Sgr012492 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr012492
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00153419: 25573 .. 26376 (+)
RNA-Seq ExpressionSgr012492
SyntenySgr012492
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGGGCTAGTCAATCAAAAGAAAAAAAAATGTGTGCGACAAAACAAATAATTAAGAGGCGAGAGAGTTATAGTGCATGAGGGTTTTCAACTTCAGGTTGAATTTGGAGGCTGGGAGTTCAATTTTGACAATAATGAAGTTTCAACTTCTTTTTTTTTTACTAACCTTGGCTACAGTTTATTTTAATACTTTTTTTTTTGTTATAAATACTAAAGTATATATCTTATTCTAATAGATAGAAAGATTTTTCTCAAAATTAAGTTCAAAACTAATTATTTAAAATTTGAAATTGCTATTTGAATATAATAAAGGACTCTCTTATAATTAATTTGAAAAGTTTTGACTAACTAAGGATAAAATTTAATTTGTAAAAATTAGCTTTTTTTTTTTAAAAAAATCAACAATTCAAAACCAAAGAAAATTCGAGGTGTTACAATGTGGATGCCTCTAGCAAAGATGGGTGGAGGAGGATCGGGCTTGGAGCGGTGATTCAAGACTCTGAATGGAACATGGTTGGGACATAGGTGAAATCGGTCTCGGCTTCGTCGGATGTCCAATCGGCTGAAGCCCTTGCAATGTTGGAAGGCTTGAAGCTAGCTACTCTCTGTGGGTTCCAAGTAATTTCTGTGGAGTCAAACTCCCTCACGGTGTTAAGCTTGCTCAACAATGGTGACTATGGGTTTTCTCCTTCAAGCGTGATTCTCTATGAAGTTAGGAGGCAGATGAGGATTCATGACATAAACGAAGTGAAGTTTGTAAGTAGATCTTTTAATGTTGTGGCCTATTGTATTGCGGGCTAG

mRNA sequence

ATGGTGAAATCGGTCTCGGCTTCGTCGGATGTCCAATCGGCTGAAGCCCTTGCAATGTTGGAAGGCTTGAAGCTAGCTACTCTCTGTGGGTTCCAAGTAATTTCTGTGGAGTCAAACTCCCTCACGGTGTTAAGCTTGCTCAACAATGGTGACTATGGGTTTTCTCCTTCAAGCGTGATTCTCTATGAAGTTAGGAGGCAGATGAGGATTCATGACATAAACGAAGTGAAGTTTGTAAGTAGATCTTTTAATGTTGTGGCCTATTGTATTGCGGGCTAG

Coding sequence (CDS)

ATGGTGAAATCGGTCTCGGCTTCGTCGGATGTCCAATCGGCTGAAGCCCTTGCAATGTTGGAAGGCTTGAAGCTAGCTACTCTCTGTGGGTTCCAAGTAATTTCTGTGGAGTCAAACTCCCTCACGGTGTTAAGCTTGCTCAACAATGGTGACTATGGGTTTTCTCCTTCAAGCGTGATTCTCTATGAAGTTAGGAGGCAGATGAGGATTCATGACATAAACGAAGTGAAGTTTGTAAGTAGATCTTTTAATGTTGTGGCCTATTGTATTGCGGGCTAG

Protein sequence

MVKSVSASSDVQSAEALAMLEGLKLATLCGFQVISVESNSLTVLSLLNNGDYGFSPSSVILYEVRRQMRIHDINEVKFVSRSFNVVAYCIAG
Homology
The following BLAST results are available for this feature:
BLAST of Sgr012492 vs.
Match NameE-valueIdentityDescription
BLAST of Sgr012492 vs.
Match NameE-valueIdentityDescription
BLAST of Sgr012492 vs.
Match NameE-valueIdentityDescription
BLAST of Sgr012492 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 4..91
e-value: 7.7E-13
score: 48.3
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 10..91
e-value: 3.43116E-14
score: 60.7908

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr012492.1Sgr012492.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity