Sgr012076 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr012076
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	tig00153207: 80346 .. 88844 (-)
RNA-Seq Expression	Sgr012076
Synteny	Sgr012076

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTACGATGTCTTTATTGTTAGAAAAATCATCGGAGCTCGAGCATATCGCAGCCGCCGTTCCACCTGGTGATGTTAGAAGTCCGAGAGATACAAACGGCCATGGGACACACACTGCGTCGACGGCGAGAGGAGGGGTTCCCTCTGCGCGCATTGCTGTGTACAAGATCTGTTGGTCCGATGGGTGCTTCGACGCCGACATTCTTGCAGCGTTCGACGACATAATTGCCGACAGCGTGGATATTATATCTCTTTCAGTGGGGCCGAAGAAACCGAAGCCTTACTTGGAGGATTCCATTGCCATCGGAACTTTCCACGCCATGAAACATGGAATATTGACGTCCAACTCCGCCGGAAATAATGGCCCCAAATACTACACCACCGCTAACGGCGCTCCGTGGTCTCTTTCTGTGGCCGCAAGCTCCATTGACAGAAAGTTCAAGGCACAAGTGCAGCTTGGCAACGGAAATATCTATCAGGTCATATTATTTTCTTGCTAAAATATATAATTTCATCTTTAATATCAACACTATTTTTTAAATTTCGTCTTTAATGTATGAAATTTTTTTAATTAAGTCCCTCATCGTTAAAATTCATAAACGTTTTGCTGATGTGGCATTAAAATATGGTTAAAAAATAGAAATATAATTGAAAAATATTAATACATAAGAAATAAAATTGAATATGATACTAGGGCGACCAGGAGGGGGATTGATGGGGGCATGGGAAGGGGCAGAGGGAGATAGATGAGAGAGCGTGAGGAGAGAGAGAGTAGGAGGAGAGACACAAAATGATTTTTTCTTTAAAAAAAAATGCCACGTCAAAATGTTTTCCAGGTAAGCTCGCCACATTAGTCTATTTAAAGTCTCCTTTTGTTTTGAGGTTTAACAGTAAGAAGGAACCATTTAAACTTATTTTTCAAAACTCAGGAGTTAAAGTGCATCATTTAAAAATTGAGGGACCAAAGTAACATATTTAACGAAGATTTAGAGACCAAAAGAATAATGTTGCCAAAATATTTATACATAAGGAATAAAATTGAAAATGTCTATGAATAATTGTGTAGATTTCTATTTTAATTTTCTTTTACCATATTTTCGATGTAGTACCTAATGTTTATTTTAAGTTTCAATTTTACCCTTTATGTAATAACATTTTCAATCACATCTCTACTGTTTAAATAAATAATATTTCTCAAACGTTATGAACGAATAAAAACTTAAAAAATATTAGAGATGAAATTGAAAAATGATACATACATTGGGGATAAAATTGTATACCTAACCTTATTTTCTTATGTCACAATCTAAATAAGACATGAAACATGCAAGATCTCAAATGTTTGGAATGGGCTTATCACTTTGTTGATAATTATAAATTATAATAACAAGCTTGTTTTTACATTTTCACATGATCGATGATTGTCGTAGATGGTTGATTGATGTATGTTATATTTTTTGCAATATATATAGTTATTTTTTTCATTACAATTTTTTTAATATTTAATATTTAGTATGTTATATTTGTGTCATTTGCCCTTTTTTTGACACATGAGATCTTGAGACTTTATTTTTGATTTTTGATTTGGCTGTTTTTATATATTTGAAATACTATAATTTTAATAAACCATTTTTTTTTAATGTTGGAATATAATTAGAAAAATGTTGAAAGGGTAAGGTATATAATATAATATTATTTACATGGGTGCAGGGAGTTGCAATTAACACATTTGATCTTATGGGAAGACAATATCCCTTAATTTATGCTGGAGATGCACCTAACGTTGATGGAGGTTTCTCTAAATATACCTCCAGGTAATTAGGAACTTGTTTATAACATGGGCTAAATAGAAGTATAATTCAAACTTAAAATAGATAATTAATTTTTTTAAAAGAAATTCAAAGACTATATATAAATATAAGAATTAAAGTGCATGTACTAAATTTATAATTTAACCTATATTCAACGTGAAGTCAAATTAGGTTAGAGTTAATATTTAACAAATAAGTGGTTTACACTAATATTTTGATGAAATAAAATACAACATATTAGAAAGTAATTTCAAACTTTTGGTGCGGAGGTAAGTTATTTATTTATTGGTTAAATTACAAATTTATTCATGAACTTTGATAATAGTATCTATTTAGTATATGAACTTTAAAATAATTTTAATTGTCCTTGAATTTTGTATTTTGATTCTAATAAATCTGTTAATACTCTTATTTAAATGTTCACATATAACATGTAGATTGAACGAACACGCGATGAATTAGCACGATATGGTAACATATGACACAAGGGAGTATGTTAGCTGGATAAAATAATGGAGGGCAGGTAAAAAAATTCGATTTGAAATATATTCCACCTGTTAGTCCCATTGAATTTTTGGCCCACCTACCTTTGTTTTATCCAGCTAGCTTGTTCTCTTGTGCTACGTCGTACTAAATCATCATTTATTAGTTCAATCATCATACCACATCAACATTTAAGTAACGAGATTAGCAACACAAATGCTAATTATAATCAAAATTGACAGTTTTGGAATGACAATTGAAATTTTTTGAAGTTTATAAACTAAATAGACATAACCATATCAAAGTTTAGAGATTAAATATTTGATTGTAGTCGGATTATGACATTAGCTCTAGGGTTTTAAGCTAACATGTTGAGTTTAATTGAAATAGATATTGTTATGAAAACTCAGTGGATCTCAACTTGGTGAGGGGAAAAATCCTTCTTTGCGATTCAATGCGGCATCCTAAAGTATTCCATTCCTTCAATGGCGCCGCCGGCGTCGTGATGCATGACGGCGGAGCGAAGGATTACGGCAGGTCCTATCCCTTGCCGGCTTCCTACCTCGACAAAGAAGACGGCAATGCCATTAAACTCTACATGTCTTCAACCTCGTACGTTTCAACTAAAAAACAACCTTCAAATAATGGAGCTTATTTGTGTTTCAGATATTGACTTGAAGTTTAATCTTTTGGCCCACAGAGCTTCGACTGCAACCATTTTAAAGAGTATCATAGTGAATGATACATCTGCTCCTGTTGTAGGTTCTTTCTCCTCTAGGGGACCCAATTACATAACTCCCGACATTCTCAAGGTTAATTTTGTTCGTTTTTCAATTGAAAATAAACTGTCTTTTCTATGTGTGTTCACGACTTGCTAAGATCATTAGTCTCCATGAACTTGGCATGCAGCCAGATTTGACTGCTCCAGGGGTTGAAATTCTAGCCGCATGGTCTCCACTTGCGCCGGTCTCTGGAGTTGCAGGAGATTCGAGGAGTGTGCTTTATAATATAATATCAGGGACGTCAATGGCTTGCCCACATGTCACTGCAATTGCTGCATATGTCAAAACATTCCATCCCACGTGGTCTCCTGCTGCCATAAAGTCAGCTCTCATGACAACTGGTAAGAACAATACTTGTCTGCATATTGGTTGGTAAGAGTCTAGCAAGTATTTTTCAATGAGTAATGGATGACATTGACTCTTTAACTCACTTCTGTCGATTCAATTTCATACAGCTTCTCCCATGAGTGCCAAACTCAATAAAGAAGCGGAGTTTGCGTATGGTTCAGGCCATGTCAACCCACTCAAAGCAGTGGATCCTGGGTTGGTCTATGATGCGAGTGAAAGCGACTATGTGAAATTCTTATGTGGGCAAGGTTACACCACCACCAAGGTCCAACGTATCACCGGTGACAATAGTACTTGTACTTCCGACAATATTGGAAGAGTTTGGGATCTAAACTATCCTTCTTTTGGACTTTCAATAGCCTCCTATTCAAAACCCATCAACCAATCCTTCAGTAGAACTCTCACCAATGTTGGATTTGAAGCATCTACATATAGAGCTACAATTATTTCCCCATCAAGCCTCAACATCATTGTGAATCCTCCCGTTCTATCATTCTGTGAAGACAAATCATTAGAAGTCTGTTAAGAAAGGTTTACCGGTTGGTTGTTATACTGTTAATAGTTAGTTAACGTAAGCTTGTAAACTATTCGTTTCACAGAGGATTTCTATATAAACCTCTGGCTGCTCATTTCCAAGATAGATGAAATATAATACATCTTATGAGCAACTTCCTTCTGTCTCTCTTCTTCTCTGCTTTGCATACGTTATCATGGTATCAGAGCTAATCGTCTAGCAACACCCAAGATCCTGCAAATTAAAGAGCAAGTTATGGAAGAAACAAATACACAGCAATCGGTGACTCTGGGCATTAATCCTGGAAGTCACACCAAGGTAATTACACTTACCGAAAGCAATTATCTTGTTTGGAAACTTCAGATTCTCAGAACGCTACAGGGATATGGACTCGAAGATTATATTCTCGACGATGATGGAACCCCGTCTCTGTATCTTAGTTCTACTAATGATGGATCCCCGTCCACAGTGGAAGAAGCCAATCCCGCACATTTACTTTGGACCCGTCAAGATCGTCTAATCTCTTCGTGGCTTCTCAGTTCGATGACAGAGGGAGTTCTTGAAGATGTGCTTGACTGTGAGACATCTCGCGAAATTTGGAAAACATTAGAAGAAATGTATGTTACAAGCAATTTGGCAAAAAATATGAGCTACAAGAATCAGATGCAAAACCTGAAGAAAGGAGGCATGACTCTAAAAGAATACTTTTCAAAGATGAAGAAACTGGCAGATTCTTTAAAGGCCATTGGAGAAAAGGTATCCACTAAAGACCATATCATTTATATTCTCTCTGGATTGGGTGTCGAATATGATGCTATAGTATCTGTTATCACTGCCAAATCTAGACCTTTGACACTACAAGAAGTTTATGGATTACTGTATGCTCATGAGTCAAGGTCAGAAAGAAGCACTGTGAATATTGATGGTTCTGTGCCCACAGTAAACCTAACTCAACAAAGTTCATCCAAGAAAGGTACTGGTTCTACCAATGATCAAAAGAATGGTTCATCATATCACAACAATGGTCCTAATTCCTTCAGAGGTCGTGGAGGACGCAATTTCAGAGGAAACAGAGGTTGGAATGGTAATAAACCACAGTGTCAACTATGTGGACGTTTTGGACACACAGCTTTGAAATGTTATCAGCGATTTGATCCAAACTTCCATGGAAACAATGGTGGTCTTAACCATCAAGGCAATCAAATGGTTCAACAACCTTTTCAGCAGTCTTTCTCTGGTAATAATAGCGTGGGCAATCAAAATTATCCTATGCAAAGTCACCCTATGCAGGCTATGATGGTGGCTCCCAATATTAATCTTGATACCAATTGGTATCCCGATTCAGGAGCTTCAAATCATGTGACGAATGATTTTGGTAATCTTGCAGTGAGTTCTCCTTGCACTAGTGACAATAGAGTTCATGTCGGTAATGGGGCAGGTTTGTCTATCAATCATATTGGCTCTTCTCATTTGTACTCCTCTAATAACCAATCCTTTTTACTCAATAACCTCTTACATGTTCCCCATATTACTAAGAATCTTTTGAGTGTCAGCCAATTTGCTAAAGATAATGATGTCTTTTTTGAATTCCATCCTCTTGTCTGTTTTGTGAAGGACCGTCAGACTGGTACAATTCTGCTCCAAGGACTGATGCATGAAGGACTGTACAAGTTTCATCTCCACCCTTCCAAAACTCAAGATTTGAAGCAAGCATCCCTGGTTCCTCCTCTGTCTTCTTCCTCCTCTACCACAGCTCATGTTTTAGCTTGTACCTCTGAAAATACTAAAGCCAATGTAATAGATCTGTGGCATAAAAGACTTGGTCATGCTGCCACTCCAATTGTATCCCAAATTTTAAAGGAATGCAATATTTCTTTTACTAATAATTCTACTTCCTTTTGTTCTGCCTGTGCAATTGGTAAAAGTCATGCCCTTCCATTTTACCCTTCACAGACTATTATTAGTACACCCCTGTCTCTTATCGAAACCGATCTTTGGGGACCAGCTGTTAAAAGCTCCAAAAATGGTTTCAGATACTATATCAGTTTTGTTGATGTCTACTCTCGTTTCACTTGGGTTTATTTTCTTCAGTCCAAATCCGAGGCTTATTCTACCTTTCTTACTTTTAAAATACATGTGGAAAAACTTCTTGGTCATTCAATTAAAATGTTACAAACTGATGGGGGTGGTGAGTTTCGTGCTCTTGCCCCATACTTAAAGTCTCAGGGTATTATTCATAGAGTTACTTGTCCCTACACCTCCCAACAAAATGGTATAGTTGAGCGTAAGCATAGGCACATTGTTGATATGGGACTGACCTTACTTTCTCAGGCTTCCCTTCCTCTTGAGTTTTGGGACGATGCGTTTTCAGCAGCAGTCTATACCATTAATCGGTTGCCTACTACAGTCCTAAGTGGCATCAGTCCTGTGGAGAAATTGTTCGGTAAGAAACCTGATTATTCCTTTTTTAAAACCTTTGGCTGCTTATGTTTTCCATGCTTACGACCCTACAATGACCATAAACTCCAATTTCGTTCTGCTCCTTGTGTTTTTCTTGGCTATAGCAATATGCACAGGGGCTACAAATGTTTAGATAGAACTGGACGTGTTTTTATTTCAAGACATGTTCAGTTTAATGAATCTTCTTTTCCATATCTTCAGTCTTTCTTACATTCCTCCTCTGTCAAGCCTTTGCCTATACACTCATCTATCAACTCTTTCCTACCTGTGTTGATTTCGTCTCCTACTTCTTCCCAGTTTACATCTACTTCTCAGCCTTCTACTATTGTTCCTACCTCCCAACCCTTGGATCCTGCCACTGAGGTTGCTATTGCTTCCCCATCTGCATCCACTTCACATTCTCCTTTGACTAATATTGATCTTTCCCATATACCTGAACCAAATCTGACATCTACTCCTATTGTCACTAACACTCACCCTATGGTTACTCGCTCAAAAAATGGTATTGTTTGCCCCAAGGTACTACTTGCAGAATACATTGAGGTTGAACCGACTACTGTGAAAGAGGCCTTACGTTGTCCTCATTGGCTTCAAGCAATGAAAGATGAATATGCTGCCCTTATGAAAAATGGAACTTGGTCTCTTGTACCTCATTCTTCTACCCACAAAACAATCGGTTGTAAGTGGGTTTTTAAAATAAAGCGAAATACGGATGGCTCCATTGCTAGGTATAAGGCACGCTTAGTTGCAAAAGGATTTCATCAAATGGCAGACATTGACTACACTGAAACTTTTAGTCCAGTTATTAAGCCCACGACAATACGTGTCTTACTTACTTATGCATTGGCTAATGGTTGGCAGATTCATCAACTGGATATTAATAATGCTTTTCTTCATGGTGTTCTTACTGAGGATGTTTTCATGGAGCAGCCTCCGGGATTCTCTATCTCTGGCTCTTCACCTCTGGTTTGTAAACTCCATAAAGCACTTTATGGACTCAAGCAAGCCCCACGAGCATGGTTTGATAGACTGTCTTCCTTTTTACTTGCTCTCGGTTTCAAATGTTCTAAAGCTGACACCTCTCTTCTTTTTCGCCATGTTGGTTCATCCAAATGCTATATACTGATCTATGTCGATGATATAGTCATCATGGGCTCTTCATCTTCTGAAATTACTCAGCTTATATCCTTGCTAAATCATCAGTTTTCCTTGAAAGATCTTGGTAGGCTGAATTATTTTCTTGGTATTGAGGTCTCTTATCCAAAGGATGGAGGTTTATTCCTCTCTCAAACCAAGTATATTACTGATCTTCTTCATAAGGCCAAGATGTTTGAAGCTAATCCTATTACTACTCCCATGGTAAGTGGCTCTGTAGTTTCTGCCTTTAATGGAGAAAAATTTTCTGATGTTCATTTTTATAGAAGTATTGTGGGGGCCTTACAGTATGCTACAATCACTAGACCAGAAATTGCTTATAGTGTGAACAAGGTGTGTCAATTTATGCATTCTCCTACTCAAGTTCACTGGCAGGCGGTCAAGAGGATTCTTAGATATCTCAAGGGTTCATTCACTTCAGGCCTTTTGCTTCGGAAGCCATCTAATCTTGGACTATATGGCTATGCGGATGCTGATTGGGCCTCAGACCCAGATGACCGCAAATCAACCTCTGGTTTCTGCATTTTCTTTGGTGGAAATCTTGTAACCTGGGGCTCGAAGAAGCAGAGCATTATCTCACGCTCCAGCACTGAGGCTGAGTTCAGAAGCCTGGCAAATACATCAGCAGAGTTAATCTGGTTGCAAGCTCTTTTAGCTGAGTTACAAATCCCTACTTCTCGTCCACCCATCTTATGGTGTGACAACTTGGGAGCTGTTCATCTCAGTGCTAATCCAGTTTTGCATTCTCGAACAAAACATGTTGAGTTAGACATCTACTTTGTCCGCGATTTGGTTCTCCAAAAGAGACTCATGATTCAACACCTTCCAGCATTTGCCCAACTTGCTGATATATTTACAAAGCCCCTGTCTGCTACTTCCTTTCTGCATATTCGTTCCAAGCTCAATGTCTGTGATGCTTATGACATTGGCTTGAGGGGGGTGTGA

mRNA sequence

ATGCTTACGATGTCTTTATTGTTAGAAAAATCATCGGAGCTCGAGCATATCGCAGCCGCCGTTCCACCTGGTGATGTTAGAAGTCCGAGAGATACAAACGGCCATGGGACACACACTGCGTCGACGGCGAGAGGAGGGGTTCCCTCTGCGCGCATTGCTGTGTACAAGATCTGTTGGTCCGATGGGTGCTTCGACGCCGACATTCTTGCAGCGTTCGACGACATAATTGCCGACAGCGTGGATATTATATCTCTTTCAGTGGGGCCGAAGAAACCGAAGCCTTACTTGGAGGATTCCATTGCCATCGGAACTTTCCACGCCATGAAACATGGAATATTGACGTCCAACTCCGCCGGAAATAATGGCCCCAAATACTACACCACCGCTAACGGCGCTCCGTGGTCTCTTTCTGTGGCCGCAAGCTCCATTGACAGAAAGTTCAAGGCACAAGTGCAGCTTGGCAACGGAAATATCTATCAGGGAGTTGCAATTAACACATTTGATCTTATGGGAAGACAATATCCCTTAATTTATGCTGGAGATGCACCTAACGTTGATGGAGGTTTCTCTAAATATACCTCCAGAGCTAATCGTCTAGCAACACCCAAGATCCTGCAAATTAAAGAGCAAGTTATGGAAGAAACAAATACACAGCAATCGGTGACTCTGGGCATTAATCCTGGAAGTCACACCAAGGTAATTACACTTACCGAAAGCAATTATCTTGTTTGGAAACTTCAGATTCTCAGAACGCTACAGGGATATGGACTCGAAGATTATATTCTCGACGATGATGGAACCCCGTCTCTGTATCTTAGTTCTACTAATGATGGATCCCCGTCCACAGTGGAAGAAGCCAATCCCGCACATTTACTTTGGACCCGTCAAGATCGTCTAATCTCTTCGTGGCTTCTCAGTTCGATGACAGAGGGAGTTCTTGAAGATGTGCTTGACTGTGAGACATCTCGCGAAATTTGGAAAACATTAGAAGAAATGTATGTTACAAGCAATTTGGCAAAAAATATGAGCTACAAGAATCAGATGCAAAACCTGAAGAAAGGAGGCATGACTCTAAAAGAATACTTTTCAAAGATGAAGAAACTGGCAGATTCTTTAAAGGCCATTGGAGAAAAGGTATCCACTAAAGACCATATCATTTATATTCTCTCTGGATTGGGTGTCGAATATGATGCTATAGTATCTGTTATCACTGCCAAATCTAGACCTTTGACACTACAAGAAGTTTATGGATTACTGTATGCTCATGAGTCAAGGTCAGAAAGAAGCACTGTGAATATTGATGGTTCTGTGCCCACAGTAAACCTAACTCAACAAAGTTCATCCAAGAAAGGTACTGGTTCTACCAATGATCAAAAGAATGGTTCATCATATCACAACAATGGTCCTAATTCCTTCAGAGGTCGTGGAGGACGCAATTTCAGAGGAAACAGAGGTTGGAATGGTAATAAACCACAGTGTCAACTATGTGGACGTTTTGGACACACAGCTTTGAAATGTTATCAGCGATTTGATCCAAACTTCCATGGAAACAATGGTGGTCTTAACCATCAAGGCAATCAAATGGTTCAACAACCTTTTCAGCAGTCTTTCTCTGGTAATAATAGCGTGGGCAATCAAAATTATCCTATGCAAAGTCACCCTATGCAGGCTATGATGGTGGCTCCCAATATTAATCTTGATACCAATTGGTATCCCGATTCAGGAGCTTCAAATCATGTGACGAATGATTTTGGTAATCTTGCAGTGAGTTCTCCTTGCACTAGTGACAATAGAGTTCATGTCGGTAATGGGGCAGGTTTGTCTATCAATCATATTGGCTCTTCTCATTTGTACTCCTCTAATAACCAATCCTTTTTACTCAATAACCTCTTACATGTTCCCCATATTACTAAGAATCTTTTGAGTGTCAGCCAATTTGCTAAAGATAATGATGTCTTTTTTGAATTCCATCCTCTTGTCTGTTTTGTGAAGGACCGTCAGACTGGTACAATTCTGCTCCAAGGACTGATGCATGAAGGACTGTACAAGTTTCATCTCCACCCTTCCAAAACTCAAGATTTGAAGCAAGCATCCCTGGTTCCTCCTCTGTCTTCTTCCTCCTCTACCACAGCTCATGTTTTAGCTTGTACCTCTGAAAATACTAAAGCCAATGTAATAGATCTGTGGCATAAAAGACTTGGTCATGCTGCCACTCCAATTGTATCCCAAATTTTAAAGGAATGCAATATTTCTTTTACTAATAATTCTACTTCCTTTTGTTCTGCCTGTGCAATTGGTAAAAGTCATGCCCTTCCATTTTACCCTTCACAGACTATTATTAGTACACCCCTGTCTCTTATCGAAACCGATCTTTGGGGACCAGCTGTTAAAAGCTCCAAAAATGGTTTCAGATACTATATCAGTTTTGTTGATGTCTACTCTCGTTTCACTTGGGTTTATTTTCTTCAGTCCAAATCCGAGGCTTATTCTACCTTTCTTACTTTTAAAATACATGTGGAAAAACTTCTTGGTCATTCAATTAAAATGTTACAAACTGATGGGGGTGGTGAGTTTCGTGCTCTTGCCCCATACTTAAAGTCTCAGGGTATTATTCATAGAGTTACTTGTCCCTACACCTCCCAACAAAATGGTATAGTTGAGCGTAAGCATAGGCACATTGTTGATATGGGACTGACCTTACTTTCTCAGGCTTCCCTTCCTCTTGAGTTTTGGGACGATGCGTTTTCAGCAGCAGTCTATACCATTAATCGGTTGCCTACTACAGTCCTAAGTGGCATCAGTCCTGTGGAGAAATTGTTCGGTAAGAAACCTGATTATTCCTTTTTTAAAACCTTTGGCTGCTTATGTTTTCCATGCTTACGACCCTACAATGACCATAAACTCCAATTTCGTTCTGCTCCTTGTGTTTTTCTTGGCTATAGCAATATGCACAGGGGCTACAAATGTTTAGATAGAACTGGACGTGTTTTTATTTCAAGACATGTTCAGTTTAATGAATCTTCTTTTCCATATCTTCAGTCTTTCTTACATTCCTCCTCTGTCAAGCCTTTGCCTATACACTCATCTATCAACTCTTTCCTACCTGTGTTGATTTCGTCTCCTACTTCTTCCCAGTTTACATCTACTTCTCAGCCTTCTACTATTGTTCCTACCTCCCAACCCTTGGATCCTGCCACTGAGGTTGCTATTGCTTCCCCATCTGCATCCACTTCACATTCTCCTTTGACTAATATTGATCTTTCCCATATACCTGAACCAAATCTGACATCTACTCCTATTGTCACTAACACTCACCCTATGGTTACTCGCTCAAAAAATGGTATTGTTTGCCCCAAGGTACTACTTGCAGAATACATTGAGGTTGAACCGACTACTGTGAAAGAGGCCTTACGTTGTCCTCATTGGCTTCAAGCAATGAAAGATGAATATGCTGCCCTTATGAAAAATGGAACTTGGTCTCTTGTACCTCATTCTTCTACCCACAAAACAATCGGTTGTAAGTGGGTTTTTAAAATAAAGCGAAATACGGATGGCTCCATTGCTAGGTATAAGGCACGCTTAGTTGCAAAAGGATTTCATCAAATGGCAGACATTGACTACACTGAAACTTTTAGTCCAGTTATTAAGCCCACGACAATACGTGTCTTACTTACTTATGCATTGGCTAATGGTTGGCAGATTCATCAACTGGATATTAATAATGCTTTTCTTCATGGTGTTCTTACTGAGGATGTTTTCATGGAGCAGCCTCCGGGATTCTCTATCTCTGGCTCTTCACCTCTGGTTTGTAAACTCCATAAAGCACTTTATGGACTCAAGCAAGCCCCACGAGCATGGTTTGATAGACTGTCTTCCTTTTTACTTGCTCTCGGTTTCAAATGTTCTAAAGCTGACACCTCTCTTCTTTTTCGCCATGTTGGTTCATCCAAATGCTATATACTGATCTATGTCGATGATATAGTCATCATGGGCTCTTCATCTTCTGAAATTACTCAGCTTATATCCTTGCTAAATCATCAGTTTTCCTTGAAAGATCTTGGTAGGCTGAATTATTTTCTTGGTATTGAGGTCTCTTATCCAAAGGATGGAGGTTTATTCCTCTCTCAAACCAAGTATATTACTGATCTTCTTCATAAGGCCAAGATGTTTGAAGCTAATCCTATTACTACTCCCATGGTAAGTGGCTCTGTAGTTTCTGCCTTTAATGGAGAAAAATTTTCTGATGTTCATTTTTATAGAAGTATTGTGGGGGCCTTACAGTATGCTACAATCACTAGACCAGAAATTGCTTATAGTGTGAACAAGGTGTGTCAATTTATGCATTCTCCTACTCAAGTTCACTGGCAGGCGGTCAAGAGGATTCTTAGATATCTCAAGGGTTCATTCACTTCAGGCCTTTTGCTTCGGAAGCCATCTAATCTTGGACTATATGGCTATGCGGATGCTGATTGGGCCTCAGACCCAGATGACCGCAAATCAACCTCTGGTTTCTGCATTTTCTTTGGTGGAAATCTTGTAACCTGGGGCTCGAAGAAGCAGAGCATTATCTCACGCTCCAGCACTGAGGCTGAGTTCAGAAGCCTGGCAAATACATCAGCAGAGTTAATCTGGTTGCAAGCTCTTTTAGCTGAGTTACAAATCCCTACTTCTCGTCCACCCATCTTATGGTGTGACAACTTGGGAGCTGTTCATCTCAGTGCTAATCCAGTTTTGCATTCTCGAACAAAACATGTTGAGTTAGACATCTACTTTGTCCGCGATTTGGTTCTCCAAAAGAGACTCATGATTCAACACCTTCCAGCATTTGCCCAACTTGCTGATATATTTACAAAGCCCCTGTCTGCTACTTCCTTTCTGCATATTCGTTCCAAGCTCAATGTCTGTGATGCTTATGACATTGGCTTGAGGGGGGTGTGA

Coding sequence (CDS)

ATGCTTACGATGTCTTTATTGTTAGAAAAATCATCGGAGCTCGAGCATATCGCAGCCGCCGTTCCACCTGGTGATGTTAGAAGTCCGAGAGATACAAACGGCCATGGGACACACACTGCGTCGACGGCGAGAGGAGGGGTTCCCTCTGCGCGCATTGCTGTGTACAAGATCTGTTGGTCCGATGGGTGCTTCGACGCCGACATTCTTGCAGCGTTCGACGACATAATTGCCGACAGCGTGGATATTATATCTCTTTCAGTGGGGCCGAAGAAACCGAAGCCTTACTTGGAGGATTCCATTGCCATCGGAACTTTCCACGCCATGAAACATGGAATATTGACGTCCAACTCCGCCGGAAATAATGGCCCCAAATACTACACCACCGCTAACGGCGCTCCGTGGTCTCTTTCTGTGGCCGCAAGCTCCATTGACAGAAAGTTCAAGGCACAAGTGCAGCTTGGCAACGGAAATATCTATCAGGGAGTTGCAATTAACACATTTGATCTTATGGGAAGACAATATCCCTTAATTTATGCTGGAGATGCACCTAACGTTGATGGAGGTTTCTCTAAATATACCTCCAGAGCTAATCGTCTAGCAACACCCAAGATCCTGCAAATTAAAGAGCAAGTTATGGAAGAAACAAATACACAGCAATCGGTGACTCTGGGCATTAATCCTGGAAGTCACACCAAGGTAATTACACTTACCGAAAGCAATTATCTTGTTTGGAAACTTCAGATTCTCAGAACGCTACAGGGATATGGACTCGAAGATTATATTCTCGACGATGATGGAACCCCGTCTCTGTATCTTAGTTCTACTAATGATGGATCCCCGTCCACAGTGGAAGAAGCCAATCCCGCACATTTACTTTGGACCCGTCAAGATCGTCTAATCTCTTCGTGGCTTCTCAGTTCGATGACAGAGGGAGTTCTTGAAGATGTGCTTGACTGTGAGACATCTCGCGAAATTTGGAAAACATTAGAAGAAATGTATGTTACAAGCAATTTGGCAAAAAATATGAGCTACAAGAATCAGATGCAAAACCTGAAGAAAGGAGGCATGACTCTAAAAGAATACTTTTCAAAGATGAAGAAACTGGCAGATTCTTTAAAGGCCATTGGAGAAAAGGTATCCACTAAAGACCATATCATTTATATTCTCTCTGGATTGGGTGTCGAATATGATGCTATAGTATCTGTTATCACTGCCAAATCTAGACCTTTGACACTACAAGAAGTTTATGGATTACTGTATGCTCATGAGTCAAGGTCAGAAAGAAGCACTGTGAATATTGATGGTTCTGTGCCCACAGTAAACCTAACTCAACAAAGTTCATCCAAGAAAGGTACTGGTTCTACCAATGATCAAAAGAATGGTTCATCATATCACAACAATGGTCCTAATTCCTTCAGAGGTCGTGGAGGACGCAATTTCAGAGGAAACAGAGGTTGGAATGGTAATAAACCACAGTGTCAACTATGTGGACGTTTTGGACACACAGCTTTGAAATGTTATCAGCGATTTGATCCAAACTTCCATGGAAACAATGGTGGTCTTAACCATCAAGGCAATCAAATGGTTCAACAACCTTTTCAGCAGTCTTTCTCTGGTAATAATAGCGTGGGCAATCAAAATTATCCTATGCAAAGTCACCCTATGCAGGCTATGATGGTGGCTCCCAATATTAATCTTGATACCAATTGGTATCCCGATTCAGGAGCTTCAAATCATGTGACGAATGATTTTGGTAATCTTGCAGTGAGTTCTCCTTGCACTAGTGACAATAGAGTTCATGTCGGTAATGGGGCAGGTTTGTCTATCAATCATATTGGCTCTTCTCATTTGTACTCCTCTAATAACCAATCCTTTTTACTCAATAACCTCTTACATGTTCCCCATATTACTAAGAATCTTTTGAGTGTCAGCCAATTTGCTAAAGATAATGATGTCTTTTTTGAATTCCATCCTCTTGTCTGTTTTGTGAAGGACCGTCAGACTGGTACAATTCTGCTCCAAGGACTGATGCATGAAGGACTGTACAAGTTTCATCTCCACCCTTCCAAAACTCAAGATTTGAAGCAAGCATCCCTGGTTCCTCCTCTGTCTTCTTCCTCCTCTACCACAGCTCATGTTTTAGCTTGTACCTCTGAAAATACTAAAGCCAATGTAATAGATCTGTGGCATAAAAGACTTGGTCATGCTGCCACTCCAATTGTATCCCAAATTTTAAAGGAATGCAATATTTCTTTTACTAATAATTCTACTTCCTTTTGTTCTGCCTGTGCAATTGGTAAAAGTCATGCCCTTCCATTTTACCCTTCACAGACTATTATTAGTACACCCCTGTCTCTTATCGAAACCGATCTTTGGGGACCAGCTGTTAAAAGCTCCAAAAATGGTTTCAGATACTATATCAGTTTTGTTGATGTCTACTCTCGTTTCACTTGGGTTTATTTTCTTCAGTCCAAATCCGAGGCTTATTCTACCTTTCTTACTTTTAAAATACATGTGGAAAAACTTCTTGGTCATTCAATTAAAATGTTACAAACTGATGGGGGTGGTGAGTTTCGTGCTCTTGCCCCATACTTAAAGTCTCAGGGTATTATTCATAGAGTTACTTGTCCCTACACCTCCCAACAAAATGGTATAGTTGAGCGTAAGCATAGGCACATTGTTGATATGGGACTGACCTTACTTTCTCAGGCTTCCCTTCCTCTTGAGTTTTGGGACGATGCGTTTTCAGCAGCAGTCTATACCATTAATCGGTTGCCTACTACAGTCCTAAGTGGCATCAGTCCTGTGGAGAAATTGTTCGGTAAGAAACCTGATTATTCCTTTTTTAAAACCTTTGGCTGCTTATGTTTTCCATGCTTACGACCCTACAATGACCATAAACTCCAATTTCGTTCTGCTCCTTGTGTTTTTCTTGGCTATAGCAATATGCACAGGGGCTACAAATGTTTAGATAGAACTGGACGTGTTTTTATTTCAAGACATGTTCAGTTTAATGAATCTTCTTTTCCATATCTTCAGTCTTTCTTACATTCCTCCTCTGTCAAGCCTTTGCCTATACACTCATCTATCAACTCTTTCCTACCTGTGTTGATTTCGTCTCCTACTTCTTCCCAGTTTACATCTACTTCTCAGCCTTCTACTATTGTTCCTACCTCCCAACCCTTGGATCCTGCCACTGAGGTTGCTATTGCTTCCCCATCTGCATCCACTTCACATTCTCCTTTGACTAATATTGATCTTTCCCATATACCTGAACCAAATCTGACATCTACTCCTATTGTCACTAACACTCACCCTATGGTTACTCGCTCAAAAAATGGTATTGTTTGCCCCAAGGTACTACTTGCAGAATACATTGAGGTTGAACCGACTACTGTGAAAGAGGCCTTACGTTGTCCTCATTGGCTTCAAGCAATGAAAGATGAATATGCTGCCCTTATGAAAAATGGAACTTGGTCTCTTGTACCTCATTCTTCTACCCACAAAACAATCGGTTGTAAGTGGGTTTTTAAAATAAAGCGAAATACGGATGGCTCCATTGCTAGGTATAAGGCACGCTTAGTTGCAAAAGGATTTCATCAAATGGCAGACATTGACTACACTGAAACTTTTAGTCCAGTTATTAAGCCCACGACAATACGTGTCTTACTTACTTATGCATTGGCTAATGGTTGGCAGATTCATCAACTGGATATTAATAATGCTTTTCTTCATGGTGTTCTTACTGAGGATGTTTTCATGGAGCAGCCTCCGGGATTCTCTATCTCTGGCTCTTCACCTCTGGTTTGTAAACTCCATAAAGCACTTTATGGACTCAAGCAAGCCCCACGAGCATGGTTTGATAGACTGTCTTCCTTTTTACTTGCTCTCGGTTTCAAATGTTCTAAAGCTGACACCTCTCTTCTTTTTCGCCATGTTGGTTCATCCAAATGCTATATACTGATCTATGTCGATGATATAGTCATCATGGGCTCTTCATCTTCTGAAATTACTCAGCTTATATCCTTGCTAAATCATCAGTTTTCCTTGAAAGATCTTGGTAGGCTGAATTATTTTCTTGGTATTGAGGTCTCTTATCCAAAGGATGGAGGTTTATTCCTCTCTCAAACCAAGTATATTACTGATCTTCTTCATAAGGCCAAGATGTTTGAAGCTAATCCTATTACTACTCCCATGGTAAGTGGCTCTGTAGTTTCTGCCTTTAATGGAGAAAAATTTTCTGATGTTCATTTTTATAGAAGTATTGTGGGGGCCTTACAGTATGCTACAATCACTAGACCAGAAATTGCTTATAGTGTGAACAAGGTGTGTCAATTTATGCATTCTCCTACTCAAGTTCACTGGCAGGCGGTCAAGAGGATTCTTAGATATCTCAAGGGTTCATTCACTTCAGGCCTTTTGCTTCGGAAGCCATCTAATCTTGGACTATATGGCTATGCGGATGCTGATTGGGCCTCAGACCCAGATGACCGCAAATCAACCTCTGGTTTCTGCATTTTCTTTGGTGGAAATCTTGTAACCTGGGGCTCGAAGAAGCAGAGCATTATCTCACGCTCCAGCACTGAGGCTGAGTTCAGAAGCCTGGCAAATACATCAGCAGAGTTAATCTGGTTGCAAGCTCTTTTAGCTGAGTTACAAATCCCTACTTCTCGTCCACCCATCTTATGGTGTGACAACTTGGGAGCTGTTCATCTCAGTGCTAATCCAGTTTTGCATTCTCGAACAAAACATGTTGAGTTAGACATCTACTTTGTCCGCGATTTGGTTCTCCAAAAGAGACTCATGATTCAACACCTTCCAGCATTTGCCCAACTTGCTGATATATTTACAAAGCCCCTGTCTGCTACTTCCTTTCTGCATATTCGTTCCAAGCTCAATGTCTGTGATGCTTATGACATTGGCTTGAGGGGGGTGTGA

Protein sequence

MLTMSLLLEKSSELEHIAAAVPPGDVRSPRDTNGHGTHTASTARGGVPSARIAVYKICWSDGCFDADILAAFDDIIADSVDIISLSVGPKKPKPYLEDSIAIGTFHAMKHGILTSNSAGNNGPKYYTTANGAPWSLSVAASSIDRKFKAQVQLGNGNIYQGVAINTFDLMGRQYPLIYAGDAPNVDGGFSKYTSRANRLATPKILQIKEQVMEETNTQQSVTLGINPGSHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSSTNDGSPSTVEEANPAHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQMQNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVITAKSRPLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTGSTNDQKNGSSYHNNGPNSFRGRGGRNFRGNRGWNGNKPQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPMQSHPMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSINHIGSSHLYSSNNQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQTGTILLQGLMHEGLYKFHLHPSKTQDLKQASLVPPLSSSSSTTAHVLACTSENTKANVIDLWHKRLGHAATPIVSQILKECNISFTNNSTSFCSACAIGKSHALPFYPSQTIISTPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVEKLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTLLSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCLRPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSFLHSSSVKPLPIHSSINSFLPVLISSPTSSQFTSTSQPSTIVPTSQPLDPATEVAIASPSASTSHSPLTNIDLSHIPEPNLTSTPIVTNTHPMVTRSKNGIVCPKVLLAEYIEVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTIGCKWVFKIKRNTDGSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFLHGVLTEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKADTSLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEVSYPKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVGALQYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLYGYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIWLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELDIYFVRDLVLQKRLMIQHLPAFAQLADIFTKPLSATSFLHIRSKLNVCDAYDIGLRGV

Homology

[Close]

BLAST of Sgr012076 vs. NCBI nr
Match: RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 711/1486 (47.85%), Postives = 934/1486 (62.85%), Query Frame = 0


Query: 215  TNTQQSVTLGINPGSHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSS 274
            T T +S+ + I+P S    + L + N+L+WK QI   ++GYGLE ++   +  P   ++ 
Sbjct: 133  TTTDESLRMVISPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVT- 192

Query: 275  TNDGSPSTVEEANPAHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYV 334
                    V   NP    + RQD L+ SWLLSS+    L  V+ C ++ E+W T+ + + 
Sbjct: 193  ----DKIGVLVPNPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFN 252

Query: 335  TSNLAKNMSYKNQMQNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGV 394
            + + AK M YK+QMQ LKK G+T+++Y +KMK   D L   G K+S  DHI+ I+ GLG 
Sbjct: 253  SQSSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGD 312

Query: 395  EYDAIVSVITAKSRPLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTGS 454
            EY+++++VI++K    +LQ V   L AHE R      + D S   VN T Q S++  + S
Sbjct: 313  EYESVIAVISSKKSSPSLQYVTSTLIAHEGRIAHKISSNDLS---VNYTSQYSNRGPSSS 372

Query: 455  TNDQ------------------KNGSSYHNNGPNSFRGRGGRNFRGNRGWNGNKPQCQLC 514
             N                      GS  HN G    RGRG       R   G KPQCQLC
Sbjct: 373  WNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRG----RGRG-------RAQGGIKPQCQLC 432

Query: 515  GRFGHTALKCYQRFDPNFHGN---NGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPMQSH 574
             +FGHT  +C+ R+DPNFHGN   NG          +     S S   +V    Y  Q +
Sbjct: 433  NKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLTEYDAQEN 492

Query: 575  ----PMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSI 634
                 M+AM+  P    +  W+PDSGA+NHVT+D GNL   +    ++++H+GNG GL I
Sbjct: 493  QDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKI 552

Query: 635  NHIGSSHLYSSN--NQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQ 694
            +HIG S   SS+  N+   L N+L VP I KNLLSVSQFA+DN+V+FEFHP VCFVKD+ 
Sbjct: 553  SHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKS 612

Query: 695  TGTILLQGLMHEGLYKFHLHP---SKTQDLKQASLVPPLSSSSSTTAHVLAC---TSENT 754
              ++LLQG +H+GLY+F+L      K   L  ++    L+  +++  H          N+
Sbjct: 613  NHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNS 672

Query: 755  KANVIDLWHKRLGHAATPIVSQILKECNISF-TNNSTSFCSACAIGKSHALPFYPSQTII 814
              +V DLWHKRLGH A+ IV+Q+L +  I F T + +S CSAC +GKSH LPF  SQT+ 
Sbjct: 673  SFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKSHNLPFPISQTVY 732

Query: 815  STPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVE 874
            + PL L+ +DLWGPA  +S  GF YY+SFVD YSR+TWVYFL++KS+    FL FK   E
Sbjct: 733  TKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQTREAFLMFKAQAE 792

Query: 875  KLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTL 934
               G  +K  QTD GGEFR+L  Y +  GIIHR++CP+TS+QNGI+ERKHRHIV++GLTL
Sbjct: 793  LQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTL 852

Query: 935  LSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCL 994
            L+QASLPL++W DAFS AV+ INRLPT VL    P E LF  KP+YS  K FGCLCFP L
Sbjct: 853  LAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHL 912

Query: 995  RPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSF----- 1054
            RPYN HKL FRS+PC FLGYS+ H+GYKCL++ GR+FISR V F+E+ FP+         
Sbjct: 913  RPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQKPVQ 972

Query: 1055 LHSSSVKPLPIHSSINSFLPVLISSPTSSQFTSTSQP---------STIVPTSQPL---D 1114
            + S S   LP    + +  P+ + SP+ S  TS++Q          S I    Q L   D
Sbjct: 973  IVSHSTVGLPCIPLVKNLEPLSV-SPSLSLPTSSAQSSHQLDENLGSDIRSVQQDLSNTD 1032

Query: 1115 PATEVAIASPSASTSHS----------PL-TNIDLSHIPEPNLTSTPIV--TNTHPMVTR 1174
             ++ V I + SAS   S          PL TN D    P  ++ + P+      H MVTR
Sbjct: 1033 SSSTVPILNESASIPSSSNLYALPGTIPLSTNSD---EPNESINTRPVTFPQQPHHMVTR 1092

Query: 1175 SKNGIVCPKVLLAEYIEVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKT 1234
            SKNGI  PKV   +    EP T +EA+  P W +AM +E+ ALMKN TWSLV   +   +
Sbjct: 1093 SKNGIFKPKVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTS 1152

Query: 1235 IGCKWVFKIKRNTDGSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALAN 1294
            +GC+WVFK+KRN DGS++RYKARLVAKG+ Q+   D+ ETFSPV+KPTTIRV+L  A++ 
Sbjct: 1153 VGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQ 1212

Query: 1295 GWQIHQLDINNAFLHGVLTEDVFMEQPPGF--SISGSSPLVCKLHKALYGLKQAPRAWFD 1354
             W I QLD+NNAFL+G L E+V+M+QPPGF    +    LVCKLHKALYGLKQAPRAWFD
Sbjct: 1213 SWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFD 1272

Query: 1355 RLSSFLLALGFKCSKADTSLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQF 1414
            +L   L   GF  +K+D SL  R    S  ++L+YVDDIV+ GSSS EI +LIS L   F
Sbjct: 1273 KLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLF 1332

Query: 1415 SLKDLGRLNYFLGIEVSYPKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAF 1474
            SLKDLG L+YFLGIE                  DLL K KM  A  + TPM+SG  +SA 
Sbjct: 1333 SLKDLGELSYFLGIE------------------DLLKKTKMDGAKSLPTPMLSGLKLSAG 1392

Query: 1475 NGEKFSDVHFYRSIVGALQYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGS 1534
             G+   +V  YRS+VGALQY TITRPEIA+SVNKVCQFM  P   HW+AVKRILRYL G+
Sbjct: 1393 MGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGT 1452

Query: 1535 FTSGLLLRKPSNLGLYGYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSST 1594
               G++L+    + L G+ DADW SD DDR+STSG C+F G +LV+W SKKQ   SRSST
Sbjct: 1453 TDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSST 1512

Query: 1595 EAEFRSLANTSAELIWLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELD 1635
            EAE+RSLA+ ++E++WLQ+LL+ELQ   +  P++WCDN+  V LSANPVLHSRTKH+ELD
Sbjct: 1513 EAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELD 1572

[Close]

BLAST of Sgr012076 vs. NCBI nr
Match: RVW44519.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1266.1 bits (3275), Expect = 0.0e+00
Identity = 709/1486 (47.71%), Postives = 925/1486 (62.25%), Query Frame = 0


Query: 215  TNTQQSVTLGINPGSHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSS 274
            T T +S+ + I+P S    + L + N+L+WK QI   ++GYGLE ++   +  P   ++ 
Sbjct: 26   TTTDESLRMVISPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVT- 85

Query: 275  TNDGSPSTVEEANPAHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYV 334
                    V   NP    + RQD L+ SWLLSS+    L  V+ C ++ E          
Sbjct: 86   ----DKIGVLVPNPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFE---------- 145

Query: 335  TSNLAKNMSYKNQMQNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGV 394
                                G+T+++Y +KMK   D L   G K+S  DHI+ I+ GLG 
Sbjct: 146  -------------------DGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGD 205

Query: 395  EYDAIVSVITAKSRPLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTGS 454
            EY+++++VI++K    +LQ V   L AHE R      + D S   VN T Q S++  + S
Sbjct: 206  EYESVIAVISSKKSSPSLQYVTSTLIAHEGRIAHKISSNDLS---VNYTSQYSNRGPSSS 265

Query: 455  TNDQ------------------KNGSSYHNNGPNSFRGRGGRNFRGNRGWNGNKPQCQLC 514
             N                      GS  HN G    RGRG       R   G KPQCQLC
Sbjct: 266  WNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRG----RGRG-------RAQGGIKPQCQLC 325

Query: 515  GRFGHTALKCYQRFDPNFHGN---NGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPMQSH 574
             +FGHT  +C+ R+DPNFHGN   NG          +     S S   +V    Y  Q +
Sbjct: 326  NKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLTEYDAQEN 385

Query: 575  ----PMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSI 634
                 M+AM+  P    +  W+PDSGA+NHVT+D GNL   +    ++++H+GNG GL I
Sbjct: 386  QDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKI 445

Query: 635  NHIGSSHLYSSN--NQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQ 694
            +HIG S   SS+  N+   L N+L VP I KNLLSVSQFA+DN+V+FEFHP VCFVKD+ 
Sbjct: 446  SHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKS 505

Query: 695  TGTILLQGLMHEGLYKFHLHP---SKTQDLKQASLVPPLSSSSSTTAHVLAC---TSENT 754
              ++LLQG +H+GLY+F+L      K   L  ++    L+  +++  H          N+
Sbjct: 506  NHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNS 565

Query: 755  KANVIDLWHKRLGHAATPIVSQILKECNISF-TNNSTSFCSACAIGKSHALPFYPSQTII 814
              +V DLWHKRLGH A+ IV+Q+L +  I F T + +S CSAC +GKSH LPF  SQT+ 
Sbjct: 566  SFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKSHNLPFPISQTVY 625

Query: 815  STPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVE 874
            + PL L+ +DLWGPA  +S  GF YY+SFVD YSR+TWVYFL++KS+    FL FK   E
Sbjct: 626  TKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQTREAFLMFKAQAE 685

Query: 875  KLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTL 934
               G  +K  QTD GGEFR+L  Y +  GIIHR++CP+TS+QNGI+ERKHRHIV++GLTL
Sbjct: 686  LQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTL 745

Query: 935  LSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCL 994
            L+QASLPL++W DAFS AV+ INRLPT VL    P E LF  KP+YS  K FGCLCFP L
Sbjct: 746  LAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHL 805

Query: 995  RPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSF----- 1054
            RPYN HKL FRS+PC FLGYS+ H+GYKCL++ GR+FISR V F+E+ FP+         
Sbjct: 806  RPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQKPVQ 865

Query: 1055 LHSSSVKPLPIHSSINSFLPVLISSPTSSQFTSTSQP---------STIVPTSQPL---D 1114
            + S S   LP    + +  P+ + SP+ S  TS++Q          S I    Q L   D
Sbjct: 866  IVSHSTVGLPCIPLVKNLEPLSV-SPSLSLPTSSAQSSHQLDENLGSDIRSVQQDLSNTD 925

Query: 1115 PATEVAIASPSASTSHS----------PL-TNIDLSHIPEPNLTSTPIV--TNTHPMVTR 1174
             ++ V I + SAS   S          PL TN D    P  ++ + P+      H MVTR
Sbjct: 926  SSSTVPILNESASIPSSSNLYALPGTIPLSTNSD---EPNESINTRPVTFPQQPHHMVTR 985

Query: 1175 SKNGIVCPKVLLAEYIEVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKT 1234
            SKNGI  PKV   +    EP T +EA+  P W +AM +E+ ALMKN TWSLV   +   +
Sbjct: 986  SKNGIFKPKVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTS 1045

Query: 1235 IGCKWVFKIKRNTDGSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALAN 1294
            +GC+WVFK+KRN DGS++RYKARLVAKG+ Q+   D+ ETFSPV+KPTTIRV+L  A++ 
Sbjct: 1046 VGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQ 1105

Query: 1295 GWQIHQLDINNAFLHGVLTEDVFMEQPPGF--SISGSSPLVCKLHKALYGLKQAPRAWFD 1354
             W I QLD+NNAFL+G L E+V+M+QPPGF    +    LVCKLHKALYGLKQAPRAWFD
Sbjct: 1106 SWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFD 1165

Query: 1355 RLSSFLLALGFKCSKADTSLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQF 1414
            +L   L   GF  +K+D SL  R    S  ++L+YVDDIV+ GSSS EI +LIS L   F
Sbjct: 1166 KLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLF 1225

Query: 1415 SLKDLGRLNYFLGIEVSYPKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAF 1474
            SLKDLG L+YFLGIEV    DGGL LSQ KYI DLL K KM  A  + TPM+SG  +SA 
Sbjct: 1226 SLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAG 1285

Query: 1475 NGEKFSDVHFYRSIVGALQYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGS 1534
             G+   +V  YRS+VGALQY TITRPEIA+SVNKVCQFM  P   HW+AVKRILRYL G+
Sbjct: 1286 MGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGT 1345

Query: 1535 FTSGLLLRKPSNLGLYGYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSST 1594
               G++L+    + L G+ DADW SD DDR+STSG C+F G +LV+W SKKQ   SRSST
Sbjct: 1346 TDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSST 1405

Query: 1595 EAEFRSLANTSAELIWLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELD 1635
            EAE+RSLA+ ++E++WLQ+LL+ELQ   +  P++WCDN+  V LSANPVLHSRTKH+ELD
Sbjct: 1406 EAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELD 1459

[Close]

BLAST of Sgr012076 vs. NCBI nr
Match: CAN81099.1 (hypothetical protein VITISV_017741 [Vitis vinifera])

HSP 1 Score: 1237.2 bits (3200), Expect = 0.0e+00
Identity = 687/1473 (46.64%), Postives = 920/1473 (62.46%), Query Frame = 0


Query: 229  SHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSSTNDGSPSTVEEANP 288
            +H+  + L   N+L+WK QI+  ++GYGL+ ++  DD     +       SP  + +   
Sbjct: 28   NHSLSVKLDNKNFLIWKQQIVSAIRGYGLQKFVFSDDEVQFNF-------SPEKMRDL-- 87

Query: 289  AHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQM 348
                   + +L +S   SS    +    L           LE+ + +   AK   +K Q+
Sbjct: 88   -------EKQLRNS---SSGNNRINYCSLGFSHLFLSQYFLEQYFASQTRAKAKQFKTQL 147

Query: 349  QNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVITAKSR 408
            Q+ KKGG T+ EY +K+K   DSL ++G  +STKDH+  IL GL  +Y++ V+ +  ++ 
Sbjct: 148  QHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESILDGLPNDYESFVTSVILRND 207

Query: 409  PLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTG------STNDQKNGS 468
              +++E+  LL AHESR E++  ++D S P+ ++   ++ +KG        + N Q + S
Sbjct: 208  DFSVEEIEALLMAHESRVEKNNNSLDSS-PSAHVASSNAVEKGNRFKQDYYAANSQGSHS 267

Query: 469  SYH---------------------NNGPNSFRGRGGRNFRGNRG-------WNGN----K 528
             Y+                     N   N    RGG   RGN+G       WN +    K
Sbjct: 268  GYNGGFGRGGDFGRRGGFYGGRGFNWNYNGRSNRGGFRGRGNKGSFQARPPWNSDNQNEK 327

Query: 529  PQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPM 588
            P CQLCG+ GH   +CY RFD  F               Q P  Q+ S  NS     Y  
Sbjct: 328  PACQLCGKIGHVVAQCYYRFDHTF---------------QVP--QNLSSRNSSPRAYYSF 387

Query: 589  QSHPMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSIN 648
             S  +  ++    +  D NWYPDSGASNHVT +  NL  S+     N+VHVGNG GLSI 
Sbjct: 388  -SPQVNGVIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIK 447

Query: 649  HIGSSHLYSS-NNQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQTG 708
            HIG S   S  +++  LLN+LLHVP ITKNLLSVS+FAKDN VFFEFH   CFVKD+ T 
Sbjct: 448  HIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQ 507

Query: 709  TILLQGLMHEGLYKF---HLHPSKTQDLKQASLVPPLSSSSSTTAHVLACTSENTKANVI 768
             +L+ G + +GLY F   HL    TQ L ++  V   S SS        CT+  + ++  
Sbjct: 508  AVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSK------VCTT--SLSSTF 567

Query: 769  DLWHKRLGHAATPIVSQILKECNISFTNN-STSFCSACAIGKSHALPFYPSQTIISTPLS 828
            DLWHKRLGH +   +  +L +CN++  N   ++FCS+C +GK H  PF  S T  + PL 
Sbjct: 568  DLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLE 627

Query: 829  LIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVEKLLGH 888
            LI  DLWGP +  S +G+RYYI FVD +SRF+W++ L++KSEA  TF+ FK  VE     
Sbjct: 628  LIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDL 687

Query: 889  SIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTLLSQAS 948
             IK LQTD GGEFRA   YL   GI+HRV+CP+T QQNG+ ERKHR IV+ GLTLL  AS
Sbjct: 688  KIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTAS 747

Query: 949  LPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCLRPYND 1008
            LPL+FWD++F   VY  NRLPT +L    P+E LF   PDYSF K FGC CFP LRPYN 
Sbjct: 748  LPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNT 807

Query: 1009 HKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSFLHS----SSV 1068
            HKLQ+RS  C FLGYS  H+GYKC+   GRV+IS  V FNE+SFPY ++   S    S+V
Sbjct: 808  HKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLSTV 867

Query: 1069 KPLPIHSSINSFLPVL----ISSPTS--SQFTSTSQPSTIVPTSQPLDPATEVAIASPSA 1128
             P   H S ++  PVL    + +PTS  S     S+   IV T  P  P +     +P+ 
Sbjct: 868  SPSTSHLSPSASPPVLSPTMLPTPTSPISSARPISEMDNIVST-HPHAPNSADTTLTPAQ 927

Query: 1129 STSHSPLTNID--LSHIPEPNLTST--PIVTNTHPMVTRSKNGIVCPKVLLAEYIEVEPT 1188
              S+   T +   +S I + ++T T      NTHPM+TR+K+GIV PK+ +A     EP+
Sbjct: 928  VVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIAAI--REPS 987

Query: 1189 TVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTIGCKWVFKIKRNTDGSIARYK 1248
            +V  AL+   W +AM  EY AL +N TWSLVP  +  + IGCKWV+K K N DG++ +YK
Sbjct: 988  SVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYK 1047

Query: 1249 ARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFLHGVLTED 1308
            ARLVAKGFHQ A  D+TETFSPV+KP+T+RV+ T AL+  W I QLD+NNAFL+G L E+
Sbjct: 1048 ARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEE 1107

Query: 1309 VFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKADTSLLFR 1368
            VFM+QP GF    +  LVC+LHKALYGLKQAPRAWF++L   LL+ GF  +K+D SL  R
Sbjct: 1108 VFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLR 1167

Query: 1369 HVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEVSYPKDGG 1428
               +   Y+L+YVDDI+++GS ++ IT LI+ LN +FSLKDLG ++YFLGI+VS+  + G
Sbjct: 1168 FTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSH-TNNG 1227

Query: 1429 LFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVGALQYATI 1488
            L LSQTKYI DLL K KM    P  TP+ +G  +   +G+   D+H YRS VGALQY TI
Sbjct: 1228 LHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTI 1287

Query: 1489 TRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLYGYADADW 1548
            TRPE+++SVNKVCQFM +PT+ HW+ VKRILRYL+G+   GL L+K SNL L G+ DADW
Sbjct: 1288 TRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADW 1347

Query: 1549 ASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIWLQALLAE 1608
            ASD DDR+STSG C+F G NL++W SKKQ I+SRSS E E+RSLA   AE+ WL++LL+E
Sbjct: 1348 ASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLLSE 1407

Query: 1609 LQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELDIYFVRDLVLQKRLMIQHLPAFAQ 1645
            LQ+P ++PP++WCDNL  V LSANPVLH+RTKH+ELD+YFVR+ V++K + ++H+P+  Q
Sbjct: 1408 LQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVPSADQ 1450

[Close]

BLAST of Sgr012076 vs. NCBI nr
Match: RVX14937.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1199.9 bits (3103), Expect = 0.0e+00
Identity = 669/1478 (45.26%), Postives = 896/1478 (60.62%), Query Frame = 0


Query: 229  SHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSSTNDGSPSTVEEANP 288
            +H+  + L   N+L+WK QI+  ++GYGL+ ++  DD  P  +L+  +  S    +E   
Sbjct: 26   NHSLSVKLDNKNFLIWKQQIVSAIRGYGLQKFVFSDDEVPVQFLTREDARSGKATKE--- 85

Query: 289  AHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQM 348
              L W +QD+L+ SWLLSS++E +L  ++ C+TS  +W  LE+ + +   AK   +K Q+
Sbjct: 86   -FLEWEQQDQLLLSWLLSSVSESILPRLVGCDTSSLLWGRLEQYFASQTRAKAKQFKTQL 145

Query: 349  QNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVITAKSR 408
            Q+ KKGG T+ EY +K+K   DSL ++G  +STKDH+  IL GL  +Y++ ++ +  ++ 
Sbjct: 146  QHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESILDGLPNDYESFITSVILRND 205

Query: 409  PLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTG------STNDQKNGS 468
              +++E+  LL AHESR E++  ++D S P+ ++   ++ +KG        + N Q N S
Sbjct: 206  DFSVEEIEALLMAHESRVEKNNSSLDSS-PSAHVASSNAVEKGNRFKQDYYAANSQGNHS 265

Query: 469  SYHN------------------------NGPNS---FRGRGGRNFRGNRG-------WNG 528
             Y+                         NG ++   FRGRGG   RGNRG       WN 
Sbjct: 266  GYNGSFGRGGDFGRRGGFNGGRGFNWNYNGRSNRGGFRGRGGFRGRGNRGNFQARPPWNS 325

Query: 529  N----KPQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQMVQQPFQQSFSGNNSVG 588
            +    KP CQLCG+ GH   +CY RFD  F               Q P  Q+ SG N   
Sbjct: 326  DNQNEKPACQLCGKIGHVVAQCYYRFDHTF---------------QVP--QNLSGRNPSP 385

Query: 589  NQNYPMQSHPMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNG 648
               Y   S  +  ++    +  D NWYPDSGASNHVT +  NL  S      N+VHVGNG
Sbjct: 386  RAYYSF-SPQVNGVIPTSEVFSDDNWYPDSGASNHVTPNPANLMKSVEFAGQNQVHVGNG 445

Query: 649  AGLSINHIGSSHLYSSNNQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVK 708
             G                                                  +P    V 
Sbjct: 446  TG--------------------------------------------------NPSCSNV- 505

Query: 709  DRQTGTILLQGLMHEGLYKF---HLHPSKTQDLKQASLVPPLSSSSSTTAHVLACTSENT 768
                      G + +GLY F   HL    TQ L ++  V   S SS      L+ T    
Sbjct: 506  ----------GKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCIASLSST---- 565

Query: 769  KANVIDLWHKRLGHAATPIVSQILKECNISFTNN-STSFCSACAIGKSHALPFYPSQTII 828
                 DLWHKRLG  +   +  +L +CN++  N   ++FCS+C +GK H  PF  S T  
Sbjct: 566  ----FDLWHKRLGQPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHMFPFSLSHTTY 625

Query: 829  STPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVE 888
            + PL LI +DLWGPA   S +G+RYYI FVD +SRF+W++ L++KSEA  TF+ FK  VE
Sbjct: 626  TKPLELIHSDLWGPAPVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVE 685

Query: 889  KLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTL 948
                  IK LQTD GGEFRA   YL   GI+HRV+CP+T QQNG+ ERKHR IV+ GLTL
Sbjct: 686  LQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTL 745

Query: 949  LSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCL 1008
            L   SLPL+FWD++F   VY  NRLPT VL    P+E LF   PDYSF K FGC CFP L
Sbjct: 746  LHTVSLPLKFWDESFRTVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFPNL 805

Query: 1009 RPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSFLHS-- 1068
            RPYN HKLQ+RS  C FLGYS  H+GYKC+   GRV+ISR V FNE+SFPY ++   S  
Sbjct: 806  RPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISRDVIFNETSFPYSKTIQVSSC 865

Query: 1069 --SSVKPLPIHSSINSFLPVL----ISSPTS--SQFTSTSQPSTIVPTSQPLDPATEVAI 1128
              S+V P   H S ++  PVL    + +PTS  S     S+   IV T  P  P +    
Sbjct: 866  LPSTVSPSTSHLSPSASPPVLSPTMLPAPTSPISSARPISEMDNIVST-HPHAPNSADTT 925

Query: 1129 ASPSASTSHSPLTNID--LSHIPEPNLTST--PIVTNTHPMVTRSKNGIVCPKVLLAEYI 1188
             +P+   S+   T +   +S I + ++T T      NTHPM+TR+K+GIV PK+ +A   
Sbjct: 926  LTPAQVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIAAV- 985

Query: 1189 EVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTIGCKWVFKIKRNTDGS 1248
              EP++V  AL+   W +AM  EY AL +N TWSLVP  +  + IGCKWV+K K N DG+
Sbjct: 986  -REPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGT 1045

Query: 1249 IARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFLHG 1308
            + +YKARLVAKGFHQ A  D+TETFSPV+KP+TIRV+ T AL+  W I QLD+NNAFL+G
Sbjct: 1046 VQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTIRVVFTIALSRNWAIKQLDVNNAFLNG 1105

Query: 1309 VLTEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKADT 1368
             L E+VFM+QP GF    +  LVC+LHKALYGLKQAPRAWF++L   LL+ GF  +K+D 
Sbjct: 1106 DLQEEVFMQQPQGFIDEKNPNLVCRLHKALYGLKQAPRAWFEKLHQALLSFGFVSAKSDQ 1165

Query: 1369 SLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEVSY 1428
            SL  R   S   Y+L+YVDDI+++GS ++ IT LI+ LN +FSLKDLG ++YFLGI+VS+
Sbjct: 1166 SLFLRFTPSHITYVLVYVDDILVIGSDTTTITSLIAQLNSEFSLKDLGEVHYFLGIQVSH 1225

Query: 1429 PKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVGAL 1488
              + GL LSQTKYI DLL K KM    P  TP+ +G  + A +G+   D+H YRS VGAL
Sbjct: 1226 -TNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRAGDGDPVDDLHGYRSTVGAL 1285

Query: 1489 QYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLYGY 1548
            QY TITRPE+++SVNKVCQFM +PT+ HW+AVKRILRYL+G+   GL L+K SNL L G+
Sbjct: 1286 QYVTITRPELSFSVNKVCQFMQNPTEEHWKAVKRILRYLQGTLQHGLHLKKSSNLDLIGF 1345

Query: 1549 ADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIWLQ 1608
             DADWASD DDR+STSG C+F G NL++W SKKQ  +SRSSTEAE+RSLA   AE+ WL+
Sbjct: 1346 CDADWASDLDDRRSTSGHCVFLGPNLISWQSKKQHTVSRSSTEAEYRSLAGLVAEITWLR 1405

Query: 1609 ALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELDIYFVRDLVLQKRLMIQHL 1645
            +LL+ELQ+P ++PP++WCDNL  V LSANPVLH+RTKH+ELD+YFV + V++K + ++H+
Sbjct: 1406 SLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVHEKVIRKEVEVRHV 1407

[Close]

BLAST of Sgr012076 vs. NCBI nr
Match: RVW64314.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 642/1421 (45.18%), Postives = 898/1421 (63.19%), Query Frame = 0


Query: 229  SHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSSTNDGSPSTVEEANP 288
            +H   I L  +NY++W+ Q+   +   G ED+I   +G        T+ G      E NP
Sbjct: 29   NHALPIKLDRNNYILWRTQMENVVFANGFEDHI---EGLKICPPQKTSSG------ETNP 88

Query: 289  AHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQM 348
              ++W R DR+I SW+ SS+T  ++  ++  ++S   W  LE ++  S+ A+ M  + + 
Sbjct: 89   DFVMWRRFDRMILSWIYSSLTPEIMGQIVGYQSSHAAWFALERIFSASSRARVMQLRLEF 148

Query: 349  QNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVITAKSR 408
            Q  +KG +T+ EY  K+K LAD+L AIGE V+ +D I+ +L GLG +Y++IV+ +TA+  
Sbjct: 149  QTTRKGSLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTARED 208

Query: 409  PLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTGSTNDQKNGSSYHNNG 468
             ++L  V+ +L  HE R     ++   SV   N+   + +       N++++      +G
Sbjct: 209  EMSLHSVHSILLTHEQR-----LSFQNSVAEDNVISANLATPQYQHFNNKRSSGQNRQSG 268

Query: 469  PNSFRGRGGRNFRGNRGWNGNKPQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQM 528
             N+ RG  G    G    + ++PQCQLCG+FGHT ++CY RFD NF G            
Sbjct: 269  FNTRRGTNG----GRSQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQG------------ 328

Query: 529  VQQPFQQSFSGNNSVGNQNYPMQSHPMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLA 588
                    ++ N      N P   + +QAMM +P+   D  W+ D+GA++H++     L+
Sbjct: 329  --------YNPNMDTVQTNKPNAKNQVQAMMASPSTISDEAWFFDTGATHHLSQSIDPLS 388

Query: 589  VSSPCTSDNRVHVGNGAGLSINHIGSSHLYSSNNQSFLLNNLLHVPHITKNLLSVSQFAK 648
               P   +++V VGNG  L I H G++  + S++++F L  +LHVP I  NL+SVSQF  
Sbjct: 389  DVQPYMGNDKVIVGNGKHLRILHTGTT-FFPSSSKTFQLRQVLHVPDIATNLISVSQFCA 448

Query: 649  DNDVFFEFHPLVCFVKDRQTGTILLQGLMHEGLYKFHLHPSKTQDLKQASLVP---PLSS 708
            DN+ FFEFHP   FVKD+ T  ILLQG +  GLY+F            A  VP      S
Sbjct: 449  DNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRF-----------PARFVPSPAAFVS 508

Query: 709  SSSTTAHVLACTSENTKANVIDLWHKRLGHAATPIVSQILKECNISFTNNSTSFCSACAI 768
            SS   +  L+ T+  T      LWH RLGH A  I+  IL  CNIS   +  + C AC  
Sbjct: 509  SSYDRSSNLSLTTTTT------LWHSRLGHPANNILKHILTSCNISHQCHKNNVCCACQF 568

Query: 769  GKSHALPFYPSQTIISTPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSK 828
             KSH LPF  S +  S PL+L+  DLWGPA   S  G RY+I FVD +SRF+W+Y L SK
Sbjct: 569  AKSHKLPFNVSVSRASHPLALLHADLWGPASIPSTTGARYFILFVDDFSRFSWIYPLHSK 628

Query: 829  SEAYSTFLTFKIHVEKLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGI 888
             +A S F+ FK  VE      I+ L++D GGEF+A + YL + GI  + +CPYT +QNG 
Sbjct: 629  DQALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGR 688

Query: 889  VERKHRHIVDMGLTLLSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPD 948
             ERK RHI++ GL LL+ ASLP +FW  AF  A++ INRLPT VL+  SP + LFGK P+
Sbjct: 689  AERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPN 748

Query: 949  YSFFKTFGCLCFPCLRPYNDHKLQFRSAPCVFLGYSNMHRGYKCLD-RTGRVFISRHVQF 1008
            Y  FK FGCLC+P +RPYN +KL +RS+ CVFLGYS+ H+GY CL+  TGR++++RHV F
Sbjct: 749  YHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVF 808

Query: 1009 NESSFPYLQSFLHSSSVKPLPIHSSINSFLPVLISSPTSSQFTSTSQPSTIVPTSQPLDP 1068
            +E+ FP+  +   SSSV  +P      +FLP   SSP  S   S + PST  P      P
Sbjct: 809  HETVFPFQSTPDQSSSVVTIP----TPAFLP--CSSPPVSSLRSHTTPSTSSP------P 868

Query: 1069 ATEVAIASPSASTSHSPLTNIDLSHIPEPNLTSTPIVTNTHPMVTRSKNGIVCPKVLLAE 1128
             T +    PS++ S   L  +  + I     TS P  TN HPMVTR+KNGI   KV  + 
Sbjct: 869  LTNM----PSSTISLPDLIQVPFADIS----TSEPHPTNQHPMVTRAKNGISKKKVYFSS 928

Query: 1129 YIEVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTIGCKWVFKIKRNTD 1188
            +I  EPTT  +A++  +W+ AM+ E++AL +N TW LVP  S    IGCKWV+K+K   D
Sbjct: 929  HIS-EPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPD 988

Query: 1189 GSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFL 1248
            G++ RYKARLVA+GF Q   +DY ETFSPV+K +TIR++L  AL+  W +HQLD+ NAFL
Sbjct: 989  GTVDRYKARLVAQGFTQTLGLDYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFL 1048

Query: 1249 HGVLTEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKA 1308
            HG L E VFM+QPPGF  S     VCKL+KALYGLKQAPRAW+++LS+ LL  GF+ S+A
Sbjct: 1049 HGDLEEHVFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRA 1108

Query: 1309 DTSLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEV 1368
            D+S+   H       +LIYVDDI++ GSSS++++  I+ LN  F+L+DLG +NYFLGIEV
Sbjct: 1109 DSSMFIHHSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEV 1168

Query: 1369 SYPKDGGLF-LSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIV 1428
               + G +F LSQ KY  DLL +  M ++ P TTP + G  +S  +GE FSD   YRS V
Sbjct: 1169 --VRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTV 1228

Query: 1429 GALQYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGL 1488
            GALQY T+TRP+I+++VNK CQFM +PT  HW AVKRILRYLKG+ + G+ +++ ++L +
Sbjct: 1229 GALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDI 1288

Query: 1489 YGYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELI 1548
            +GY DADWAS PDDR+ST G+ IF G NLV+W S KQ ++SRSS E+E+R+LA+ ++E+I
Sbjct: 1289 HGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMI 1348

Query: 1549 WLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELDIYFVRDLVLQKRLMI 1608
            W+Q +L EL + +S PP+LWCDN  A HL+ANPV H+RTKH+E+D++F+RD VL+K+L+I
Sbjct: 1349 WIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQLVI 1369

Query: 1609 QHLPAFAQLADIFTKPLSATSFLHIRSKLNVCDAYDIGLRG 1645
            Q+LP+  Q+ADIFTK +S++ FL  R+KL+V  +  + LRG
Sbjct: 1409 QYLPSAEQVADIFTKHISSSQFLSFRTKLSVVPS-PVSLRG 1369

[Close]

BLAST of Sgr012076 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 943.0 bits (2436), Expect = 4.7e-273
Identity = 592/1526 (38.79%), Postives = 830/1526 (54.39%), Query Frame = 0


Query: 213  EETNTQQSVTLGINPGSHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYL 272
            EE     +  L +N  + TK   LT +NYL+W  Q+     GY L  ++  D  T     
Sbjct: 6    EELVLNNTSILNVNMSNVTK---LTSTNYLMWSRQVHALFDGYELAGFL--DGSTTMPPA 65

Query: 273  SSTNDGSPSTVEEANPAHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEM 332
            +   D +P      NP +  W RQD+LI S +L +++  V   V    T+ +IW+TL ++
Sbjct: 66   TIGTDAAP----RVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKI 125

Query: 333  YVTSNLAKNMSYKNQMQNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGL 392
            Y   +       + Q++   KG  T+ +Y   +    D L  +G+ +   + +  +L  L
Sbjct: 126  YANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENL 185

Query: 393  GVEYDAIVSVITAKSRPLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGT 452
              EY  ++  I AK  P TL E++  L  HES+     +    S   + +T  + S + T
Sbjct: 186  PEEYKPVIDQIAAKDTPPTLTEIHERLLNHESK-----ILAVSSATVIPITANAVSHRNT 245

Query: 453  GSTNDQKNGS------SYHNNGPNSFRGRGGRNFRGNRGWNGNKP---QCQLCGRFGHTA 512
             +TN+  NG+      + +NN  +    +   NF  N   N +KP   +CQ+CG  GH+A
Sbjct: 246  TTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNN--NQSKPYLGKCQICGVQGHSA 305

Query: 513  LKCYQRFDPNFHGNNGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPMQSHPMQ--AMMVA 572
             +C Q            L H                 +SV +Q  P    P Q  A +  
Sbjct: 306  KRCSQ------------LQH---------------FLSSVNSQQPPSPFTPWQPRANLAL 365

Query: 573  PNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSINHIGSSHLYSSN 632
             +     NW  DSGA++H+T+DF NL++  P T  + V V +G+ + I+H GS+ L S+ 
Sbjct: 366  GSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSL-STK 425

Query: 633  NQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQTGTILLQGLMHEGL 692
            ++   L+N+L+VP+I KNL+SV +    N V  EF P    VKD  TG  LLQG   + L
Sbjct: 426  SRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDEL 485

Query: 693  YKFHLHPSKTQDLKQASLVPPLSSSSSTTAHVLACTSENTKANVIDLWHKRLGHAATPIV 752
            Y++ +  S+   L         +S SS   H                WH RLGH A  I+
Sbjct: 486  YEWPIASSQPVSL--------FASPSSKATH--------------SSWHARLGHPAPSIL 545

Query: 753  SQILKECNISFTNNSTSF--CSACAIGKSHALPFYPSQTIISTPLSLIETDLWGPAVKSS 812
            + ++   ++S  N S  F  CS C I KS+ +PF  S    + PL  I +D+W   + S 
Sbjct: 546  NSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSH 605

Query: 813  KNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVEKLLGHSIKMLQTDGGGEFR 872
             N +RYY+ FVD ++R+TW+Y L+ KS+   TF+TFK  +E      I    +D GGEF 
Sbjct: 606  DN-YRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV 665

Query: 873  ALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTLLSQASLPLEFWDDAFSAAV 932
            AL  Y    GI H  + P+T + NG+ ERKHRHIV+ GLTLLS AS+P  +W  AF+ AV
Sbjct: 666  ALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAV 725

Query: 933  YTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCLRPYNDHKLQFRSAPCVFLG 992
            Y INRLPT +L   SP +KLFG  P+Y   + FGC C+P LRPYN HKL  +S  CVFLG
Sbjct: 726  YLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLG 785

Query: 993  YSNMHRGYKCLD-RTGRVFISRHVQFNESSFPY---------LQSFLHSSSVKPLPIHSS 1052
            YS     Y CL  +T R++ISRHV+F+E+ FP+         +Q     SS    P H++
Sbjct: 786  YSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSP-HTT 845

Query: 1053 INSFLPVL-------------------------------ISSPTSSQFTSTSQPST---- 1112
            + +  PVL                               + S  SS F S+ +P+     
Sbjct: 846  LPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQN 905

Query: 1113 -IVPTSQPLDPATEV---------------------AIASP--SASTSHSPLTNID---- 1172
               PT+QP    T+                      ++++P  S+S+S SP T+      
Sbjct: 906  GPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSST 965

Query: 1173 -------LSHIPEP------NLTSTPIVTNTHPMVTRSKNGIV--CPKVLLAEYI--EVE 1232
                   L H P P      N    P+  NTH M TR+K GI+   PK  LA  +  E E
Sbjct: 966  SPTPPSILIHPPPPLAQIVNNNNQAPL--NTHSMGTRAKAGIIKPNPKYSLAVSLAAESE 1025

Query: 1233 PTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTI-GCKWVFKIKRNTDGSIA 1292
            P T  +AL+   W  AM  E  A + N TW LVP   +H TI GC+W+F  K N+DGS+ 
Sbjct: 1026 PRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLN 1085

Query: 1293 RYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFLHGVL 1352
            RYKARLVAKG++Q   +DY ETFSPVIK T+IR++L  A+   W I QLD+NNAFL G L
Sbjct: 1086 RYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTL 1145

