Homology
BLAST of Sgr012509 vs. NCBI nr
Match:
XP_022156625.1 (pentatricopeptide repeat-containing protein At3g62890-like [Momordica charantia])
HSP 1 Score: 1262.7 bits (3266), Expect = 0.0e+00
Identity = 623/788 (79.06%), Postives = 681/788 (86.42%), Query Frame = 0
Query: 1 MDQLILSPQSLSSSSLLPLPIQSLRPPPSPSKLKHSHPCDFLEVHGHLNLQQTQQIHAHF 60
MD+LILSPQSLSS SLL LNL+QT Q+HA F
Sbjct: 1 MDRLILSPQSLSSPSLL---------------------------RRQLNLEQTHQLHARF 60
Query: 61 IKTQFDETHLSPEAKYNLLISSYTNNQLPEAALDLYLQIRRTENGNTPVDNFIVPSVLKA 120
IKTQF +LSPEAK+N LISSYT+NQ P A LYL +RRT++ +T +DNFIVPS+LKA
Sbjct: 61 IKTQFHGGNLSPEAKFNFLISSYTSNQFPHLAFHLYLHLRRTDS-DTRLDNFIVPSLLKA 120
Query: 121 CGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSW 180
C QASC LGKE+HGFA++ GFG VFVCNALMNMY +CGSL+SARLVFDK P RD VSW
Sbjct: 121 CAQASCRTLGKELHGFAIKSGFGECVFVCNALMNMYERCGSLISARLVFDKIPHRDAVSW 180
Query: 181 STMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIR 240
STML CYVRS L+GEA L+REM G+KLSDVAMISMIDVF ELSDMKSGKAMHGYIIR
Sbjct: 181 STMLRCYVRSKLYGEAFRLVREMHIVGVKLSDVAMISMIDVFGELSDMKSGKAMHGYIIR 240
Query: 241 NVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGA 300
NVSD++MEV + TALI MY KCECLA AQ LFDGL ++SVVSWTAMIA CI +EEGA
Sbjct: 241 NVSDKEMEVPMRTALIDMYGKCECLASAQRLFDGLSRKSVVSWTAMIASCIHCHEIEEGA 300
Query: 301 KNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMY 360
KNF RM EE VFPNEIT L LI+ECGFVGALDLGKWLHAHLLRNGF MSL LATALI+MY
Sbjct: 301 KNFKRMREEEVFPNEITFLGLISECGFVGALDLGKWLHAHLLRNGFEMSLALATALINMY 360
Query: 361 GKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSDVKPNKVTMV 420
GKC +VR+ARALFDGV EKDVK+WSALISAYAQVSC+DQAF LFFEML + VKPNKVTMV
Sbjct: 361 GKCRQVRHARALFDGVDEKDVKVWSALISAYAQVSCIDQAFDLFFEMLSNKVKPNKVTMV 420
Query: 421 SLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTALIDMYAKCGDLKIARCLFDEDTRR 480
SLLSLCAEAGALD GKWTHAYI R LE+DI+LKTALIDMYAKCGDLKIAR LFDED +R
Sbjct: 421 SLLSLCAEAGALDYGKWTHAYIHRHGLEVDIILKTALIDMYAKCGDLKIARSLFDEDAQR 480
Query: 481 DMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPNDITFISVFHACSHSGLVAEGKKHF 540
D+SMWNAM+AGFSMHG G+EALELFSEMESHGVEPNDITFIS+FHACSHSG+VAEGKKHF
Sbjct: 481 DISMWNAMIAGFSMHGRGKEALELFSEMESHGVEPNDITFISLFHACSHSGMVAEGKKHF 540
Query: 541 NKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMRPNTVVWGALLAACKLHKN 600
++MVH +G+ PK+EHYGCLVDLLGRAG+L EAH +IQNMPM+PNTV+WGALLAACKLHKN
Sbjct: 541 SRMVHCYGVVPKLEHYGCLVDLLGRAGYLTEAHTIIQNMPMKPNTVIWGALLAACKLHKN 600
Query: 601 LALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTDVTSIRETMNYLGMKKEPGLSWIE 660
LALGEVAAR +LELDPQNCGYSVL+SNIYASAKRWTDVTSIRE MN LGMKKEPGLSWIE
Sbjct: 601 LALGEVAARNLLELDPQNCGYSVLRSNIYASAKRWTDVTSIREKMNNLGMKKEPGLSWIE 660
Query: 661 VNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTSVVLLNVEEEEKESALNYH 720
VNGSVHHFKSGDK C + RKVYEMV EMC+KLKE GY P+TSVVLLNVEEEEKESALNYH
Sbjct: 661 VNGSVHHFKSGDKKCTKTRKVYEMVGEMCMKLKEAGYEPDTSVVLLNVEEEEKESALNYH 720
Query: 721 SEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKLLSKIYGRTIIVRDQNRFHHFSEG 780
SEKLAMAFGLISTAPGTPIRIVKNLR+C+DCHTATKLLSKIYGRTIIVRD+NRFHHFSEG
Sbjct: 721 SEKLAMAFGLISTAPGTPIRIVKNLRICNDCHTATKLLSKIYGRTIIVRDRNRFHHFSEG 760
Query: 781 YCSCLGYW 789
YCSCLGYW
Sbjct: 781 YCSCLGYW 760
BLAST of Sgr012509 vs. NCBI nr
Match:
XP_038879151.1 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 603/751 (80.29%), Postives = 666/751 (88.68%), Query Frame = 0
Query: 45 HGHLNLQQTQQIHAHFIKTQ-------FDETHLSPEAKYNLLISSYTNNQLPEAALDLYL 104
H HL+LQQTQQIHAHFIKTQ F +TH SPEA YNLLISSYTNN LP+A+ LYL
Sbjct: 18 HSHLSLQQTQQIHAHFIKTQFHRPHPFFSQTHFSPEANYNLLISSYTNNHLPQASFKLYL 77
Query: 105 QIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYV 164
+R T+ +DNFI+PS+LKAC QASCG LG+E+HGFA++ GF +VFVCNALMNMY
Sbjct: 78 HMRTTD-AAAALDNFILPSLLKACAQASCGVLGRELHGFAIKNGFAPDVFVCNALMNMYE 137
Query: 165 KCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMIS 224
KCGSLV ARLVFDK P+RDVVSWSTMLGCYVRS + EA++L+REM F G+KLS VA+IS
Sbjct: 138 KCGSLVFARLVFDKMPDRDVVSWSTMLGCYVRSKSYDEALVLVREMHFVGVKLSGVALIS 197
Query: 225 MIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQ 284
MI F EL DMKSG+A+HGYI+RNV DEKMEV +TTALI MYCK E L AQ LFD LPQ
Sbjct: 198 MIGAFGELLDMKSGRAVHGYIVRNVVDEKMEVPLTTALINMYCKGERLESAQRLFDVLPQ 257
Query: 285 RSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWL 344
+SVVSWT MIAGCIR+ L EGA NFNRMLEE VFPNEITLL+LITECGFVG LDLGKW
Sbjct: 258 KSVVSWTVMIAGCIRNCRLVEGANNFNRMLEEEVFPNEITLLNLITECGFVGTLDLGKWF 317
Query: 345 HAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCV 404
HA+LLRN FGMSL L TALIDMYGKCG+V YARALF+G++EKDVKIWSAL+ AYA SC+
Sbjct: 318 HAYLLRNEFGMSLALVTALIDMYGKCGQVGYARALFNGIEEKDVKIWSALLLAYAHASCI 377
Query: 405 DQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTAL 464
DQAF LF EMLDS+VKPNKVTMV LLSLCAEAGAL+LGKWTH YI+R LE+D+VL+TAL
Sbjct: 378 DQAFNLFLEMLDSEVKPNKVTMVGLLSLCAEAGALNLGKWTHTYINRHGLEVDVVLETAL 437
Query: 465 IDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPND 524
I+MYAKCGDL IAR LFDE T+RD+ MWNAMMAGFSMHGCG+EALELFSEME +GVEPND
Sbjct: 438 INMYAKCGDLTIARSLFDEATQRDIHMWNAMMAGFSMHGCGKEALELFSEMEGYGVEPND 497
Query: 525 ITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQ 584
ITFISVFHACSHSGLV +GKKHFN+MVHDFGI PKIEHYGCLVDLLGRAGHLDEAH++I+
Sbjct: 498 ITFISVFHACSHSGLVVDGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGHLDEAHNIIE 557
Query: 585 NMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 644
NMPM+PNT++WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD
Sbjct: 558 NMPMKPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 617
Query: 645 VTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGY 704
VTS+RETM++LGMKKEPGLSWIEVNGSVHHFKSGDKTC Q +VYEMV EMCIKL+E GY
Sbjct: 618 VTSVRETMSHLGMKKEPGLSWIEVNGSVHHFKSGDKTCTQTTEVYEMVTEMCIKLRETGY 677
Query: 705 APNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKL 764
PNTS VLLNVEEEEKES L+YHSEKLAMAFGLISTAPGTPIRIVKNLR+CDDCH ATKL
Sbjct: 678 TPNTSAVLLNVEEEEKESTLSYHSEKLAMAFGLISTAPGTPIRIVKNLRICDDCHAATKL 737
Query: 765 LSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
LSKIYGRTIIVRD+NRFHHFSEG+CSCLGYW
Sbjct: 738 LSKIYGRTIIVRDRNRFHHFSEGFCSCLGYW 767
BLAST of Sgr012509 vs. NCBI nr
Match:
KAA0062552.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK28774.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 598/751 (79.63%), Postives = 667/751 (88.81%), Query Frame = 0
Query: 45 HGHLNLQQTQQIHAHFIKTQ-------FDETHLSPEAKYNLLISSYTNNQLPEAALDLYL 104
+ HLNLQQT Q+HAHFIKTQ F ++H +PEA YNLLISSYTNN LP+A+L+ YL
Sbjct: 17 YSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASLNCYL 76
Query: 105 QIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYV 164
+ RT + +DNFI+PS+LKAC QAS LG+E+HGFA + GF +VFVCNALMNMY
Sbjct: 77 HM-RTNDAAAALDNFILPSLLKACAQASSADLGRELHGFAQKNGFASDVFVCNALMNMYE 136
Query: 165 KCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMIS 224
KCG LVSA LVFDK PERDVVSWSTMLGCYVRS FGEA+ L+REM+F G+KLS VA+IS
Sbjct: 137 KCGCLVSASLVFDKMPERDVVSWSTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALIS 196
Query: 225 MIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQ 284
+I VF L DMKSG+A+HGYI+RNV DEKMEV++TTALI MYCKCECLA AQ LFD L +
Sbjct: 197 LIGVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSLTTALIDMYCKCECLASAQRLFDRLSK 256
Query: 285 RSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWL 344
RSVVSWT MI GCIRS L EGAKNFNRMLEE++FPNEITLLSLITECGFV LDLGKW
Sbjct: 257 RSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLITECGFVKTLDLGKWF 316
Query: 345 HAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCV 404
HA+LLRNGFGMSL L TALIDMYGKCG+V YARALF+GV++KDVKIWSALISAYA VSC+
Sbjct: 317 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVKIWSALISAYAHVSCM 376
Query: 405 DQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTAL 464
DQ F LF EMLD++VKPNKVTMVSLLSLCAEAG LDLGKWTHAYI+R LE+D++L+TAL
Sbjct: 377 DQVFNLFLEMLDNEVKPNKVTMVSLLSLCAEAGTLDLGKWTHAYINRHGLEVDVILETAL 436
Query: 465 IDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPND 524
I+MY KCGD+ IAR LFDE T+RD+ MWNAMMAGFSMHGCG+EALELFSEMESHGVEPND
Sbjct: 437 INMYVKCGDVTIARSLFDEATQRDIHMWNAMMAGFSMHGCGKEALELFSEMESHGVEPND 496
Query: 525 ITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQ 584
ITFIS+FHACSHSGLV EGKKHFN+MVH FGI PK+EHYGCLVDLLGRAGHL+EAH++I+
Sbjct: 497 ITFISIFHACSHSGLVVEGKKHFNRMVHSFGIVPKMEHYGCLVDLLGRAGHLEEAHNIIE 556
Query: 585 NMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 644
NMPMRPNT++WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW D
Sbjct: 557 NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 616
Query: 645 VTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGY 704
VTS+RETM++LGMKKEPGLSWIEVNGSVHHFKSGDKTC Q KVYEMVAEMCIKL+E GY
Sbjct: 617 VTSVRETMSHLGMKKEPGLSWIEVNGSVHHFKSGDKTCTQTTKVYEMVAEMCIKLREAGY 676
Query: 705 APNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKL 764
PNT+ VLLN++EEEKESAL+YHSEKLAMAFGLISTAPGTPIRI+KNLR+CDDCH A KL
Sbjct: 677 TPNTAEVLLNIDEEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAAMKL 736
Query: 765 LSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
LSKIY RTIIVRD+NRFHHFSEGYCSCLGYW
Sbjct: 737 LSKIYARTIIVRDRNRFHHFSEGYCSCLGYW 766
BLAST of Sgr012509 vs. NCBI nr
Match:
XP_008462708.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucumis melo])
HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 598/751 (79.63%), Postives = 668/751 (88.95%), Query Frame = 0
Query: 45 HGHLNLQQTQQIHAHFIKTQ-------FDETHLSPEAKYNLLISSYTNNQLPEAALDLYL 104
+ HLNLQQT Q+HAHFIKTQ F ++H +PEA YNLLISSYTNN LP+A+L+ YL
Sbjct: 17 YSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASLNCYL 76
Query: 105 QIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYV 164
+ RT + +DNFI+PS+LKAC QAS LG+E+HGFA + GF +VFVCNALMNMY
Sbjct: 77 HM-RTNDAAAALDNFILPSLLKACAQASSADLGRELHGFAQKNGFASDVFVCNALMNMYE 136
Query: 165 KCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMIS 224
KCG LVSA LVFDK PERDVVSWSTMLGCYVRS FGEA+ L+REM+F G+KLS VA+IS
Sbjct: 137 KCGCLVSASLVFDKMPERDVVSWSTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALIS 196
Query: 225 MIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQ 284
+I VF L DMKSG+A+HGYI+RNV DEKMEV++TTALI MYCKCECLA AQ LFD L +
Sbjct: 197 LIGVFGNLLDMKSGRAVHGYIMRNVGDEKMEVSLTTALIDMYCKCECLASAQRLFDRLSK 256
Query: 285 RSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWL 344
RSVVSWT MI GCIRS L EGAKNFNRMLEE++FPNEITLLSLITECGFV LDLGKW
Sbjct: 257 RSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLITECGFVKTLDLGKWF 316
Query: 345 HAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCV 404
HA+LLRNGFGMSL L TALIDMYGKCG+V YARALF+GV++KDVKIWSALISAYA VSC+
Sbjct: 317 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVKIWSALISAYAHVSCM 376
Query: 405 DQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTAL 464
DQ F LF EMLD++VKPNKVTMVSLLSLCAEAG LDLGKWTHAYI+R LE+D++L+TAL
Sbjct: 377 DQVFNLFLEMLDNEVKPNKVTMVSLLSLCAEAGTLDLGKWTHAYINRHGLEVDVILETAL 436
Query: 465 IDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPND 524
I+MY KCGD+ IAR LFDE T+RD+ MWNAMMAGFSMHGCG+EALELFSEMESHGVEPND
Sbjct: 437 INMYVKCGDVTIARSLFDEATQRDIHMWNAMMAGFSMHGCGKEALELFSEMESHGVEPND 496
Query: 525 ITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQ 584
ITFIS+FHACSHSGLV EGKKHFN+MVH+FGI PK+EHYGCLVDLLGRAGHL+EAH++I+
Sbjct: 497 ITFISIFHACSHSGLVVEGKKHFNRMVHNFGIVPKMEHYGCLVDLLGRAGHLEEAHNIIE 556
Query: 585 NMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 644
NMPMRPNT++WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW D
Sbjct: 557 NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 616
Query: 645 VTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGY 704
VTS+RETM++LGMKKEPGLSWIEVNGSVHHFKSGDKTC Q KVYEMVAEMCIKL+E GY
Sbjct: 617 VTSVRETMSHLGMKKEPGLSWIEVNGSVHHFKSGDKTCTQTTKVYEMVAEMCIKLREAGY 676
Query: 705 APNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKL 764
PNT+ VLLN++EEEKESAL+YHSEKLAMAFGLISTAPGTPIRI+KNLR+CDDCH A KL
Sbjct: 677 TPNTAEVLLNIDEEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAAMKL 736
Query: 765 LSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
LSKIY RTIIVRD+NRFHHFSEGYCSCLGYW
Sbjct: 737 LSKIYARTIIVRDRNRFHHFSEGYCSCLGYW 766
BLAST of Sgr012509 vs. NCBI nr
Match:
XP_011660280.1 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial [Cucumis sativus])
HSP 1 Score: 1242.3 bits (3213), Expect = 0.0e+00
Identity = 593/751 (78.96%), Postives = 664/751 (88.42%), Query Frame = 0
Query: 45 HGHLNLQQTQQIHAHFIKTQ-------FDETHLSPEAKYNLLISSYTNNQLPEAALDLYL 104
H HLNLQQT Q+HAHFIKTQ F ++H +PEA YNLLISSYTNN LP+A+ + YL
Sbjct: 17 HSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYL 76
Query: 105 QIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYV 164
+R N +DNFI+PS+LKAC QAS G LG+E+HGFA + GF +VFVCNALMNMY
Sbjct: 77 HMR--SNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYE 136
Query: 165 KCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMIS 224
KCG LVSARLVFD+ PERDVVSW+TMLGCYVRS FGEA+ L+REM+F G+KLS VA+IS
Sbjct: 137 KCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALIS 196
Query: 225 MIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQ 284
+I VF L DMKSG+A+HGYI+RNV DEKMEV++TTALI MYCK CLA AQ LFD L +
Sbjct: 197 LIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSK 256
Query: 285 RSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWL 344
RSVVSWT MIAGCIRS L+EGAKNFNRMLEE++FPNEITLLSLITECGFVG LDLGKW
Sbjct: 257 RSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWF 316
Query: 345 HAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCV 404
HA+LLRNGFGMSL L TALIDMYGKCG+V YARALF+GVK+KDVKIWS LISAYA VSC+
Sbjct: 317 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCM 376
Query: 405 DQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTAL 464
DQ F LF EML++DVKPN VTMVSLLSLCAEAGALDLGKWTHAYI+R LE+D++L+TAL
Sbjct: 377 DQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETAL 436
Query: 465 IDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPND 524
I+MYAKCGD+ IAR LF+E +RD+ MWN MMAGFSMHGCG+EALELFSEMESHGVEPND
Sbjct: 437 INMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPND 496
Query: 525 ITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQ 584
ITF+S+FHACSHSGLV EGKK+FNKMVHDFGI PK+EHYGCLVDLLGRAGHLDEAH++I+
Sbjct: 497 ITFVSIFHACSHSGLVVEGKKYFNKMVHDFGIVPKMEHYGCLVDLLGRAGHLDEAHNIIE 556
Query: 585 NMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 644
NMPMRPNT++WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW D
Sbjct: 557 NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 616
Query: 645 VTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGY 704
VTS+RE M++ GMKKEPGLSWIEV+GSVHHFKSGDK C Q KVYEMV EMCIKL+E GY
Sbjct: 617 VTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGY 676
Query: 705 APNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKL 764
PNT+ VLLN++EEEKESAL+YHSEKLA AFGLISTAPGTPIRIVKNLR+CDDCH ATKL
Sbjct: 677 TPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKL 736
Query: 765 LSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
LSKIYGRTIIVRD+NRFHHFSEGYCSC+GYW
Sbjct: 737 LSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 765
BLAST of Sgr012509 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 560.1 bits (1442), Expect = 4.1e-158
Identity = 288/719 (40.06%), Postives = 431/719 (59.94%), Query Frame = 0
Query: 73 EAKYNLLISSYTNNQLPEAALDLYLQI---RRTENGNTPVDNFIVPSVLKACGQASCGFL 132
++K N+L + + LD LQ R ++ V NF +LK CG + +
Sbjct: 96 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDEAELRV 155
Query: 133 GKEIHGFAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSWSTMLGCYVR 192
GKEIHG V+ GF ++F L NMY KC + AR VFD+ PERD+VSW+T++ Y +
Sbjct: 156 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 215
Query: 193 SNLFGEAVILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIRNVSDEKMEV 252
+ + A+ +++ M +K S + ++S++ + L + GK +HGY +R+ D V
Sbjct: 216 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL--V 275
Query: 253 AITTALIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEE 312
I+TAL+ MY KC L A+ LFDG+ +R+VVSW +MI +++ +E F +ML+E
Sbjct: 276 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 335
Query: 313 RVFPNEITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMYGKCGRVRYA 372
V P +++++ + C +G L+ G+++H + G ++ + +LI MY KC V A
Sbjct: 336 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 395
Query: 373 RALFDGVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEA 432
++F ++ + + W+A+I +AQ A F +M VKP+ T VS+++ AE
Sbjct: 396 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 455
Query: 433 GALDLGKWTHAYISRQDLELDIVLKTALIDMYAKCGDLKIARCLFDEDTRRDMSMWNAMM 492
KW H + R L+ ++ + TAL+DMYAKCG + IAR +FD + R ++ WNAM+
Sbjct: 456 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 515
Query: 493 AGFSMHGCGREALELFSEMESHGVEPNDITFISVFHACSHSGLVAEGKKHFNKMVHDFGI 552
G+ HG G+ ALELF EM+ ++PN +TF+SV ACSHSGLV G K F M ++ I
Sbjct: 516 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 575
Query: 553 APKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMRPNTVVWGALLAACKLHKNLALGEVAAR 612
++HYG +VDLLGRAG L+EA D I MP++P V+GA+L AC++HKN+ E AA
Sbjct: 576 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAE 635
Query: 613 KILELDPQNCGYSVLKSNIYASAKRWTDVTSIRETMNYLGMKKEPGLSWIEVNGSVHHFK 672
++ EL+P + GY VL +NIY +A W V +R +M G++K PG S +E+ VH F
Sbjct: 636 RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFF 695
Query: 673 SGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTSVVLLNVEEEEKESALNYHSEKLAMAFG 732
SG +K+Y + ++ +KE GY P+T++V L VE + KE L+ HSEKLA++FG
Sbjct: 696 SGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFG 755
Query: 733 LISTAPGTPIRIVKNLRVCDDCHTATKLLSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
L++T GT I + KNLRVC DCH ATK +S + GR I+VRD RFHHF G CSC YW
Sbjct: 756 LLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Sgr012509 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 550.8 bits (1418), Expect = 2.5e-155
Identity = 315/817 (38.56%), Postives = 451/817 (55.20%), Query Frame = 0
Query: 4 LILSPQSLSSSSLLPLPIQSLRPPPSPSKLKHSHPCDFLEVHGHLNLQQTQQIHAHFIKT 63
L SP ++ SSS + S PP S +HP L +H LQ + IHA IK
Sbjct: 3 LSCSPLTVPSSSYPFHFLPSSSDPPYDS--IRNHPSLSL-LHNCKTLQSLRIIHAQMIKI 62
Query: 64 QFDETH-----------LSPEAK-------------------YNLLISSYTNNQLPEAAL 123
T+ LSP + +N + + + P +AL
Sbjct: 63 GLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSAL 122
Query: 124 DLYLQIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALM 183
LY + G P +++ P VLK+C ++ G++IHG +++G +++V +L+
Sbjct: 123 KLY--VCMISLGLLP-NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 182
Query: 184 NMYVKCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDV 243
+MYV+ G L A VFDK P RDVVS++ ++
Sbjct: 183 SMYVQNGRLEDAHKVFDKSPHRDVVSYTALI----------------------------- 242
Query: 244 AMISMIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFD 303
G A GYI AQ LFD
Sbjct: 243 ----------------KGYASRGYI---------------------------ENAQKLFD 302
Query: 304 GLPQRSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDL 363
+P + VVSW AMI+G +G +E + F M++ V P+E T++++++ C G+++L
Sbjct: 303 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 362
Query: 364 GKWLHAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQ 423
G+ +H + +GFG +L + ALID+Y KCG + A LF+ + KDV W+ LI Y
Sbjct: 363 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 422
Query: 424 VSCVDQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISR--QDLELDI 483
++ +A LF EML S PN VTM+S+L CA GA+D+G+W H YI + + +
Sbjct: 423 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 482
Query: 484 VLKTALIDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESH 543
L+T+LIDMYAKCGD++ A +F+ + +S WNAM+ GF+MHG + +LFS M
Sbjct: 483 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 542
Query: 544 GVEPNDITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDE 603
G++P+DITF+ + ACSHSG++ G+ F M D+ + PK+EHYGC++DLLG +G E
Sbjct: 543 GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKE 602
Query: 604 AHDVIQNMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYAS 663
A ++I M M P+ V+W +LL ACK+H N+ LGE A +++++P+N G VL SNIYAS
Sbjct: 603 AEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYAS 662
Query: 664 AKRWTDVTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIK 723
A RW +V R +N GMKK PG S IE++ VH F GDK + R++Y M+ EM +
Sbjct: 663 AGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 722
Query: 724 LKEVGYAPNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDC 783
L++ G+ P+TS VL +EEE KE AL +HSEKLA+AFGLIST PGT + IVKNLRVC +C
Sbjct: 723 LEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 741
Query: 784 HTATKLLSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
H ATKL+SKIY R II RD+ RFHHF +G CSC YW
Sbjct: 783 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Sgr012509 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 543.5 bits (1399), Expect = 3.9e-153
Identity = 289/746 (38.74%), Postives = 434/746 (58.18%), Query Frame = 0
Query: 76 YNLLISSYTNNQLPEAALDLYLQIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHG 135
YN LI Y ++ L A+ L+L R N D + P L AC ++ G +IHG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFL---RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 161
Query: 136 FAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGE 195
V++G+ ++FV N+L++ Y +CG L SAR VFD+ ER+VVSW++M+ Y R + +
Sbjct: 162 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 221
Query: 196 AV-ILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTA 255
AV + R +R + + V M+ +I A+L D+++G+ ++ + IRN E ++ + +A
Sbjct: 222 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMV-SA 281
Query: 256 LIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPN 315
L+ MY KC + A+ LFD ++ AM + +R G E FN M++ V P+
Sbjct: 282 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 341
Query: 316 EITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFD 375
I++LS I+ C + + GK H ++LRNGF + ALIDMY KC R A +FD
Sbjct: 342 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 401
Query: 376 GVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSD----------------------- 435
+ K V W+++++ Y + VD A+ F M + +
Sbjct: 402 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 461
Query: 436 ---------VKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTALIDMYA 495
V + VTM+S+ S C GALDL KW + YI + ++LD+ L T L+DM++
Sbjct: 462 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 521
Query: 496 KCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPNDITFIS 555
+CGD + A +F+ T RD+S W A + +M G A+ELF +M G++P+ + F+
Sbjct: 522 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 581
Query: 556 VFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMR 615
ACSH GLV +GK+ F M+ G++P+ HYGC+VDLLGRAG L+EA +I++MPM
Sbjct: 582 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 641
Query: 616 PNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTDVTSIR 675
PN V+W +LLAAC++ N+ + AA KI L P+ G VL SN+YASA RW D+ +R
Sbjct: 642 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 701
Query: 676 ETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTS 735
+M G++K PG S I++ G H F SGD++ + + M+ E+ + +G+ P+ S
Sbjct: 702 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 761
Query: 736 VVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKLLSKIY 789
VL++V+E+EK L+ HSEKLAMA+GLIS+ GT IRIVKNLRVC DCH+ K SK+Y
Sbjct: 762 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 821
BLAST of Sgr012509 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 539.7 bits (1389), Expect = 5.7e-152
Identity = 270/725 (37.24%), Postives = 427/725 (58.90%), Query Frame = 0
Query: 65 FDETHLSPEAKYNLLISSYTNNQLPEAALDLYLQIRRTENGNTPVDNFIVPSVLKACGQA 124
FDE + +N+L++ + ++ L+ ++ + +D++ V K+
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLF---KKMMSSGVEMDSYTFSCVSKSFSSL 211
Query: 125 SCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSWSTML 184
G+++HGF ++ GFG V N+L+ Y+K + SAR VFD+ ERDV+SW++++
Sbjct: 212 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 271
Query: 185 GCYVRSNLFGEAVILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIRNVSD 244
YV + L + + + +M +G+++ ++S+ A+ + G+A+H ++
Sbjct: 272 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 331
Query: 245 EKMEVAITTALIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGAKNFN 304
E L+ MY KC L A+++F + RSVVS+T+MIAG R G E K F
Sbjct: 332 R--EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 391
Query: 305 RMLEERVFPNEITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMYGKCG 364
M EE + P+ T+ +++ C LD GK +H + N G + ++ AL+DMY KCG
Sbjct: 392 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 451
Query: 365 RVRYARALFDGVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSD-VKPNKVTMVSLL 424
++ A +F ++ KD+ W+ +I Y++ ++A LF +L+ P++ T+ +L
Sbjct: 452 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 511
Query: 425 SLCAEAGALDLGKWTHAYISRQDLELDIVLKTALIDMYAKCGDLKIARCLFDEDTRRDMS 484
CA A D G+ H YI R D + +L+DMYAKCG L +A LFD+ +D+
Sbjct: 512 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 571
Query: 485 MWNAMMAGFSMHGCGREALELFSEMESHGVEPNDITFISVFHACSHSGLVAEGKKHFNKM 544
W M+AG+ MHG G+EA+ LF++M G+E ++I+F+S+ +ACSHSGLV EG + FN M
Sbjct: 572 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 631
Query: 545 VHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMRPNTVVWGALLAACKLHKNLAL 604
H+ I P +EHY C+VD+L R G L +A+ I+NMP+ P+ +WGALL C++H ++ L
Sbjct: 632 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 691
Query: 605 GEVAARKILELDPQNCGYSVLKSNIYASAKRWTDVTSIRETMNYLGMKKEPGLSWIEVNG 664
E A K+ EL+P+N GY VL +NIYA A++W V +R+ + G++K PG SWIE+ G
Sbjct: 692 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 751
Query: 665 SVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTSVVLLNVEEEEKESALNYHSEK 724
V+ F +GD + + + + ++ ++ E GY+P T L++ EE EKE AL HSEK
Sbjct: 752 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 811
Query: 725 LAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKLLSKIYGRTIIVRDQNRFHHFSEGYCS 784
LAMA G+IS+ G IR+ KNLRVC DCH K +SK+ R I++RD NRFH F +G+CS
Sbjct: 812 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 871
Query: 785 CLGYW 789
C G+W
Sbjct: 872 CRGFW 871
BLAST of Sgr012509 vs. ExPASy Swiss-Prot
Match:
Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)
HSP 1 Score: 535.4 bits (1378), Expect = 1.1e-150
Identity = 275/720 (38.19%), Postives = 420/720 (58.33%), Query Frame = 0
Query: 76 YNLLISSYTNNQLPEAALDLYLQIRRTEN--GNTPVDNFIVPSVLKACGQASCGF----L 135
+N+L+ ++ N+ P ++L ++ +R++ + N+ F + A+ GF
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAI--------SAASGFRDDRA 145
Query: 136 GKEIHGFAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSWSTMLGCYVR 195
G+ IHG AV G E+ + + ++ MY K + AR VFD+ PE+D + W+TM+ Y +
Sbjct: 146 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 205
Query: 196 SNLFGEAVILMREM-RFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIRNVSDEKME 255
+ ++ E++ + R++ + +L ++ ++ AEL +++ G +H + +
Sbjct: 206 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS--LATKTGCYSH 265
Query: 256 VAITTALIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGAKNFNRMLE 315
+ T I +Y KC + +LF + +V++ AMI G +G E F ++
Sbjct: 266 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 325
Query: 316 ERVFPNEITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMYGKCGRVRY 375
TL+SL+ G L L +H + L++ F ++TAL +Y K +
Sbjct: 326 SGARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 385
Query: 376 ARALFDGVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSDVKPNKVTMVSLLSLCAE 435
AR LFD EK + W+A+IS Y Q + A LF EM S+ PN VT+ +LS CA+
Sbjct: 386 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 445
Query: 436 AGALDLGKWTHAYISRQDLELDIVLKTALIDMYAKCGDLKIARCLFDEDTRRDMSMWNAM 495
GAL LGKW H + D E I + TALI MYAKCG + AR LFD T+++ WN M
Sbjct: 446 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM 505
Query: 496 MAGFSMHGCGREALELFSEMESHGVEPNDITFISVFHACSHSGLVAEGKKHFNKMVHDFG 555
++G+ +HG G+EAL +F EM + G+ P +TF+ V +ACSH+GLV EG + FN M+H +G
Sbjct: 506 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 565
Query: 556 IAPKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMRPNTVVWGALLAACKLHKNLALGEVAA 615
P ++HY C+VD+LGRAGHL A I+ M + P + VW LL AC++HK+ L +
Sbjct: 566 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS 625
Query: 616 RKILELDPQNCGYSVLKSNIYASAKRWTDVTSIRETMNYLGMKKEPGLSWIEVNGSVHHF 675
K+ ELDP N GY VL SNI+++ + + ++R+T + K PG + IE+ + H F
Sbjct: 626 EKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVF 685
Query: 676 KSGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTSVVLLNVEEEEKESALNYHSEKLAMAF 735
SGD++ Q +++YE + ++ K++E GY P T + L +VEEEE+E + HSE+LA+AF
Sbjct: 686 TSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAF 745
Query: 736 GLISTAPGTPIRIVKNLRVCDDCHTATKLLSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
GLI+T PGT IRI+KNLRVC DCHT TKL+SKI R I+VRD NRFHHF +G CSC YW
Sbjct: 746 GLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of Sgr012509 vs. ExPASy TrEMBL
Match:
A0A6J1DQU9 (pentatricopeptide repeat-containing protein At3g62890-like OS=Momordica charantia OX=3673 GN=LOC111023484 PE=3 SV=1)
HSP 1 Score: 1262.7 bits (3266), Expect = 0.0e+00
Identity = 623/788 (79.06%), Postives = 681/788 (86.42%), Query Frame = 0
Query: 1 MDQLILSPQSLSSSSLLPLPIQSLRPPPSPSKLKHSHPCDFLEVHGHLNLQQTQQIHAHF 60
MD+LILSPQSLSS SLL LNL+QT Q+HA F
Sbjct: 1 MDRLILSPQSLSSPSLL---------------------------RRQLNLEQTHQLHARF 60
Query: 61 IKTQFDETHLSPEAKYNLLISSYTNNQLPEAALDLYLQIRRTENGNTPVDNFIVPSVLKA 120
IKTQF +LSPEAK+N LISSYT+NQ P A LYL +RRT++ +T +DNFIVPS+LKA
Sbjct: 61 IKTQFHGGNLSPEAKFNFLISSYTSNQFPHLAFHLYLHLRRTDS-DTRLDNFIVPSLLKA 120
Query: 121 CGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSW 180
C QASC LGKE+HGFA++ GFG VFVCNALMNMY +CGSL+SARLVFDK P RD VSW
Sbjct: 121 CAQASCRTLGKELHGFAIKSGFGECVFVCNALMNMYERCGSLISARLVFDKIPHRDAVSW 180
Query: 181 STMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIR 240
STML CYVRS L+GEA L+REM G+KLSDVAMISMIDVF ELSDMKSGKAMHGYIIR
Sbjct: 181 STMLRCYVRSKLYGEAFRLVREMHIVGVKLSDVAMISMIDVFGELSDMKSGKAMHGYIIR 240
Query: 241 NVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGA 300
NVSD++MEV + TALI MY KCECLA AQ LFDGL ++SVVSWTAMIA CI +EEGA
Sbjct: 241 NVSDKEMEVPMRTALIDMYGKCECLASAQRLFDGLSRKSVVSWTAMIASCIHCHEIEEGA 300
Query: 301 KNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMY 360
KNF RM EE VFPNEIT L LI+ECGFVGALDLGKWLHAHLLRNGF MSL LATALI+MY
Sbjct: 301 KNFKRMREEEVFPNEITFLGLISECGFVGALDLGKWLHAHLLRNGFEMSLALATALINMY 360
Query: 361 GKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSDVKPNKVTMV 420
GKC +VR+ARALFDGV EKDVK+WSALISAYAQVSC+DQAF LFFEML + VKPNKVTMV
Sbjct: 361 GKCRQVRHARALFDGVDEKDVKVWSALISAYAQVSCIDQAFDLFFEMLSNKVKPNKVTMV 420
Query: 421 SLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTALIDMYAKCGDLKIARCLFDEDTRR 480
SLLSLCAEAGALD GKWTHAYI R LE+DI+LKTALIDMYAKCGDLKIAR LFDED +R
Sbjct: 421 SLLSLCAEAGALDYGKWTHAYIHRHGLEVDIILKTALIDMYAKCGDLKIARSLFDEDAQR 480
Query: 481 DMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPNDITFISVFHACSHSGLVAEGKKHF 540
D+SMWNAM+AGFSMHG G+EALELFSEMESHGVEPNDITFIS+FHACSHSG+VAEGKKHF
Sbjct: 481 DISMWNAMIAGFSMHGRGKEALELFSEMESHGVEPNDITFISLFHACSHSGMVAEGKKHF 540
Query: 541 NKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMRPNTVVWGALLAACKLHKN 600
++MVH +G+ PK+EHYGCLVDLLGRAG+L EAH +IQNMPM+PNTV+WGALLAACKLHKN
Sbjct: 541 SRMVHCYGVVPKLEHYGCLVDLLGRAGYLTEAHTIIQNMPMKPNTVIWGALLAACKLHKN 600
Query: 601 LALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTDVTSIRETMNYLGMKKEPGLSWIE 660
LALGEVAAR +LELDPQNCGYSVL+SNIYASAKRWTDVTSIRE MN LGMKKEPGLSWIE
Sbjct: 601 LALGEVAARNLLELDPQNCGYSVLRSNIYASAKRWTDVTSIREKMNNLGMKKEPGLSWIE 660
Query: 661 VNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTSVVLLNVEEEEKESALNYH 720
VNGSVHHFKSGDK C + RKVYEMV EMC+KLKE GY P+TSVVLLNVEEEEKESALNYH
Sbjct: 661 VNGSVHHFKSGDKKCTKTRKVYEMVGEMCMKLKEAGYEPDTSVVLLNVEEEEKESALNYH 720
Query: 721 SEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKLLSKIYGRTIIVRDQNRFHHFSEG 780
SEKLAMAFGLISTAPGTPIRIVKNLR+C+DCHTATKLLSKIYGRTIIVRD+NRFHHFSEG
Sbjct: 721 SEKLAMAFGLISTAPGTPIRIVKNLRICNDCHTATKLLSKIYGRTIIVRDRNRFHHFSEG 760
Query: 781 YCSCLGYW 789
YCSCLGYW
Sbjct: 781 YCSCLGYW 760
BLAST of Sgr012509 vs. ExPASy TrEMBL
Match:
A0A5A7V2V9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001350 PE=3 SV=1)
HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 598/751 (79.63%), Postives = 667/751 (88.81%), Query Frame = 0
Query: 45 HGHLNLQQTQQIHAHFIKTQ-------FDETHLSPEAKYNLLISSYTNNQLPEAALDLYL 104
+ HLNLQQT Q+HAHFIKTQ F ++H +PEA YNLLISSYTNN LP+A+L+ YL
Sbjct: 17 YSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASLNCYL 76
Query: 105 QIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYV 164
+ RT + +DNFI+PS+LKAC QAS LG+E+HGFA + GF +VFVCNALMNMY
Sbjct: 77 HM-RTNDAAAALDNFILPSLLKACAQASSADLGRELHGFAQKNGFASDVFVCNALMNMYE 136
Query: 165 KCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMIS 224
KCG LVSA LVFDK PERDVVSWSTMLGCYVRS FGEA+ L+REM+F G+KLS VA+IS
Sbjct: 137 KCGCLVSASLVFDKMPERDVVSWSTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALIS 196
Query: 225 MIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQ 284
+I VF L DMKSG+A+HGYI+RNV DEKMEV++TTALI MYCKCECLA AQ LFD L +
Sbjct: 197 LIGVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSLTTALIDMYCKCECLASAQRLFDRLSK 256
Query: 285 RSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWL 344
RSVVSWT MI GCIRS L EGAKNFNRMLEE++FPNEITLLSLITECGFV LDLGKW
Sbjct: 257 RSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLITECGFVKTLDLGKWF 316
Query: 345 HAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCV 404
HA+LLRNGFGMSL L TALIDMYGKCG+V YARALF+GV++KDVKIWSALISAYA VSC+
Sbjct: 317 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVKIWSALISAYAHVSCM 376
Query: 405 DQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTAL 464
DQ F LF EMLD++VKPNKVTMVSLLSLCAEAG LDLGKWTHAYI+R LE+D++L+TAL
Sbjct: 377 DQVFNLFLEMLDNEVKPNKVTMVSLLSLCAEAGTLDLGKWTHAYINRHGLEVDVILETAL 436
Query: 465 IDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPND 524
I+MY KCGD+ IAR LFDE T+RD+ MWNAMMAGFSMHGCG+EALELFSEMESHGVEPND
Sbjct: 437 INMYVKCGDVTIARSLFDEATQRDIHMWNAMMAGFSMHGCGKEALELFSEMESHGVEPND 496
Query: 525 ITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQ 584
ITFIS+FHACSHSGLV EGKKHFN+MVH FGI PK+EHYGCLVDLLGRAGHL+EAH++I+
Sbjct: 497 ITFISIFHACSHSGLVVEGKKHFNRMVHSFGIVPKMEHYGCLVDLLGRAGHLEEAHNIIE 556
Query: 585 NMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 644
NMPMRPNT++WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW D
Sbjct: 557 NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 616
Query: 645 VTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGY 704
VTS+RETM++LGMKKEPGLSWIEVNGSVHHFKSGDKTC Q KVYEMVAEMCIKL+E GY
Sbjct: 617 VTSVRETMSHLGMKKEPGLSWIEVNGSVHHFKSGDKTCTQTTKVYEMVAEMCIKLREAGY 676
Query: 705 APNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKL 764
PNT+ VLLN++EEEKESAL+YHSEKLAMAFGLISTAPGTPIRI+KNLR+CDDCH A KL
Sbjct: 677 TPNTAEVLLNIDEEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAAMKL 736
Query: 765 LSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
LSKIY RTIIVRD+NRFHHFSEGYCSCLGYW
Sbjct: 737 LSKIYARTIIVRDRNRFHHFSEGYCSCLGYW 766
BLAST of Sgr012509 vs. ExPASy TrEMBL
Match:
A0A1S3CJ58 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501009 PE=3 SV=1)
HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 598/751 (79.63%), Postives = 668/751 (88.95%), Query Frame = 0
Query: 45 HGHLNLQQTQQIHAHFIKTQ-------FDETHLSPEAKYNLLISSYTNNQLPEAALDLYL 104
+ HLNLQQT Q+HAHFIKTQ F ++H +PEA YNLLISSYTNN LP+A+L+ YL
Sbjct: 17 YSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASLNCYL 76
Query: 105 QIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYV 164
+ RT + +DNFI+PS+LKAC QAS LG+E+HGFA + GF +VFVCNALMNMY
Sbjct: 77 HM-RTNDAAAALDNFILPSLLKACAQASSADLGRELHGFAQKNGFASDVFVCNALMNMYE 136
Query: 165 KCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMIS 224
KCG LVSA LVFDK PERDVVSWSTMLGCYVRS FGEA+ L+REM+F G+KLS VA+IS
Sbjct: 137 KCGCLVSASLVFDKMPERDVVSWSTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALIS 196
Query: 225 MIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQ 284
+I VF L DMKSG+A+HGYI+RNV DEKMEV++TTALI MYCKCECLA AQ LFD L +
Sbjct: 197 LIGVFGNLLDMKSGRAVHGYIMRNVGDEKMEVSLTTALIDMYCKCECLASAQRLFDRLSK 256
Query: 285 RSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWL 344
RSVVSWT MI GCIRS L EGAKNFNRMLEE++FPNEITLLSLITECGFV LDLGKW
Sbjct: 257 RSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLITECGFVKTLDLGKWF 316
Query: 345 HAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCV 404
HA+LLRNGFGMSL L TALIDMYGKCG+V YARALF+GV++KDVKIWSALISAYA VSC+
Sbjct: 317 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVKIWSALISAYAHVSCM 376
Query: 405 DQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTAL 464
DQ F LF EMLD++VKPNKVTMVSLLSLCAEAG LDLGKWTHAYI+R LE+D++L+TAL
Sbjct: 377 DQVFNLFLEMLDNEVKPNKVTMVSLLSLCAEAGTLDLGKWTHAYINRHGLEVDVILETAL 436
Query: 465 IDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPND 524
I+MY KCGD+ IAR LFDE T+RD+ MWNAMMAGFSMHGCG+EALELFSEMESHGVEPND
Sbjct: 437 INMYVKCGDVTIARSLFDEATQRDIHMWNAMMAGFSMHGCGKEALELFSEMESHGVEPND 496
Query: 525 ITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQ 584
ITFIS+FHACSHSGLV EGKKHFN+MVH+FGI PK+EHYGCLVDLLGRAGHL+EAH++I+
Sbjct: 497 ITFISIFHACSHSGLVVEGKKHFNRMVHNFGIVPKMEHYGCLVDLLGRAGHLEEAHNIIE 556
Query: 585 NMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 644
NMPMRPNT++WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW D
Sbjct: 557 NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 616
Query: 645 VTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGY 704
VTS+RETM++LGMKKEPGLSWIEVNGSVHHFKSGDKTC Q KVYEMVAEMCIKL+E GY
Sbjct: 617 VTSVRETMSHLGMKKEPGLSWIEVNGSVHHFKSGDKTCTQTTKVYEMVAEMCIKLREAGY 676
Query: 705 APNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKL 764
PNT+ VLLN++EEEKESAL+YHSEKLAMAFGLISTAPGTPIRI+KNLR+CDDCH A KL
Sbjct: 677 TPNTAEVLLNIDEEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAAMKL 736
Query: 765 LSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
LSKIY RTIIVRD+NRFHHFSEGYCSCLGYW
Sbjct: 737 LSKIYARTIIVRDRNRFHHFSEGYCSCLGYW 766
BLAST of Sgr012509 vs. ExPASy TrEMBL
Match:
A0A0A0LYC2 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G690260 PE=3 SV=1)
HSP 1 Score: 1242.3 bits (3213), Expect = 0.0e+00
Identity = 593/751 (78.96%), Postives = 664/751 (88.42%), Query Frame = 0
Query: 45 HGHLNLQQTQQIHAHFIKTQ-------FDETHLSPEAKYNLLISSYTNNQLPEAALDLYL 104
H HLNLQQT Q+HAHFIKTQ F ++H +PEA YNLLISSYTNN LP+A+ + YL
Sbjct: 17 HSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYL 76
Query: 105 QIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYV 164
+R N +DNFI+PS+LKAC QAS G LG+E+HGFA + GF +VFVCNALMNMY
Sbjct: 77 HMR--SNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYE 136
Query: 165 KCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMIS 224
KCG LVSARLVFD+ PERDVVSW+TMLGCYVRS FGEA+ L+REM+F G+KLS VA+IS
Sbjct: 137 KCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALIS 196
Query: 225 MIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQ 284
+I VF L DMKSG+A+HGYI+RNV DEKMEV++TTALI MYCK CLA AQ LFD L +
Sbjct: 197 LIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSK 256
Query: 285 RSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWL 344
RSVVSWT MIAGCIRS L+EGAKNFNRMLEE++FPNEITLLSLITECGFVG LDLGKW
Sbjct: 257 RSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWF 316
Query: 345 HAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCV 404
HA+LLRNGFGMSL L TALIDMYGKCG+V YARALF+GVK+KDVKIWS LISAYA VSC+
Sbjct: 317 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCM 376
Query: 405 DQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTAL 464
DQ F LF EML++DVKPN VTMVSLLSLCAEAGALDLGKWTHAYI+R LE+D++L+TAL
Sbjct: 377 DQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETAL 436
Query: 465 IDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPND 524
I+MYAKCGD+ IAR LF+E +RD+ MWN MMAGFSMHGCG+EALELFSEMESHGVEPND
Sbjct: 437 INMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPND 496
Query: 525 ITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQ 584
ITF+S+FHACSHSGLV EGKK+FNKMVHDFGI PK+EHYGCLVDLLGRAGHLDEAH++I+
Sbjct: 497 ITFVSIFHACSHSGLVVEGKKYFNKMVHDFGIVPKMEHYGCLVDLLGRAGHLDEAHNIIE 556
Query: 585 NMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 644
NMPMRPNT++WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW D
Sbjct: 557 NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 616
Query: 645 VTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGY 704
VTS+RE M++ GMKKEPGLSWIEV+GSVHHFKSGDK C Q KVYEMV EMCIKL+E GY
Sbjct: 617 VTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGY 676
Query: 705 APNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKL 764
PNT+ VLLN++EEEKESAL+YHSEKLA AFGLISTAPGTPIRIVKNLR+CDDCH ATKL
Sbjct: 677 TPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKL 736
Query: 765 LSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
LSKIYGRTIIVRD+NRFHHFSEGYCSC+GYW
Sbjct: 737 LSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 765
BLAST of Sgr012509 vs. ExPASy TrEMBL
Match:
A0A6J1HA74 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111461539 PE=3 SV=1)
HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 597/751 (79.49%), Postives = 663/751 (88.28%), Query Frame = 0
Query: 45 HGHLNLQQTQQIHAHFIKTQ-------FDETHLSPEAKYNLLISSYTNNQLPEAALDLYL 104
H HLNLQQT QIHAH IKTQ F +H +PEA +NLLISSYT+N LP+AA LY
Sbjct: 16 HSHLNLQQTHQIHAHCIKTQFRNPHSFFSRSHFTPEANFNLLISSYTDNHLPQAAFILYH 75
Query: 105 QIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYV 164
+R T+ VDNFIVPS+LKAC QAS G+E+HGFAV+ GF +VFVCNALMNMY
Sbjct: 76 HMRTTD--AAAVDNFIVPSLLKACAQASSTNFGREVHGFAVKNGFVSDVFVCNALMNMYE 135
Query: 165 KCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDVAMIS 224
KCGSLVSA LVFDK P+RDVVSWSTMLGCYVRS FGEA L+REM F G+KLSDVA+IS
Sbjct: 136 KCGSLVSACLVFDKMPDRDVVSWSTMLGCYVRSKSFGEAYRLVREMHFVGVKLSDVALIS 195
Query: 225 MIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFDGLPQ 284
MI VF ELSDMKSG+A+HGY++RNV +E++E+ +TTALI MYCK + LA A LFDGL Q
Sbjct: 196 MIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKGDKLASAMRLFDGLSQ 255
Query: 285 RSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDLGKWL 344
R+VVSWTA+IAGCIRS EGAKNF+RMLEE + PNEITLLSLITECGFVGALDLGKWL
Sbjct: 256 RNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLITECGFVGALDLGKWL 315
Query: 345 HAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQVSCV 404
HA+LLRNGFGMSL LATALIDMYGKCG+V YARALF+GV+EKDVKIWSALISAYA SC+
Sbjct: 316 HAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHASCI 375
Query: 405 DQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTAL 464
DQAF LF +MLDS+VKPNKVTMVSLLSLCAE GALDLG+WTHAYI+R +E+D+VL+TAL
Sbjct: 376 DQAFSLFLKMLDSEVKPNKVTMVSLLSLCAEVGALDLGRWTHAYINRHGVEVDVVLETAL 435
Query: 465 IDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPND 524
I+MYAKCGDLK ARCLFDE TRRD+ MWNAMMAGFS+HGCG+EALELFS+M HGVEPND
Sbjct: 436 INMYAKCGDLKTARCLFDEATRRDIHMWNAMMAGFSIHGCGKEALELFSDMVCHGVEPND 495
Query: 525 ITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQ 584
ITFISVFHACSHSGLV EG KHF++MVH+FGI PKIEHYGCLVDLLGRA LD AH +I+
Sbjct: 496 ITFISVFHACSHSGLVGEGMKHFDRMVHEFGIVPKIEHYGCLVDLLGRAKRLDAAHSIIE 555
Query: 585 NMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTD 644
NMPMRPNT+VWGALLAACKLHKNLALGEVAARKILELDP+NCGY VLKSNIYAS KRWTD
Sbjct: 556 NMPMRPNTIVWGALLAACKLHKNLALGEVAARKILELDPENCGYRVLKSNIYASEKRWTD 615
Query: 645 VTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGY 704
VTS+RETM++LGMKKEPGLSWIEVNGSVHHF+SGDKTC Q RKV+EMV EMCIKL+E GY
Sbjct: 616 VTSVRETMSHLGMKKEPGLSWIEVNGSVHHFRSGDKTCTQTRKVHEMVTEMCIKLREAGY 675
Query: 705 APNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKL 764
APNTS VLLNVE+EEKESAL+YHSEKLAMAFGLISTAPGTPIRI+KNLR+CDDCH ATKL
Sbjct: 676 APNTSAVLLNVEDEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAATKL 735
Query: 765 LSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
LSKIYGRTIIVRD+NRFHHFSEGYCSCLGYW
Sbjct: 736 LSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 764
BLAST of Sgr012509 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 560.1 bits (1442), Expect = 2.9e-159
Identity = 288/719 (40.06%), Postives = 431/719 (59.94%), Query Frame = 0
Query: 73 EAKYNLLISSYTNNQLPEAALDLYLQI---RRTENGNTPVDNFIVPSVLKACGQASCGFL 132
++K N+L + + LD LQ R ++ V NF +LK CG + +
Sbjct: 96 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDEAELRV 155
Query: 133 GKEIHGFAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSWSTMLGCYVR 192
GKEIHG V+ GF ++F L NMY KC + AR VFD+ PERD+VSW+T++ Y +
Sbjct: 156 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 215
Query: 193 SNLFGEAVILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIRNVSDEKMEV 252
+ + A+ +++ M +K S + ++S++ + L + GK +HGY +R+ D V
Sbjct: 216 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL--V 275
Query: 253 AITTALIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEE 312
I+TAL+ MY KC L A+ LFDG+ +R+VVSW +MI +++ +E F +ML+E
Sbjct: 276 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 335
Query: 313 RVFPNEITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMYGKCGRVRYA 372
V P +++++ + C +G L+ G+++H + G ++ + +LI MY KC V A
Sbjct: 336 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 395
Query: 373 RALFDGVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEA 432
++F ++ + + W+A+I +AQ A F +M VKP+ T VS+++ AE
Sbjct: 396 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 455
Query: 433 GALDLGKWTHAYISRQDLELDIVLKTALIDMYAKCGDLKIARCLFDEDTRRDMSMWNAMM 492
KW H + R L+ ++ + TAL+DMYAKCG + IAR +FD + R ++ WNAM+
Sbjct: 456 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 515
Query: 493 AGFSMHGCGREALELFSEMESHGVEPNDITFISVFHACSHSGLVAEGKKHFNKMVHDFGI 552
G+ HG G+ ALELF EM+ ++PN +TF+SV ACSHSGLV G K F M ++ I
Sbjct: 516 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 575
Query: 553 APKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMRPNTVVWGALLAACKLHKNLALGEVAAR 612
++HYG +VDLLGRAG L+EA D I MP++P V+GA+L AC++HKN+ E AA
Sbjct: 576 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAE 635
Query: 613 KILELDPQNCGYSVLKSNIYASAKRWTDVTSIRETMNYLGMKKEPGLSWIEVNGSVHHFK 672
++ EL+P + GY VL +NIY +A W V +R +M G++K PG S +E+ VH F
Sbjct: 636 RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFF 695
Query: 673 SGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTSVVLLNVEEEEKESALNYHSEKLAMAFG 732
SG +K+Y + ++ +KE GY P+T++V L VE + KE L+ HSEKLA++FG
Sbjct: 696 SGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFG 755
Query: 733 LISTAPGTPIRIVKNLRVCDDCHTATKLLSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
L++T GT I + KNLRVC DCH ATK +S + GR I+VRD RFHHF G CSC YW
Sbjct: 756 LLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Sgr012509 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 550.8 bits (1418), Expect = 1.8e-156
Identity = 315/817 (38.56%), Postives = 451/817 (55.20%), Query Frame = 0
Query: 4 LILSPQSLSSSSLLPLPIQSLRPPPSPSKLKHSHPCDFLEVHGHLNLQQTQQIHAHFIKT 63
L SP ++ SSS + S PP S +HP L +H LQ + IHA IK
Sbjct: 3 LSCSPLTVPSSSYPFHFLPSSSDPPYDS--IRNHPSLSL-LHNCKTLQSLRIIHAQMIKI 62
Query: 64 QFDETH-----------LSPEAK-------------------YNLLISSYTNNQLPEAAL 123
T+ LSP + +N + + + P +AL
Sbjct: 63 GLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSAL 122
Query: 124 DLYLQIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHGFAVRIGFGGEVFVCNALM 183
LY + G P +++ P VLK+C ++ G++IHG +++G +++V +L+
Sbjct: 123 KLY--VCMISLGLLP-NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 182
Query: 184 NMYVKCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGEAVILMREMRFAGMKLSDV 243
+MYV+ G L A VFDK P RDVVS++ ++
Sbjct: 183 SMYVQNGRLEDAHKVFDKSPHRDVVSYTALI----------------------------- 242
Query: 244 AMISMIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTALIVMYCKCECLAPAQSLFD 303
G A GYI AQ LFD
Sbjct: 243 ----------------KGYASRGYI---------------------------ENAQKLFD 302
Query: 304 GLPQRSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPNEITLLSLITECGFVGALDL 363
+P + VVSW AMI+G +G +E + F M++ V P+E T++++++ C G+++L
Sbjct: 303 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 362
Query: 364 GKWLHAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFDGVKEKDVKIWSALISAYAQ 423
G+ +H + +GFG +L + ALID+Y KCG + A LF+ + KDV W+ LI Y
Sbjct: 363 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 422
Query: 424 VSCVDQAFGLFFEMLDSDVKPNKVTMVSLLSLCAEAGALDLGKWTHAYISR--QDLELDI 483
++ +A LF EML S PN VTM+S+L CA GA+D+G+W H YI + + +
Sbjct: 423 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 482
Query: 484 VLKTALIDMYAKCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESH 543
L+T+LIDMYAKCGD++ A +F+ + +S WNAM+ GF+MHG + +LFS M
Sbjct: 483 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 542
Query: 544 GVEPNDITFISVFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDE 603
G++P+DITF+ + ACSHSG++ G+ F M D+ + PK+EHYGC++DLLG +G E
Sbjct: 543 GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKE 602
Query: 604 AHDVIQNMPMRPNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYAS 663
A ++I M M P+ V+W +LL ACK+H N+ LGE A +++++P+N G VL SNIYAS
Sbjct: 603 AEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYAS 662
Query: 664 AKRWTDVTSIRETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIK 723
A RW +V R +N GMKK PG S IE++ VH F GDK + R++Y M+ EM +
Sbjct: 663 AGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 722
Query: 724 LKEVGYAPNTSVVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDC 783
L++ G+ P+TS VL +EEE KE AL +HSEKLA+AFGLIST PGT + IVKNLRVC +C
Sbjct: 723 LEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 741
Query: 784 HTATKLLSKIYGRTIIVRDQNRFHHFSEGYCSCLGYW 789
H ATKL+SKIY R II RD+ RFHHF +G CSC YW
Sbjct: 783 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Sgr012509 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 543.5 bits (1399), Expect = 2.8e-154
Identity = 289/746 (38.74%), Postives = 434/746 (58.18%), Query Frame = 0
Query: 76 YNLLISSYTNNQLPEAALDLYLQIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHG 135
YN LI Y ++ L A+ L+L R N D + P L AC ++ G +IHG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFL---RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 161
Query: 136 FAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGE 195
V++G+ ++FV N+L++ Y +CG L SAR VFD+ ER+VVSW++M+ Y R + +
Sbjct: 162 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 221
Query: 196 AV-ILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTA 255
AV + R +R + + V M+ +I A+L D+++G+ ++ + IRN E ++ + +A
Sbjct: 222 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMV-SA 281
Query: 256 LIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPN 315
L+ MY KC + A+ LFD ++ AM + +R G E FN M++ V P+
Sbjct: 282 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 341
Query: 316 EITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFD 375
I++LS I+ C + + GK H ++LRNGF + ALIDMY KC R A +FD
Sbjct: 342 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 401
Query: 376 GVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSD----------------------- 435
+ K V W+++++ Y + VD A+ F M + +
Sbjct: 402 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 461
Query: 436 ---------VKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTALIDMYA 495
V + VTM+S+ S C GALDL KW + YI + ++LD+ L T L+DM++
Sbjct: 462 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 521
Query: 496 KCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPNDITFIS 555
+CGD + A +F+ T RD+S W A + +M G A+ELF +M G++P+ + F+
Sbjct: 522 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 581
Query: 556 VFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMR 615
ACSH GLV +GK+ F M+ G++P+ HYGC+VDLLGRAG L+EA +I++MPM
Sbjct: 582 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 641
Query: 616 PNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTDVTSIR 675
PN V+W +LLAAC++ N+ + AA KI L P+ G VL SN+YASA RW D+ +R
Sbjct: 642 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 701
Query: 676 ETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTS 735
+M G++K PG S I++ G H F SGD++ + + M+ E+ + +G+ P+ S
Sbjct: 702 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 761
Query: 736 VVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKLLSKIY 789
VL++V+E+EK L+ HSEKLAMA+GLIS+ GT IRIVKNLRVC DCH+ K SK+Y
Sbjct: 762 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 821
BLAST of Sgr012509 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 540.0 bits (1390), Expect = 3.1e-153
Identity = 288/742 (38.81%), Postives = 432/742 (58.22%), Query Frame = 0
Query: 76 YNLLISSYTNNQLPEAALDLYLQIRRTENGNTPVDNFIVPSVLKACGQASCGFLGKEIHG 135
YN LI Y ++ L A+ L+L R N D + P L AC ++ G +IHG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFL---RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 161
Query: 136 FAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSWSTMLGCYVRSNLFGE 195
V++G+ ++FV N+L++ Y +CG L SAR VFD+ ER+VVSW++M+ Y R + +
Sbjct: 162 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 221
Query: 196 AV-ILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIRNVSDEKMEVAITTA 255
AV + R +R + + V M+ +I A+L D+++G+ ++ + IRN E ++ + +A
Sbjct: 222 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMV-SA 281
Query: 256 LIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGAKNFNRMLEERVFPN 315
L+ MY KC + A+ LFD ++ AM + +R G E FN M++ V P+
Sbjct: 282 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 341
Query: 316 EITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMYGKCGRVRYARALFD 375
I++LS I+ C + + GK H ++LRNGF + ALIDMY KC R A +FD
Sbjct: 342 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 401
Query: 376 GVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSD----------------------- 435
+ K V W+++++ Y + VD A+ F M + +
Sbjct: 402 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 461
Query: 436 ---------VKPNKVTMVSLLSLCAEAGALDLGKWTHAYISRQDLELDIVLKTALIDMYA 495
V + VTM+S+ S C GALDL KW + YI + ++LD+ L T L+DM++
Sbjct: 462 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 521
Query: 496 KCGDLKIARCLFDEDTRRDMSMWNAMMAGFSMHGCGREALELFSEMESHGVEPNDITFIS 555
+CGD + A +F+ T RD+S W A + +M G A+ELF +M G++P+ + F+
Sbjct: 522 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 581
Query: 556 VFHACSHSGLVAEGKKHFNKMVHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMR 615
ACSH GLV +GK+ F M+ G++P+ HYGC+VDLLGRAG L+EA +I++MPM
Sbjct: 582 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 641
Query: 616 PNTVVWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWTDVTSIR 675
PN V+W +LLAAC++ N+ + AA KI L P+ G VL SN+YASA RW D+ +R
Sbjct: 642 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 701
Query: 676 ETMNYLGMKKEPGLSWIEVNGSVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTS 735
+M G++K PG S I++ G H F SGD++ + + M+ E+ + +G+ P+ S
Sbjct: 702 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 761
Query: 736 VVLLNVEEEEKESALNYHSEKLAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKLLSKIY 785
VL++V+E+EK L+ HSEKLAMA+GLIS+ GT IRIVKNLRVC DCH+ K SK+Y
Sbjct: 762 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 821
BLAST of Sgr012509 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 539.7 bits (1389), Expect = 4.0e-153
Identity = 270/725 (37.24%), Postives = 427/725 (58.90%), Query Frame = 0
Query: 65 FDETHLSPEAKYNLLISSYTNNQLPEAALDLYLQIRRTENGNTPVDNFIVPSVLKACGQA 124
FDE + +N+L++ + ++ L+ ++ + +D++ V K+
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLF---KKMMSSGVEMDSYTFSCVSKSFSSL 211
Query: 125 SCGFLGKEIHGFAVRIGFGGEVFVCNALMNMYVKCGSLVSARLVFDKRPERDVVSWSTML 184
G+++HGF ++ GFG V N+L+ Y+K + SAR VFD+ ERDV+SW++++
Sbjct: 212 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 271
Query: 185 GCYVRSNLFGEAVILMREMRFAGMKLSDVAMISMIDVFAELSDMKSGKAMHGYIIRNVSD 244
YV + L + + + +M +G+++ ++S+ A+ + G+A+H ++
Sbjct: 272 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 331
Query: 245 EKMEVAITTALIVMYCKCECLAPAQSLFDGLPQRSVVSWTAMIAGCIRSGWLEEGAKNFN 304
E L+ MY KC L A+++F + RSVVS+T+MIAG R G E K F
Sbjct: 332 R--EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 391
Query: 305 RMLEERVFPNEITLLSLITECGFVGALDLGKWLHAHLLRNGFGMSLPLATALIDMYGKCG 364
M EE + P+ T+ +++ C LD GK +H + N G + ++ AL+DMY KCG
Sbjct: 392 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 451
Query: 365 RVRYARALFDGVKEKDVKIWSALISAYAQVSCVDQAFGLFFEMLDSD-VKPNKVTMVSLL 424
++ A +F ++ KD+ W+ +I Y++ ++A LF +L+ P++ T+ +L
Sbjct: 452 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 511
Query: 425 SLCAEAGALDLGKWTHAYISRQDLELDIVLKTALIDMYAKCGDLKIARCLFDEDTRRDMS 484
CA A D G+ H YI R D + +L+DMYAKCG L +A LFD+ +D+
Sbjct: 512 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 571
Query: 485 MWNAMMAGFSMHGCGREALELFSEMESHGVEPNDITFISVFHACSHSGLVAEGKKHFNKM 544
W M+AG+ MHG G+EA+ LF++M G+E ++I+F+S+ +ACSHSGLV EG + FN M
Sbjct: 572 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 631
Query: 545 VHDFGIAPKIEHYGCLVDLLGRAGHLDEAHDVIQNMPMRPNTVVWGALLAACKLHKNLAL 604
H+ I P +EHY C+VD+L R G L +A+ I+NMP+ P+ +WGALL C++H ++ L
Sbjct: 632 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 691
Query: 605 GEVAARKILELDPQNCGYSVLKSNIYASAKRWTDVTSIRETMNYLGMKKEPGLSWIEVNG 664
E A K+ EL+P+N GY VL +NIYA A++W V +R+ + G++K PG SWIE+ G
Sbjct: 692 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 751
Query: 665 SVHHFKSGDKTCIQPRKVYEMVAEMCIKLKEVGYAPNTSVVLLNVEEEEKESALNYHSEK 724
V+ F +GD + + + + ++ ++ E GY+P T L++ EE EKE AL HSEK
Sbjct: 752 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 811
Query: 725 LAMAFGLISTAPGTPIRIVKNLRVCDDCHTATKLLSKIYGRTIIVRDQNRFHHFSEGYCS 784
LAMA G+IS+ G IR+ KNLRVC DCH K +SK+ R I++RD NRFH F +G+CS
Sbjct: 812 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 871
Query: 785 CLGYW 789
C G+W
Sbjct: 872 CRGFW 871
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156625.1 | 0.0e+00 | 79.06 | pentatricopeptide repeat-containing protein At3g62890-like [Momordica charantia] | [more] |
XP_038879151.1 | 0.0e+00 | 80.29 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benin... | [more] |
KAA0062552.1 | 0.0e+00 | 79.63 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK28774... | [more] |
XP_008462708.1 | 0.0e+00 | 79.63 | PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-... | [more] |
XP_011660280.1 | 0.0e+00 | 78.96 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial [Cucumis sa... | [more] |
Match Name | E-value | Identity | Description | |
Q3E6Q1 | 4.1e-158 | 40.06 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 2.5e-155 | 38.56 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 3.9e-153 | 38.74 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 5.7e-152 | 37.24 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9SUH6 | 1.1e-150 | 38.19 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DQU9 | 0.0e+00 | 79.06 | pentatricopeptide repeat-containing protein At3g62890-like OS=Momordica charanti... | [more] |
A0A5A7V2V9 | 0.0e+00 | 79.63 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CJ58 | 0.0e+00 | 79.63 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cuc... | [more] |
A0A0A0LYC2 | 0.0e+00 | 78.96 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G6902... | [more] |
A0A6J1HA74 | 0.0e+00 | 79.49 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT1G11290.1 | 2.9e-159 | 40.06 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 1.8e-156 | 38.56 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.2 | 2.8e-154 | 38.74 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT3G22690.1 | 3.1e-153 | 38.81 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT4G18750.1 | 4.0e-153 | 37.24 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |