Sgr016030 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr016030
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	U11/U12 small nuclear ribonucleoprotein 59 kDa protein
Location	tig00006406: 885072 .. 896610 (-)
RNA-Seq Expression	Sgr016030
Synteny	Sgr016030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTGCAAACAACTTATGGATGACTCCCGACCTCTAGCAGTTGAGAGCTTTTCTACCAGTTGGCTGTCAAATGTGAAGCAGTCCTGTGATGCCGCATCCAAAATGATGGATTACAAGATTGTAAAGCCTTCAAGGTTTCTGGATGAAACCCAGAACTTCAAATTCAATACTCTAATCCATCCATCTGTTCTCATAGCCCATGCTGATGAACTTTTCTTTGATGGCTCTATCAGACCCGTTTATGTAAGCCACGCAACATTGGGGGTCTCTAATACATCTGATTTTGTTCCAGTCAAGCACAATTCTTCACTTACTTCTTTAACTTCTAGTCCAGCCACACGAAACCGATCTTGTCATTCTGGAAGATGGAGACGATCCTTATGTACGTTACAGAAGTCTTTAGGATGTCTCAGTCCCATATGCCATAAAGTAGACCCAGGTGAAAGTACCTCGGTTGATGTTAAGAGTCAGCACCATTCCCCTCGAGTATCTCCACAAAGAAAGATTGGTCCTTCATCAGGTGATTGGTGTCATTTAGAGAGCTCAATTTATGAAGCAATACTTCACTGCAAAAAATCTATAGGTGTGTTACATGTGTCTTTCTTTTATGGTAGGTTAATTTCCAGTTCTTCACCACATAGTTTTTTCATTCTCTTCTTGTTTTAGGGGAATGATATCCTGGACCAAAAGAAAAGGGCAATGGAAGGATAAAATACCAGACTTCTGGAAGGGTTCCAGCATGGCAACTTGTTCTTTGTCCCTTTTTTTTTTCTGGCAATATCCCTTTTCACTTCATTTTCCAAGGAGAAATTATATTTTGTCGATCCTGAGAGGATGAAAGACTAGTATAGGATCATAGATGTGTTACTAAACAAAGTATCTTATGCATCCGATGTAATTATGATGTTCTACCTTGTTTGATATGCTGTATACTGTGAGGAGTGAGAGAAACGAGTCTTTATTCAATAAAAAACAGGGCATCTGTTTTATACAGATTACAAATAGGAAGAAGAGAATGCGTTTTTATTCAGCATTGTGCGCTTTCAGATGCACACATCTAAGTTTTCTGATTGTAATGGAAAATTCTCATTTACTTTGATTTGCGACATAATTCATTGGACATTCAGATTGTTGTAGCAGTTGGATTTATTCTTCACATATCCACGTCAGTTCTTCGACCTTTATAAAATGAAAATGCAATGAGGTAGTCTATTGCATTCTTCTACTTGGCTAGTTTCTGTCTTAGGTAATCTTCAGTTTTCTATCCCAATTTCCAGTCATGGAACCCAGACGGAAAACTACCATTCTGTCTCTAGAGAGAGAAAGAGGAGAGAGAGTTATGTTAAGTCTGGTTGCAAGTGACAGAGGACAGCCACAAGATCAACTCTCACTCCTACGTTGGTCTCACACCCTCTTGTTGTTTTTCTTTTTTGTTCAACTTACCCTTGATCTTTGGGGTGAAGTCCCACACCACCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAGAATTCTTGTCATTCCAACCTTTCTTGTATTTCAAACACAATCCAAATTTGTGAATCCTCTGCTGAGGGGACCAACCAAATTCTTATCTTCACTGCTGATTATGACGTTTGCCCGTGGCCGGGGTCACATGAATATGCCATTGTCAAAATCCATTGCACCTTAATCCTGAATTTGGTAGCATTTGTTGATATAATATCAATATTGTTATGGTAACATTGAATAAATCAATATTAGAACTTAATTATCCACTAAGCAGTAAAAAGTATCTTCCCAAACAAGTTTCTAAAAATTATTCTGAAAACATATGTTAAATCTTACACTGTGACAGAGCCTTGTGTGGAGGATGTAGATTGATGGAACTTGTTAGGAACAAGGCAGAAACTACCAACCCTAGTAGTTTACACTTCTGACCACAACACACAAACTATGAAATTAGATTAGATTTAATGATAAGACTGTTAGAAGGATGTAGTGCAAACCAACAAAATCAGATATCTGTATCTAATAATGAAGTTGCTTCTTTTAAGAAAATTTATTCTTGCTAGAATCATCTCTTATAATTGTAGTTCATCAGTTAACTACAACCAACCCTAAGGTTACTCTAGCCCAAGACTCATATCCTAAGTCTTTCAAAATCCATCGTACTCAAGGGGAAGAAGATAATTTCTTTGGTCTAGAAATCTTCTTCCATTTTGAATAGGAAAGGATCCCTCCATAAATTACTTTTGATCCAACTTGTACACTCGTATTAGTGTTCAAGATATTGTTTGTGCAAGAAGTTAGATGTTAGGCTAGAGAATTTCGCCATTTGATCCAACTTGTACACTTGTATTAGCGTTCAAGATATTGTTTGTTCAAGGAGTTAGATTTTAGGCGAGAGAATTTCACCACTTGGGCTAGTTTTTAAATTGAATTATTCCCTCGAGCTTTTAAACTCATCAAGGTCATCCACTCCTATTTAAAGAAATTGTCACTACCCTCTCTTCAAAATTCATTTCCAAAAGAGAAAAAAGAGGCAAAGAAGAAAAACCCCACCAGACTCAATCATCAAACACATACATAATCCCCAAAAACGCGTAACATACCAATATGAAACATCTCTATTTGATGCAAAATAACAAAATCTGAAGCTATTGAGTCCTACAAAACCGAAGGAAAAACAAGGTGGAAAGAAGGAGCATTCCCCACCACACAAGCCATTTGGGCAGCTGGGGGACCAAAGACATTGATGTGGGTCGCATGTCCCAATTGTCAGCAATGAGTCGCTGTTGTTGCCATTGATTCGGCGGCAGATGCCTAAGACTTCACTCTGTTCAGATTCCCAAATGCCATTTTTAGGAGTTGGATACTTTGGTTTCCCTTAGACACTGAACCTTCAAAGTTAATGAGCATAAGAAGCAGCCAAAGCCAAAGGAGGTTGGGTTGGCGTTTTGGGTATGGGATTCTAACTTCATTATCTCCTTTGACAGACTGCCGCACATGGCGATTTTAATTGGAATTGGGGACCAAAGTTTAAGTTTTGATTAAGGTTAGATCATACCAAGTTACTTTGTCCACCTTGTGACTATGATTGAAATCAAATGGGTTTTTTTTTTTTTTTCTAGAATAATAATCCTATAGTTTATCTTTGTCGCAAATCATAACTGTGTTTTAAAAATGGTTTCAAATACTTCAATAGTTTAATTATATCTTTCTATTACTTAGCCTTCATGAAATCGGTCTGAAGGAACCCAATGCCCAACTATTGACTCTTCTTAGAATTGTATTATTGAACCAAGCTAGGAATGACAGTTAGTAGACATCTACCACTTTTCACATGTTAGAGGGGCCCTTCTTTAATGCATTAAGAAAAGATGCTCAAGACTTGATCATAGGAACTTAGACCACAAACGAAAACCACCTCGGCTGGATCATAGTAGTCAATTAGTCCCCTTGCATTGAAACTATTCACATGCGGCTACCAGCTTTCTCAAAATAAGAGGCATTGCGTATTGTTCACGGAAATATATGACCTTAGTTAATTTTAAATTTAATAAACGGTATGGTTTTTTAGATTTTGCAAACCATATAGGTGTCTTGAAATCATTTTTAGGACGTAGGAATATGAATTGCAGATTAAAAAAATCACAGAAGTATAAATGTACTTGCGAATATTTAAAGGTTATTAAATAACATCTCACATGTCCCGTTTAAACAATCTGTATATGTGTTGTTTTTGTAAAACTATAAAAGGGCCAACATATTCCACATTGTTAATCAATAATTTTAGTCACATATGAAATTTACAAAAGTAGAAATCATTTTTCAATTGAAGGATCCGTTTTTAGGAACACCCTAAAATACTTGTATTTGATACTTTTTTTGTACTTTTGGGGTGGACCCAAGTCCAACAAACTCTCAACCTCTAGTGGACTGCGGAAATCGAGCCCATTAAAAAATAAAGCCCAAACATATGGAATGTGTCATCAATCTACGGCCCAATAACAAATATAAGGATTAATCAATATAATTTATGACATTATCAATTTTTTCTTACTCGTTTAAGTATCATACAATTTACTTGAAATTGAAATGAATTCACAGATCATTTTTAAAGAAGTAGATATTAAATTCACTGATATCCATGCGGAGCGGAAGCGTGTAATTTGTAAGTTTCAGTCGAAATTCAGAAGAGGTTTGATCTGCTTCCTGATTCGACTCACTTATCATAATCTGATTCAGTTTTTTTTTTTTTTTTTTTCAATTTTTTCATTGATGGTGCAGATACCATTGCTTTTGGTAGCAATGAATGTGAATCCGGTTCCGCACCAGTTTGCGGCTCAACCTCCGTGGTTCCCGATGCCGCCACTGAATCCGCCGCCGTCTTCTGCATCTTTCTGGGATAACCTAAATGTGCGTGATCGTCTAAGGGATTTGCAAGACACTCTCGATCTCGCGAAGTCGATGTATGCGTTTGTGCGTAATTTGTGGGATACTATGTCGCAGTTCATGGTGTTTTTTTTCTGCTTTTTTGTTCTAGCTTTCAAATGTTCTTGTTCTAAATTGTTGATTAAAGTGTTAATATTGATAGGCAGAAAGAACTTGAAATGTTGATGATAATTAAAGAGGGAAATCATCCGAGCAGAGTGCGGATAATGTGCATAACGACACTTCTATCAATGAATTTTCTGAATACTTGGAAGATAGAAGGATTAATTTGGAGTTGCAGAGTCGCGTTCAGTCGAAGCTGCGGTTGCTTTGATGAAAAAGTTGAGAGCTCAGCTTGATCCATTTAGGATGGTTGCTGACGAATCGAGCCCATGGGAAGAAAAATATGCTGCAGTTAGGTTATCTAATAAATTATTGAAGGCCAAGAGAAATAAGCTGTGGAGAAAGAGAAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGTAGTATTTCGGTAATTTGTATCCCAAATTATCTTACATATTTACCATAATGTTACTTGTTTCTACCTTTTTATCGTGACACGTTAGGAACGTGAAAGTTTTGACCAAGTTGATCGAGAGGCTGATGAATGGAGGGCCCGGGAAATTGCCAAGGATATTGCAAAACGCAAGGTGCTGGAATATTTACATGCTCAACTGATTTTTTTTCCCCTATTCTGTTACTGGAGGTTAAGAATTTAATATCGTTTTTTTGTGTGTGTGGGGTTGGGGAGGGGGGGGGGGGGGTGAGTAAGTCTAGACATCTGGAAACAGAGAATTATTTATTTATTTATTATAATTAATAAGAAAAGATAAATGAAACTACAAAAGGCAGGGCTATCAGACGGTAGTTTTGTTACTAGATGGAACAGTATCAAGTTTTTTTCTTTCAAATTCAGAATGAATAACCACAGTTGCAGTCATACTTGATTTTTATGGACAGGGTTGTCACAAGGACATCTATGTACCATACGGAATAGGGATTTAAGAAATATGTTGATCCAACGCATTTATGGGGCCTATTTTATCATAACCTCTGTATCTATTTATTGTTTATTTGTTTTACATATTGAAACTGTACTTTTAATTGCTGCTACCTCTCATGTTCATATAAATTTTATAGTTACCTTATCTCATGAACATTTGGGTCTCCCATATCATCTGCACTTCCTGTGGCTAGGGTTGTTGATGCAAAAGTAATGCGGTGTCTGATGTTGATATATTAACATCTATTTACATTTTTCACGCGTTATGTTGATGAAATCTTGAAGTTTTTCCTTCATGTTTTGCACTTGATTATTATTGTGCTTTTGCTTGTCTAGCTCTGGACTATAGAACATCGGCCCAAAGGATATTAACAGAATAGTGTTAATTGTTGATGAGTAATTAATCCATACAATGAAATTGGTGAATGGGTTTCAGGTGGAGAAGATGAAAGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAGGTTAGATTCTGAGGTGAGAATCAATTAAAAGAAGTACTAGTACTTTAGAACACTTCTTGCTGCCTTTTTCTCCTTCCTTTTATGAACTTCTAGCTAATGCTACATTTATTGTAGCTTGAACTAGCACTAACAGTGGAAAAGTTGCAAGAATTGCGCTCCATCAGGATCCAAAAATTGAAGAAACAAGGTTTGATTTCTTACTCTTTTTTTTTTAAACTGCAATATTATATATCCTTCTTGAATGCAGATGGTTTGATTTGCTGTGTTAGCAGATTGATTACCTAGTAACAGTCTCACTCTTTTTGGTCTTTGGCACTTTATTAGGTTTATGAGTACGATGGATAGAAGAACTAAATCTAACTCATTGTTTATTTTCTGCGTCTTCATTTTCTTTTGTATAAATGGTGTGATGTTATCTAGCTGTACTTTGGTTCTTGAATTGCTGAACTCACTATCCATTGCTCGTGTGATTTCACATAAGATCGAATAAGAGAGAGAGGGGGTAAGGGAGCTTGAGGCAAAAAAGAGGATGTGAGTGGCAATACCCTTCTAGGACTGTCAAAGTTGAATCGAAATCATTTATCTTCTTTGATGGAAGATTTTGGGAGGGAGAGCGCAGATTGAGGGAAGAGAGAGAATTGTAGCTTTTCTTCCTATCCAATTGGTTATACAACATGTTGGATAGGGAAGATCCTACAAAGTCTTTTGAGTAATCCAAGAAATAACATATTTTTCAAGCAAACAAGATATGGTGATTATACGATTTGGATGCAGAAAACCTTCAACAGAAGAGGTGTGCTAGAGATTTGTAAGATTGTTTCAAATAAAGGTAAATATAGTTTTTTTATTCCTGGAGGTAACATGAAAGGTTGGCATGACTATATGCTTCTTGTGAAAGATTCCTGAGAAGATCTCCCTAAACTAAGAAAGAGAAAGAAAGGGTGGTTTTTGGTAGTGTTGGCGAAAAACCCGTGAAGTATAAGGTGTAAGGGTAGGAAGGCTTAGAGAGGGGAGAATGAAAAATCGCGAAGGAGGCTGAGTGAAAGGAGAATGTAAAGAATTTATCTATTATTGGGTGGAAAAATACCATTGTGTTAAGGTTTAGTTTGTTCCACGGAGCCATTTTCTTTGTAACTTTACACTATATCAATGAAAATATTTGTTTTATTAAAAAAAAAAAACCGATTGCTCATGTAAGTTCTCACTACCTTCTGTTTCATATAATTGCCCACTTTATGTTTGCTGTAAATTTGTAGTTGTAGTAACATATAGATATGTGTACTAGGAAAAGTAGTATTTTGCATCTCTATGTACAATAGTATATATACTTTTGGATCCTCTGAGCAGGTAAAATTTTGTCCTTGGATCAAAGTTATGTTATAGCCTAATGATAGTGGTGGTTGGTGATATATTTGACCAGGCCATTTTCTACCTGAGGAGGATGATAAATTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGACAAGCCCTTGCTGCAGCTGATACGGATGCTGCCAAGGATGCCATTGCAACTGCAGAGGTGTCTAGGAAGATTATTCCAAATTATAACCCTGAATCAAAGGATCCAAATAGTAATACAGAAAGATGTGAAGAAGGAAATGATCAAATAACTGCAAGTACAGAAGATAAGGTCTCTTGTATCAGCACTAATAAGGAACCTGGGAAACAGTTTGGAGAAGGACAAGGTTATGGAAGAGTTTATGATTATGCAGCCAATTTACCGATGGAATTCTATCATTATTATTATGGAAGTAACGCTGATATGGGCACATTAATTGAGGTAATTGCACCAATGATTTCTGAGCTCTTCACTTATAGCAGATTCTTCGGGCATAATCTCATGAAATGCATGCGGTAGGTGTATAATCTGATGTTATGTCCAAGGATGCGTTTGGGAGTCAGAGTGTTTCTCATGGTGCCTCCCCTAGCAATTTCGAAAAAAGTACATTTCGATTAGTTTTCCAAAAAATGATTACAGTACTTGCATTGGTTCGAAAATTCTGGAAACCTGGTTTTTTGTAGCTTAAAGTTGGGAAATCTAGGTGTTTGTAGCCTATATTTGTATTGTGCAAAGGAGTGACTTTTAGAAGTATGAGTTGGTGTAGCATGTAGTTTGTAGGTTTTGTATTTCTAGAAAGATAAGTATGTGGTGTGAGAGACTTGTAAGAAATGGGTGACAGCTAGTGTAATTTTATTGTTTCAATTTGTGGGATTAGTAAATTTGTAGTTTGAGGTGAGCTAATTTACGTACTACATGCTAAAAGTAGGCTTGAAGCTAAGTCATGAGTCCAAAACTCTTACTCAAAATGTCCCCTTGGTGTATTCTGTTGAATCTCTACTAACATTGTAAAAAATTTAATAACTGTCTTGTACTAGTTATAAGTGTTTTTGGGACACTGGAAAACAAAATTTCCTTACATCAGTCTGTTAATCGACCTTGAAACAACCATTAACACCCTTGATTTTTGAATAACAAAACTATCACTTTCAATGTAGGTAAGGAGATCATGGGATGCATATATACGACCTGGAGGAAGGTAAGATGCGATTCTTTACTATAGATATTCCTCTTTTCAAGTATTGGCAGAGTCTTCCTAGGAAAACTGGTGATTTGATGGAAGTTAATAACACCTCATCGATCATATTTGAACTTCCATCATAACGTCACGAATTTATGACAAACACCACAATACTAGTACTTTATACGTAGGATTGGGTTTGTGCGTGCTCATTTCAGTAGACCTCATGATATATCTGCCGTTGCTTCTAGTTTTTGCCTATGCATACTTCCGTTCGTAATTGTATATATTCCAATGCATTCATAGCCTGAAGAGGTGGGAGAGTTATATTAACTGAATTTCGGTTCGGGATTTTGTGCAGCCGAATACCGGGACATTGGGTTCAACCACCACCACCTGCAGATGAAATATGGGCAGCATATTTGGTGCGACCAAATGAAACCAGCCACCGTACCTGCAGAATTGGTTTGTCAAAGGTGCCAGTGCAGATGGGTGTGAATTGCAAATACATCAATGACAAGCCTATCATGGATGTCCAGGCATTGGGGTATGTGGTTTCTATGATTATTATTTGCGGCAATTTAAATATTTTGCAGTTTGGTAAAAAGATAATTCGTAAATTTCACATTTGTTGATTAAGACGCCGTAAAAAATCCAGCTGAGTTCACCGTGTCAGGTAAGGAATCGTAACAAGGTTGACAAGATAACTCAGCATTGTGAAGACATCTGAGAGTAAGAGACTCTAATCCAGTCAGGAGCAGAATTCCAATTGATTGCTAATTTGCTTCTGATTCGGTATATTTGAGCTGAAGAAGATTTCATGATGATTTGTGTTTGGTTTCTAATCTTTACCATGTTAGTAGAGAGGAAGCTACCATGCGACATGCCATACATGTAAATAGAAATTTGGATATTGCATCTTCATGAATATAGGGTTTAAAGAAGAAGCCAATTCAATTTTATTTGAAATAGTTCGGGTCCCTGCTTTCTTCGAGGACAATTATTTTTTGGCAAAAAAAAAAAAAAGAAAAAGGAATGCATTTGATAGTTTATTAATTTTATTTTTAAAATTTCAAATCAAAACAGAAAGTTTTACTTGATAATTTACTTATTCTAAAAATTTATTTAATATTAATATGCTATTTTAATCTTTTATAAATTTTTTGTGCATTTTATAAGTCATGATAGTTTGTAATACATATTAAAAATTGAAAACAATGCATTTAATTGGAAACAAAATTATCTTTTGTTTTGAAAATATGATTGGTAGCAAATTTTAAAATATATATTTGAGAAACTATCATTTATAATATATGCTGTGGCCATATATGATTAGGTCCAGTTGACTTGCAAGTATGGATGACCCATATCAGAGTGTCAAATACTCAATTAATATAGATGACACTTTTTAAAGTGTTAAGATTTTCAAATTTATAATAGATGACGTTTTGAAGATAGATGACTTTTGAAGTGTCAAGTAGATGAAATATTATAGATGACATTCATGATATTTTTTAGGAAGTGTAGAATATCTCAAAAAATATAATGACACTTATAGTTGTCCAGTATAAATGACAGTTTGCAAGTGTCAGGTAAAATAGATGACACTTTTTTAAAGTGTCAATATAATAATGTAATAGATGACATTTATAAATAGATGACATTTTTTAAATATAGATGACACTTTTTCGTATGTCAAGTATTTTCAAAAGGTATAGTGACACTGTCAAATATTAATAATCCCATGGTATGGTTGACACGTATAGCATATAGATGACGCTTTCAAAAGCGTCAAGTATCTTAAACTGAGGTATAATGCACTGCTAAAATGTTTAAAAAACTATTTGAAGTGTCAGTCAATTATTTCAATAGTATAGATGACACTCGCGAAAATTCCCAAAGGTTAATATTATTGAATTTATAAATATTTTGTACTTTGAAGCTTATTTCAATTAAAATTTTAAATTCATGTATTAATTAACTTATATATTTATCACTCTTTAAATTGTTAAATGATGTTCATAATTAGGAGTGGCAATACTTTGAAGTGTTGGTGTATAAACTGTCAAGGAAAAAATGTCAAACAAAAAATAATAAATTTTACACTTTACAAAATTAAATATATCAAGAAAATCTTATTTCTCATCCTCTTCAACCAAAAAATCAAAACAAGGGGAAAAAGTTCATTCAAACCCATTCTCCACAAAGGAAACAACTTCTCTGGTTCTTCCAAGTCACCTCCTCTTCCATACTGCACATTAGTAAATTACTATAAAAATTTGATCATGGTCACTTCAGCATCGTTAATTATGAATTTAATTACTTTCCTACTAGCTAACTTCAAAAATTTAGAGTTTAAATAAATAGTGCGGTGTTGCAAACTGACTAAACAACCACGAATGAAAGAACAAAACGTATAACCAAACAAAATTTTAAGAAATTTGCAATTTAACCCTTTTCGAAGTGTTAAATATGATACTGTCGAGAACATTATATATCACAATGTTGAGAAAAACTTGTATCTCTTCAAGAATTGTGTCAAGAAATCCCAAATTCAACACTCCAAGTGTTTGACAGTATCAAGAAAATTTATTTGTGATTTGAGCAATAATCAACCACTCTCACTTATTCCAAAACAATGAAAACAGGAAAAAAGAATGTGGCCGAGGGTTCCGGACGATTCAAAATCAGTGCGAGTTTGAGCGTCCTACGATTCGGCAGCTAAATCTGCGACGGATTTCATTGAAAGTTAGAGGGGCCTCAATCTTAGAGTCGTCTCCCCTCTGCTGGGACCTTCGCTTCAAACAACTAACTAGAAAATGTAGGTAAAATTCTCTATGAAAAAACCGACAACCGAACCAGTTATTCAGAGCTTGGCTCGGCGATCTGCTTTCACTGCAATTTCCGAAGGCAAACTTGGATCAAAAGCGCATTGATTACAATGGCGCCCCATCCCATAGGACCCTTCGAATCGAAAATGAAGAGAGAAAAAAAGAAGATGAACGATGCTCAGTGAATACAAACCAGATCGATACTCATCTTACAGAGCGATAA

mRNA sequence

ATGAATTGCAAACAACTTATGGATGACTCCCGACCTCTAGCAGTTGAGAGCTTTTCTACCAGTTGGCTGTCAAATGTGAAGCAGTCCTGTGATGCCGCATCCAAAATGATGGATTACAAGATTGTAAAGCCTTCAAGGTTTCTGGATGAAACCCAGAACTTCAAATTCAATACTCTAATCCATCCATCTGTTCTCATAGCCCATGCTGATGAACTTTTCTTTGATGGCTCTATCAGACCCGTTTATGTAAGCCACGCAACATTGGGGGTCTCTAATACATCTGATTTTGTTCCAGTCAAGCACAATTCTTCACTTACTTCTTTAACTTCTAGTCCAGCCACACGAAACCGATCTTGTCATTCTGGAAGATGGAGACGATCCTTATGTACGTTACAGAAGTCTTTAGGATGTCTCAGTCCCATATGCCATAAAGTAGACCCAGGTGAAAGTACCTCGGTTGATGTTAAGAGTCAGCACCATTCCCCTCGAGTATCTCCACAAAGAAAGATTGGTCCTTCATCAGTCATGGAACCCAGACGGAAAACTACCATTCTGTCTCTAGAGAGAGAAAGAGGAGAGAGAGTTATGTTAAGTCTGGTTGCAAGTGACAGAGGACAGCCACAAGATCAACTCTCACTCCTACGTTGGTCTCACACCCTCTTGTTGTTTTTCTTTTTTGTTCAACTTACCCTTGATCTTTGGGGTGAAGTCCCACACCACCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAGAATTCTTGTCATTCCAACCTTTCTTGTATTTCAAACACAATCCAAATTTGTGAATCCTCTGCTGAGGGGACCAACCAAATTCTTATCTTCACTGCTGATTATGACGTTTGCCCGTGGCCGGGGTCACATGAATATGCCATTGTCAAAATCCATTGCACCTTAATCCTGAATTTGATCATTTTTAAAGAAGTAGATATTAAATTCACTGATATCCATGCGGAGCGGAAGCGTGTAATTTGTAAGTTTCAGTCGAAATTCAGAAGAGGTTTGATCTGCTTCCTGATTCGACTCACTTATCATAATCTGATTCAGTTTTTTTTTTTTTTTTTTTCAATTTTTTCATTGATGGTGCAGATACCATTGCTTTTGGTAGCAATGAATGTGAATCCGGTTCCGCACCAGTTTGCGGCTCAACCTCCGTGGTTCCCGATGCCGCCACTGAATCCGCCGCCGTCTTCTGCATCTTTCTGGGATAACCTAAATGTGCGTGATCGTCTAAGGGATTTGCAAGACACTCTCGATCTCGCGAAGTCGATGTATGCGTTTGTGCTCGAAGCTGCGGTTGCTTTGATGAAAAAGTTGAGAGCTCAGCTTGATCCATTTAGGATGGTTGCTGACGAATCGAGCCCATGGGAAGAAAAATATGCTGCAGTTAGGTTATCTAATAAATTATTGAAGGCCAAGAGAAATAAGCTGTGGAGAAAGAGAAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGAACGTGAAAGTTTTGACCAAGTTGATCGAGAGGCTGATGAATGGAGGGCCCGGGAAATTGCCAAGGATATTGCAAAACGCAAGGTGGAGAAGATGAAAGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAGGTTAGATTCTGAGCTTGAACTAGCACTAACAGTGGAAAAGTTGCAAGAATTGCGCTCCATCAGGATCCAAAAATTGAAGAAACAAGGCCATTTTCTACCTGAGGAGGATGATAAATTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGACAAGCCCTTGCTGCAGCTGATACGGATGCTGCCAAGGATGCCATTGCAACTGCAGAGGTGTCTAGGAAGATTATTCCAAATTATAACCCTGAATCAAAGGATCCAAATAGTAATACAGAAAGATGTGAAGAAGGAAATGATCAAATAACTGCAAGTACAGAAGATAAGGTCTCTTGTATCAGCACTAATAAGGAACCTGGGAAACAGTTTGGAGAAGGACAAGGTTATGGAAGAGTTTATGATTATGCAGCCAATTTACCGATGGAATTCTATCATTATTATTATGGAAGTAACGCTGATATGGGCACATTAATTGAGGTAAGGAGATCATGGGATGCATATATACGACCTGGAGGAAGCCGAATACCGGGACATTGGGTTCAACCACCACCACCTGCAGATGAAATATGGGCAGCATATTTGGTGCGACCAAATGAAACCAGCCACCGTACCTGCAGAATTGGTTTGTCAAAGGTGCCAGTGCAGATGGGTGTGAATTGCAAATACATCAATGACAAGCCTATCATGGATGTCCAGGCATTGGGGAAAAAAGAATGTGGCCGAGGGTTCCGGACGATTCAAAATCAGTGCGAGTTTGAGCGTCCTACGATTCGGCAGCTAAATCTGCGACGGATTTCATTGAAAGTTAGAGGGGCCTCAATCTTAGAGTCGTCTCCCCTCTGCTGGGACCTTCGCTTCAAACAACTAACTAGAAAATGTAGAGCTTGGCTCGGCGATCTGCTTTCACTGCAATTTCCGAAGGCAAACTTGGATCAAAAGCGCATTGATTACAATGGCGCCCCATCCCATAGGACCCTTCGAATCGAAAATGAAGAGAGAAAAAAAGAAGATGAACGATGCTCAGTGAATACAAACCAGATCGATACTCATCTTACAGAGCGATAA

Coding sequence (CDS)

ATGAATTGCAAACAACTTATGGATGACTCCCGACCTCTAGCAGTTGAGAGCTTTTCTACCAGTTGGCTGTCAAATGTGAAGCAGTCCTGTGATGCCGCATCCAAAATGATGGATTACAAGATTGTAAAGCCTTCAAGGTTTCTGGATGAAACCCAGAACTTCAAATTCAATACTCTAATCCATCCATCTGTTCTCATAGCCCATGCTGATGAACTTTTCTTTGATGGCTCTATCAGACCCGTTTATGTAAGCCACGCAACATTGGGGGTCTCTAATACATCTGATTTTGTTCCAGTCAAGCACAATTCTTCACTTACTTCTTTAACTTCTAGTCCAGCCACACGAAACCGATCTTGTCATTCTGGAAGATGGAGACGATCCTTATGTACGTTACAGAAGTCTTTAGGATGTCTCAGTCCCATATGCCATAAAGTAGACCCAGGTGAAAGTACCTCGGTTGATGTTAAGAGTCAGCACCATTCCCCTCGAGTATCTCCACAAAGAAAGATTGGTCCTTCATCAGTCATGGAACCCAGACGGAAAACTACCATTCTGTCTCTAGAGAGAGAAAGAGGAGAGAGAGTTATGTTAAGTCTGGTTGCAAGTGACAGAGGACAGCCACAAGATCAACTCTCACTCCTACGTTGGTCTCACACCCTCTTGTTGTTTTTCTTTTTTGTTCAACTTACCCTTGATCTTTGGGGTGAAGTCCCACACCACCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAGAATTCTTGTCATTCCAACCTTTCTTGTATTTCAAACACAATCCAAATTTGTGAATCCTCTGCTGAGGGGACCAACCAAATTCTTATCTTCACTGCTGATTATGACGTTTGCCCGTGGCCGGGGTCACATGAATATGCCATTGTCAAAATCCATTGCACCTTAATCCTGAATTTGATCATTTTTAAAGAAGTAGATATTAAATTCACTGATATCCATGCGGAGCGGAAGCGTGTAATTTGTAAGTTTCAGTCGAAATTCAGAAGAGGTTTGATCTGCTTCCTGATTCGACTCACTTATCATAATCTGATTCAGTTTTTTTTTTTTTTTTTTTCAATTTTTTCATTGATGGTGCAGATACCATTGCTTTTGGTAGCAATGAATGTGAATCCGGTTCCGCACCAGTTTGCGGCTCAACCTCCGTGGTTCCCGATGCCGCCACTGAATCCGCCGCCGTCTTCTGCATCTTTCTGGGATAACCTAAATGTGCGTGATCGTCTAAGGGATTTGCAAGACACTCTCGATCTCGCGAAGTCGATGTATGCGTTTGTGCTCGAAGCTGCGGTTGCTTTGATGAAAAAGTTGAGAGCTCAGCTTGATCCATTTAGGATGGTTGCTGACGAATCGAGCCCATGGGAAGAAAAATATGCTGCAGTTAGGTTATCTAATAAATTATTGAAGGCCAAGAGAAATAAGCTGTGGAGAAAGAGAAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGAACGTGAAAGTTTTGACCAAGTTGATCGAGAGGCTGATGAATGGAGGGCCCGGGAAATTGCCAAGGATATTGCAAAACGCAAGGTGGAGAAGATGAAAGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAGGTTAGATTCTGAGCTTGAACTAGCACTAACAGTGGAAAAGTTGCAAGAATTGCGCTCCATCAGGATCCAAAAATTGAAGAAACAAGGCCATTTTCTACCTGAGGAGGATGATAAATTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGACAAGCCCTTGCTGCAGCTGATACGGATGCTGCCAAGGATGCCATTGCAACTGCAGAGGTGTCTAGGAAGATTATTCCAAATTATAACCCTGAATCAAAGGATCCAAATAGTAATACAGAAAGATGTGAAGAAGGAAATGATCAAATAACTGCAAGTACAGAAGATAAGGTCTCTTGTATCAGCACTAATAAGGAACCTGGGAAACAGTTTGGAGAAGGACAAGGTTATGGAAGAGTTTATGATTATGCAGCCAATTTACCGATGGAATTCTATCATTATTATTATGGAAGTAACGCTGATATGGGCACATTAATTGAGGTAAGGAGATCATGGGATGCATATATACGACCTGGAGGAAGCCGAATACCGGGACATTGGGTTCAACCACCACCACCTGCAGATGAAATATGGGCAGCATATTTGGTGCGACCAAATGAAACCAGCCACCGTACCTGCAGAATTGGTTTGTCAAAGGTGCCAGTGCAGATGGGTGTGAATTGCAAATACATCAATGACAAGCCTATCATGGATGTCCAGGCATTGGGGAAAAAAGAATGTGGCCGAGGGTTCCGGACGATTCAAAATCAGTGCGAGTTTGAGCGTCCTACGATTCGGCAGCTAAATCTGCGACGGATTTCATTGAAAGTTAGAGGGGCCTCAATCTTAGAGTCGTCTCCCCTCTGCTGGGACCTTCGCTTCAAACAACTAACTAGAAAATGTAGAGCTTGGCTCGGCGATCTGCTTTCACTGCAATTTCCGAAGGCAAACTTGGATCAAAAGCGCATTGATTACAATGGCGCCCCATCCCATAGGACCCTTCGAATCGAAAATGAAGAGAGAAAAAAAGAAGATGAACGATGCTCAGTGAATACAAACCAGATCGATACTCATCTTACAGAGCGATAA

Protein sequence

MNCKQLMDDSRPLAVESFSTSWLSNVKQSCDAASKMMDYKIVKPSRFLDETQNFKFNTLIHPSVLIAHADELFFDGSIRPVYVSHATLGVSNTSDFVPVKHNSSLTSLTSSPATRNRSCHSGRWRRSLCTLQKSLGCLSPICHKVDPGESTSVDVKSQHHSPRVSPQRKIGPSSVMEPRRKTTILSLERERGERVMLSLVASDRGQPQDQLSLLRWSHTLLLFFFFVQLTLDLWGEVPHHPPPPPQKKKKKKNSCHSNLSCISNTIQICESSAEGTNQILIFTADYDVCPWPGSHEYAIVKIHCTLILNLIIFKEVDIKFTDIHAERKRVICKFQSKFRRGLICFLIRLTYHNLIQFFFFFFSIFSLMVQIPLLLVAMNVNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMYAFVLEAAVALMKKLRAQLDPFRMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPNSNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYGSNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPNETSHRTCRIGLSKVPVQMGVNCKYINDKPIMDVQALGKKECGRGFRTIQNQCEFERPTIRQLNLRRISLKVRGASILESSPLCWDLRFKQLTRKCRAWLGDLLSLQFPKANLDQKRIDYNGAPSHRTLRIENEERKKEDERCSVNTNQIDTHLTER

Homology

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BLAST of Sgr016030 vs. NCBI nr
Match: XP_022147279.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia] >XP_022147280.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia])

HSP 1 Score: 587.8 bits (1514), Expect = 1.6e-163
Identity = 322/405 (79.51%), Postives = 335/405 (82.72%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMYAFV---- 439
           +N VPHQFAAQPPWF M    PPPS ASFW+NLNVRDRLRDLQ+TLDLAKSM   +    
Sbjct: 1   MNSVPHQFAAQPPWFSM----PPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60

Query: 440 ---------------------------------------LEAAVALMKKLRAQLDPFRMV 499
                                                  +EA VALM+KLRAQL PFRMV
Sbjct: 61  IFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMV 120

Query: 500 ADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADEWRA 559
            DESSPW+EK AAVRLS KLLKAKRNKLWRKRKRKRIAESLAKER SFD VDREADEWRA
Sbjct: 121 YDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRA 180

Query: 560 REIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQGHF 619
           REIAKDIAKRKVEKMKEIAR+KAKEEKKR+DSELELAL VEKLQELRSIRIQKLKKQGHF
Sbjct: 181 REIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHF 240

Query: 620 LPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPNSNT 679
           LPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRK IP+YNPESKDPNSN 
Sbjct: 241 LPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNA 300

Query: 680 ERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYGSNA 739
           ER EE NDQ TAS +DKVS IST+KEPGKQFGEGQG GRVYDYAANLPMEFYHYYYGSN 
Sbjct: 301 ERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNT 360

Query: 740 DMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           DMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 DMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 401

[Close]

BLAST of Sgr016030 vs. NCBI nr
Match: XP_038877454.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida] >XP_038877455.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida] >XP_038877456.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida])

HSP 1 Score: 558.1 bits (1437), Expect = 1.3e-154
Identity = 309/409 (75.55%), Postives = 328/409 (80.20%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSS-ASFWDNLNVRDRLRDLQDTLDLAKSMYAFV--- 439
           +NPVPHQFA QPPWFP+PP NPPPSS +SFWDNLNVRDRLRDLQDTLDLAKSM   +   
Sbjct: 1   MNPVPHQFAPQPPWFPVPPPNPPPSSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEML 60

Query: 440 -------------------------------------------LEAAVALMKKLRAQLDP 499
                                                      +E A ALMK+LRAQL P
Sbjct: 61  MIVKEGNSSEQSADNLPNGSSIGEFSDYLKDRRINSELQESRSVEIAAALMKRLRAQLHP 120

Query: 500 FRMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREAD 559
           F +  DESS  E    AV+LS KLLKAKRNK WRK+KRKRIAESLAKERESFDQVD+EAD
Sbjct: 121 FSLATDESSLSE----AVKLSGKLLKAKRNKQWRKKKRKRIAESLAKERESFDQVDQEAD 180

Query: 560 EWRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKK 619
           +WRAREIAKDIAKRKVEKMKEIARIKAKEEKK+LDSELELAL VEKLQELRSIRIQKLKK
Sbjct: 181 KWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 620 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDP 679
           QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRK IP+YNPES+DP
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPESRDP 300

Query: 680 NSNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYY 739
            S T   EE NDQ TAS +DK+S  ST+KEPGKQFGE QGYGR+YDYA NLPMEFYHYYY
Sbjct: 301 ASATNGSEERNDQRTASADDKISNTSTDKEPGKQFGEVQGYGRMYDYAVNLPMEFYHYYY 360

Query: 740 GSNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           GSN DMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 GSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 405

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BLAST of Sgr016030 vs. NCBI nr
Match: XP_022924846.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 557.4 bits (1435), Expect = 2.3e-154
Identity = 312/408 (76.47%), Postives = 327/408 (80.15%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMYAFV---- 439
           +NPVPHQFAAQPP F MPP N PPS +SFWDNLNVRDRLRDLQD+LDLAKSM   +    
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 440 ------------------------------------------LEAAVALMKKLRAQLDPF 499
                                                     +E A ALMK+LR QL PF
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 500 RMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADE 559
           R+  DESS  E    AV+LS KL KAKRNK WRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 560 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQ 619
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKK+LDSELELAL VEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 620 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPN 679
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRK IP+YN ES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLESRDPD 300

Query: 680 SNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYG 739
           S TER EE NDQ TAS +DKVS ISTNKEPGKQFGE QG+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 740 SNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           SN DMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 404

[Close]

BLAST of Sgr016030 vs. NCBI nr
Match: XP_022980475.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita maxima])

HSP 1 Score: 556.2 bits (1432), Expect = 5.1e-154
Identity = 311/408 (76.23%), Postives = 326/408 (79.90%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMYAFV---- 439
           +NPVPHQFAAQPP F MPP N PPS +SFWDNLNVRDRLRDLQD+LDLAKSM   +    
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 440 ------------------------------------------LEAAVALMKKLRAQLDPF 499
                                                     +E A ALMK+LR QL PF
Sbjct: 61  IIKESKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 500 RMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADE 559
           R+  DESS  E    AV+LS KL KAKRNK WRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 560 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQ 619
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKK+LDSELELAL VEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 620 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPN 679
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRK I +YNPES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTISSYNPESRDPD 300

Query: 680 SNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYG 739
           S TER EE NDQ TAS +DKVS  STNKEPGKQFGE QG+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERPEERNDQTTASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 740 SNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           SN DMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 404

[Close]

BLAST of Sgr016030 vs. NCBI nr
Match: KAG6582639.1 (Protein ABIL1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 555.4 bits (1430), Expect = 8.7e-154
Identity = 312/413 (75.54%), Postives = 327/413 (79.18%), Query Frame = 0


Query: 375 LVAMNVNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMYAF 434
           L A  +NPVPHQFAAQPP F MPP N P S +SFWDNLNVRDRLRDLQD+LDLAKSM   
Sbjct: 301 LKAAAMNPVPHQFAAQPPRFLMPPPNQPASCSSFWDNLNVRDRLRDLQDSLDLAKSMQKE 360

Query: 435 V----------------------------------------------LEAAVALMKKLRA 494
           +                                              +E A ALMK+LR 
Sbjct: 361 LEMLTIIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLRE 420

Query: 495 QLDPFRMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVD 554
           QL PFR+  DESS  E    AV+LS KL KAKRNK WRKRKRKRIAESLAKERESFDQVD
Sbjct: 421 QLHPFRIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 480

Query: 555 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQ 614
           READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKK+LDSELELAL VEKLQELRSIRIQ
Sbjct: 481 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQ 540

Query: 615 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPE 674
           KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRK IP+YNPE
Sbjct: 541 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPE 600

Query: 675 SKDPNSNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFY 734
           S+DP+S TER EE NDQ  AS +DKVS  STNKEPGKQFGE QG+GR YDYAANLPMEFY
Sbjct: 601 SRDPDSATERSEERNDQRAASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFY 660

Query: 735 HYYYGSNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           HYYYGSN DMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 661 HYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 709

[Close]

BLAST of Sgr016030 vs. ExPASy Swiss-Prot
Match: Q8VYD3 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP59 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.5e-87
Identity = 200/401 (49.88%), Postives = 245/401 (61.10%), Query Frame = 0


Query: 380 VNPVPHQFAAQPP--WFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSM------ 439
           +NP   Q    PP  W PM P + PP    FW+  N+ D+L+ LQDTL+LAKSM      
Sbjct: 1   MNPANFQ-PPNPPFHWAPMLPPD-PPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEA 60

Query: 440 ---------------------------------YAFVLEAAVALMKKLRAQLDPFRMVAD 499
                                                ++AA +LM  LRAQL+PFR V D
Sbjct: 61  LKMIKDAKGSVENAVQDSGVEYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVD 120

Query: 500 ESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADEWRARE 559
           E+SPWEEK AAVRL+ K+ K+ RNKLW+KRKR+  AE  AKE E F+Q DREADEWR +E
Sbjct: 121 ENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWREKE 180

Query: 560 IAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQGHFLP 619
           +AKD+A RKV++MK I +IKAK E+KRL+ ELELAL VE++QELRS+RI+KLKKQGHFLP
Sbjct: 181 MAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGHFLP 240

Query: 620 EEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPNSNTER 679
           EEDDKF E VRAAVE+EE QA +  +T+  +  IA+ E +     N      D +SNT  
Sbjct: 241 EEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDSNT-- 300

Query: 680 CEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYGSNADM 739
                        +  SC  T K P              D  +NLP+E YHYYYGSN DM
Sbjct: 301 -------------NAASCERTMKAPDNG----------CDNISNLPVEVYHYYYGSNIDM 360

[Close]

BLAST of Sgr016030 vs. ExPASy TrEMBL
Match: A0A6J1CZQ3 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Momordica charantia OX=3673 GN=LOC111016273 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 7.7e-164
Identity = 322/405 (79.51%), Postives = 335/405 (82.72%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMYAFV---- 439
           +N VPHQFAAQPPWF M    PPPS ASFW+NLNVRDRLRDLQ+TLDLAKSM   +    
Sbjct: 1   MNSVPHQFAAQPPWFSM----PPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60

Query: 440 ---------------------------------------LEAAVALMKKLRAQLDPFRMV 499
                                                  +EA VALM+KLRAQL PFRMV
Sbjct: 61  IFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMV 120

Query: 500 ADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADEWRA 559
            DESSPW+EK AAVRLS KLLKAKRNKLWRKRKRKRIAESLAKER SFD VDREADEWRA
Sbjct: 121 YDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRA 180

Query: 560 REIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQGHF 619
           REIAKDIAKRKVEKMKEIAR+KAKEEKKR+DSELELAL VEKLQELRSIRIQKLKKQGHF
Sbjct: 181 REIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHF 240

Query: 620 LPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPNSNT 679
           LPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRK IP+YNPESKDPNSN 
Sbjct: 241 LPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNA 300

Query: 680 ERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYGSNA 739
           ER EE NDQ TAS +DKVS IST+KEPGKQFGEGQG GRVYDYAANLPMEFYHYYYGSN 
Sbjct: 301 ERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNT 360

Query: 740 DMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           DMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 DMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 401

[Close]

BLAST of Sgr016030 vs. ExPASy TrEMBL
Match: A0A6J1EAK8 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432209 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 1.1e-154
Identity = 312/408 (76.47%), Postives = 327/408 (80.15%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMYAFV---- 439
           +NPVPHQFAAQPP F MPP N PPS +SFWDNLNVRDRLRDLQD+LDLAKSM   +    
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 440 ------------------------------------------LEAAVALMKKLRAQLDPF 499
                                                     +E A ALMK+LR QL PF
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 500 RMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADE 559
           R+  DESS  E    AV+LS KL KAKRNK WRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 560 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQ 619
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKK+LDSELELAL VEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 620 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPN 679
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRK IP+YN ES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLESRDPD 300

Query: 680 SNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYG 739
           S TER EE NDQ TAS +DKVS ISTNKEPGKQFGE QG+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 740 SNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           SN DMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 404

[Close]

BLAST of Sgr016030 vs. ExPASy TrEMBL
Match: A0A6J1IWF2 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479855 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 2.5e-154
Identity = 311/408 (76.23%), Postives = 326/408 (79.90%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMYAFV---- 439
           +NPVPHQFAAQPP F MPP N PPS +SFWDNLNVRDRLRDLQD+LDLAKSM   +    
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 440 ------------------------------------------LEAAVALMKKLRAQLDPF 499
                                                     +E A ALMK+LR QL PF
Sbjct: 61  IIKESKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 500 RMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADE 559
           R+  DESS  E    AV+LS KL KAKRNK WRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 560 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQ 619
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKK+LDSELELAL VEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 620 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPN 679
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRK I +YNPES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTISSYNPESRDPD 300

Query: 680 SNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYG 739
           S TER EE NDQ TAS +DKVS  STNKEPGKQFGE QG+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERPEERNDQTTASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 740 SNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           SN DMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 404

[Close]

BLAST of Sgr016030 vs. ExPASy TrEMBL
Match: A0A6J1EAC6 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432209 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 1.6e-153
Identity = 311/413 (75.30%), Postives = 327/413 (79.18%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMY------- 439
           +NPVPHQFAAQPP F MPP N PPS +SFWDNLNVRDRLRDLQD+LDLAKS+        
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSIINIDRQKE 60

Query: 440 --------------------------------------------AFVLEAAVALMKKLRA 499
                                                       +  +E A ALMK+LR 
Sbjct: 61  LEMLTIIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLRE 120

Query: 500 QLDPFRMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVD 559
           QL PFR+  DESS  E    AV+LS KL KAKRNK WRKRKRKRIAESLAKERESFDQVD
Sbjct: 121 QLHPFRIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 180

Query: 560 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQ 619
           READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKK+LDSELELAL VEKLQELRSIRIQ
Sbjct: 181 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQ 240

Query: 620 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPE 679
           KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRK IP+YN E
Sbjct: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLE 300

Query: 680 SKDPNSNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFY 739
           S+DP+S TER EE NDQ TAS +DKVS ISTNKEPGKQFGE QG+GR YDYAANLPMEFY
Sbjct: 301 SRDPDSATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFY 360

Query: 740 HYYYGSNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           HYYYGSN DMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 HYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 409

[Close]

BLAST of Sgr016030 vs. ExPASy TrEMBL
Match: A0A6J1IZE8 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479855 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 3.6e-153
Identity = 310/413 (75.06%), Postives = 326/413 (78.93%), Query Frame = 0


Query: 380 VNPVPHQFAAQPPWFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSMY------- 439
           +NPVPHQFAAQPP F MPP N PPS +SFWDNLNVRDRLRDLQD+LDLAKS+        
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSIINIDRQKE 60

Query: 440 --------------------------------------------AFVLEAAVALMKKLRA 499
                                                       +  +E A ALMK+LR 
Sbjct: 61  LEMLTIIKESKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLRE 120

Query: 500 QLDPFRMVADESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVD 559
           QL PFR+  DESS  E    AV+LS KL KAKRNK WRKRKRKRIAESLAKERESFDQVD
Sbjct: 121 QLHPFRIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 180

Query: 560 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQ 619
           READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKK+LDSELELAL VEKLQELRSIRIQ
Sbjct: 181 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQ 240

Query: 620 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPE 679
           KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRK I +YNPE
Sbjct: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTISSYNPE 300

Query: 680 SKDPNSNTERCEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFY 739
           S+DP+S TER EE NDQ TAS +DKVS  STNKEPGKQFGE QG+GR YDYAANLPMEFY
Sbjct: 301 SRDPDSATERPEERNDQTTASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFY 360

Query: 740 HYYYGSNADMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 742
           HYYYGSN DMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRP
Sbjct: 361 HYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRP 409

[Close]

BLAST of Sgr016030 vs. TAIR 10
Match: AT2G46200.1 (unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink). )

HSP 1 Score: 325.1 bits (832), Expect = 1.8e-88
Identity = 200/401 (49.88%), Postives = 245/401 (61.10%), Query Frame = 0


Query: 380 VNPVPHQFAAQPP--WFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSM------ 439
           +NP   Q    PP  W PM P + PP    FW+  N+ D+L+ LQDTL+LAKSM      
Sbjct: 1   MNPANFQ-PPNPPFHWAPMLPPD-PPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEA 60

Query: 440 ---------------------------------YAFVLEAAVALMKKLRAQLDPFRMVAD 499
                                                ++AA +LM  LRAQL+PFR V D
Sbjct: 61  LKMIKDAKGSVENAVQDSGVEYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVD 120

Query: 500 ESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADEWRARE 559
           E+SPWEEK AAVRL+ K+ K+ RNKLW+KRKR+  AE  AKE E F+Q DREADEWR +E
Sbjct: 121 ENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWREKE 180

Query: 560 IAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQGHFLP 619
           +AKD+A RKV++MK I +IKAK E+KRL+ ELELAL VE++QELRS+RI+KLKKQGHFLP
Sbjct: 181 MAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGHFLP 240

Query: 620 EEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPNSNTER 679
           EEDDKF E VRAAVE+EE QA +  +T+  +  IA+ E +     N      D +SNT  
Sbjct: 241 EEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDSNT-- 300

Query: 680 CEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYGSNADM 739
                        +  SC  T K P              D  +NLP+E YHYYYGSN DM
Sbjct: 301 -------------NAASCERTMKAPDNG----------CDNISNLPVEVYHYYYGSNIDM 360

[Close]

BLAST of Sgr016030 vs. TAIR 10
Match: AT2G46200.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 325.1 bits (832), Expect = 1.8e-88
Identity = 200/401 (49.88%), Postives = 245/401 (61.10%), Query Frame = 0


Query: 380 VNPVPHQFAAQPP--WFPMPPLNPPPSSASFWDNLNVRDRLRDLQDTLDLAKSM------ 439
           +NP   Q    PP  W PM P + PP    FW+  N+ D+L+ LQDTL+LAKSM      
Sbjct: 1   MNPANFQ-PPNPPFHWAPMLPPD-PPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEA 60

Query: 440 ---------------------------------YAFVLEAAVALMKKLRAQLDPFRMVAD 499
                                                ++AA +LM  LRAQL+PFR V D
Sbjct: 61  LKMIKDAKGSVENAVQDSGVEYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVD 120

Query: 500 ESSPWEEKYAAVRLSNKLLKAKRNKLWRKRKRKRIAESLAKERESFDQVDREADEWRARE 559
           E+SPWEEK AAVRL+ K+ K+ RNKLW+KRKR+  AE  AKE E F+Q DREADEWR +E
Sbjct: 121 ENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWREKE 180

Query: 560 IAKDIAKRKVEKMKEIARIKAKEEKKRLDSELELALTVEKLQELRSIRIQKLKKQGHFLP 619
           +AKD+A RKV++MK I +IKAK E+KRL+ ELELAL VE++QELRS+RI+KLKKQGHFLP
Sbjct: 181 MAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGHFLP 240

Query: 620 EEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKIIPNYNPESKDPNSNTER 679
           EEDDKF E VRAAVE+EE QA +  +T+  +  IA+ E +     N      D +SNT  
Sbjct: 241 EEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDSNT-- 300

Query: 680 CEEGNDQITASTEDKVSCISTNKEPGKQFGEGQGYGRVYDYAANLPMEFYHYYYGSNADM 739
                        +  SC  T K P              D  +NLP+E YHYYYGSN DM
Sbjct: 301 -------------NAASCERTMKAPDNG----------CDNISNLPVEVYHYYYGSNIDM 360

The following BLAST results are available for this feature:

BLAST of Sgr016030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147279.1	1.6e-163	79.51	U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia] >XP...	[more]
XP_038877454.1	1.3e-154	75.55	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa his...	[more]
XP_022924846.1	2.3e-154	76.47	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita mos...	[more]
XP_022980475.1	5.1e-154	76.23	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita max...	[more]
KAG6582639.1	8.7e-154	75.54	Protein ABIL1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sgr016030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYD3	2.5e-87	49.88	U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana O...	[more]

BLAST of Sgr016030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZQ3	7.7e-164	79.51	U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Momordica charantia OX...	[more]
A0A6J1EAK8	1.1e-154	76.47	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita m...	[more]
A0A6J1IWF2	2.5e-154	76.23	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita m...	[more]
A0A6J1EAC6	1.6e-153	75.30	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita m...	[more]
A0A6J1IZE8	3.6e-153	75.06	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita m...	[more]

BLAST of Sgr016030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46200.1	1.8e-88	49.88	unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 1...	[more]
AT2G46200.2	1.8e-88	49.88	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 585..605
None	No IPR available	COILS	Coil	Coil	coord: 525..545
None	No IPR available	COILS	Coil	Coil	coord: 497..517
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 623..647
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..178
None	No IPR available	PANTHER	PTHR48190	FAMILY NOT NAMED	coord: 433..742
IPR031974	Programmed cell death protein 7	PFAM	PF16021	PDCD7	coord: 465..738 e-value: 3.5E-16 score: 59.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr016030.1	Sgr016030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane