Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCGCTGGGTTTCTACGCTTCAACCCCTACGATTCTTCCATTTCGAAAAACCGTTGGCTCTCCCAATGGTAGTTACAATTTTCCCTCCAATTCGAAACCCTCGATTCTCTTCCCTTCCTCCGCCGCCTCTCCGGCGATTTGCAGGCAAAGAAATGAAGGAGAAGACGCGCCTCTCTCCCGTGCTTTAGCTGCTTACAGACTGCTCGGCGTCGACCCGACCTGCTCCCAATCGGAGCTCAAAGCCGCTTTTCGAGCCAAAGTTCTGTTTCCGTCGTCCCTTGCAGCTTTGGTTTCTCTGCCAGTTTGTTTATCTGTTCCATTGCCGAGAAATTTGGATTGTACTATCTAGATTTCTTGTAAAAGATACATTTGATTTTTCGAATTTTAATTGGGGAGCGATGGCTACTTGCGTTAGTTGTTGATTTTTGTTTTTTGTTTTTTGTACCGATTTTCATTCAATTTTGGATTTGTGGGCATGCAGGTGAAGCAATTCCACCCGGACGTGAATAGTAATGGGAACGATTCTGATTCAATGATTCGTCGTGTAATTCAGGCGTACGAGGTAGCTATTCATTGGTAGAATCAAGAAGAAAGTGGTGTTTTTATCTCAATGCTTGATGTCGTTTCTTCAGTACGATAAACATGATGGTAGTCCTCGCTTGTGTTCATCTTAGTATAATAGTTATCTTGGCATGCTTTGTATTGTAGAACTCAAATCTATTCTTTTGTTGTTTCTGTGCTAGTATGTAAGGCGGTTTAGCCTGCTTAAAGACTCATGAGGAGATTGTTGATTGACTAACTCCTTATATCCTCAAACCGCTTCTGGGTTCTTATTGATATGCTTTGAATGACTTGATTTGCACTCAATAATTAGTGAGAAAATGTGTACAGAGAGAAGTTAGTGAAAGAAAGTGTATAGAGAGAGAAATTAGTGAGAGAATATGTGTAGAGATAATTAGGGGAATAAAAAGTGTCTCATTAAAGATTAATGATGATGTATTGAGCCAAAAGTTTCGTTTTTCATCATTCTCTTTCTTATGACTTCTAGATTTCCATCATAAGATCGTAATGCGGCTGGAACTATTTGTTTTTCGTTGACCAACTTGTTCTATCATCTATGTTGTAGTTAATAATGAAACTCAACAACGACTATGGTTTGTAAAATATGCAGATGTTATCCAGCTACAGCCGAACAGAGTTCATTGAGAGGTAATGTAGTGCTTTCAGTATTGATCTCAGGGTTTATCAATCTGGTTAATTTCTTGCAGCATTTTTCGTAGAATAAATCATGTCACGTGCATATTCTTGGAAAGTTCAGGAGGAAGATAATTTATTTATAAACGAAAGATGCTATATAATATATCACACGTGATAAGGGATGAAATGTCTATTGTTGATAATTTGAAACTCAATGTGGTTTATGATTTCCAGTTTCAGTTTCTAGTTCATTTTTATCATTTTATTTGGTGATATATCTATCTATTCATTTTTTTATGAAATTCTCACAATTAAAGATATGAATTCAGGGAATGCTTAGATCCTTTTGAAGACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTTTTTGTGTTGGAAAAGGTACAATCTTTGCTCCAACTTATGGATGCTACCATTTAAGTTCTTTGTTATAATACAAGAATCATGTCCTTCCCATTTAGTCCCCTTTGTCTAAATGTTTTGTCACAATGATATGCAGGCTGCCCGTATTCTTGTGTAGGTAGAGCTCCCCATGTCTTCACTTTTGCTTCTTCCACCGGGACAGCTCGGGCTACTTCTCAAGGTTCGCTTACTTTCTTTATTCTTTAGCAAAAGCATCGGAGAATATGGTCACATTAATTGTAAGGAACAGTACTCACATATTCAACTTCATAAAGAGTGATAGTGAAAAAACATCTACAATATTCTGAGTGCATCACAAAAAGAATCGTGAAATGTGGATCATTCTAATGAAAATTTCTCAATCTATTTACACTTTTCCAATAATTAGGACATAGTGAAGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAACTGTATACATTATGTAACACCTTTGCAAAGGATCATCCTGGAGGAGCTACTTGACAGGTAGAACAATATTCCTACTTAGATATCTTTTTAAACTATGAAAAAGTATAAGTAGAGTCACGTTTGAAAGTAACCACTTTTCTGATTCATTCGAATAAATGTAATTTGAGACAAGAAGAATCTCAAGCCCCAGAAACTCCAAATCAATTTTTTTGGTAGCACAACCATTTTAGATCTTAGTTTATGCCGTCTTTGTGCCTTTTCTTTAGCTTTTTTGTAACTGTGGTTTATCTTTGTTTTGTGCAGTTCCCTGAATGTGCCTTACGATAATTCCGTGGAGGCAGATTTACTATACTCTCTTTTAGTGAAATCAAAATTCGAGAATAATCGATACAAGAAGTCAAAGAGGCAGCCGAAGACGTCAACAGAACAAGTGGATTGGTATTGA
mRNA sequence
ATGGAGGCGCTGGGTTTCTACGCTTCAACCCCTACGATTCTTCCATTTCGAAAAACCGTTGGCTCTCCCAATGGTAGTTACAATTTTCCCTCCAATTCGAAACCCTCGATTCTCTTCCCTTCCTCCGCCGCCTCTCCGGCGATTTGCAGGCAAAGAAATGAAGGAGAAGACGCGCCTCTCTCCCGTGCTTTAGCTGCTTACAGACTGCTCGGCGTCGACCCGACCTGCTCCCAATCGGAGCTCAAAGCCGCTTTTCGAGCCAAAGTTCTGTTTCCGTCGTCCCTTGCAGCTTTGGTTTCTCTGCCAGTGAAGCAATTCCACCCGGACGTGAATAGTAATGGGAACGATTCTGATTCAATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTATCCAGCTACAGCCGAACAGAGTTCATTGAGAGGGAATGCTTAGATCCTTTTGAAGACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTTTTTGTGTTGGAAAAGGCTGCCCGTATTCTTGTGTAGGTAGAGCTCCCCATGTCTTCACTTTTGCTTCTTCCACCGGGACAGCTCGGGCTACTTCTCAAGGACATAGTGAAGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAACTGTATACATTATGTAACACCTTTGCAAAGGATCATCCTGGAGGAGCTACTTGACAGTTCCCTGAATGTGCCTTACGATAATTCCGTGGAGGCAGATTTACTATACTCTCTTTTAGTGAAATCAAAATTCGAGAATAATCGATACAAGAAGTCAAAGAGGCAGCCGAAGACGTCAACAGAACAAGTGGATTGGTATTGA
Coding sequence (CDS)
ATGGAGGCGCTGGGTTTCTACGCTTCAACCCCTACGATTCTTCCATTTCGAAAAACCGTTGGCTCTCCCAATGGTAGTTACAATTTTCCCTCCAATTCGAAACCCTCGATTCTCTTCCCTTCCTCCGCCGCCTCTCCGGCGATTTGCAGGCAAAGAAATGAAGGAGAAGACGCGCCTCTCTCCCGTGCTTTAGCTGCTTACAGACTGCTCGGCGTCGACCCGACCTGCTCCCAATCGGAGCTCAAAGCCGCTTTTCGAGCCAAAGTTCTGTTTCCGTCGTCCCTTGCAGCTTTGGTTTCTCTGCCAGTGAAGCAATTCCACCCGGACGTGAATAGTAATGGGAACGATTCTGATTCAATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTATCCAGCTACAGCCGAACAGAGTTCATTGAGAGGGAATGCTTAGATCCTTTTGAAGACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTTTTTGTGTTGGAAAAGGCTGCCCGTATTCTTGTGTAGGTAGAGCTCCCCATGTCTTCACTTTTGCTTCTTCCACCGGGACAGCTCGGGCTACTTCTCAAGGACATAGTGAAGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAACTGTATACATTATGTAACACCTTTGCAAAGGATCATCCTGGAGGAGCTACTTGACAGTTCCCTGAATGTGCCTTACGATAATTCCGTGGAGGCAGATTTACTATACTCTCTTTTAGTGAAATCAAAATTCGAGAATAATCGATACAAGAAGTCAAAGAGGCAGCCGAAGACGTCAACAGAACAAGTGGATTGGTATTGA
Protein sequence
MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAASPAICRQRNEGEDAPLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVPYDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY
Homology
BLAST of Sgr013715 vs. NCBI nr
Match:
XP_022150755.1 (pentatricopeptide repeat-containing protein At3g05340 [Momordica charantia])
HSP 1 Score: 463.4 bits (1191), Expect = 1.4e-126
Identity = 235/283 (83.04%), Postives = 247/283 (87.28%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAASPA----ICRQRNEGE 60
M AL FYASTPTILPFRKTVGSPN S NFPS SKPSILFPSS++S + ICRQR+EGE
Sbjct: 684 MAALCFYASTPTILPFRKTVGSPNDSSNFPSKSKPSILFPSSSSSASRFATICRQRSEGE 743
Query: 61 DAPLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGND 120
DAPLS ALAAYR+LGVDPTCSQSELKAAFRAK VKQFHPDVN NGN
Sbjct: 744 DAPLSTALAAYRVLGVDPTCSQSELKAAFRAK--------------VKQFHPDVNGNGNA 803
Query: 121 SDSMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVG 180
SDSMIRRVIQAYEMLSSYSRTEFIERECLDPFE+PEC+AFDVFVNEF CVGKGCPYSCV
Sbjct: 804 SDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECQAFDVFVNEFLCVGKGCPYSCVD 863
Query: 181 RAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLN 240
APHVFTFASSTGTARATSQGH EDYQV IA GQCPR+CIHYVTPLQRIILEELLDS+LN
Sbjct: 864 TAPHVFTFASSTGTARATSQGHGEDYQVLIAAGQCPRSCIHYVTPLQRIILEELLDSALN 923
Query: 241 VPYDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
VPYDNSVEADLLYSL+VKSKFENNRYKK K++PK ST QVDWY
Sbjct: 924 VPYDNSVEADLLYSLIVKSKFENNRYKKPKKEPKASTGQVDWY 952
BLAST of Sgr013715 vs. NCBI nr
Match:
KGN60912.1 (hypothetical protein Csa_023479 [Cucumis sativus])
HSP 1 Score: 436.8 bits (1122), Expect = 1.4e-118
Identity = 225/281 (80.07%), Postives = 240/281 (85.41%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAAS--PAICRQRNEGEDA 60
MEAL F + T+LPFRKTVGS N + NFPS SK SILFPSS+ S ICRQR EGED
Sbjct: 1 MEALCF---STTVLPFRKTVGSFNDTSNFPSISKSSILFPSSSTSRFTPICRQRTEGEDT 60
Query: 61 PLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSD 120
LS +AAYRLLG+DPTCS+SELKAAFRAK VKQFHPDVN NGNDSD
Sbjct: 61 LLSGPMAAYRLLGLDPTCSESELKAAFRAK--------------VKQFHPDVNRNGNDSD 120
Query: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRA 180
SMIRRVIQAYEMLSSYSRTEFIERECLDPFE+PECEAFDVFVNEF CVGKGCPYSCV RA
Sbjct: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKGCPYSCVDRA 180
Query: 181 PHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVP 240
PHVFTFASSTGTARA SQGHSEDYQ+Q+AVGQCPR+CIHYVTPLQRIILEELLDS+L+VP
Sbjct: 181 PHVFTFASSTGTARAMSQGHSEDYQLQMAVGQCPRSCIHYVTPLQRIILEELLDSALDVP 240
Query: 241 YDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
YDNS EADLLYSL+VKSKFENNRYKK KR+PK STEQVDWY
Sbjct: 241 YDNSAEADLLYSLIVKSKFENNRYKKPKREPKNSTEQVDWY 264
BLAST of Sgr013715 vs. NCBI nr
Match:
KAA0047985.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 435.6 bits (1119), Expect = 3.1e-118
Identity = 225/281 (80.07%), Postives = 240/281 (85.41%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAAS--PAICRQRNEGEDA 60
MEAL F + T LPFRKTVGS N + NFPS SK SILF SS+ S AICRQR EGED
Sbjct: 1 MEALCF---STTFLPFRKTVGSFNDTSNFPSISKSSILFSSSSTSRFTAICRQRIEGEDT 60
Query: 61 PLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSD 120
PLS +AAYRLLG+DPTCS+SELKAAFRAK VKQFHPDV NGNDSD
Sbjct: 61 PLSGPMAAYRLLGLDPTCSESELKAAFRAK--------------VKQFHPDVTRNGNDSD 120
Query: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRA 180
SMIRRVIQAYEMLSSYSRTEFIERECLDPFE+PECEAFDVFVNEF CVGKGCPYSCV RA
Sbjct: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKGCPYSCVDRA 180
Query: 181 PHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVP 240
PHVFTFASSTGTARATSQGHSEDYQ+Q+AVGQCPR+CIHYVTPLQRIILEELLDS+L+VP
Sbjct: 181 PHVFTFASSTGTARATSQGHSEDYQLQMAVGQCPRSCIHYVTPLQRIILEELLDSALDVP 240
Query: 241 YDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
YDNS EADLLYSL+VKSKFENNRYKK KR+PK STE+VDWY
Sbjct: 241 YDNSAEADLLYSLIVKSKFENNRYKKPKREPKNSTERVDWY 264
BLAST of Sgr013715 vs. NCBI nr
Match:
XP_038877028.1 (pentatricopeptide repeat-containing protein At3g05340 [Benincasa hispida])
HSP 1 Score: 425.6 bits (1093), Expect = 3.2e-115
Identity = 218/276 (78.99%), Postives = 232/276 (84.06%), Query Frame = 0
Query: 6 FYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAASP--AICRQRNEGEDAPLSRA 65
FY P S N + NFPSNSK SILFPSS++S AICRQR EGEDAPLS
Sbjct: 644 FYLDDNRRDPIDNGHNSFNDTSNFPSNSKSSILFPSSSSSRFIAICRQRIEGEDAPLSGV 703
Query: 66 LAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSDSMIRR 125
+AAYRLLGVDPTCS+SELKAAFRAK VKQFHPDVN NGNDSDSMIRR
Sbjct: 704 MAAYRLLGVDPTCSESELKAAFRAK--------------VKQFHPDVNRNGNDSDSMIRR 763
Query: 126 VIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRAPHVFT 185
VIQAYEMLSSYSRTEFIERECLDPFE+PECEAFDVFVNEF CVG+GCPYSCV RAPHVFT
Sbjct: 764 VIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGEGCPYSCVDRAPHVFT 823
Query: 186 FASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVPYDNSV 245
FASSTGTARATSQGH EDYQVQIAVGQCPR+CIHYVTPLQRIILEEL+DS+L+VPYDNS
Sbjct: 824 FASSTGTARATSQGHGEDYQVQIAVGQCPRSCIHYVTPLQRIILEELIDSALDVPYDNSA 883
Query: 246 EADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
EADLLYSL+VKSKFENNRYKK KR+PK S+EQVDWY
Sbjct: 884 EADLLYSLIVKSKFENNRYKKPKREPKASSEQVDWY 905
BLAST of Sgr013715 vs. NCBI nr
Match:
XP_023537184.1 (uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537185.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537187.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 420.6 bits (1080), Expect = 1.0e-113
Identity = 217/281 (77.22%), Postives = 234/281 (83.27%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAAS--PAICRQRNEGEDA 60
MEAL S PT+LPFRKTVGS + SK SILFPSS+ S ICRQR +GED
Sbjct: 1 MEALYLSTSAPTVLPFRKTVGS-------RTISKSSILFPSSSKSRFATICRQRIDGEDT 60
Query: 61 PLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSD 120
PLS A+ AYRL GVDPTCS+SELKAAFRAK VKQFHPDVN +GN SD
Sbjct: 61 PLSNAMDAYRLFGVDPTCSESELKAAFRAK--------------VKQFHPDVNRDGNYSD 120
Query: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRA 180
SMIRRVIQAYEMLSS SRTEFIERECLDPFE+PEC+AFDVFVNEF CVG+GCPYSCV RA
Sbjct: 121 SMIRRVIQAYEMLSSCSRTEFIERECLDPFENPECDAFDVFVNEFLCVGRGCPYSCVDRA 180
Query: 181 PHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVP 240
PHVFTFASSTGTARATSQGH EDYQVQIAVGQCPR+CIHYVTPLQRIILEELLDS+L+VP
Sbjct: 181 PHVFTFASSTGTARATSQGHGEDYQVQIAVGQCPRSCIHYVTPLQRIILEELLDSALDVP 240
Query: 241 YDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
YDNS EADLLYSL+VKSKFENNRY+K KR+PKTSTE+VDWY
Sbjct: 241 YDNSAEADLLYSLIVKSKFENNRYRKPKREPKTSTERVDWY 260
BLAST of Sgr013715 vs. ExPASy TrEMBL
Match:
A0A6J1D9D8 (pentatricopeptide repeat-containing protein At3g05340 OS=Momordica charantia OX=3673 GN=LOC111018815 PE=3 SV=1)
HSP 1 Score: 463.4 bits (1191), Expect = 6.8e-127
Identity = 235/283 (83.04%), Postives = 247/283 (87.28%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAASPA----ICRQRNEGE 60
M AL FYASTPTILPFRKTVGSPN S NFPS SKPSILFPSS++S + ICRQR+EGE
Sbjct: 684 MAALCFYASTPTILPFRKTVGSPNDSSNFPSKSKPSILFPSSSSSASRFATICRQRSEGE 743
Query: 61 DAPLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGND 120
DAPLS ALAAYR+LGVDPTCSQSELKAAFRAK VKQFHPDVN NGN
Sbjct: 744 DAPLSTALAAYRVLGVDPTCSQSELKAAFRAK--------------VKQFHPDVNGNGNA 803
Query: 121 SDSMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVG 180
SDSMIRRVIQAYEMLSSYSRTEFIERECLDPFE+PEC+AFDVFVNEF CVGKGCPYSCV
Sbjct: 804 SDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECQAFDVFVNEFLCVGKGCPYSCVD 863
Query: 181 RAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLN 240
APHVFTFASSTGTARATSQGH EDYQV IA GQCPR+CIHYVTPLQRIILEELLDS+LN
Sbjct: 864 TAPHVFTFASSTGTARATSQGHGEDYQVLIAAGQCPRSCIHYVTPLQRIILEELLDSALN 923
Query: 241 VPYDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
VPYDNSVEADLLYSL+VKSKFENNRYKK K++PK ST QVDWY
Sbjct: 924 VPYDNSVEADLLYSLIVKSKFENNRYKKPKKEPKASTGQVDWY 952
BLAST of Sgr013715 vs. ExPASy TrEMBL
Match:
A0A0A0LJM6 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022810 PE=4 SV=1)
HSP 1 Score: 436.8 bits (1122), Expect = 6.8e-119
Identity = 225/281 (80.07%), Postives = 240/281 (85.41%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAAS--PAICRQRNEGEDA 60
MEAL F + T+LPFRKTVGS N + NFPS SK SILFPSS+ S ICRQR EGED
Sbjct: 1 MEALCF---STTVLPFRKTVGSFNDTSNFPSISKSSILFPSSSTSRFTPICRQRTEGEDT 60
Query: 61 PLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSD 120
LS +AAYRLLG+DPTCS+SELKAAFRAK VKQFHPDVN NGNDSD
Sbjct: 61 LLSGPMAAYRLLGLDPTCSESELKAAFRAK--------------VKQFHPDVNRNGNDSD 120
Query: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRA 180
SMIRRVIQAYEMLSSYSRTEFIERECLDPFE+PECEAFDVFVNEF CVGKGCPYSCV RA
Sbjct: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKGCPYSCVDRA 180
Query: 181 PHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVP 240
PHVFTFASSTGTARA SQGHSEDYQ+Q+AVGQCPR+CIHYVTPLQRIILEELLDS+L+VP
Sbjct: 181 PHVFTFASSTGTARAMSQGHSEDYQLQMAVGQCPRSCIHYVTPLQRIILEELLDSALDVP 240
Query: 241 YDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
YDNS EADLLYSL+VKSKFENNRYKK KR+PK STEQVDWY
Sbjct: 241 YDNSAEADLLYSLIVKSKFENNRYKKPKREPKNSTEQVDWY 264
BLAST of Sgr013715 vs. ExPASy TrEMBL
Match:
A0A5A7U2T5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00480 PE=4 SV=1)
HSP 1 Score: 435.6 bits (1119), Expect = 1.5e-118
Identity = 225/281 (80.07%), Postives = 240/281 (85.41%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAAS--PAICRQRNEGEDA 60
MEAL F + T LPFRKTVGS N + NFPS SK SILF SS+ S AICRQR EGED
Sbjct: 1 MEALCF---STTFLPFRKTVGSFNDTSNFPSISKSSILFSSSSTSRFTAICRQRIEGEDT 60
Query: 61 PLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSD 120
PLS +AAYRLLG+DPTCS+SELKAAFRAK VKQFHPDV NGNDSD
Sbjct: 61 PLSGPMAAYRLLGLDPTCSESELKAAFRAK--------------VKQFHPDVTRNGNDSD 120
Query: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRA 180
SMIRRVIQAYEMLSSYSRTEFIERECLDPFE+PECEAFDVFVNEF CVGKGCPYSCV RA
Sbjct: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKGCPYSCVDRA 180
Query: 181 PHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVP 240
PHVFTFASSTGTARATSQGHSEDYQ+Q+AVGQCPR+CIHYVTPLQRIILEELLDS+L+VP
Sbjct: 181 PHVFTFASSTGTARATSQGHSEDYQLQMAVGQCPRSCIHYVTPLQRIILEELLDSALDVP 240
Query: 241 YDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
YDNS EADLLYSL+VKSKFENNRYKK KR+PK STE+VDWY
Sbjct: 241 YDNSAEADLLYSLIVKSKFENNRYKKPKREPKNSTERVDWY 264
BLAST of Sgr013715 vs. ExPASy TrEMBL
Match:
A0A6J1HMW8 (uncharacterized protein LOC111465640 OS=Cucurbita maxima OX=3661 GN=LOC111465640 PE=4 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 8.6e-114
Identity = 215/281 (76.51%), Postives = 235/281 (83.63%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAAS--PAICRQRNEGEDA 60
MEAL F S P +LPFRKTVGS + SK SILFPSS+ S ICRQR +GED
Sbjct: 1 MEALYFSTSAPPVLPFRKTVGS-------RTISKSSILFPSSSKSRFATICRQRIDGEDT 60
Query: 61 PLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSD 120
PLS A+ AY+L GVDPTCS+SELKAAFRAK VK+FHPDVN +GN SD
Sbjct: 61 PLSNAMDAYKLFGVDPTCSESELKAAFRAK--------------VKEFHPDVNRDGNYSD 120
Query: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRA 180
SMIRRVIQAYEMLSS SRTEFIERECLDPFE+PEC+AFDVFVNEF CVGKGCPYSCVGRA
Sbjct: 121 SMIRRVIQAYEMLSSCSRTEFIERECLDPFENPECDAFDVFVNEFLCVGKGCPYSCVGRA 180
Query: 181 PHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVP 240
PHVFTFASSTGTARATSQGH EDYQVQIAVGQCPR+CIHYVTPLQRIILEELLDS+L+VP
Sbjct: 181 PHVFTFASSTGTARATSQGHGEDYQVQIAVGQCPRSCIHYVTPLQRIILEELLDSALDVP 240
Query: 241 YDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
YDNS E+DLLYSL+VKS+FENNRY+K KR+PKTSTE+VDWY
Sbjct: 241 YDNSAESDLLYSLIVKSRFENNRYRKPKREPKTSTERVDWY 260
BLAST of Sgr013715 vs. ExPASy TrEMBL
Match:
A0A6J1FBN2 (uncharacterized protein LOC111443953 OS=Cucurbita moschata OX=3662 GN=LOC111443953 PE=4 SV=1)
HSP 1 Score: 417.5 bits (1072), Expect = 4.3e-113
Identity = 216/281 (76.87%), Postives = 232/281 (82.56%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAAS--PAICRQRNEGEDA 60
MEAL S PT+LPFRKTVGS + SK SI FPSS+ S ICRQR +GED
Sbjct: 1 MEALYLSTSAPTVLPFRKTVGS-------RTISKSSIPFPSSSKSRFATICRQRIDGEDT 60
Query: 61 PLSRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSD 120
PLS A+ AYRL GVDPTCS+SELKAAFRAK VKQFHPDVN +GN SD
Sbjct: 61 PLSNAMDAYRLFGVDPTCSESELKAAFRAK--------------VKQFHPDVNRDGNYSD 120
Query: 121 SMIRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRA 180
SMIRRVIQAYEMLSS SRTEFIERECLDPFE+PEC+AFDVFVNEF CVGKGCPYSCV RA
Sbjct: 121 SMIRRVIQAYEMLSSCSRTEFIERECLDPFENPECDAFDVFVNEFLCVGKGCPYSCVDRA 180
Query: 181 PHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVP 240
PH FTFASSTGTARATSQGH EDYQVQIAVGQCPR+CIHYVTPLQRIILEELLDS+L+VP
Sbjct: 181 PHAFTFASSTGTARATSQGHGEDYQVQIAVGQCPRSCIHYVTPLQRIILEELLDSALDVP 240
Query: 241 YDNSVEADLLYSLLVKSKFENNRYKKSKRQPKTSTEQVDWY 280
YDNS EADLLYSL+VKSKFENNRY+K KR+PKTSTE+VDWY
Sbjct: 241 YDNSAEADLLYSLIVKSKFENNRYRKPKREPKTSTERVDWY 260
BLAST of Sgr013715 vs. TAIR 10
Match:
AT3G05345.1 (Chaperone DnaJ-domain superfamily protein )
HSP 1 Score: 283.1 bits (723), Expect = 2.4e-76
Identity = 157/280 (56.07%), Postives = 193/280 (68.93%), Query Frame = 0
Query: 1 MEALGFYASTPTILPFRKTVGSPNGSYNFPSNSKPSILFPSSAASPAICRQRNEGEDAPL 60
ME L +AS P I +F SNS+ + +S CR +N + PL
Sbjct: 1 MECLRVFASVPKI--------------SFFSNSR----YSTSQRFIPSCRGKN--REDPL 60
Query: 61 SRALAAYRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSDSM 120
S + + Y +LGV+P+CS SELKAAFRAK VKQ+HPDVN +G++SD M
Sbjct: 61 SSS-SPYSILGVEPSCSSSELKAAFRAK--------------VKQYHPDVNKDGSNSDIM 120
Query: 121 IRRVIQAYEMLSSYSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRAPH 180
IRR+IQAYEML++YSR+E IE ECLDPF+ PECEA DVFVNE CVGK C Y C A H
Sbjct: 121 IRRIIQAYEMLTNYSRSEIIEGECLDPFDHPECEALDVFVNEVLCVGKRCSYPCFETASH 180
Query: 181 VFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEELLDSSLNVPYD 240
VF+ S+GTARA SQGH EDY+VQ AV QCPRNCIHYVTP QRIILEELLDS ++ PYD
Sbjct: 181 VFS-CDSSGTARAMSQGHGEDYRVQSAVNQCPRNCIHYVTPSQRIILEELLDSVVDKPYD 240
Query: 241 NSVEADLLYSLLVKSKFENNRYKK-SKRQPKTSTEQVDWY 280
S EA+ LY+L+VK+KFENNRY+K K+QP++S + VDW+
Sbjct: 241 CSAEAEFLYALIVKAKFENNRYQKPKKKQPESSGKHVDWF 244
BLAST of Sgr013715 vs. TAIR 10
Match:
AT2G42750.1 (DNAJ heat shock N-terminal domain-containing protein )
HSP 1 Score: 68.9 bits (167), Expect = 7.2e-12
Identity = 51/169 (30.18%), Postives = 76/169 (44.97%), Query Frame = 0
Query: 67 YRLLGVDPTCSQSELKAAFRAKVLFPSSLAALVSLPVKQFHPDVNSNGNDSDSMIRRVIQ 126
Y +LG+ P +Q E+K A+ +K HPD++ N ++ + +
Sbjct: 78 YAVLGLLPDATQEEIKKAYYN--------------CMKSCHPDLSGNDPETTNFCMFIND 137
Query: 127 AYEMLSS------YSRTEFIERECLDPFEDPECEAFDVFVNEFFCVGKGCPYSCVGRAPH 186
YE+LS Y ++PF D VFV+EF C+ GC +C AP
Sbjct: 138 IYEILSDPVQRMVYDEIHGYTVTAINPFLDDSTPRDHVFVDEFACI--GCK-NCANVAPD 197
Query: 187 VFTFASSTGTARATSQGHSEDYQVQIAVGQCPRNCIHYVTPLQRIILEE 230
+F G ARA +Q + D VQ AV CP +CIH + Q +LE+
Sbjct: 198 IFQIEEDFGRARACNQRGNPDL-VQQAVETCPVDCIHQTSAAQLSLLED 228
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150755.1 | 1.4e-126 | 83.04 | pentatricopeptide repeat-containing protein At3g05340 [Momordica charantia] | [more] |
KGN60912.1 | 1.4e-118 | 80.07 | hypothetical protein Csa_023479 [Cucumis sativus] | [more] |
KAA0047985.1 | 3.1e-118 | 80.07 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_038877028.1 | 3.2e-115 | 78.99 | pentatricopeptide repeat-containing protein At3g05340 [Benincasa hispida] | [more] |
XP_023537184.1 | 1.0e-113 | 77.22 | uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537185.... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D9D8 | 6.8e-127 | 83.04 | pentatricopeptide repeat-containing protein At3g05340 OS=Momordica charantia OX=... | [more] |
A0A0A0LJM6 | 6.8e-119 | 80.07 | J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022810 PE=4 SV=1 | [more] |
A0A5A7U2T5 | 1.5e-118 | 80.07 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1HMW8 | 8.6e-114 | 76.51 | uncharacterized protein LOC111465640 OS=Cucurbita maxima OX=3661 GN=LOC111465640... | [more] |
A0A6J1FBN2 | 4.3e-113 | 76.87 | uncharacterized protein LOC111443953 OS=Cucurbita moschata OX=3662 GN=LOC1114439... | [more] |
Match Name | E-value | Identity | Description | |
AT3G05345.1 | 2.4e-76 | 56.07 | Chaperone DnaJ-domain superfamily protein | [more] |
AT2G42750.1 | 7.2e-12 | 30.18 | DNAJ heat shock N-terminal domain-containing protein | [more] |