Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCACCTCCAGCGGCGTACCTAGTTTTTGCCATTTTGGTCGCATCCATCTCTCCAAGCTCGCCGTCCAGAGCCGCCGCAAACTACGGTAACTCTTTCCTCCTCCTCCGCCGGCGCCACCAGAGAAGCTCCACCGTCCACTCCTATTCGGACACCACAGCTCTCCCCCGCCGTCTCCGCCGGCAAACGAGTCACCTTCTCCACAA GTTTATAACTCACCGCCTCTCTGGAAACCCTTCCGCCGTCTAAATGATGACAGGAACAACAAGTGCTCCGATTTGGAAGCATCCGGAAATGGAGATAAAGATCCAGAGCTGAAACAGGACCCTTGGCCGGAATGCCCCGTCCTTAAATTGCCACCACCTCCATTCTAG mRNA sequence
ATGGCGCCACCTCCAGCGGCGTACCTAGTTTTTGCCATTTTGGTCGCATCCATCTCTCCAAGCTCGCCGTCCAGAGCCGCCGCAAACTACGGTAACTCTTTCCTCCTCCTCCGCCGGCGCCACCAGAGAAGCTCCACCGTCCACTCCTATTCGGACACCACAGCTCTCCCCCGCCGTCTCCGCCGGCAAACGAGTCACCTTCTCCACAAGAACAACAAGTGCTCCGATTTGGAAGCATCCGGAAATGGAGATAAAGATCCAGAGCTGAAACAGGACCCTTGGCCGGAATGCCCCGTCCTTAAATTGCCACCACCTCCATTCTAG Coding sequence (CDS)
ATGGCGCCACCTCCAGCGGCGTACCTAGTTTTTGCCATTTTGGTCGCATCCATCTCTCCAAGCTCGCCGTCCAGAGCCGCCGCAAACTACGGTAACTCTTTCCTCCTCCTCCGCCGGCGCCACCAGAGAAGCTCCACCGTCCACTCCTATTCGGACACCACAGCTCTCCCCCGCCGTCTCCGCCGGCAAACGAGTCACCTTCTCCACAAGAACAACAAGTGCTCCGATTTGGAAGCATCCGGAAATGGAGATAAAGATCCAGAGCTGAAACAGGACCCTTGGCCGGAATGCCCCGTCCTTAAATTGCCACCACCTCCATTCTAG Protein sequence
MAPPPAAYLVFAILVASISPSSPSRAAANYGNSFLLLRRRHQRSSTVHSYSDTTALPRRLRRQTSHLLHKNNKCSDLEASGNGDKDPELKQDPWPECPVLKLPPPPF
Homology
BLAST of Sgr014368 vs. ExPASy TrEMBL
Match:
A0A0A0KEF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1)
HSP 1 Score: 56.6 bits (135), Expect = 7.3e-05
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 0
Query: 4 PPAAYLVFAIL--VASISPSSPS---RAAANYGNSF-------LLLRRRHQRSSTVHSYS 63 PP AYL AIL VAS SPSS S AA +YG + LL H + Sbjct: 3 PPLAYLFLAILLAVASFSPSSLSIAATAAPSYGIPYPPPLPRPLLFHNDHSSLPPSPAAE 62 Query: 64 DTTA-LPRRLRRQTSHLLHKNNKCSDLEASGNGDKDPELKQDPWPECPVLKLPPPPF 108 + A PRR+ + + +KCS EA NG+KD + +DPWP+CPV K PPPPF Sbjct: 63 EYPAKSPRRVNGE------RKDKCS--EAPRNGNKDAKPNKDPWPKCPVPKSPPPPF 111
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0KEF9 7.3e-05 41.88 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
A T G G C G C C A C C T C C A G C G G C G T A C C T A G T T T T T G C C A T T T T G G T C G C A T C C A T C T C T C C A A G C T C G C C G T C C A G A G C C G C C G C A A A C T A C G G T A A C T C T T T C C T C C T C C T C C G C C G G C G C C A C C A G A G A A G C T C C A C C G T C C A C T C C T A T T C G G A C A C C A C A G C T C T C C C C C G C C G T C T C C G C C G G C A A A C G A G T C A C C T T C T C C A C A A G A A C A A C A A G T G C T C C G A T T T G G A A G C A T C C G G A A A T G G A G A T A A A G A T C C A G A G C T G A A A C A G G A C C C T T G G C C G G A A T G C C C C G T C C T T A A A T T G C C A C C A C C T C C A T T C T A G 50 100 150 200 250 300 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 42..107
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 69..92
Relationships
The following mRNA feature(s) are a part of this gene: