Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAGATGGGCGATTACGAATCACCTTATTGGCAAGATGATCAAATCTCCTTCATGCCAGACATTGATTCTCCAAAGCAAATCTCTCATCCTTTTGCCTCATCTCCCCGCCGTCACCCCTGCAAGCAAGAGGTTGATCATCTTCACTTCGCCATGTTCGATGACGCTTTCCCTCAGCTCCCTCAAAGCCCCGAGCTTACCTCCGACGTCCCGTCGTGCAGCTACAATCTCCGAGCGAACGCCCCCTCCCCATCCCAAACATTCTCTCATTCTGTACATAGCCAGCTGATGGATTGGCGAGCCATGGACCGATACGTCGCGTCTCAGCTCAGCGTCGATAAGGATGATAGTGGAAGAGAAGCAAATTACTCTGAAGCTGCAAGGTTTCATGTGCCTGAAGGCACCAAATATGCAAGTGAATGA
mRNA sequence
ATGCAAAAGATGGGCGATTACGAATCACCTTATTGGCAAGATGATCAAATCTCCTTCATGCCAGACATTGATTCTCCAAAGCAAATCTCTCATCCTTTTGCCTCATCTCCCCGCCGTCACCCCTGCAAGCAAGAGGTTGATCATCTTCACTTCGCCATGTTCGATGACGCTTTCCCTCAGCTCCCTCAAAGCCCCGAGCTTACCTCCGACGTCCCGTCGTGCAGCTACAATCTCCGAGCGAACGCCCCCTCCCCATCCCAAACATTCTCTCATTCTGTACATAGCCAGCTGATGGATTGGCGAGCCATGGACCGATACGTCGCGTCTCAGCTCAGCGTCGATAAGGATGATAGTGGAAGAGAAGCAAATTACTCTGAAGCTGCAAGGTTTCATGTGCCTGAAGGCACCAAATATGCAAGTGAATGA
Coding sequence (CDS)
ATGCAAAAGATGGGCGATTACGAATCACCTTATTGGCAAGATGATCAAATCTCCTTCATGCCAGACATTGATTCTCCAAAGCAAATCTCTCATCCTTTTGCCTCATCTCCCCGCCGTCACCCCTGCAAGCAAGAGGTTGATCATCTTCACTTCGCCATGTTCGATGACGCTTTCCCTCAGCTCCCTCAAAGCCCCGAGCTTACCTCCGACGTCCCGTCGTGCAGCTACAATCTCCGAGCGAACGCCCCCTCCCCATCCCAAACATTCTCTCATTCTGTACATAGCCAGCTGATGGATTGGCGAGCCATGGACCGATACGTCGCGTCTCAGCTCAGCGTCGATAAGGATGATAGTGGAAGAGAAGCAAATTACTCTGAAGCTGCAAGGTTTCATGTGCCTGAAGGCACCAAATATGCAAGTGAATGA
Protein sequence
MQKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVDHLHFAMFDDAFPQLPQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKDDSGREANYSEAARFHVPEGTKYASE
Homology
BLAST of Sgr015510 vs. NCBI nr
Match:
XP_022154040.1 (NAC domain-containing protein 26-like [Momordica charantia])
HSP 1 Score: 181.4 bits (459), Expect = 5.4e-42
Identity = 109/148 (73.65%), Postives = 116/148 (78.38%), Query Frame = 0
Query: 1 MQKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVD-HLHFAMFD-DAF 60
MQKMGDYESPYWQDDQISFMPDIDSPKQIS HPCKQEVD HLHF MFD DAF
Sbjct: 164 MQKMGDYESPYWQDDQISFMPDIDSPKQIS---------HPCKQEVDHHLHFPMFDNDAF 223
Query: 61 -PQLPQSPELTSDVPSCSYNL-RANAPSPS-QTFSHSVHSQLMDWRAMDRYVASQLSVDK 120
PQ Q PELTS+VPSCSY+L R NAPS S QTFSH++ QLMDWRAMDRYVASQLS+D+
Sbjct: 224 APQ--QXPELTSNVPSCSYDLQRPNAPSLSTQTFSHALDYQLMDWRAMDRYVASQLSIDR 283
Query: 121 DDSGR--EANYSEAARFHVPEGTKYASE 142
D+ GR EANYSE EGTKYASE
Sbjct: 284 DNHGRDQEANYSE-------EGTKYASE 293
BLAST of Sgr015510 vs. NCBI nr
Match:
XP_022943959.1 (NAC domain-containing protein 26-like [Cucurbita moschata])
HSP 1 Score: 181.4 bits (459), Expect = 5.4e-42
Identity = 97/142 (68.31%), Postives = 107/142 (75.35%), Query Frame = 0
Query: 2 QKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVDHLHFAMFDDAFPQL 61
QKMGDYESPYWQDDQISFMP IDSP QIS HPCK E+DHLHFA+FDDAFPQL
Sbjct: 164 QKMGDYESPYWQDDQISFMPQIDSPNQIS---------HPCKHEIDHLHFAVFDDAFPQL 223
Query: 62 PQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKDD-SGR 121
P+ EL SD+ SCSY+ R+NAPS SQTF H V ++LMDW+AMDRYVASQLS D+DD GR
Sbjct: 224 PRHLELNSDMSSCSYDPRSNAPSSSQTFFHGVDNKLMDWQAMDRYVASQLSTDRDDHHGR 283
Query: 122 -EANYSEAARFHVPEGTKYASE 142
EANYS TKYASE
Sbjct: 284 DEANYSHP--------TKYASE 288
BLAST of Sgr015510 vs. NCBI nr
Match:
KAG6596842.1 (Hsp70-Hsp90 organizing protein 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 181.4 bits (459), Expect = 5.4e-42
Identity = 97/142 (68.31%), Postives = 107/142 (75.35%), Query Frame = 0
Query: 2 QKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVDHLHFAMFDDAFPQL 61
QKMGDYESPYWQDDQISFMP IDSP QIS HPCK E+DHLHFA+FDDAFPQL
Sbjct: 923 QKMGDYESPYWQDDQISFMPQIDSPNQIS---------HPCKHEIDHLHFAVFDDAFPQL 982
Query: 62 PQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKDD-SGR 121
P+ EL SD+ SCSY+ R+NAPS SQTF H V ++LMDW+AMDRYVASQLS D+DD GR
Sbjct: 983 PRHLELNSDMSSCSYDPRSNAPSSSQTFFHGVDNKLMDWQAMDRYVASQLSTDRDDHHGR 1042
Query: 122 -EANYSEAARFHVPEGTKYASE 142
EANYS TKYASE
Sbjct: 1043 DEANYSHP--------TKYASE 1047
BLAST of Sgr015510 vs. NCBI nr
Match:
KAG7028371.1 (NAC domain-containing protein 26, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 179.5 bits (454), Expect = 2.0e-41
Identity = 96/142 (67.61%), Postives = 106/142 (74.65%), Query Frame = 0
Query: 2 QKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVDHLHFAMFDDAFPQL 61
QKMGDYESPYWQDDQISFMP IDSP QIS HPCK E+DHLHF +FDDAFPQL
Sbjct: 190 QKMGDYESPYWQDDQISFMPQIDSPNQIS---------HPCKHEIDHLHFPVFDDAFPQL 249
Query: 62 PQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKDD-SGR 121
P+ EL SD+ SCSY+ R+NAPS SQTF H V ++LMDW+AMDRYVASQLS D+DD GR
Sbjct: 250 PRHLELNSDMSSCSYDPRSNAPSSSQTFFHGVDNKLMDWQAMDRYVASQLSTDRDDHHGR 309
Query: 122 -EANYSEAARFHVPEGTKYASE 142
EANYS TKYASE
Sbjct: 310 DEANYSHP--------TKYASE 314
BLAST of Sgr015510 vs. NCBI nr
Match:
XP_023005500.1 (NAC domain-containing protein 26-like [Cucurbita maxima])
HSP 1 Score: 179.1 bits (453), Expect = 2.7e-41
Identity = 94/140 (67.14%), Postives = 104/140 (74.29%), Query Frame = 0
Query: 2 QKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVDHLHFAMFDDAFPQL 61
QKMGDYESPYWQDDQISFMP IDSP QIS HPCK E+DHLHFA+FDDAFPQL
Sbjct: 164 QKMGDYESPYWQDDQISFMPQIDSPNQIS---------HPCKHEIDHLHFAVFDDAFPQL 223
Query: 62 PQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKDDSGRE 121
P+ EL SD+ SCSY+ R+NAPS SQTF H V ++LMDW+AMDRYVASQLS D+D E
Sbjct: 224 PRHLELNSDMSSCSYDPRSNAPSSSQTFFHGVDNKLMDWQAMDRYVASQLSTDRD----E 282
Query: 122 ANYSEAARFHVPEGTKYASE 142
ANYS TKYASE
Sbjct: 284 ANYSHP--------TKYASE 282
BLAST of Sgr015510 vs. ExPASy Swiss-Prot
Match:
F4HYV5 (NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 SV=1)
HSP 1 Score: 45.1 bits (105), Expect = 7.9e-04
Identity = 48/171 (28.07%), Postives = 70/171 (40.94%), Query Frame = 0
Query: 1 MQKMGDYE---SPYWQDDQISFMPD---IDSPKQI------------------SHPFASS 60
++KMGDY S +W DDQ+SFM SP+Q + F ++
Sbjct: 162 VRKMGDYHSSPSQHWYDDQLSFMASEIISSSPRQFLPNHHYNRHHHQQTLPCGLNAFNNN 221
Query: 61 PRRHPCKQEVDHLHFAMF-----------DDAFPQLPQSPELTSDVPSCSYNLRANAPS- 117
CKQE++ LH+ + F QLPQ TS+ S + N N +
Sbjct: 222 NPNLQCKQELE-LHYNQMVQHQQQNHHLRESMFLQLPQLESPTSNCNSDNNNNTRNISNL 281
BLAST of Sgr015510 vs. ExPASy TrEMBL
Match:
A0A6J1DII3 (NAC domain-containing protein 26-like OS=Momordica charantia OX=3673 GN=LOC111021394 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 2.6e-42
Identity = 109/148 (73.65%), Postives = 116/148 (78.38%), Query Frame = 0
Query: 1 MQKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVD-HLHFAMFD-DAF 60
MQKMGDYESPYWQDDQISFMPDIDSPKQIS HPCKQEVD HLHF MFD DAF
Sbjct: 164 MQKMGDYESPYWQDDQISFMPDIDSPKQIS---------HPCKQEVDHHLHFPMFDNDAF 223
Query: 61 -PQLPQSPELTSDVPSCSYNL-RANAPSPS-QTFSHSVHSQLMDWRAMDRYVASQLSVDK 120
PQ Q PELTS+VPSCSY+L R NAPS S QTFSH++ QLMDWRAMDRYVASQLS+D+
Sbjct: 224 APQ--QXPELTSNVPSCSYDLQRPNAPSLSTQTFSHALDYQLMDWRAMDRYVASQLSIDR 283
Query: 121 DDSGR--EANYSEAARFHVPEGTKYASE 142
D+ GR EANYSE EGTKYASE
Sbjct: 284 DNHGRDQEANYSE-------EGTKYASE 293
BLAST of Sgr015510 vs. ExPASy TrEMBL
Match:
A0A6J1FVP0 (NAC domain-containing protein 26-like OS=Cucurbita moschata OX=3662 GN=LOC111448526 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 2.6e-42
Identity = 97/142 (68.31%), Postives = 107/142 (75.35%), Query Frame = 0
Query: 2 QKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVDHLHFAMFDDAFPQL 61
QKMGDYESPYWQDDQISFMP IDSP QIS HPCK E+DHLHFA+FDDAFPQL
Sbjct: 164 QKMGDYESPYWQDDQISFMPQIDSPNQIS---------HPCKHEIDHLHFAVFDDAFPQL 223
Query: 62 PQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKDD-SGR 121
P+ EL SD+ SCSY+ R+NAPS SQTF H V ++LMDW+AMDRYVASQLS D+DD GR
Sbjct: 224 PRHLELNSDMSSCSYDPRSNAPSSSQTFFHGVDNKLMDWQAMDRYVASQLSTDRDDHHGR 283
Query: 122 -EANYSEAARFHVPEGTKYASE 142
EANYS TKYASE
Sbjct: 284 DEANYSHP--------TKYASE 288
BLAST of Sgr015510 vs. ExPASy TrEMBL
Match:
A0A6J1KXK0 (NAC domain-containing protein 26-like OS=Cucurbita maxima OX=3661 GN=LOC111498466 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 94/140 (67.14%), Postives = 104/140 (74.29%), Query Frame = 0
Query: 2 QKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVDHLHFAMFDDAFPQL 61
QKMGDYESPYWQDDQISFMP IDSP QIS HPCK E+DHLHFA+FDDAFPQL
Sbjct: 164 QKMGDYESPYWQDDQISFMPQIDSPNQIS---------HPCKHEIDHLHFAVFDDAFPQL 223
Query: 62 PQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKDDSGRE 121
P+ EL SD+ SCSY+ R+NAPS SQTF H V ++LMDW+AMDRYVASQLS D+D E
Sbjct: 224 PRHLELNSDMSSCSYDPRSNAPSSSQTFFHGVDNKLMDWQAMDRYVASQLSTDRD----E 282
Query: 122 ANYSEAARFHVPEGTKYASE 142
ANYS TKYASE
Sbjct: 284 ANYSHP--------TKYASE 282
BLAST of Sgr015510 vs. ExPASy TrEMBL
Match:
A0A345BTE4 (NAC7 OS=Cucurbita pepo OX=3663 PE=2 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 6.4e-41
Identity = 95/142 (66.90%), Postives = 105/142 (73.94%), Query Frame = 0
Query: 2 QKMGDYESPYWQDDQISFMPDIDSPKQISHPFASSPRRHPCKQEVDHLHFAMFDDAFPQL 61
QKMGDYESPYWQDDQISFMP IDSP QIS PCK E+DHLHF +FDDAFPQL
Sbjct: 164 QKMGDYESPYWQDDQISFMPQIDSPNQIS---------QPCKHEIDHLHFTVFDDAFPQL 223
Query: 62 PQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKDD-SGR 121
P+ EL SD+ SCSY+ R+NAPS SQTF H V ++LMDW+AMDRYVASQLS D+DD GR
Sbjct: 224 PRHLELNSDMSSCSYDPRSNAPSSSQTFFHGVDNKLMDWQAMDRYVASQLSTDRDDHHGR 283
Query: 122 -EANYSEAARFHVPEGTKYASE 142
EANYS TKYASE
Sbjct: 284 DEANYSHP--------TKYASE 288
BLAST of Sgr015510 vs. ExPASy TrEMBL
Match:
A0A0A0L6Z7 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G034810 PE=4 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 3.3e-37
Identity = 97/148 (65.54%), Postives = 104/148 (70.27%), Query Frame = 0
Query: 1 MQKMGDYESPYWQD-DQISFMPDIDSPKQISHPFASSPRRHPCKQEVD---HLHFAMFDD 60
+QKMGDYESPYWQD DQISFMPDIDSP QIS H CK EVD HLHFAMFD+
Sbjct: 163 IQKMGDYESPYWQDHDQISFMPDIDSPNQIS---------HLCKHEVDDHHHLHFAMFDN 222
Query: 61 AFPQLPQSPELTSDVPSCSYNLRANAPSPSQTFSHSVHSQLMDWRAMDRYVASQLSVDKD 120
A QLP+ PEL SDV S SY+LRANAPS SQTF H+ SQ MDWRAMDR+VASQLS D+D
Sbjct: 223 ASLQLPRRPELISDVSSSSYDLRANAPSSSQTFFHAFDSQSMDWRAMDRFVASQLSADRD 282
Query: 121 DSGR---EANYSEAARFHVPEGTKYASE 142
D R EA YS E TKY SE
Sbjct: 283 DDHRREEEAIYS--------EDTKYTSE 293
BLAST of Sgr015510 vs. TAIR 10
Match:
AT1G62700.1 (Arabidopsis NAC domain containing protein 26 )
HSP 1 Score: 45.1 bits (105), Expect = 5.6e-05
Identity = 48/171 (28.07%), Postives = 70/171 (40.94%), Query Frame = 0
Query: 1 MQKMGDYE---SPYWQDDQISFMPD---IDSPKQI------------------SHPFASS 60
++KMGDY S +W DDQ+SFM SP+Q + F ++
Sbjct: 162 VRKMGDYHSSPSQHWYDDQLSFMASEIISSSPRQFLPNHHYNRHHHQQTLPCGLNAFNNN 221
Query: 61 PRRHPCKQEVDHLHFAMF-----------DDAFPQLPQSPELTSDVPSCSYNLRANAPS- 117
CKQE++ LH+ + F QLPQ TS+ S + N N +
Sbjct: 222 NPNLQCKQELE-LHYNQMVQHQQQNHHLRESMFLQLPQLESPTSNCNSDNNNNTRNISNL 281
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022154040.1 | 5.4e-42 | 73.65 | NAC domain-containing protein 26-like [Momordica charantia] | [more] |
| XP_022943959.1 | 5.4e-42 | 68.31 | NAC domain-containing protein 26-like [Cucurbita moschata] | [more] |
| KAG6596842.1 | 5.4e-42 | 68.31 | Hsp70-Hsp90 organizing protein 1, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
| KAG7028371.1 | 2.0e-41 | 67.61 | NAC domain-containing protein 26, partial [Cucurbita argyrosperma subsp. argyros... | [more] |
| XP_023005500.1 | 2.7e-41 | 67.14 | NAC domain-containing protein 26-like [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| F4HYV5 | 7.9e-04 | 28.07 | NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DII3 | 2.6e-42 | 73.65 | NAC domain-containing protein 26-like OS=Momordica charantia OX=3673 GN=LOC11102... | [more] |
| A0A6J1FVP0 | 2.6e-42 | 68.31 | NAC domain-containing protein 26-like OS=Cucurbita moschata OX=3662 GN=LOC111448... | [more] |
| A0A6J1KXK0 | 1.3e-41 | 67.14 | NAC domain-containing protein 26-like OS=Cucurbita maxima OX=3661 GN=LOC11149846... | [more] |
| A0A345BTE4 | 6.4e-41 | 66.90 | NAC7 OS=Cucurbita pepo OX=3663 PE=2 SV=1 | [more] |
| A0A0A0L6Z7 | 3.3e-37 | 65.54 | NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G034810 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G62700.1 | 5.6e-05 | 28.07 | Arabidopsis NAC domain containing protein 26 | [more] |
