Sgr015254 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr015254
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00003412: 113989 .. 114492 (-)
RNA-Seq ExpressionSgr015254
SyntenySgr015254
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTCAGAACACTATCAACGAGTGGAGCCGACAAGCCTAGCACCAACTCGGTCAAGCCTCTTTACCGATGCCACGGCTTTCAAATTCCCCTCCTTCAAAAACGCCATAACCATCCTCTCACCGATCTCCTTCCCCCTCTCCTCATTGTCGATCACCGCTACCGCCGTCGGCCCCGCCCCACTTATCGTACACCCGAATGCCCCCGCCGCAATCGCCGCTTTCTTCACGCCATCCATCCCTGGAATCAGTGGCGATCGCCGTGGCTCCACAATTTTGTCCGACGACAATGCCTTGCCCAGCCCCATCAAGTCGCCTTGCAGCACCGCCGCCACCAACGCCCCTGCTTGGCTGCAATTCCATACGTGGTGCGGCATCCCAACTTCAGCTGGCAATGCAGCGCGCATTTTCTTGGTTGGCGCTTCGAATTCCGGGCTCACCAATACGAAGAACAGCTCCTTCTCGATGGGGAACTTGAGGCGGATCAATTCCAAGGGTTCGTAA

mRNA sequence

ATGTTCTCAGAACACTATCAACGAGTGGAGCCGACAAGCCTAGCACCAACTCGGTCAAGCCTCTTTACCGATGCCACGGCTTTCAAATTCCCCTCCTTCAAAAACGCCATAACCATCCTCTCACCGATCTCCTTCCCCCTCTCCTCATTGTCGATCACCGCTACCGCCGTCGGCCCCGCCCCACTTATCGTACACCCGAATGCCCCCGCCGCAATCGCCGCTTTCTTCACGCCATCCATCCCTGGAATCAGTGGCGATCGCCGTGGCTCCACAATTTTGTCCGACGACAATGCCTTGCCCAGCCCCATCAAGTCGCCTTGCAGCACCGCCGCCACCAACGCCCCTGCTTGGCTGCAATTCCATACGTGGTGCGGCATCCCAACTTCAGCTGGCAATGCAGCGCGCATTTTCTTGGTTGGCGCTTCGAATTCCGGGCTCACCAATACGAAGAACAGCTCCTTCTCGATGGGGAACTTGAGGCGGATCAATTCCAAGGGTTCGTAA

Coding sequence (CDS)

ATGTTCTCAGAACACTATCAACGAGTGGAGCCGACAAGCCTAGCACCAACTCGGTCAAGCCTCTTTACCGATGCCACGGCTTTCAAATTCCCCTCCTTCAAAAACGCCATAACCATCCTCTCACCGATCTCCTTCCCCCTCTCCTCATTGTCGATCACCGCTACCGCCGTCGGCCCCGCCCCACTTATCGTACACCCGAATGCCCCCGCCGCAATCGCCGCTTTCTTCACGCCATCCATCCCTGGAATCAGTGGCGATCGCCGTGGCTCCACAATTTTGTCCGACGACAATGCCTTGCCCAGCCCCATCAAGTCGCCTTGCAGCACCGCCGCCACCAACGCCCCTGCTTGGCTGCAATTCCATACGTGGTGCGGCATCCCAACTTCAGCTGGCAATGCAGCGCGCATTTTCTTGGTTGGCGCTTCGAATTCCGGGCTCACCAATACGAAGAACAGCTCCTTCTCGATGGGGAACTTGAGGCGGATCAATTCCAAGGGTTCGTAA

Protein sequence

MFSEHYQRVEPTSLAPTRSSLFTDATAFKFPSFKNAITILSPISFPLSSLSITATAVGPAPLIVHPNAPAAIAAFFTPSIPGISGDRRGSTILSDDNALPSPIKSPCSTAATNAPAWLQFHTWCGIPTSAGNAARIFLVGASNSGLTNTKNSSFSMGNLRRINSKGS
Homology
BLAST of Sgr015254 vs. NCBI nr
Match: KAG5624680.1 (hypothetical protein H5410_009898 [Solanum commersonii])

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-27
Identity = 75/105 (71.43%), Postives = 82/105 (78.10%), Query Frame = 0

Query: 12  TSLAPTRSSLFTDATAFKFPSFKNAITILSPISFPLSSLSITATAVGPAPLIVHPNAPAA 71
           TSLAP RSS FT A AF  P  + A TIL PIS P+SSLS+TATAVGPAPL+V P APA+
Sbjct: 6   TSLAPIRSSFFTIAKAFSLPCSRKASTILCPISLPVSSLSVTATAVGPAPLMVQPKAPAS 65

Query: 72  IAAFFTPSIPGISGDRRGSTILSDDNALPSPIKSPCSTAATNAPA 117
           IAAFFTPSIPGISG   GSTILS+D+ALP P   P ST ATNAPA
Sbjct: 66  IAAFFTPSIPGISGVLLGSTILSEDSALPKPDTFPSSTDATNAPA 110

BLAST of Sgr015254 vs. NCBI nr
Match: VVB10227.1 (unnamed protein product [Arabis nemorensis])

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-15
Identity = 51/72 (70.83%), Postives = 57/72 (79.17%), Query Frame = 0

Query: 13 SLAPTRSSLFTDATAFKFPSFKNAITILSPISFPLSSLSITATAVGPAPLIVHPNAPAAI 72
          SLAP  SS  T+A  FKFP+F NA  I+SPIS P S +SITATAVGPAPLIVHPNAPA+ 
Sbjct: 5  SLAPILSSFLTEAIEFKFPAFANASIIISPISSPFSVVSITATAVGPAPLIVHPNAPASK 64

Query: 73 AAFFTPSIPGIS 85
          A FFT SIPGI+
Sbjct: 65 AVFFTASIPGIN 76

BLAST of Sgr015254 vs. ExPASy TrEMBL
Match: A0A0A9F4I3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-24
Identity = 78/143 (54.55%), Postives = 92/143 (64.34%), Query Frame = 0

Query: 25  ATAFKFPSFKNAITILSPISFPLSSLSITATAVGPAPLIVHPNAPAAIAAFFTPSIPGIS 84
           A AF  P  +NA TIL   S PLSS SITATAVGPAPL+V P+APA+ AA  T ++PG+ 
Sbjct: 3   AVAFNLPPLQNAWTILRATSSPLSSPSITATAVGPAPLMVQPSAPASRAAALTAAMPGMR 62

Query: 85  GDRRGSTILSDDNALPSPIKSPCSTAATNAPAWLQFHTWCGIPTSAGNAARIFLVGASNS 144
           G   GST+ S+D A P    SPCSTAAT+A AWL+  T C   T  G+AARI LVGAS S
Sbjct: 63  GALVGSTMPSEDIAEPMTPASPCSTAATSAAAWLELRTCCWTATCLGSAARILLVGASKS 122

Query: 145 GLTNTKNSSFSMGNLRRINSKGS 168
           G+T TK      G    +  KGS
Sbjct: 123 GVTRTKWRRRQGGEESGMKWKGS 145

BLAST of Sgr015254 vs. ExPASy TrEMBL
Match: A0A565C9C6 (Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS20671 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 8.4e-16
Identity = 51/72 (70.83%), Postives = 57/72 (79.17%), Query Frame = 0

Query: 13 SLAPTRSSLFTDATAFKFPSFKNAITILSPISFPLSSLSITATAVGPAPLIVHPNAPAAI 72
          SLAP  SS  T+A  FKFP+F NA  I+SPIS P S +SITATAVGPAPLIVHPNAPA+ 
Sbjct: 5  SLAPILSSFLTEAIEFKFPAFANASIIISPISSPFSVVSITATAVGPAPLIVHPNAPASK 64

Query: 73 AAFFTPSIPGIS 85
          A FFT SIPGI+
Sbjct: 65 AVFFTASIPGIN 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG5624680.12.0e-2771.43hypothetical protein H5410_009898 [Solanum commersonii][more]
VVB10227.11.7e-1570.83unnamed protein product [Arabis nemorensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A9F4I31.7e-2454.55Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A565C9C68.4e-1670.83Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS20671 PE=4 SV... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr015254.1Sgr015254.1mRNA