Sgr013546 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr013546
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	F-box protein PP2-B10-like
Location	tig00153902: 135772 .. 136208 (+)
RNA-Seq Expression	Sgr013546
Synteny	Sgr013546

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGCGGCAAGGGAAACGCTGCCGCCGCCGCCGGCGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGCAATCTGGTCAGGCTCGGCGGTGGACTTCTCAGCGTTGCCGGAGGGATGCATCGCTCACATACTCTCCTTCACTACCCCTCAGGACGTGTGCCGGTCGTCCTTGGTTTCGTCGAGTTTCCGAGCGGCGGCCGAGGCCGACGGCGTCTGGGAGAGCTTCCTGCCGCCGGAGTTTCGCGCTGAAATTTCCGACGCCGTTTCGCACATCTTTCCTCCTTTCGCTTCCAAGAAGGAGCTCTACCTCCATCTATGCCGCTACCCGATCCTCATCCACGGCGGTGCCAAGGTAAAATTCACCGCCTCCGCCTCCGCCTCCGCCACCGCCATTTCTAAAAACATATTCATTCGATTCCATCCTAATTT

mRNA sequence

ATGTGGAGCGGCAAGGGAAACGCTGCCGCCGCCGCCGGCGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGCAATCTGGTCAGGCTCGGCGGTGGACTTCTCAGCGTTGCCGGAGGGATGCATCGCTCACATACTCTCCTTCACTACCCCTCAGGACGTGTGCCGGTCGTCCTTGGTTTCGTCGAGTTTCCGAGCGGCGGCCGAGGCCGACGGCGTCTGGGAGAGCTTCCTGCCGCCGGAGTTTCGCGCTGAAATTTCCGACGCCGTTTCGCACATCTTTCCTCCTTTCGCTTCCAAGAAGGAGCTCTACCTCCATCTATGCCGCTACCCGATCCTCATCCACGGCGGTGCCAAGGTAAAATTCACCGCCTCCGCCTCCGCCTCCGCCACCGCCATTTCTAAAAACATATTCATTCGATTCCATCCTAATTT

Coding sequence (CDS)

ATGTGGAGCGGCAAGGGAAACGCTGCCGCCGCCGCCGGCGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGCAATCTGGTCAGGCTCGGCGGTGGACTTCTCAGCGTTGCCGGAGGGATGCATCGCTCACATACTCTCCTTCACTACCCCTCAGGACGTGTGCCGGTCGTCCTTGGTTTCGTCGAGTTTCCGAGCGGCGGCCGAGGCCGACGGCGTCTGGGAGAGCTTCCTGCCGCCGGAGTTTCGCGCTGAAATTTCCGACGCCGTTTCGCACATCTTTCCTCCTTTCGCTTCCAAGAAGGAGCTCTACCTCCATCTATGCCGCTACCCGATCCTCATCCACGGCGGTGCCAAGGTAAAATTCACCGCCTCCGCCTCCGCCTCCGCCACCGCCATTTCTAAAAACATATTCATTCGATTCCATCCTAATTT

Protein sequence

MWSGKGNAAAAAGGGGGGEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAKVKFTASASASATAISKNIFIRFHPNX

Homology

[Close]

BLAST of Sgr013546 vs. NCBI nr
Match: XP_022144423.1 (putative F-box protein PP2-B12 isoform X1 [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-38
Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 16  GGGEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVW 75
           G GEG  GGG  W  +AVDFSALPEGCIAHILSFTTP DVCRS+LVSS+FRAAAEADGVW
Sbjct: 2   GNGEGNYGGG--W--AAVDFSALPEGCIAHILSFTTPHDVCRSALVSSAFRAAAEADGVW 61

Query: 76  ESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAK 121
           + FLPPE+R EISDAVSHIFP FASKKEL+LHLCRYPILIHGGAK
Sbjct: 62  DRFLPPEYRREISDAVSHIFPSFASKKELFLHLCRYPILIHGGAK 102

[Close]

BLAST of Sgr013546 vs. NCBI nr
Match: XP_022144425.1 (putative F-box protein PP2-B12 isoform X2 [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-38
Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 16  GGGEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVW 75
           G GEG  GGG  W  +AVDFSALPEGCIAHILSFTTP DVCRS+LVSS+FRAAAEADGVW
Sbjct: 2   GNGEGNYGGG--W--AAVDFSALPEGCIAHILSFTTPHDVCRSALVSSAFRAAAEADGVW 61

Query: 76  ESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAK 121
           + FLPPE+R EISDAVSHIFP FASKKEL+LHLCRYPILIHGGAK
Sbjct: 62  DRFLPPEYRREISDAVSHIFPSFASKKELFLHLCRYPILIHGGAK 102

[Close]

BLAST of Sgr013546 vs. NCBI nr
Match: XP_023521720.1 (F-box protein PP2-B10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-34
Identity = 86/120 (71.67%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MWSGKGNAAAAAGGGGGGEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSL 60
           M  GKG       G   G+    GG IWSG AVDFSALPEGCIAHILSFT+PQDVCRS+ 
Sbjct: 1   MGKGKGK------GKDKGKAAADGGGIWSGGAVDFSALPEGCIAHILSFTSPQDVCRSAS 60

Query: 61  VSSSFRAAAEADGVWESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAK 120
           VSS+FR+AAEAD VWE FLP E+  EISDAVS IFPPFASKKELY HLCR P+LIHGGAK
Sbjct: 61  VSSTFRSAAEADAVWERFLPLEYGEEISDAVSKIFPPFASKKELYFHLCRVPVLIHGGAK 114

[Close]

BLAST of Sgr013546 vs. NCBI nr
Match: XP_022998814.1 (F-box protein PP2-B10-like [Cucurbita maxima])

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-33
Identity = 86/121 (71.07%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 5   KGNAAAAAGGGGG-----GEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSS 64
           K N+  + G G G     G     GG IWSG AVDFSALPEGCIAHILSFT+PQDVCRS+
Sbjct: 5   KHNSILSMGKGKGKGKDKGTTAADGGGIWSGGAVDFSALPEGCIAHILSFTSPQDVCRSA 64

Query: 65  LVSSSFRAAAEADGVWESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGA 121
            VSS+FR+AAEAD VWE FLP E+  EISDAVS IFPPFASKKELY HLCR P+LIHGGA
Sbjct: 65  SVSSTFRSAAEADAVWERFLPLEYGDEISDAVSKIFPPFASKKELYFHLCRVPVLIHGGA 124

[Close]

BLAST of Sgr013546 vs. NCBI nr
Match: KAG6607139.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-33
Identity = 83/120 (69.17%), Postives = 92/120 (76.67%), Query Frame = 0


Query: 1   MWSGKGNAAAAAGGGGGGEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSL 60
           M  GKG       G   G+    GG IW G AVDFSALPEGCIAHILSFT+PQDVCRS+ 
Sbjct: 1   MGKGKGK------GKDKGKAAADGGGIWYGGAVDFSALPEGCIAHILSFTSPQDVCRSAS 60

Query: 61  VSSSFRAAAEADGVWESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAK 120
           VSS+FR+AAEAD VWE FLP E+  EIS+AVS +FPPFASKKELY HLCR P+LIHGGAK
Sbjct: 61  VSSTFRSAAEADAVWERFLPLEYGEEISEAVSKVFPPFASKKELYFHLCRVPVLIHGGAK 114

[Close]

BLAST of Sgr013546 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 24  GGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEF 83
           GG I S     F  LPE CI++I+SFT+P+D C ++ VS +F +A  +D VW+ FLPPE+
Sbjct: 50  GGEIVSPGTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEY 109

Query: 84  RAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAKVKFTASASASATAI--SKNIFI 141
            + +S +       FASKKELY  LC  P+LI  G K  +   AS     +  SK ++I
Sbjct: 110 ESLVSRS-----RVFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWI 163

[Close]

BLAST of Sgr013546 vs. ExPASy Swiss-Prot
Match: Q570N1 (F-box protein PP2-B3 OS=Arabidopsis thaliana OX=3702 GN=PP2B3 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 9.3e-16
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 35  FSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEFRAEISDAVSHI 94
           F  LPE CI++I+SFTTP+D C ++ VS +F +A ++D VWE FLP ++ + + ++    
Sbjct: 13  FDGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPES---- 72

Query: 95  FPPFASKKELYLHLCRYPILIHGGAK 121
              F SKKEL   LCR P+LI GG K
Sbjct: 73  -RVFLSKKELCFSLCRVPLLIEGGKK 93

[Close]

BLAST of Sgr013546 vs. ExPASy Swiss-Prot
Match: Q9ZVR0 (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana OX=3702 GN=PP2B6 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.3e-16
Identity = 53/125 (42.40%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 21  GGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLP 80
           GGGGG I  G +  F  LPE CI++I+SFT+P+DVC S+ VS SF  A + D +WE FLP
Sbjct: 32  GGGGGEIVPGHS-PFDDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLP 91

Query: 81  PEFRAEISDAVSHIFPP---FASKKELYLHLCRYPILIHGGAKVKF--TASASASATAIS 140
            E+ +        + PP   F+SKK+LY  LC  P+L+  G K  +  TAS        +
Sbjct: 92  SEYES--------LIPPWRVFSSKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAA 147

[Close]

BLAST of Sgr013546 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 6.0e-15
Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 24  GGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEF 83
           GGAI SG ++ F  LPE CI++I+SFT+P+D C ++ VS +F +A  +D VW+ FLP ++
Sbjct: 37  GGAIISGPSL-FDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDY 96

Query: 84  RAEISDAVSHIFPP---FASKKELYLHLCRYPILIHGGAK 121
                   S + PP   F+SKKELY  +C  P+L+  G K
Sbjct: 97  --------SSLVPPSRVFSSKKELYFAICDNPVLVEDGGK 127

[Close]

BLAST of Sgr013546 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 3.0e-14
Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 37  ALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEFRAEISDAVSHIFP 96
           +LPEGCI++I+SFT+P+D C ++ VS  F +A ++D VWE FLP ++ + I+ +      
Sbjct: 26  SLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPS-----R 85

Query: 97  PFASKKELYLHLCRYPILIHGGAKVKFTASASA------SATAIS 136
            F+SKKELY  LC  P+LI  G    +   AS       SATA++
Sbjct: 86  VFSSKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMN 125

[Close]

BLAST of Sgr013546 vs. ExPASy TrEMBL
Match: A0A6J1CT77 (putative F-box protein PP2-B12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014112 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38
Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 16  GGGEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVW 75
           G GEG  GGG  W  +AVDFSALPEGCIAHILSFTTP DVCRS+LVSS+FRAAAEADGVW
Sbjct: 2   GNGEGNYGGG--W--AAVDFSALPEGCIAHILSFTTPHDVCRSALVSSAFRAAAEADGVW 61

Query: 76  ESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAK 121
           + FLPPE+R EISDAVSHIFP FASKKEL+LHLCRYPILIHGGAK
Sbjct: 62  DRFLPPEYRREISDAVSHIFPSFASKKELFLHLCRYPILIHGGAK 102

[Close]

BLAST of Sgr013546 vs. ExPASy TrEMBL
Match: A0A6J1CRK5 (putative F-box protein PP2-B12 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014112 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38
Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 16  GGGEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVW 75
           G GEG  GGG  W  +AVDFSALPEGCIAHILSFTTP DVCRS+LVSS+FRAAAEADGVW
Sbjct: 2   GNGEGNYGGG--W--AAVDFSALPEGCIAHILSFTTPHDVCRSALVSSAFRAAAEADGVW 61

Query: 76  ESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAK 121
           + FLPPE+R EISDAVSHIFP FASKKEL+LHLCRYPILIHGGAK
Sbjct: 62  DRFLPPEYRREISDAVSHIFPSFASKKELFLHLCRYPILIHGGAK 102

[Close]

BLAST of Sgr013546 vs. ExPASy TrEMBL
Match: A0A6J1KFD1 (F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111493364 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.0e-34
Identity = 86/121 (71.07%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 5   KGNAAAAAGGGGG-----GEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSS 64
           K N+  + G G G     G     GG IWSG AVDFSALPEGCIAHILSFT+PQDVCRS+
Sbjct: 5   KHNSILSMGKGKGKGKDKGTTAADGGGIWSGGAVDFSALPEGCIAHILSFTSPQDVCRSA 64

Query: 65  LVSSSFRAAAEADGVWESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGA 121
            VSS+FR+AAEAD VWE FLP E+  EISDAVS IFPPFASKKELY HLCR P+LIHGGA
Sbjct: 65  SVSSTFRSAAEADAVWERFLPLEYGDEISDAVSKIFPPFASKKELYFHLCRVPVLIHGGA 124

[Close]

BLAST of Sgr013546 vs. ExPASy TrEMBL
Match: A0A6J1GD04 (F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111452857 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33
Identity = 83/120 (69.17%), Postives = 92/120 (76.67%), Query Frame = 0


Query: 1   MWSGKGNAAAAAGGGGGGEGGGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSL 60
           M  GKG       G   G+    GG IW G AVDFSALPEGCIAHILSFT+PQDVCRS+ 
Sbjct: 1   MGKGKGK------GKDKGKAAADGGGIWYGGAVDFSALPEGCIAHILSFTSPQDVCRSAS 60

Query: 61  VSSSFRAAAEADGVWESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAK 120
           VSS+FR+AAEAD VWE FLP E+  EIS+AVS +FPPFASKKELY HLCR P+LIHGGAK
Sbjct: 61  VSSTFRSAAEADAVWERFLPLEYGEEISEAVSKVFPPFASKKELYFHLCRVPVLIHGGAK 114

[Close]

BLAST of Sgr013546 vs. ExPASy TrEMBL
Match: A0A6J1IEL1 (F-box protein At2g02240-like OS=Cucurbita maxima OX=3661 GN=LOC111472548 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.0e-33
Identity = 71/92 (77.17%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 29  SGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEFRAEIS 88
           + +AV FSALPEGCIAHILSFT+PQDVCR + VSS+FR+AA+AD +WE FLP E+ AEIS
Sbjct: 7   TAAAVGFSALPEGCIAHILSFTSPQDVCRFASVSSTFRSAADADDIWERFLPLEYGAEIS 66

Query: 89  DAVSHIFPPFASKKELYLHLCRYPILIHGGAK 121
           DA+SHIFPPFASKKELYLHLCR+P+LIH GAK
Sbjct: 67  DALSHIFPPFASKKELYLHLCRFPVLIHCGAK 98

[Close]

BLAST of Sgr013546 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 24  GGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEF 83
           GG I S     F  LPE CI++I+SFT+P+D C ++ VS +F +A  +D VW+ FLPPE+
Sbjct: 50  GGEIVSPGTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEY 109

Query: 84  RAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAKVKFTASASASATAI--SKNIFI 141
            + +S +       FASKKELY  LC  P+LI  G K  +   AS     +  SK ++I
Sbjct: 110 ESLVSRS-----RVFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWI 163

[Close]

BLAST of Sgr013546 vs. TAIR 10
Match: AT2G02310.1 (phloem protein 2-B6 )

HSP 1 Score: 84.7 bits (208), Expect = 6.6e-17
Identity = 53/125 (42.40%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 21  GGGGGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLP 80
           GGGGG I  G +  F  LPE CI++I+SFT+P+DVC S+ VS SF  A + D +WE FLP
Sbjct: 32  GGGGGEIVPGHS-PFDDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLP 91

Query: 81  PEFRAEISDAVSHIFPP---FASKKELYLHLCRYPILIHGGAKVKF--TASASASATAIS 140
            E+ +        + PP   F+SKK+LY  LC  P+L+  G K  +  TAS        +
Sbjct: 92  SEYES--------LIPPWRVFSSKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAA 147

[Close]

BLAST of Sgr013546 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 82.0 bits (201), Expect = 4.3e-16
Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 24  GGAIWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEF 83
           GGAI SG ++ F  LPE CI++I+SFT+P+D C ++ VS +F +A  +D VW+ FLP ++
Sbjct: 37  GGAIISGPSL-FDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDY 96

Query: 84  RAEISDAVSHIFPP---FASKKELYLHLCRYPILIHGGAK 121
                   S + PP   F+SKKELY  +C  P+L+  G K
Sbjct: 97  --------SSLVPPSRVFSSKKELYFAICDNPVLVEDGGK 127

[Close]

BLAST of Sgr013546 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 77.8 bits (190), Expect = 8.1e-15
Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 29  SGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAAAEADGVWESFLPPEFRAEIS 88
           S    +   LPE C++ I+SFT+PQD C  + VS +F +A ++D VWE F+PPE+ + IS
Sbjct: 30  SHGVAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLIS 89

Query: 89  DAVSHIFPPFASKKELYLHLCRYPILIHGGAKVKFTASASA 130
              S  F  F SKKELY  LC   +LI  G K  +   A+A
Sbjct: 90  Q--SRAF-KFLSKKELYFALCDKSVLIDDGKKSLWIEKANA 127

[Close]

BLAST of Sgr013546 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-13
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 14  GGGGGEGGGGGGA-----IWSGSAVDFSALPEGCIAHILSFTTPQDVCRSSLVSSSFRAA 73
           GG    GGGGGG+     I    A  F ALPE CI+ ++S T+P+D C  + VS S ++A
Sbjct: 6   GGDSNSGGGGGGSSRNDEISVTRASRFDALPEDCISKVISHTSPRDACVVASVSKSVKSA 65

Query: 74  AEADGVWESFLPPEFRAEISDAVSHIFPPFASKKELYLHLCRYPILIHGGAKVKFTASAS 129
           A++D VWE FLP E+ + +  + +H+     SKKE++L L    +L+  G K  +   AS
Sbjct: 66  AQSDLVWEMFLPSEYSSLVLQSANHL-----SKKEIFLSLADNSVLVENGKKSFWVEKAS 120

The following BLAST results are available for this feature:

BLAST of Sgr013546 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144423.1	3.7e-38	83.81	putative F-box protein PP2-B12 isoform X1 [Momordica charantia]	[more]
XP_022144425.1	3.7e-38	83.81	putative F-box protein PP2-B12 isoform X2 [Momordica charantia]	[more]
XP_023521720.1	1.5e-34	71.67	F-box protein PP2-B10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998814.1	1.2e-33	71.07	F-box protein PP2-B10-like [Cucurbita maxima]	[more]
KAG6607139.1	2.8e-33	69.17	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sgr013546 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E6P4	1.4e-16	42.02	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q570N1	9.3e-16	46.51	F-box protein PP2-B3 OS=Arabidopsis thaliana OX=3702 GN=PP2B3 PE=2 SV=2	[more]
Q9ZVR0	9.3e-16	42.40	Putative F-box protein PP2-B6 OS=Arabidopsis thaliana OX=3702 GN=PP2B6 PE=4 SV=1	[more]
Q9ZVR5	6.0e-15	44.00	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]
Q9FV02	3.0e-14	41.90	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]

BLAST of Sgr013546 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT77	1.8e-38	83.81	putative F-box protein PP2-B12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1CRK5	1.8e-38	83.81	putative F-box protein PP2-B12 isoform X2 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1KFD1	6.0e-34	71.07	F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111493364 PE=4 SV=1	[more]
A0A6J1GD04	1.3e-33	69.17	F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111452857 PE=4 SV...	[more]
A0A6J1IEL1	3.0e-33	77.17	F-box protein At2g02240-like OS=Cucurbita maxima OX=3661 GN=LOC111472548 PE=4 SV...	[more]

BLAST of Sgr013546 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02240.1	1.0e-17	42.02	F-box family protein	[more]
AT2G02310.1	6.6e-17	42.40	phloem protein 2-B6	[more]
AT2G02250.1	4.3e-16	44.00	phloem protein 2-B2	[more]
AT2G02340.1	8.1e-15	43.56	phloem protein 2-B8	[more]
AT2G02230.1	4.4e-13	39.17	phloem protein 2-B1	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 38..78 e-value: 7.0E-4 score: 28.9
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 35..78 e-value: 4.6E-6 score: 26.3
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 32..78 score: 9.68293
None	No IPR available	GENE3D	1.20.1280.50		coord: 29..78 e-value: 4.4E-8 score: 34.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 31..120
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 31..120
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 33..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr013546.1	Sgr013546.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding