Sgr015062 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr015062
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	protein LOW PSII ACCUMULATION 1, chloroplastic
Location	tig00002854: 376002 .. 378953 (-)
RNA-Seq Expression	Sgr015062
Synteny	Sgr015062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTATCAATGGCGAACGTTTCCTCCTGCAACAACATTGGTCGACCTCCACATTTTCCTCGCACTCGCAGCCATAACGCTCACAATTTCAAATTCTATCGCCGTATCTGCTGCCATGTTCATCGGAAGACGGTCTCGTTCACTTTTGGCCCTACTCTAGCCGAGGCGCTTTGTTCTCTGCAGCACACGAGACGGAATTTAGCCAACTTTACTTGCTCCGCTGCTGATAAACCGGAAATCAGGTTGTTCTCTCACTCTGTTATGATAGTGTTGGATGAAAAATCAATGGCTGATGATTTTAATTCAGCTTTTCCTTTTCGAAGAATATCCATTGAATCACCTCGTTTGGAATTTGTGGCTAACTAATCTTTTATTGCTCATTTCGGTAAAGAATATGCTATTTTGAATTCTATGTCAAAGCACTGGAAATTTAGCTGATTTGTTTCCAATGGCCGGCCTCTCAGAGGAAAGAACTCTAATGCAACTAATTGTGTCTGCATTTGCTTTTACTCGTTTGTTTTATGTTCTTTTTCTTTGTAAATTCGAGTGGCTGCATTTGTGGACGACCAAGTACCAAGATAAATTTGAAGAAACTACGAGCTTTCATCATCATGCCGGGCTTTTGTTTGAGTGTTTCCCTCTATTCCAAATTCAATATCTGAGTTGGTGACTTCTTCATATTATATTGCTTGAGCTACAAAGCTTGTCTGTGTTTCTTATATATGTTATATCTGATCGCAACTCGATTTGCATGCTCAATTCCATAAACAGTCAAGCAGTTCGATTGAAGCATAAAGGTTCCAATTAGAGCGACTGAATTTTGATTAGGACTATGACTTATCCTTTGATAAATATATGCATTATGATTACATTATGTAGCTGGTGTAGTCTGATTGGTTGTCTTCTAACCTATTGTGAAATGAGGCTTTGTGTGATCATATCTGGTTTTTTCTTAGTTCCACAGCCAAGATAAGAAGTGAAGTCCTCTCTCCTTTTCGATCTGTTCGGATGTTCTTTTATCTCGCTTTCATTGCCAGTGGTACGTTGGGAGGACTGATAGCAACCACTCAATTGCTTGCTGCATTAGCAAATTCAGCAAGAGCTGAAGAAGTCCCTAATATTCTAAAAGGACTTGGAATAGACTTCGGAGCTGTTGCTCTTTTCGCATTTCTTTATTTCAGAGAGAACAATGCGAAAAATGCTCAGTTGGCAAGACTGTCAAGAGAAGAAAGCCTTTCGAATCTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCTCTCAGCTCTCTGCGTGGGATTGCTCGTCTGGTAATTTGCGCTGGCCCTGAATCCTTTATCATGGAAGCTTTTAAATCAAGTGAACCTTTCACTGAACGACTTCTAGAACGGGGCGTATTAGTCATACCCTTTGCCACAGATGTCAGTTCACTGAAGTTTGAGTTTGATGAACGTGAAGAGATGAAGGAGATAACCACCAAAAGAAAAAGACTCTGGCGGTTGACTCCGGTTTACATGCCTGAGTGGTCAGCGTAAGTAATTATAATTATCATCCATTTTCACATTGTTGCCCTCGTCCTCCCCCATTCTCATTTTCCTTTTCCTGTGAACAATAGGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCTCCTCTGAGTCTCCTGTGTAAGTCGTCCTCCTTGTTAAACTTCGAATTTAAATTGATGAAGTAAAATGGTTGCTTTTTTATGCTTAAACTCCCACTCAAGTTGTGTTAATAAGTTTTTTCTCTTGTTTAGTTTTTTAATGAAATGTATTGGTTCATTAATCATAAGTTATTCAATTTGGAGCAAGCTGAAGATTCTCCATAGTTGGTATATCATGTAAGCTGCATAGAGAAAAAGAAGAGGAAAGTAAATTAACTTTTTGGCAGAATTCATGCCAAAGGCCCAAAACTAGTGCACATTACAGAAGTTAAGCAATGAATGTTTGTCATTCATAACTAGTTATGTTAATATTTGTTCTTGCAGGTATTTATCTCTGCGAATTGATGGCCGTGTTCGTGGTAGCGGTGTTGGTTATCCTCCTTGGAATGCTCTTGTTGCACAATTACCACCTGTAAAAGGACTATGGTCAGGTCTTCTAGATGGAATGGATGGGAGAGTTTTGTGAAGAAAAACACTTGCTCTTTCTTCTAAGTTAGTACTCTTTTACCATAACCTGTTGCCGTTGCATGCTTTTATATCTGCCATTCTACTGATTGAGATTTGAGACTGAACTTAAAAGTCTTCTCTGTGATCTCCTGTTGAGCTGGCACCAAATTTCCCATATCTGATTCAAGTCCTATTTAGTTTCAAGGAACTAGAGAATTAACTGTTTTAAGAAATAAGGTCAACAATGTTGTCACTTCAGTAATTTTGGACTTTTTTATACATAAACTTAATGTCAAAATAGACGGCAGAATCATGTCGTAAAATTCAACTTTTGCTAAGTTTCTTGCTCCAAACAGGAACATTTGTAGGCCACGGTAACGATTCCCCTTTTAGTTTTCTGTTTTTTAATTTATACTTGCTTCCTCGCAATTTCTTTGATATGTTTATCATCCTTCTTATAATCACATTTGAATTCTTAGTCTAATTTAAAAAAAACAAAAACAAGTTTTTAAAAACTTTTTTTTTTTAGTTTTTAAATTTTGACTTAGATTTTAAAAATATTTTTAAAAAATAGATAACAAAAGAAAGAAACACATAGGTGGAAGTAAGCTTAATTTTTAAAAACCAAAAAGCAAAAATAAAATAGTTATCAAACAAGGCGTACTAATCTGTTTTTGTTTTCAACCTTCTGCTTCCACAGGTTCTCTGGAATGGAGCTTCTCAAAGCCTTTACCATGGAGTGGAGCAAAGTTTTGCTATCATTTTCAGTCATCCAAGACAGCCACTGTAAAAGCTCAAACACCATTGTCACTGCTTGA

mRNA sequence

ATGGTGGTATCAATGGCGAACGTTTCCTCCTGCAACAACATTGGTCGACCTCCACATTTTCCTCGCACTCGCAGCCATAACGCTCACAATTTCAAATTCTATCGCCGTATCTGCTGCCATGTTCATCGGAAGACGGTCTCGTTCACTTTTGGCCCTACTCTAGCCGAGGCGCTTTGTTCTCTGCAGCACACGAGACGGAATTTAGCCAACTTTACTTGCTCCGCTGCTGATAAACCGGAAATCAGTTCCACAGCCAAGATAAGAAGTGAAGTCCTCTCTCCTTTTCGATCTGTTCGGATGTTCTTTTATCTCGCTTTCATTGCCAGTGGTACGTTGGGAGGACTGATAGCAACCACTCAATTGCTTGCTGCATTAGCAAATTCAGCAAGAGCTGAAGAAGTCCCTAATATTCTAAAAGGACTTGGAATAGACTTCGGAGCTGTTGCTCTTTTCGCATTTCTTTATTTCAGAGAGAACAATGCGAAAAATGCTCAGTTGGCAAGACTGTCAAGAGAAGAAAGCCTTTCGAATCTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCTCTCAGCTCTCTGCGTGGGATTGCTCGTCTGGTAATTTGCGCTGGCCCTGAATCCTTTATCATGGAAGCTTTTAAATCAAGTGAACCTTTCACTGAACGACTTCTAGAACGGGGCGTATTAGTCATACCCTTTGCCACAGATGTCAGTTCACTGAAGTTTGAGTTTGATGAACGTGAAGAGATGAAGGAGATAACCACCAAAAGAAAAAGACTCTGGCGGTTGACTCCGGTTTACATGCCTGAGTGGTCAGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCTCCTCTGAGTCTCCTGTGTATTTATCTCTGCGAATTGATGGCCGTGTTCGTGGTAGCGGTGTTGGTTATCCTCCTTGGAATGCTCTTGTTGCACAATTACCACCTGTAAAAGGACTATGGTTCTCTGGAATGGAGCTTCTCAAAGCCTTTACCATGGAGTGGAGCAAAGTTTTGCTATCATTTTCAGTCATCCAAGACAGCCACTGTAAAAGCTCAAACACCATTGTCACTGCTTGA

Coding sequence (CDS)

ATGGTGGTATCAATGGCGAACGTTTCCTCCTGCAACAACATTGGTCGACCTCCACATTTTCCTCGCACTCGCAGCCATAACGCTCACAATTTCAAATTCTATCGCCGTATCTGCTGCCATGTTCATCGGAAGACGGTCTCGTTCACTTTTGGCCCTACTCTAGCCGAGGCGCTTTGTTCTCTGCAGCACACGAGACGGAATTTAGCCAACTTTACTTGCTCCGCTGCTGATAAACCGGAAATCAGTTCCACAGCCAAGATAAGAAGTGAAGTCCTCTCTCCTTTTCGATCTGTTCGGATGTTCTTTTATCTCGCTTTCATTGCCAGTGGTACGTTGGGAGGACTGATAGCAACCACTCAATTGCTTGCTGCATTAGCAAATTCAGCAAGAGCTGAAGAAGTCCCTAATATTCTAAAAGGACTTGGAATAGACTTCGGAGCTGTTGCTCTTTTCGCATTTCTTTATTTCAGAGAGAACAATGCGAAAAATGCTCAGTTGGCAAGACTGTCAAGAGAAGAAAGCCTTTCGAATCTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCTCTCAGCTCTCTGCGTGGGATTGCTCGTCTGGTAATTTGCGCTGGCCCTGAATCCTTTATCATGGAAGCTTTTAAATCAAGTGAACCTTTCACTGAACGACTTCTAGAACGGGGCGTATTAGTCATACCCTTTGCCACAGATGTCAGTTCACTGAAGTTTGAGTTTGATGAACGTGAAGAGATGAAGGAGATAACCACCAAAAGAAAAAGACTCTGGCGGTTGACTCCGGTTTACATGCCTGAGTGGTCAGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCTCCTCTGAGTCTCCTGTGTATTTATCTCTGCGAATTGATGGCCGTGTTCGTGGTAGCGGTGTTGGTTATCCTCCTTGGAATGCTCTTGTTGCACAATTACCACCTGTAAAAGGACTATGGTTCTCTGGAATGGAGCTTCTCAAAGCCTTTACCATGGAGTGGAGCAAAGTTTTGCTATCATTTTCAGTCATCCAAGACAGCCACTGTAAAAGCTCAAACACCATTGTCACTGCTTGA

Protein sequence

MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQLLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSLKFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRVRGSGVGYPPWNALVAQLPPVKGLWFSGMELLKAFTMEWSKVLLSFSVIQDSHCKSSNTIVTA

Homology

[Close]

BLAST of Sgr015062 vs. NCBI nr
Match: XP_022131239.1 (protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia] >XP_022131240.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia])

HSP 1 Score: 575.9 bits (1483), Expect = 2.5e-160
Identity = 289/324 (89.20%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 1   MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCS 60
           MVVSMAN+SS NN G PPH PRTRSHNAHNFKFYR ICC VH KTV F+ GP+LAE+L  
Sbjct: 1   MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRX 60

Query: 61  LQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQ 120
           LQ  RRNLANFTCSAA+KPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIATTQ
Sbjct: 61  LQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQ 120

Query: 121 LLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180
           LLAALANS+RAE+VP+ILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL
Sbjct: 121 LLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180

Query: 181 RVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSL 240
           RVDQ+KVIPL SLRGIARLVICAGPESFIMEAF+SSEPFTE+LLERGV+V+PFATDVSSL
Sbjct: 181 RVDQSKVIPLXSLRGIARLVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSL 240

Query: 241 KFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRV 300
            FEFDERE++K++TTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVS+ESPVYLSLR+DGRV
Sbjct: 241 NFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV 300

Query: 301 RGSGVGYPPWNALVAQLPPVKGLW 325
           RGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 301 RGSGVGYPPWNALVAQLPPVKGLW 324

[Close]

BLAST of Sgr015062 vs. NCBI nr
Match: XP_022963501.1 (protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata] >XP_022963502.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 567.0 bits (1460), Expect = 1.2e-157
Identity = 285/324 (87.96%), Postives = 303/324 (93.52%), Query Frame = 0


Query: 1   MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCS 60
           MVVSMA + SCNN GRPPH  RTRSHNA N KF RRICCHVHR  VSF FGP++A++L  
Sbjct: 45  MVVSMAIIPSCNNFGRPPHCSRTRSHNARNLKFCRRICCHVHRNPVSFNFGPSVADSLRY 104

Query: 61  LQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQ 120
           LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIATTQ
Sbjct: 105 LQYRRRNLASVTCSASDKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQ 164

Query: 121 LLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180
           LLAALANS+RAEEVP+IL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL
Sbjct: 165 LLAALANSSRAEEVPDILNGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 224

Query: 181 RVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSL 240
           RVDQNKVI +S+LRGIARLVICAGPESFIMEAFK+SEPFTERLLERGVLVIPFATD SSL
Sbjct: 225 RVDQNKVITISTLRGIARLVICAGPESFIMEAFKTSEPFTERLLERGVLVIPFATDASSL 284

Query: 241 KFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRV 300
            FEFDEREEMK+ITTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSS+SPVYLSLR+DGRV
Sbjct: 285 NFEFDEREEMKDITTKRKRLWRLTPVYMSQWSAWLDDQKKLAGVSSDSPVYLSLRMDGRV 344

Query: 301 RGSGVGYPPWNALVAQLPPVKGLW 325
           RGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 345 RGSGVGYPPWNALVAQLPPVKGLW 368

[Close]

BLAST of Sgr015062 vs. NCBI nr
Match: XP_023554665.1 (protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023554666.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.5 bits (1456), Expect = 3.4e-157
Identity = 284/324 (87.65%), Postives = 302/324 (93.21%), Query Frame = 0


Query: 1   MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCS 60
           MVVSMA + SCNN GRPPH  RTRSHNA N KF RRICCHVHR  VSF FGP++A++L  
Sbjct: 45  MVVSMAIIPSCNNFGRPPHCSRTRSHNARNLKFCRRICCHVHRNRVSFNFGPSVADSLRY 104

Query: 61  LQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQ 120
           LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIATTQ
Sbjct: 105 LQYRRRNLASVTCSASDKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQ 164

Query: 121 LLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180
           LLAALANS+RAEEVP+IL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKL
Sbjct: 165 LLAALANSSRAEEVPDILNGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREESLSNLKL 224

Query: 181 RVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSL 240
           RVDQNKVI +S+LRGIARLVICAGPESFIMEAFK+SEPFTERLLERGVLVIPFATD SSL
Sbjct: 225 RVDQNKVITISTLRGIARLVICAGPESFIMEAFKTSEPFTERLLERGVLVIPFATDASSL 284

Query: 241 KFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRV 300
            FEFDEREEMK+ITTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSS+SPVYLSLR+DGRV
Sbjct: 285 NFEFDEREEMKDITTKRKRLWRLTPVYMSQWSAWLDDQKKLAGVSSDSPVYLSLRMDGRV 344

Query: 301 RGSGVGYPPWNALVAQLPPVKGLW 325
           RGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 345 RGSGVGYPPWNALVAQLPPVKGLW 368

[Close]

BLAST of Sgr015062 vs. NCBI nr
Match: XP_022967293.1 (protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima] >XP_022967294.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 565.1 bits (1455), Expect = 4.4e-157
Identity = 283/324 (87.35%), Postives = 302/324 (93.21%), Query Frame = 0


Query: 1   MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCS 60
           MVVSMA + SCNN GRPPH  RTRSHNAHN KF RRICCHVHR  VSF FGP++A++L  
Sbjct: 1   MVVSMAIIPSCNNFGRPPHCSRTRSHNAHNLKFCRRICCHVHRNPVSFNFGPSVADSLRY 60

Query: 61  LQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQ 120
           LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIATTQ
Sbjct: 61  LQYRRRNLASVTCSASDKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQ 120

Query: 121 LLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180
           LLAALAN++RAEEVP+IL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKL
Sbjct: 121 LLAALANTSRAEEVPDILNGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREESLSNLKL 180

Query: 181 RVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSL 240
           RVDQNKVI +S+LRGIARLVICAGPES IMEAFK+SEPFTERLLERGVLVIPFATD SSL
Sbjct: 181 RVDQNKVITISTLRGIARLVICAGPESLIMEAFKTSEPFTERLLERGVLVIPFATDASSL 240

Query: 241 KFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRV 300
            FEFDEREEMK+ITTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSS+SPVYLSLR+DGRV
Sbjct: 241 NFEFDEREEMKDITTKRKRLWRLTPVYMSQWSAWLDDQKKLAGVSSDSPVYLSLRMDGRV 300

Query: 301 RGSGVGYPPWNALVAQLPPVKGLW 325
           RGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 301 RGSGVGYPPWNALVAQLPPVKGLW 324

[Close]

BLAST of Sgr015062 vs. NCBI nr
Match: KAG6571565.1 (Protein LOW PSII ACCUMULATION 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 563.5 bits (1451), Expect = 1.3e-156
Identity = 287/338 (84.91%), Postives = 310/338 (91.72%), Query Frame = 0


Query: 1   MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCS 60
           MVVSMA + SCNN GRPPH  RTRSHNA N KF RRICCHVHR  VSF FGP++A++L  
Sbjct: 1   MVVSMAIIPSCNNFGRPPHCSRTRSHNARNLKFCRRICCHVHRNRVSFNFGPSVADSLRY 60

Query: 61  LQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQ 120
           LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIATTQ
Sbjct: 61  LQYRRRNLASVTCSASDKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQ 120

Query: 121 LLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180
           LLAALANS+RAEEVP+IL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL
Sbjct: 121 LLAALANSSRAEEVPDILNGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180

Query: 181 RVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSL 240
           RVDQNKVI +S+LRGIARLV+CAGPESFIMEAFK+SEPFTERLLERGVLVIPFATD SSL
Sbjct: 181 RVDQNKVITISTLRGIARLVVCAGPESFIMEAFKTSEPFTERLLERGVLVIPFATDASSL 240

Query: 241 KFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRV 300
            FEFDEREEMK+ITTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSS+SPVYLSLR+DGRV
Sbjct: 241 NFEFDEREEMKDITTKRKRLWRLTPVYMSQWSAWLDDQKKLAGVSSDSPVYLSLRMDGRV 300

Query: 301 RGSGVGYPPWNALVAQLPPVKGLWFSGMELLKAFTMEW 339
           RGSGVGYPPWNALVAQLPPVKGL    ++L +A T E+
Sbjct: 301 RGSGVGYPPWNALVAQLPPVKGLC---LQLQRALTGEF 335

[Close]

BLAST of Sgr015062 vs. ExPASy Swiss-Prot
Match: Q9SRY4 (Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LPA1 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-30
Identity = 85/261 (32.57%), Postives = 132/261 (50.57%), Query Frame = 0


Query: 86  KIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQLLAALANSARAEEVPNILKGLG--- 145
           K+ SEV +PFR VR FFY AF A+  +       +L+ A+      +  PN+L+  G   
Sbjct: 187 KLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRG---GDGAPNLLETTGNAA 246

Query: 146 IDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPLSSLRGIARLVIC 205
           I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N+V+ L  LR   R VI 
Sbjct: 247 INIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTVRPVIL 306

Query: 206 AGPESFIMEAFKSSEPFTERLLERGVLVIPF---------------------ATDVSSLK 265
           AG +  +  A + ++ F   LL RGVL++P                      AT + S+ 
Sbjct: 307 AGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPEIEKKGFGASSKAATSLPSIG 366

Query: 266 FEFDEREEMKEITTKRKR--LWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGR 321
            +FD R +     +K K    ++   V   EW  W+ +Q+   GV+    VY+ LR+DGR
Sbjct: 367 EDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWERWIRDQQISEGVNPGDDVYIILRLDGR 426

[Close]

BLAST of Sgr015062 vs. ExPASy TrEMBL
Match: A0A6J1BP58 (protein LOW PSII ACCUMULATION 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111004502 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.2e-160
Identity = 289/324 (89.20%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 1   MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCS 60
           MVVSMAN+SS NN G PPH PRTRSHNAHNFKFYR ICC VH KTV F+ GP+LAE+L  
Sbjct: 1   MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRX 60

Query: 61  LQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQ 120
           LQ  RRNLANFTCSAA+KPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIATTQ
Sbjct: 61  LQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQ 120

Query: 121 LLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180
           LLAALANS+RAE+VP+ILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL
Sbjct: 121 LLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180

Query: 181 RVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSL 240
           RVDQ+KVIPL SLRGIARLVICAGPESFIMEAF+SSEPFTE+LLERGV+V+PFATDVSSL
Sbjct: 181 RVDQSKVIPLXSLRGIARLVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSL 240

Query: 241 KFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRV 300
            FEFDERE++K++TTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVS+ESPVYLSLR+DGRV
Sbjct: 241 NFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV 300

Query: 301 RGSGVGYPPWNALVAQLPPVKGLW 325
           RGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 301 RGSGVGYPPWNALVAQLPPVKGLW 324

[Close]

BLAST of Sgr015062 vs. ExPASy TrEMBL
Match: A0A6J1HGA1 (protein LOW PSII ACCUMULATION 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463810 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 5.6e-158
Identity = 285/324 (87.96%), Postives = 303/324 (93.52%), Query Frame = 0


Query: 1   MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCS 60
           MVVSMA + SCNN GRPPH  RTRSHNA N KF RRICCHVHR  VSF FGP++A++L  
Sbjct: 45  MVVSMAIIPSCNNFGRPPHCSRTRSHNARNLKFCRRICCHVHRNPVSFNFGPSVADSLRY 104

Query: 61  LQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQ 120
           LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIATTQ
Sbjct: 105 LQYRRRNLASVTCSASDKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQ 164

Query: 121 LLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180
           LLAALANS+RAEEVP+IL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL
Sbjct: 165 LLAALANSSRAEEVPDILNGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 224

Query: 181 RVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSL 240
           RVDQNKVI +S+LRGIARLVICAGPESFIMEAFK+SEPFTERLLERGVLVIPFATD SSL
Sbjct: 225 RVDQNKVITISTLRGIARLVICAGPESFIMEAFKTSEPFTERLLERGVLVIPFATDASSL 284

Query: 241 KFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRV 300
            FEFDEREEMK+ITTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSS+SPVYLSLR+DGRV
Sbjct: 285 NFEFDEREEMKDITTKRKRLWRLTPVYMSQWSAWLDDQKKLAGVSSDSPVYLSLRMDGRV 344

Query: 301 RGSGVGYPPWNALVAQLPPVKGLW 325
           RGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 345 RGSGVGYPPWNALVAQLPPVKGLW 368

[Close]

BLAST of Sgr015062 vs. ExPASy TrEMBL
Match: A0A6J1HWD0 (protein LOW PSII ACCUMULATION 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466857 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 2.1e-157
Identity = 283/324 (87.35%), Postives = 302/324 (93.21%), Query Frame = 0


Query: 1   MVVSMANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCS 60
           MVVSMA + SCNN GRPPH  RTRSHNAHN KF RRICCHVHR  VSF FGP++A++L  
Sbjct: 1   MVVSMAIIPSCNNFGRPPHCSRTRSHNAHNLKFCRRICCHVHRNPVSFNFGPSVADSLRY 60

Query: 61  LQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQ 120
           LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIATTQ
Sbjct: 61  LQYRRRNLASVTCSASDKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQ 120

Query: 121 LLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKL 180
           LLAALAN++RAEEVP+IL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKL
Sbjct: 121 LLAALANTSRAEEVPDILNGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREESLSNLKL 180

Query: 181 RVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSL 240
           RVDQNKVI +S+LRGIARLVICAGPES IMEAFK+SEPFTERLLERGVLVIPFATD SSL
Sbjct: 181 RVDQNKVITISTLRGIARLVICAGPESLIMEAFKTSEPFTERLLERGVLVIPFATDASSL 240

Query: 241 KFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRV 300
            FEFDEREEMK+ITTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSS+SPVYLSLR+DGRV
Sbjct: 241 NFEFDEREEMKDITTKRKRLWRLTPVYMSQWSAWLDDQKKLAGVSSDSPVYLSLRMDGRV 300

Query: 301 RGSGVGYPPWNALVAQLPPVKGLW 325
           RGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 301 RGSGVGYPPWNALVAQLPPVKGLW 324

[Close]

BLAST of Sgr015062 vs. ExPASy TrEMBL
Match: A0A0A0L902 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G621430 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.6e-147
Identity = 272/326 (83.44%), Postives = 295/326 (90.49%), Query Frame = 0


Query: 1   MVVSM--ANVSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEAL 60
           M VS+   ++SS NNI  PPHF  T SHNA +FKF RR  C VHRKTVSF+  P L  +L
Sbjct: 1   MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSL 60

Query: 61  CSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIAT 120
             L + RRNLANF CSAADKPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIAT
Sbjct: 61  RFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT 120

Query: 121 TQLLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180
           TQLL ALANS+RA+EVP+IL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNL
Sbjct: 121 TQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180

Query: 181 KLRVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVS 240
           KLRVDQNKVIP+S LRGIARLVICAGPESFI+EAFKSSEPFTERLLERGVLV+P ATDV+
Sbjct: 181 KLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVT 240

Query: 241 SLKFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDG 300
           +L FEFD+REE+K+ITTKRKRLWRLTPVYM EWSAWLDEQKKLAGV+S+SPVYLSLR+DG
Sbjct: 241 TLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG 300

Query: 301 RVRGSGVGYPPWNALVAQLPPVKGLW 325
           RVRGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 301 RVRGSGVGYPPWNALVAQLPPVKGLW 326

[Close]

BLAST of Sgr015062 vs. ExPASy TrEMBL
Match: A0A5D3BG35 (Protein LOW PSII ACCUMULATION 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00670 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.8e-146
Identity = 271/326 (83.13%), Postives = 295/326 (90.49%), Query Frame = 0


Query: 1   MVVSMAN--VSSCNNIGRPPHFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEAL 60
           M VS++   VSS NNI  PPHF  T SHNA +FKF RR C HVHRKTVSF+  P L  +L
Sbjct: 1   MAVSLSTLIVSSFNNIAPPPHFSPTPSHNAPDFKFCRRSCFHVHRKTVSFSSSPRLPVSL 60

Query: 61  CSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIAT 120
               + RRNLAN+  SAADKPEISSTAKIRSEVLSPFRSVRMFFYL FIASGTLGGLIAT
Sbjct: 61  RFHVYGRRNLANYIYSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT 120

Query: 121 TQLLAALANSARAEEVPNILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180
           TQLL ALANS+RA+EVP+ILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL
Sbjct: 121 TQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180

Query: 181 KLRVDQNKVIPLSSLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVS 240
           KLRVDQNKVIP+S+LRGIARLVICAGPESF++EAFKSSEPFTE+LLERGVLV+P ATDV+
Sbjct: 181 KLRVDQNKVIPISTLRGIARLVICAGPESFVIEAFKSSEPFTEQLLERGVLVVPLATDVT 240

Query: 241 SLKFEFDEREEMKEITTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDG 300
           +L FEFDEREE+K+IT+KRK+LWRLTPVYM EWSAWLDEQKKLAGVSS+SPVYLSLR+DG
Sbjct: 241 TLNFEFDEREEVKDITSKRKKLWRLTPVYMTEWSAWLDEQKKLAGVSSDSPVYLSLRMDG 300

Query: 301 RVRGSGVGYPPWNALVAQLPPVKGLW 325
           RVRGSGVGYPPWNALVAQLPPVKGLW
Sbjct: 301 RVRGSGVGYPPWNALVAQLPPVKGLW 326

[Close]

BLAST of Sgr015062 vs. TAIR 10
Match: AT4G28740.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 350.9 bits (899), Expect = 1.2e-96
Identity = 186/310 (60.00%), Postives = 236/310 (76.13%), Query Frame = 0


Query: 19  HFPRTRSHNAHNFKFYRRICCHVHRKTVSFTFGPTLAEALCSLQHTRRNLA-NFTCSAAD 78
           H  +   + A     +RRI  H HR+ + F+          ++   ++ L+ N  C AAD
Sbjct: 31  HISKQALYQAKESYSHRRISRHNHRERLDFSH----RNHRLTITRKQQPLSFNTVCFAAD 90

Query: 79  KP-EISSTAKIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQLLAALANSARAEEVPN 138
           +P EIS+ A+IRSEVLSPFRSVRMFFYLAFIASG+LGGLIAT++L+ ALAN AR+ EV  
Sbjct: 91  EPSEISADARIRSEVLSPFRSVRMFFYLAFIASGSLGGLIATSRLIGALANPARSGEVLE 150

Query: 139 ILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPLSSLRG 198
           I+KGLG+D GA +LFAFLYF EN  KNAQ+ARLSREE+L  LK+RV++ NKVI +  LRG
Sbjct: 151 IVKGLGVDIGAASLFAFLYFNENKTKNAQMARLSREENLGKLKMRVEENNKVISVGDLRG 210

Query: 199 IARLVICAGPESFIMEAFKSSEPFTERLLERGVLVIPFATDVSSLKFEFDERE-EMKEIT 258
           +ARLVICAGP  FI EAFK S+ +T+ L+ERGV+V+ +ATD +S   EFDE +   +E++
Sbjct: 211 VARLVICAGPAEFIEEAFKRSKEYTQGLVERGVVVVAYATDGNSPVLEFDETDIADEEMS 270

Query: 259 TKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGRVRGSGVGYPPWNALV 318
            +RK+LWR+TPV++PEW  WL+EQKKLA VSS+SPVYLSLR+DGRVR SGVGYPPW A V
Sbjct: 271 QRRKKLWRVTPVFVPEWEKWLNEQKKLANVSSDSPVYLSLRLDGRVRASGVGYPPWQAFV 330

Query: 319 AQLPPVKGLW 325
           AQLPPVKG+W
Sbjct: 331 AQLPPVKGMW 336

[Close]

BLAST of Sgr015062 vs. TAIR 10
Match: AT1G02910.1 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-31
Identity = 85/261 (32.57%), Postives = 132/261 (50.57%), Query Frame = 0


Query: 86  KIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTQLLAALANSARAEEVPNILKGLG--- 145
           K+ SEV +PFR VR FFY AF A+  +       +L+ A+      +  PN+L+  G   
Sbjct: 187 KLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRG---GDGAPNLLETTGNAA 246

Query: 146 IDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPLSSLRGIARLVIC 205
           I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N+V+ L  LR   R VI 
Sbjct: 247 INIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTVRPVIL 306

Query: 206 AGPESFIMEAFKSSEPFTERLLERGVLVIPF---------------------ATDVSSLK 265
           AG +  +  A + ++ F   LL RGVL++P                      AT + S+ 
Sbjct: 307 AGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPEIEKKGFGASSKAATSLPSIG 366

Query: 266 FEFDEREEMKEITTKRKR--LWRLTPVYMPEWSAWLDEQKKLAGVSSESPVYLSLRIDGR 321
            +FD R +     +K K    ++   V   EW  W+ +Q+   GV+    VY+ LR+DGR
Sbjct: 367 EDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWERWIRDQQISEGVNPGDDVYIILRLDGR 426

The following BLAST results are available for this feature:

BLAST of Sgr015062 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131239.1	2.5e-160	89.20	protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia] >XP_0221312...	[more]
XP_022963501.1	1.2e-157	87.96	protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata] >XP_02296350...	[more]
XP_023554665.1	3.4e-157	87.65	protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_022967293.1	4.4e-157	87.35	protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima] >XP_022967294....	[more]
KAG6571565.1	1.3e-156	84.91	Protein LOW PSII ACCUMULATION 1, chloroplastic, partial [Cucurbita argyrosperma ...	[more]

BLAST of Sgr015062 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRY4	2.5e-30	32.57	Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Sgr015062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BP58	1.2e-160	89.20	protein LOW PSII ACCUMULATION 1, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1HGA1	5.6e-158	87.96	protein LOW PSII ACCUMULATION 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HWD0	2.1e-157	87.35	protein LOW PSII ACCUMULATION 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0L902	2.6e-147	83.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G621430 PE=4 SV=1	[more]
A0A5D3BG35	3.8e-146	83.13	Protein LOW PSII ACCUMULATION 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Sgr015062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28740.1	1.2e-96	60.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G02910.1	1.8e-31	32.57	tetratricopeptide repeat (TPR)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021883	Protein LOW PSII ACCUMULATION 1-like	PFAM	PF11998	DUF3493	coord: 82..159 e-value: 1.2E-27 score: 95.9
None	No IPR available	PANTHER	PTHR35498	PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC	coord: 33..328
None	No IPR available	PANTHER	PTHR35498:SF1	LOW PSII ACCUMULATION-LIKE PROTEIN	coord: 33..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr015062.1	Sgr015062.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane