Sgr012587 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr012587
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Descriptionlipid transfer protein EARLI 1-like
Locationtig00153449: 38571 .. 39023 (+)
RNA-Seq ExpressionSgr012587
SyntenySgr012587
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTCCCAACAAAACCACCACCTCACTTGCTCTCTTCTTCTGTCTCAACCTTCTCTTCTTGTCCCTTGTTACTACTGCTCGTGGCTCATGTCCTCCACCGGTGCCAAGTCCAGCGCCGAGCCCAAATTTCAGTGGTAGCCCCGGCCCAGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGTAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCGGTGGCAGTCCCAGTCCTACGGGAGGAGCTAATTGTCCTAGGGATGCCGCCAAAATAG

mRNA sequence

ATGGCTTCTCCCAACAAAACCACCACCTCACTTGCTCTCTTCTTCTGTCTCAACCTTCTCTTCTTGTCCCTTGTTACTACTGCTCGTGGCTCATGTCCTCCACCGGTGCCAAGTCCAGCGCCGAGCCCAAATTTCAGTGGTAGCCCCGGCCCAGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGTAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCGGTGGCAGTCCCAGTCCTACGGGAGGAGCTAATTGTCCTAGGGATGCCGCCAAAATAG

Coding sequence (CDS)

ATGGCTTCTCCCAACAAAACCACCACCTCACTTGCTCTCTTCTTCTGTCTCAACCTTCTCTTCTTGTCCCTTGTTACTACTGCTCGTGGCTCATGTCCTCCACCGGTGCCAAGTCCAGCGCCGAGCCCAAATTTCAGTGGTAGCCCCGGCCCAGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGCAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCTGGGGTAGTCCCGGTCCAAGTGGTAGCGGTGGCAGTCCCGGTCCTAGTGGTAGCGGTGGCAGTCCCAGTCCTACGGGAGGAGCTAATTGTCCTAGGGATGCCGCCAAAATAG

Protein sequence

MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPGPVAVPVLVVAGAVPVQVVAVAVPVLVVAGAVPVQVVAVAVPVLVVAGAVPVQVVAVAVPVLVVAGVVPVQVVAVAVPVLVVAVAVPVLREELIVLGMPPK
Homology
BLAST of Sgr012587 vs. NCBI nr
Match: XP_031737657.1 (pEARLI1-like lipid transfer protein 3 [Cucumis sativus] >KAE8650066.1 hypothetical protein Csa_011283 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-06
Identity = 37/50 (74.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          MASP KTTTS+ALFFCLNLLF SLV TA GSC  PV  P PSP+F G PG
Sbjct: 25 MASP-KTTTSIALFFCLNLLFFSLV-TACGSCSHPVTRPKPSPSFGGHPG 72

BLAST of Sgr012587 vs. NCBI nr
Match: XP_022153977.1 (lipid transfer protein EARLI 1-like [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-05
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          MASP KTTTS+ALFFCLNLLF SLV TA G+C  PV  P PSP  SG PG
Sbjct: 1  MASP-KTTTSIALFFCLNLLFFSLV-TACGTCSHPVTRPKPSPGSSGRPG 48

BLAST of Sgr012587 vs. NCBI nr
Match: XP_038903682.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida])

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-05
Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          M+SP KTTTS+ALFFCLNLLF SLV TA GSC  P+  P PSP   G PG
Sbjct: 1  MSSP-KTTTSIALFFCLNLLFFSLV-TACGSCSHPITRPRPSPGSGGQPG 48

BLAST of Sgr012587 vs. NCBI nr
Match: XP_008448870.1 (PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo])

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          MASP KTTTS+ALFFCLN+LF SLV TA GSC  P+  P P+P   G PG
Sbjct: 1  MASP-KTTTSIALFFCLNILFFSLV-TACGSCSHPITRPKPNPGSGGHPG 48

BLAST of Sgr012587 vs. NCBI nr
Match: TYK12009.1 (lipid transfer protein EARLI 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-04
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          MASP KTTTS+ALFFCLN+LF SLV TA GSC  P+  P P+P   G PG
Sbjct: 1  MASP-KTTTSIALFFCLNILFFSLV-TACGSCSHPITRPKPNPGSRGHPG 48

BLAST of Sgr012587 vs. ExPASy TrEMBL
Match: A0A0A0L1L2 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G026160 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06
Identity = 37/50 (74.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          MASP KTTTS+ALFFCLNLLF SLV TA GSC  PV  P PSP+F G PG
Sbjct: 25 MASP-KTTTSIALFFCLNLLFFSLV-TACGSCSHPVTRPKPSPSFGGHPG 72

BLAST of Sgr012587 vs. ExPASy TrEMBL
Match: A0A6J1DKF1 (lipid transfer protein EARLI 1-like OS=Momordica charantia OX=3673 GN=LOC111021354 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.3e-06
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          MASP KTTTS+ALFFCLNLLF SLV TA G+C  PV  P PSP  SG PG
Sbjct: 1  MASP-KTTTSIALFFCLNLLFFSLV-TACGTCSHPVTRPKPSPGSSGRPG 48

BLAST of Sgr012587 vs. ExPASy TrEMBL
Match: A0A1S3BLL6 (lipid transfer protein EARLI 1-like OS=Cucumis melo OX=3656 GN=LOC103490903 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.0e-05
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          MASP KTTTS+ALFFCLN+LF SLV TA GSC  P+  P P+P   G PG
Sbjct: 1  MASP-KTTTSIALFFCLNILFFSLV-TACGSCSHPITRPKPNPGSGGHPG 48

BLAST of Sgr012587 vs. ExPASy TrEMBL
Match: A0A5D3CP01 (Lipid transfer protein EARLI 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00170 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 7.9e-05
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query: 1  MASPNKTTTSLALFFCLNLLFLSLVTTARGSCPPPVPSPAPSPNFSGSPG 51
          MASP KTTTS+ALFFCLN+LF SLV TA GSC  P+  P P+P   G PG
Sbjct: 1  MASP-KTTTSIALFFCLNILFFSLV-TACGSCSHPITRPKPNPGSRGHPG 48

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031737657.12.3e-0674.00pEARLI1-like lipid transfer protein 3 [Cucumis sativus] >KAE8650066.1 hypothetic... [more]
XP_022153977.11.9e-0572.00lipid transfer protein EARLI 1-like [Momordica charantia][more]
XP_038903682.15.6e-0568.0014 kDa proline-rich protein DC2.15-like [Benincasa hispida][more]
XP_008448870.11.2e-0466.00PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo][more]
TYK12009.11.6e-0466.00lipid transfer protein EARLI 1-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L1L21.1e-0674.00AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G026160 PE=3 SV... [more]
A0A6J1DKF19.3e-0672.00lipid transfer protein EARLI 1-like OS=Momordica charantia OX=3673 GN=LOC1110213... [more]
A0A1S3BLL66.0e-0566.00lipid transfer protein EARLI 1-like OS=Cucumis melo OX=3656 GN=LOC103490903 PE=3... [more]
A0A5D3CP017.9e-0566.00Lipid transfer protein EARLI 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr012587.1Sgr012587.1mRNA