Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCGGTCAATTCTCAGAGCAACCGCCGCAGCCTCAAAACACCACCTCTGCAATCGGAATCACTCTCCGATCCTATCACTTACTTCAAATTACTCTGCTAAGACCACCAAATCCACCGTTAAGAAGGCCAAGAAAGGTAAGTCCAAGGCCGACGCCAAAGCCGCCGATGATCCCTCCGCCTCGGCTGCTGCTTCCGACGACTTAGATGCGGCACTTTCTGATGATAAATCCCGCGCCCGCCGTCTCGCTGCTGAGGAAAATGATCCCTCACTCGATGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCCTCGCTCTCACAGGTCACTCGCAAGGATACCTGCACTTATTTCAAATTCAAGTACGTATATTTTCTACATTGTTTAGGTGTAAATGTTTATTGGGATGTTTATTCATTTCTTTACGAAATATTGGAAGTATGGAAGAACTAAATGAGGTACTGCCGGAGGGATTGCCTTTGGGAATGATCAAGGAGTTCGAGGGGTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAGTTTCTTGGATCTCCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCGGTCACCGGATGGTATTACTTTTCCTCTACTGTCTTTTCTTTTGGGGGGTTAGGGAAACGGTTCTCGTCTTATTTGTTTAGACCGAATGGGATTGGTAACTGAGGCTGGAGATTGAACCCTCGAACGTCTGAATCTTAGGTCAAATAAATGTATTTAAGTATTTTCGTGCTGCTATTTAAATGTCCAGGTTCAAAAATTAGAAAACAGATTGTATTGGATGGTCCGGTTAATTGTGGAAAGAGTATTACGCTGGCCATGCTCGTTAACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTACGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAGAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGTGAGGACTTTTTCCTGCTACTTCAAAGTTAGATAGAAGTATTGGTGTGTTTTCTCAGGATCTTCTAGTGCATTTGTTATGAATATGCAAGGTCAAAATTTCAATAGTTTTCTTCCCCAGCCTCTGAAGTCTTTGGATCGCTATCTCATGTTTTTCTGTTCATCGTTTTAATTCTCGAACCTTGTATGTGCATCAGATGTAGTTTAATGATTTGATTTCTAATTCTATTGACACGTTAATTCTTGCACACCATATTCAGAATCTTGACTAGGGAAATGATCTCTCGTGATCATAATTCTTTATGGTAACTGACTGGGACATGTCTCGTGCATAGTGTTTACTGTTTTGTGATAAGCTTTCGGGAGATCATGTGAGGACCGAAGATAATATGTAAAGCTGAAACAGTTACCTTATTTATTTACTTTTCTTTGGCTGGCTGGTTTTGACCAGGATTTTCTGAAGTTCAATGAGACCCGCTTAAGACAATTGCCATGTCAAATATCTGAACCTATACCTTTGGGAGAGGGTGTTGGTGTTGGCCTGATGAAAGGTGCTGATTCCATGACGATGCCTGAGGGTTCAAATTTATATGACTTAATTGATACTGGAATCAAGCACACCCATGCGGCGGTTGGGGTGGTTGTTCGTTTAAGAAAAGAATTATCACTTGTGAAAGATGTTCCTGTGCTAATCGCTATTGATCAAGTGAGACACAAATCTGCATCTACCCTTCTTTGATTTCTAGCATTCAGTTTCTTGGATGAATGAAATCTTTCAAAATTAATTTTAATAGCAATAATAATTATCTAAGATTGCTTATTTGTTGCTGTTACTTCTTGTTCAGTATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTCACTGTTCGTTCTACTCGACCAATACATGCTAGAGAACTTGCAATGGTTAGTACAAACGACTTGTTTGAATTGATTTTGTTGTGTTCTACTCACTTCCATGTCTTGCAATGCATTGGATGTTCCTGGAATATCTTGTTGGGTTTTTCTGTTTTTTTTCTTGGTCTCTTTTTACTTAATGCCAACTAAACTACTTCGTGCGTTTAAGCTTCACGATGGAACTGTTCCACCTCCTATCTCGGAACAGGGAAAATAATACATTAAATGTGAAATATTCTTTTACCTTTTTTTGATGGAAAACAAACATCTTTCCCTGGAAATCTTAGGTAGACTGCATTTTCAGCCTTCAGCTTATACTCCGTTCACATTGAACTTTAGACTTTTAATTATGAGAATTGGGTCCATGGAGTTCCGGAATAATAAGAAAACTGCTGCAACACGCCAACATTGGGTTCATGGCATTCTAATTTAGTTGGAACTAAACATTTTTTTCCGGTCACCTACAATTAAATTAGCTAGCCCCTATACTTCCATTTTTTTTATAGCTTTTTGCAGTTTTGATTCCATTGCCTAAAATTTTTTTAATTTTTGCCGTAAATCTCATGTCCCTCACTTTTATTTATAATGTTTCTGGTTCAGATTGTTCGGGGACTTGAAACAATATCATAAACAGAATGATATGATCCAAAAAAGAAACTAAAGTTGAAAGAATGATTAAATCAACGATGTTTTATGAATACAAGTGAAGAAATATAATAGTTAGGCTTAGGATTTAGTGTTCTCGCTTTTTTGTTAGATAACTTTCTCTGGGAGTATTTATTAGTTATGACTGCACTTTTTGTTTCAACAATGTTTTTTTTTTTCTTTCTTCCATATTTGGCCTTTTCTATCGTTTTCTTTTTCCTATGTATCATTTAGATTAGTTTTGGAAACCTACAATCCAATTGGTTATGAAATCTGATATCTGATTGGTTCTAGATTGGCCAAAAGAGGAAAGGTTTCAAGGTAATGGGGCTTATTAATGGAGTATTCAGAATCAGGAAGTAAAAATAGAATATTAAGAGAAAAACAAAGTTGATGGCTCATTCAGGTATTAGTATGTTATTGACACATCTCGACCAGTGAGTTAGAAATGGAAAAATGAAGTTTCTTTTTTGGGTCCCTTTCAGATAAAAAAAGTTTCTTTTTTGGGTTTTAAAAAACATGGAAAAAGGAAAACCAAAAAAAGAAGATATCCATACGATGCAATAGTTCAGAAGTTTGGTTTTAAATGGTTGGAGGATAACCATCGTTGGCTGGCCTAGTGGTCATAAGGGCCAATGAAAAAATGAAGGGCTCAGAGGAAATGGATTCAAACCATGGTGGTCATTACCTAAGATTTAATATCCTACGAATTACCTTAACAACTAAATGTAGTAGGATCAGACGGTTGTCCCGTGAGATTAGTTGAGGTGTGCGTAAGTTGGTCTAAACACTCACGGATATAAAAAAAAAAAAAAAAAATGGTTGGAGGATATAAAATTTATTTTACCCTTGTATTGCGATTTTCAAACGATTCTTAAATCCTGTTCTGGCTTGGATATTTTTGCAATCAATGATAAGAATTACAAATTTTTTATAGGTAAACGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTAGGAAAGCTTCGTCAAGACTTGCCAGATGTTCCTCTAGATGCACGTGTTAATTTCCCCCGCTACAGTCTTGATGAAGCGGCTTCTGTTTGCCACTATTACCTTAGGTACGCTTATTTTGTTGTTATTTTGTGAAGAAACTAATTTCATTGAAAAAATTAAGAATGTTATATAAAGAGAAAAAAGAATCCCTACAAAAGCTTTGGTTAGTCAAGGATTTAGAATAAACCCCCCAATTCGCTATTAGAGGAGAAGAGTATTTAAAAGGAAAAACTCCTCGTCAACTCTAATAGAGGTGATAGTAAGTTGCAGAAAGAGTTAGCTGTTAGACGGTATTGCTGACTCCAGTCTCTTGACCTATGTCCTAAAAATTTTCTTATTTCGAACCTCTCAAATCTCATAAAATAAAAAAGGTGGTACTTGACTTAATGATACTAGATGAACGAGGCTTGTTGATAAGAGGACCACAACGGACTTTGAGAGTCCTCTAGACTCCTATCGACAAGAAGCAACCTATCACAGGTTGAAAACCGTTCGAAATTTCTCCTGTACACTCCTAGCAAGAGATCAATGGAAAAAACATGGGATCATGATTTTCTCCTGCTTTTTCGGGTGATACCTATCTCTGTATGTGTAGTGGGTGGGGCATCTTTTTGGTGCCATATATTTGTATTGATTTTCTACTAGAGAAAAAATCTACCTCCCAAGAAACCAAGTTTATAAACTAATTTTTCTTCCGAGACTTGTCTCACTAGTCATTTTAGGCATAGCAAAATTCATAATACTAATTGGATTGAGCCTTGGTATGGAAACCTAGTAAGTGATAACTTTGAATTAAAAATGGGCAATCCTGAGCCAAATCCTTTTTCCGAAAACAAAAAAAAAAGGGTGGGTGTAGAGACTCATGAAAGCTGTTCTAACAAATAGAGTTGACTACATTGTGTTAATAAAGGAATGAATCCTTCCATTGAAACTCTAGAAAAGATGAAAGATAAACGTTTTACCTACTGAAATACTATTTGATTACTGACAACGCGAATCTCTATTTTTTAGATTAATATTTTTATATTTATATAAAAAAATGATATAGCTTATTTTATAAGGAACAAAAACATTTCATTGGAAAAACTGAAATATACAAGGGGCTAAAGTCAAGGGAACTCCAAAAAGTTTCTCCTATTGCGATTAATGGTGCTTAGAGAATAGTCAGAATAGGAAGAGTATAAAATGCACCTAGAAGAAGAGACAAAAACTACTGTATCACAAAACTATCAAGAGCTCTATCAATCCCCTGGAGATTCTGTTGCTTCAGATGAGAGTTTCCTTGGCCAATAGATTAGGTACGTATTTTCCAGTTGAGAGGGGCATTGTTTACTGTAACCTATTGGCGTCTGGTTAATTTAGTTTGATCTTTTATGTTAAGCTTTTCTATGAACAACATTCATTACATTTGAGGGGATTACTTTTTGTTGAAACTCTTGAGACTTGCACAATTTTTCTGGGATGCCTTGATGCCTGAAAGGTGATGACAAGAAGATCAAGCACTAACTTTATGAAGTTCTCCAACAATAATGTCACTTATCACGATTTAGTCTGGAATTTAATGTTGCAAGTTATGCTAGCCTGCTTGATCATATACTTCCCAAGACAATTATTATATTATTAGCTCACGGACTCTTTTTTATACAAATGTTCCATTGTGGGGTGCTTTGAGATTGTTACCTAATTTTGTGATTGGCATCTGGAAGATAAACTCTAGAATGCTTAGCTTAGTTGTTCATCATTTTCTTGACAGACAAAGACTAATACGCCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAGGTATACTATTTGTCGAATGGAAATGGGGCGGAAATGCGGTGGCTGCTACCATTTATGCGGTGACATGACACCAATGGGGCAAATATCCTCCCTCACAGCACTTATCTCACGTTCAGTTCACATTGACTGCGGCACGGTACCATCGCTCAGTGCTTATGCAGATTTCTTCCTTCGGAATTGGATTTTTTAACCCTCACAACATGCGACTTGTTGATGATGATAGGCTTGCTGGC
mRNA sequence
ATGTTGCGGTCAATTCTCAGAGCAACCGCCGCAGCCTCAAAACACCACCTCTGCAATCGGAATCACTCTCCGATCCTATCACTTACTTCAAATTACTCTGCTAAGACCACCAAATCCACCGTTAAGAAGGCCAAGAAAGGTAAGTCCAAGGCCGACGCCAAAGCCGCCGATGATCCCTCCGCCTCGGCTGCTGCTTCCGACGACTTAGATGCGGCACTTTCTGATGATAAATCCCGCGCCCGCCGTCTCGCTGCTGAGGAAAATGATCCCTCACTCGATGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCCTCGCTCTCACAGGTCACTCGCAAGGATACCTGCACTTATTTCAAATTCAATATGGAAGAACTAAATGAGGTACTGCCGGAGGGATTGCCTTTGGGAATGATCAAGGAGTTCGAGGGGTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAGTTTCTTGGATCTCCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCGGTCACCGGATGGTTCAAAAATTAGAAAACAGATTGTATTGGATGGTCCGGTTAATTGTGGAAAGAGTATTACGCTGGCCATGCTCGTTAACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTACGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAGAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTCTGAAGTTCAATGAGACCCGCTTAAGACAATTGCCATGTCAAATATCTGAACCTATACCTTTGGGAGAGGGTGTTGGTGTTGGCCTGATGAAAGGTGCTGATTCCATGACGATGCCTGAGGGTTCAAATTTATATGACTTAATTGATACTGGAATCAAGCACACCCATGCGGCGGTTGGGGTGGTTGTTCGTTTAAGAAAAGAATTATCACTTGTGAAAGATGTTCCTGTGCTAATCGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTCACTGTTCGTTCTACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAACGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTAGGAAAGCTTCGTCAAGACTTGCCAGATGTTCCTCTAGATGCACGTGTTAATTTCCCCCGCTACAGTCTTGATGAAGCGGCTTCTGTTTGCCACTATTACCTTAGACAAAGACTAATACGCCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAGCACTTATCTCACGTTCAGTTCACATTGACTGCGGCACGGTACCATCGCTCAGTGCTTATGCAGATTTCTTCCTTCGGAATTGGATTTTTTAACCCTCACAACATGCGACTTGTTGATGATGATAGGCTTGCTGGC
Coding sequence (CDS)
ATGTTGCGGTCAATTCTCAGAGCAACCGCCGCAGCCTCAAAACACCACCTCTGCAATCGGAATCACTCTCCGATCCTATCACTTACTTCAAATTACTCTGCTAAGACCACCAAATCCACCGTTAAGAAGGCCAAGAAAGGTAAGTCCAAGGCCGACGCCAAAGCCGCCGATGATCCCTCCGCCTCGGCTGCTGCTTCCGACGACTTAGATGCGGCACTTTCTGATGATAAATCCCGCGCCCGCCGTCTCGCTGCTGAGGAAAATGATCCCTCACTCGATGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCCTCGCTCTCACAGGTCACTCGCAAGGATACCTGCACTTATTTCAAATTCAATATGGAAGAACTAAATGAGGTACTGCCGGAGGGATTGCCTTTGGGAATGATCAAGGAGTTCGAGGGGTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAGTTTCTTGGATCTCCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCGGTCACCGGATGGTTCAAAAATTAGAAAACAGATTGTATTGGATGGTCCGGTTAATTGTGGAAAGAGTATTACGCTGGCCATGCTCGTTAACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTACGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAGAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTCTGAAGTTCAATGAGACCCGCTTAAGACAATTGCCATGTCAAATATCTGAACCTATACCTTTGGGAGAGGGTGTTGGTGTTGGCCTGATGAAAGGTGCTGATTCCATGACGATGCCTGAGGGTTCAAATTTATATGACTTAATTGATACTGGAATCAAGCACACCCATGCGGCGGTTGGGGTGGTTGTTCGTTTAAGAAAAGAATTATCACTTGTGAAAGATGTTCCTGTGCTAATCGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTCACTGTTCGTTCTACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAACGCTTTTAGGTCTATGATGCATGACGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTAGGAAAGCTTCGTCAAGACTTGCCAGATGTTCCTCTAGATGCACGTGTTAATTTCCCCCGCTACAGTCTTGATGAAGCGGCTTCTGTTTGCCACTATTACCTTAGACAAAGACTAATACGCCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAGCACTTATCTCACGTTCAGTTCACATTGACTGCGGCACGGTACCATCGCTCAGTGCTTATGCAGATTTCTTCCTTCGGAATTGGATTTTTTAACCCTCACAACATGCGACTTGTTGATGATGATAGGCTTGCTGGC
Protein sequence
MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPSASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYFKFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKIRKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPVQAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQRLIRREAFSEDAWKKHLSHVQFTLTAARYHRSVLMQISSFGIGFFNPHNMRLVDDDRLAG
Homology
BLAST of Sgr015890 vs. NCBI nr
Match:
XP_022154896.1 (28S ribosomal protein S29, mitochondrial [Momordica charantia])
HSP 1 Score: 804.7 bits (2077), Expect = 4.4e-229
Identity = 403/435 (92.64%), Postives = 419/435 (96.32%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
MLRS+LRA AAASKHHLCNRN SPILSL+SNYSAKT KSTVKK KKGKS ADAKAADDPS
Sbjct: 1 MLRSVLRAAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAADDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
A+AAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQ+TRKD+ TYF
Sbjct: 61 ATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
KFNME LNEVLPEGLPLGM+KEFE SMRSAVLVR+SFL+LRDNFRRVVDPSLRSPDG KI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGLKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKS LAMLV+WARDEGWLV YVPSGRRWTHGGFFF+NPQTGLWDTP+
Sbjct: 181 RKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPI 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDFLK+NETRLRQLPCQISEPIPLGEGVGVG+MKGADSMTMPEGS LYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTHAAVGVV+RLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELA
Sbjct: 301 IKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAF+EDAWKK
Sbjct: 421 RLIRREAFTEDAWKK 435
BLAST of Sgr015890 vs. NCBI nr
Match:
XP_038895729.1 (28S ribosomal protein S29, mitochondrial [Benincasa hispida])
HSP 1 Score: 788.9 bits (2036), Expect = 2.5e-224
Identity = 400/435 (91.95%), Postives = 413/435 (94.94%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
MLRSIL+ATAAASK HLCNRN PILSLTSNYSAK TKS++KKAKKGKSKAD KA DD S
Sbjct: 1 MLRSILKATAAASKSHLCNRNPFPILSLTSNYSAKVTKSSIKKAKKGKSKADGKAGDDLS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
ASAAA+DDLDAALSDDKSRARRLAAEEND SLDVGPNGRPLFTSASSLSQ+TRKD TYF
Sbjct: 61 ASAAATDDLDAALSDDKSRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
KFNME LNEVLPEGLPLGM+KEFE SMRSAVLVRQSFLDLRDNFRRVVDPSL SP GSKI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKSI LAMLV+WARDEGWLV YVPSGRRWTHGGFFFRNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVL+DFLK+NET LRQLPCQISEPI LGEGVGVG+MKGADSMTMP+GS LYDLIDTG
Sbjct: 241 QAEDVLKDFLKYNETCLRQLPCQISEPILLGEGVGVGMMKGADSMTMPDGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTHAAVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL AR+NFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARLNFPRYSLDEAASVVHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAFSED WKK
Sbjct: 421 RLIRREAFSEDGWKK 435
BLAST of Sgr015890 vs. NCBI nr
Match:
XP_008457304.1 (PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1 28S ribosomal protein S29 [Cucumis melo var. makuwa] >TYJ97246.1 28S ribosomal protein S29 [Cucumis melo var. makuwa])
HSP 1 Score: 780.0 bits (2013), Expect = 1.2e-221
Identity = 395/435 (90.80%), Postives = 410/435 (94.25%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
MLRSILRATAAASKHH CNRN SPILS TSNYSAKTTK VKK KKGKS+ADAKA DDPS
Sbjct: 1 MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
AS AASD+LDAALSDDK+RARRLAAEEND SLDVGPNGRPLFTSASSLSQ+TRKD TYF
Sbjct: 61 AS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
KFNME LNEVLPEGLP+GM+KEFE S+RSAVLVRQSFLDLRDNFRRVVDPSL SP GSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKSI LAMLV+WAR+EGWLV YVPSGRRWTHGGFFF+NPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDFLK+NE RLRQLPCQISEPIPLGEGVGVG+ KGADSM MP+GS LYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTHAAVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAFSE+ WKK
Sbjct: 421 RLIRREAFSEEGWKK 434
BLAST of Sgr015890 vs. NCBI nr
Match:
XP_011657272.1 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypothetical protein Csa_023053 [Cucumis sativus])
HSP 1 Score: 778.5 bits (2009), Expect = 3.4e-221
Identity = 393/435 (90.34%), Postives = 408/435 (93.79%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
MLRSILRAT+AASKHH+CNRN +PILSLTSNYSAKTTK VKK KKGKS+ADAKA DDPS
Sbjct: 1 MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
ASAAASDDLDAALSDDK RARRLAAEEND SLDVGPNGRPLFTSASSLSQ+TRKD TYF
Sbjct: 61 ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
K+NME LNEVLPEGLP+GM+KEFE S+RSAVLVRQSFLDLRDNFRRVVDPSL SP GSKI
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKSI LAMLV WAR+EGWLV YVPSGRRWTHGGFFF+N QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDFLK+NE +LRQLPCQI EPIPLGEG GVG+ KGADSM MPEGS LYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTH AVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAFSEDAWKK
Sbjct: 421 RLIRREAFSEDAWKK 435
BLAST of Sgr015890 vs. NCBI nr
Match:
XP_004145300.3 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothetical protein Csa_023268 [Cucumis sativus])
HSP 1 Score: 778.1 bits (2008), Expect = 4.4e-221
Identity = 393/435 (90.34%), Postives = 407/435 (93.56%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
M+RSILRATAAASKHH NRN SPILSLTSNYSAKTTKS VKK KKGKS+ADAKA DDPS
Sbjct: 1 MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
A AAAS+DLDAALSDDK RARRLAAEEND SLDVGPNGRPLFTSASSLSQ+TRKD TYF
Sbjct: 61 APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
K NME LNEVLPEGLP+GM+KEFE S+RSAVLVRQSFLDLRDNFRRVVDPSL SP GSKI
Sbjct: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKSI LAMLV WAR+EGWLV YVPSGRRWTHGGFFF+NPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDF+K+NET+LRQLPCQISEPIPLGEG GVG+ KGADSM MPEGS LYDLIDTG
Sbjct: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTH AVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAFSED WKK
Sbjct: 421 RLIRREAFSEDGWKK 435
BLAST of Sgr015890 vs. ExPASy TrEMBL
Match:
A0A6J1DQ31 (28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022041 PE=3 SV=1)
HSP 1 Score: 804.7 bits (2077), Expect = 2.1e-229
Identity = 403/435 (92.64%), Postives = 419/435 (96.32%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
MLRS+LRA AAASKHHLCNRN SPILSL+SNYSAKT KSTVKK KKGKS ADAKAADDPS
Sbjct: 1 MLRSVLRAAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAADDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
A+AAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQ+TRKD+ TYF
Sbjct: 61 ATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
KFNME LNEVLPEGLPLGM+KEFE SMRSAVLVR+SFL+LRDNFRRVVDPSLRSPDG KI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGLKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKS LAMLV+WARDEGWLV YVPSGRRWTHGGFFF+NPQTGLWDTP+
Sbjct: 181 RKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPI 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDFLK+NETRLRQLPCQISEPIPLGEGVGVG+MKGADSMTMPEGS LYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTHAAVGVV+RLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELA
Sbjct: 301 IKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAF+EDAWKK
Sbjct: 421 RLIRREAFTEDAWKK 435
BLAST of Sgr015890 vs. ExPASy TrEMBL
Match:
A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1)
HSP 1 Score: 780.0 bits (2013), Expect = 5.6e-222
Identity = 395/435 (90.80%), Postives = 410/435 (94.25%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
MLRSILRATAAASKHH CNRN SPILS TSNYSAKTTK VKK KKGKS+ADAKA DDPS
Sbjct: 1 MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
AS AASD+LDAALSDDK+RARRLAAEEND SLDVGPNGRPLFTSASSLSQ+TRKD TYF
Sbjct: 61 AS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
KFNME LNEVLPEGLP+GM+KEFE S+RSAVLVRQSFLDLRDNFRRVVDPSL SP GSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKSI LAMLV+WAR+EGWLV YVPSGRRWTHGGFFF+NPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDFLK+NE RLRQLPCQISEPIPLGEGVGVG+ KGADSM MP+GS LYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTHAAVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAFSE+ WKK
Sbjct: 421 RLIRREAFSEEGWKK 434
BLAST of Sgr015890 vs. ExPASy TrEMBL
Match:
A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1)
HSP 1 Score: 780.0 bits (2013), Expect = 5.6e-222
Identity = 395/435 (90.80%), Postives = 410/435 (94.25%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
MLRSILRATAAASKHH CNRN SPILS TSNYSAKTTK VKK KKGKS+ADAKA DDPS
Sbjct: 1 MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
AS AASD+LDAALSDDK+RARRLAAEEND SLDVGPNGRPLFTSASSLSQ+TRKD TYF
Sbjct: 61 AS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
KFNME LNEVLPEGLP+GM+KEFE S+RSAVLVRQSFLDLRDNFRRVVDPSL SP GSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKSI LAMLV+WAR+EGWLV YVPSGRRWTHGGFFF+NPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDFLK+NE RLRQLPCQISEPIPLGEGVGVG+ KGADSM MP+GS LYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTHAAVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAFSE+ WKK
Sbjct: 421 RLIRREAFSEEGWKK 434
BLAST of Sgr015890 vs. ExPASy TrEMBL
Match:
A0A0A0KG66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1)
HSP 1 Score: 778.5 bits (2009), Expect = 1.6e-221
Identity = 393/435 (90.34%), Postives = 408/435 (93.79%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
MLRSILRAT+AASKHH+CNRN +PILSLTSNYSAKTTK VKK KKGKS+ADAKA DDPS
Sbjct: 1 MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
ASAAASDDLDAALSDDK RARRLAAEEND SLDVGPNGRPLFTSASSLSQ+TRKD TYF
Sbjct: 61 ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
K+NME LNEVLPEGLP+GM+KEFE S+RSAVLVRQSFLDLRDNFRRVVDPSL SP GSKI
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKSI LAMLV WAR+EGWLV YVPSGRRWTHGGFFF+N QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDFLK+NE +LRQLPCQI EPIPLGEG GVG+ KGADSM MPEGS LYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTH AVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAFSEDAWKK
Sbjct: 421 RLIRREAFSEDAWKK 435
BLAST of Sgr015890 vs. ExPASy TrEMBL
Match:
A0A0A0LVC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1)
HSP 1 Score: 777.7 bits (2007), Expect = 2.8e-221
Identity = 393/435 (90.34%), Postives = 407/435 (93.56%), Query Frame = 0
Query: 1 MLRSILRATAAASKHHLCNRNHSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAADDPS 60
M+RSILRATAAASKHH NRN SPILSLTSNYSAKTTKS VKK KKGKS+ADAKA DDPS
Sbjct: 1 MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
Query: 61 ASAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQVTRKDTCTYF 120
A AAAS+DLDAALSDDK RARRLAAEEND SLDVGPNGRPLFTSASSLSQ+TRKD TYF
Sbjct: 61 APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
Query: 121 KFNMEELNEVLPEGLPLGMIKEFEGSMRSAVLVRQSFLDLRDNFRRVVDPSLRSPDGSKI 180
K NME LNEVLPEGLP+GM+KEFE S+RSAVLVRQSFLDLRDNFRRVVDPSL SP GSKI
Sbjct: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
Query: 181 RKQIVLDGPVNCGKSITLAMLVNWARDEGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPV 240
RKQIVLDGPVNCGKSI LAMLV WAR+EGWLV YVPSGRRWTHGGFFF+NPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
Query: 241 QAEDVLRDFLKFNETRLRQLPCQISEPIPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTG 300
QAEDVLRDF+K+NET+LRQLPCQISEPIPLGEG GVG+ KGADSM MPEGS LYDLIDTG
Sbjct: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
Query: 301 IKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
IKHTH AVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
Query: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQ 420
MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
Query: 421 RLIRREAFSEDAWKK 436
RLIRREAFSED WKK
Sbjct: 421 RLIRREAFSEDGWKK 435
BLAST of Sgr015890 vs. TAIR 10
Match:
AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related )
HSP 1 Score: 545.0 bits (1403), Expect = 5.9e-155
Identity = 273/408 (66.91%), Postives = 323/408 (79.17%), Query Frame = 0
Query: 33 SAKTTKSTVKKAKKGKSKADAKAADDPSASAAASDDLDAALSDD--KSRARRLAAEENDP 92
S+K+TKS++ K KK + K DP A+ A + AA DD RA+RLA +E P
Sbjct: 53 SSKSTKSSITKTKKSEGKKSKPKGGDPGAAGAEEGEFGAAGGDDLEAGRAKRLADDEKIP 112
Query: 93 SLDVGPNGRPLFT-SASSLSQVTRKDTCTYFKFNMEELNEVLPEGLPLGMIKEFEGSMRS 152
SLDVGPNGRPLFT ++LSQ+T KD +YFKF+ L VLPEGL G+ EF S R
Sbjct: 113 SLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFNESWRP 172
Query: 153 AVLVRQSFLDLRDNFRRVVDPSLRSPD--GSKIRKQIVLDGPVNCGKSITLAMLVNWARD 212
A+LVR+S+L LRDNFRR+ DP + D G K++KQIVLDGPV CGKSI LAMLV+WARD
Sbjct: 173 ALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSIALAMLVHWARD 232
Query: 213 EGWLVFYVPSGRRWTHGGFFFRNPQTGLWDTPVQAEDVLRDFLKFNETRLRQLPCQISEP 272
EGWLV Y P GR WTHGG+F++NP TG WDTP+QAE++L+DF+KFNE+RLR+L C+I +P
Sbjct: 233 EGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPLQAENILKDFVKFNESRLRELRCKIHDP 292
Query: 273 IPLGEGVGVGLMKGADSMTMPEGSNLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDVPVL 332
I LGEG GVG +KGAD+M +PE S LYDL+ GIK THAAV VVVRLRKELS+VKDVPVL
Sbjct: 293 IVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVKDVPVL 352
Query: 333 IAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVNAFRSMMHDDMMVGAFSHSTAVGKL 392
I IDQYN+WFTFSE+EEPVT RS RPIHAREL VNAFRSMMH+DMMVGAFSHSTAVGKL
Sbjct: 353 IVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHSTAVGKL 412
Query: 393 RQDLPDVPLDARVNFPRYSLDEAASVCHYYLRQRLIRREAFSEDAWKK 436
R+DLPDVP+DAR FPRYSLDEA +VC+YYLRQRL+RRE F+E+ WKK
Sbjct: 413 RKDLPDVPVDARQQFPRYSLDEAEAVCYYYLRQRLVRREVFNEENWKK 460
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022154896.1 | 4.4e-229 | 92.64 | 28S ribosomal protein S29, mitochondrial [Momordica charantia] | [more] |
XP_038895729.1 | 2.5e-224 | 91.95 | 28S ribosomal protein S29, mitochondrial [Benincasa hispida] | [more] |
XP_008457304.1 | 1.2e-221 | 90.80 | PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1... | [more] |
XP_011657272.1 | 3.4e-221 | 90.34 | 28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypotheti... | [more] |
XP_004145300.3 | 4.4e-221 | 90.34 | 28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothe... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DQ31 | 2.1e-229 | 92.64 | 28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11... | [more] |
A0A5A7UZA8 | 5.6e-222 | 90.80 | 28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A1S3C6G8 | 5.6e-222 | 90.80 | 28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026... | [more] |
A0A0A0KG66 | 1.6e-221 | 90.34 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1 | [more] |
A0A0A0LVC2 | 2.8e-221 | 90.34 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G16870.1 | 5.9e-155 | 66.91 | mitochondrial 28S ribosomal protein S29-related | [more] |