M K  A DFLS+
Sbjct: 61 W---------LSDVDMAKGYAVDFLSI 77

[Close]

BLAST of Sgr016419 vs. TAIR 10
Match: AT5G62290.2 (nucleotide-sensitive chloride conductance regulator (ICln) family protein )

HSP 1 Score: 63.9 bits (154), Expect = 8.1e-11
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 1  MVSGLRPYSERIGEGLGLPPFDADHGELLMNVVPSTAIVFDNRPPESPGTLYVSTNVSES 60
          MV+GLR ++ R  +G G P  D  +GE LM+V  S A+   NRP ESPGTLY+ T+    
Sbjct: 1  MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYI-TSRKLI 60

Query: 61 WDEMITCEHLIADASMRKKNASDFLSL 88
          W         ++D  M K  A DFLS+
Sbjct: 61 W---------LSDVDMAKGYAVDFLSI 77

The following BLAST results are available for this feature:

BLAST of Sgr016419 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533954.1	1.7e-15	57.14	chloride conductance regulatory protein ICln [Cucurbita pepo subsp. pepo]	[more]
XP_008467269.1	3.0e-15	55.17	PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo...	[more]
KAA0055130.1	3.0e-15	55.17	chloride conductance regulatory protein ICln isoform X1 [Cucumis melo var. makuw...	[more]
XP_008467268.1	3.0e-15	55.17	PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo...	[more]
XP_038906602.1	3.9e-15	51.72	chloride conductance regulatory protein ICln [Benincasa hispida]	[more]

BLAST of Sgr016419 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVA7	1.1e-09	42.53	Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Sgr016419 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DBS0	1.4e-15	55.17	Chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo var. mak...	[more]
A0A1S3CUF8	1.4e-15	55.17	chloride conductance regulatory protein ICln isoform X2 OS=Cucumis melo OX=3656 ...	[more]
A0A1S3CTC6	1.4e-15	55.17	chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KPP2	9.3e-15	51.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171150 PE=3 SV=1	[more]
A0A6J1H3I6	1.6e-14	54.76	chloride conductance regulatory protein ICln OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sgr016419 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62290.1	8.1e-11	42.53	nucleotide-sensitive chloride conductance regulator (ICln) family protein	[more]
AT5G62290.2	8.1e-11	42.53	nucleotide-sensitive chloride conductance regulator (ICln) family protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr016419.1	Sgr016419.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0032991	protein-containing complex