Query: 1353 TEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKADTSL 1412
            T+DV+M QPPGF        VCKL KALYGLKQAPRAW+  L ++LL +GF  S +DTSL
Sbjct: 1146 TDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSL 1205

Query: 1413 LFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEVSYPK 1472
                 G S  Y+L+YVDDI+I G+  + +   +  L+ +FS+KD   L+YFLGIE     
Sbjct: 1206 FVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVP 1265

Query: 1473 DGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVGALQY 1532
              GL LSQ +YI DLL +  M  A P+TTPM     +S ++G K +D   YR IVG+LQY
Sbjct: 1266 T-GLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQY 1325

Query: 1533 ATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLYGYAD 1592
               TRP+I+Y+VN++ QFMH PT+ H QA+KRILRYL G+   G+ L+K + L L+ Y+D
Sbjct: 1326 LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSD 1385

Query: 1593 ADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIWLQAL 1635
            ADWA D DD  ST+G+ ++ G + ++W SKKQ  + RSSTEAE+RS+ANTS+E+ W+ +L
Sbjct: 1386 ADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSL 1445

[Close]

BLAST of Sgr012076 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 4.5e-260
Identity = 574/1526 (37.61%), Postives = 806/1526 (52.82%), Query Frame = 0


Query: 208  KEQVMEETNTQQSVTLGINPGSHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGT 267
            +E V+  TN      L +N  + TK   LT +NYL+W  Q+     GY L  ++  D  T
Sbjct: 6    EEIVLVNTN-----ILNVNMSNVTK---LTSTNYLMWSRQVHALFDGYELAGFL--DGST 65

Query: 268  PSLYLSSTNDGSPSTVEEANPAHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWK 327
            P    +   D  P      NP +  W RQD+LI S +L +++  V   V    T+ +IW+
Sbjct: 66   PMPPATIGTDAVP----RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWE 125

Query: 328  TLEEMYVTSNLAKNMSYKNQMQNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIY 387
            TL ++Y       N SY         G +T   + ++     D L  +G+ +   + +  
Sbjct: 126  TLRKIYA------NPSY---------GHVTQLRFITRF----DQLALLGKPMDHDEQVER 185

Query: 388  ILSGLGVEYDAIVSVITAKSRPLTLQEVYGLLYAHESR----SERSTVNIDGSVPTVNLT 447
            +L  L  +Y  ++  I AK  P +L E++  L   ES+    +    V I  +V T   T
Sbjct: 186  VLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNT 245

Query: 448  QQSSSKKGTGSTNDQKNGSSYHNNGPNSFRGRGGRNFRGNRGWNGNKPQCQLCGRFGHTA 507
              + ++   G   +  N    +NN  NS++     +   NR       +CQ+C   GH+A
Sbjct: 246  NTNRNQNNRGDNRNYNN----NNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSA 305

Query: 508  LKCYQRFDPNFHGNNGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPMQSHPMQAMMVAPN 567
             +C     P  H      N Q +     P+Q                   P   + V   
Sbjct: 306  KRC-----PQLHQFQSTTNQQQSTSPFTPWQ-------------------PRANLAVNSP 365

Query: 568  INLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSINHIGSSHLYSSNNQ 627
             N + NW  DSGA++H+T+DF NL+   P T  + V + +G+ + I H GS+ L +S ++
Sbjct: 366  YNAN-NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTS-SR 425

Query: 628  SFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQTGTILLQGLMHEGLYK 687
            S  LN +L+VP+I KNL+SV +    N V  EF P    VKD  TG  LLQG   + LY+
Sbjct: 426  SLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 485

Query: 688  FHLHPSKTQDLKQASLVPPLSSSSSTTAHVLACTSENTKANVIDLWHKRLGHAATPIVSQ 747
            +                 P++SS + +     C+     +     WH RLGH +  I++ 
Sbjct: 486  W-----------------PIASSQAVSMFASPCSKATHSS-----WHSRLGHPSLAILNS 545

Query: 748  ILKECNISFTNNSTSF--CSACAIGKSHALPFYPSQTIISTPLSLIETDLWGPAVKSSKN 807
            ++   ++   N S     CS C I KSH +PF  S    S PL  I +D+W   + S  N
Sbjct: 546  VISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDN 605

Query: 808  GFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVEKLLGHSIKMLQTDGGGEFRAL 867
             +RYY+ FVD ++R+TW+Y L+ KS+   TF+ FK  VE      I  L +D GGEF  L
Sbjct: 606  -YRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVL 665

Query: 868  APYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTLLSQASLPLEFWDDAFSAAVYT 927
              YL   GI H  + P+T + NG+ ERKHRHIV+MGLTLLS AS+P  +W  AFS AVY 
Sbjct: 666  RDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYL 725

Query: 928  INRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCLRPYNDHKLQFRSAPCVFLGYS 987
            INRLPT +L   SP +KLFG+ P+Y   K FGC C+P LRPYN HKL+ +S  C F+GYS
Sbjct: 726  INRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYS 785

Query: 988  NMHRGYKCLD-RTGRVFISRHVQFNESSFPYLQSFL--------HSSSVKPLPIHSSINS 1047
                 Y CL   TGR++ SRHVQF+E  FP+  +           S S    P H+++ +
Sbjct: 786  LTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPT 845

Query: 1048 FLPVL-------------------------------------ISSPTSSQFTSTSQPSTI 1107
               VL                                     ISSP+SS+ T+ S     
Sbjct: 846  TPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGP- 905

Query: 1108 VPTSQPLDPATEVAIA-----------SPSASTSHSPLTNIDLS--HIPEPNL------- 1167
             PT+QP       + +           SP++   +SPL    +S  HIP P+        
Sbjct: 906  QPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNS 965

Query: 1168 -----TSTPIV-----------------TNTHPMVTRSKNGIVCP--KVLLAEYIEV--E 1227
                 TSTP +                  NTH M TR+K+GI  P  K   A  +    E
Sbjct: 966  PSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSE 1025

Query: 1228 PTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTI-GCKWVFKIKRNTDGSIA 1287
            P T  +A++   W QAM  E  A + N TW LVP      TI GC+W+F  K N+DGS+ 
Sbjct: 1026 PRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLN 1085

Query: 1288 RYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFLHGVL 1347
            RYKARLVAKG++Q   +DY ETFSPVIK T+IR++L  A+   W I QLD+NNAFL G L
Sbjct: 1086 RYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTL 1145

Query: 1348 TEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKADTSL 1407
            T++V+M QPPGF        VC+L KA+YGLKQAPRAW+  L ++LL +GF  S +DTSL
Sbjct: 1146 TDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSL 1205

Query: 1408 LFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEVSYPK 1467
                 G S  Y+L+YVDDI+I G+ +  +   +  L+ +FS+K+   L+YFLGIE     
Sbjct: 1206 FVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVP 1265

Query: 1468 DGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVGALQY 1527
              GL LSQ +Y  DLL +  M  A P+ TPM +   ++  +G K  D   YR IVG+LQY
Sbjct: 1266 Q-GLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQY 1325

Query: 1528 ATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLYGYAD 1587
               TRP+++Y+VN++ Q+MH PT  HW A+KR+LRYL G+   G+ L+K + L L+ Y+D
Sbjct: 1326 LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSD 1385

Query: 1588 ADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIWLQAL 1635
            ADWA D DD  ST+G+ ++ G + ++W SKKQ  + RSSTEAE+RS+ANTS+EL W+ +L
Sbjct: 1386 ADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSL 1443

[Close]

BLAST of Sgr012076 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.5e-157
Identity = 411/1363 (30.15%), Postives = 649/1363 (47.62%), Query Frame = 0


Query: 293  WTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQMQNLK 352
            W   D   +S +   +++ V+ +++D +T+R IW  LE +Y++  L   +  K Q+  L 
Sbjct: 52   WADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALH 111

Query: 353  KG-GMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVITAKSRPLT 412
               G     + +    L   L  +G K+  +D  I +L+ L   YD + + I      + 
Sbjct: 112  MSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIE 171

Query: 413  LQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTGSTNDQKNGSSYHNNGPNS 472
            L++V   L  +E                    ++    +G     + + G SY  +  N 
Sbjct: 172  LKDVTSALLLNEK------------------MRKKPENQGQALITEGR-GRSYQRSSNN- 231

Query: 473  FRGRGGRNFRGNRGWNGNKPQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQMVQQ 532
              GR G   +           C  C + GH     ++R  PN     G  + Q N     
Sbjct: 232  -YGRSGARGKSKNRSKSRVRNCYNCNQPGH-----FKRDCPNPRKGKGETSGQKNDDNTA 291

Query: 533  PFQQSFSGNNSVGNQNYPMQSHPMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSS 592
               Q+        N N  +  +  +  M       ++ W  D+ AS+H T    +L    
Sbjct: 292  AMVQN--------NDNVVLFINEEEECMHLS--GPESEWVVDTAASHHAT-PVRDLFCRY 351

Query: 593  PCTSDNRVHVGNGAGLSINHIGSSHLYSSNNQSFLLNNLLHVPHITKNLLSVSQFAKDND 652
                   V +GN +   I  IG   + ++   + +L ++ HVP +  NL  +S  A D D
Sbjct: 352  VAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNL--ISGIALDRD 411

Query: 653  VFFEFHPLVCFVKDR----QTGTILLQGLMHEGLYKFHLHPSKTQDLKQASLVPPLSSSS 712
             +  +     F   +    +   ++ +G+    LY+                        
Sbjct: 412  GYESY-----FANQKWRLTKGSLVIAKGVARGTLYR------------------------ 471

Query: 713  STTAHVLACTSENTKAN---VIDLWHKRLGHAATPIVSQILKECNISFTNNST-SFCSAC 772
             T A +  C  E   A     +DLWHKR+GH +   +  + K+  IS+   +T   C  C
Sbjct: 472  -TNAEI--CQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYC 531

Query: 773  AIGKSHALPFYPSQTIISTPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQ 832
              GK H + F  S       L L+ +D+ GP    S  G +Y+++F+D  SR  WVY L+
Sbjct: 532  LFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILK 591

Query: 833  SKSEAYSTFLTFKIHVEKLLGHSIKMLQTDGGGEF--RALAPYLKSQGIIHRVTCPYTSQ 892
            +K + +  F  F   VE+  G  +K L++D GGE+  R    Y  S GI H  T P T Q
Sbjct: 592  TKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQ 651

Query: 893  QNGIVERKHRHIVDMGLTLLSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFG 952
             NG+ ER +R IV+   ++L  A LP  FW +A   A Y INR P+  L+   P      
Sbjct: 652  HNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTN 711

Query: 953  KKPDYSFFKTFGCLCFPCLRPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRT-GRVFISR 1012
            K+  YS  K FGC  F  +      KL  +S PC+F+GY +   GY+  D    +V  SR
Sbjct: 712  KEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSR 771

Query: 1013 HVQFNESSFPYLQSFLHSSSVKPLPIHSSINSFLPVLISSPTSSQFTST------SQPST 1072
             V F ES          S  VK   I + +   +P   ++PTS++ T+        QP  
Sbjct: 772  DVVFRESEVRTAADM--SEKVKNGIIPNFVT--IPSTSNNPTSAESTTDEVSEQGEQPGE 831

Query: 1073 IVPTSQPLDPATEVAIASPSASTSHSPLTNIDLSHIPEPNLTSTPIVTNTHPMVTRSKNG 1132
            ++   + LD   E           H PL   +   +      ST                
Sbjct: 832  VIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEY-------------- 891

Query: 1133 IVCPKVLLAEYIEVEPTTVKEALRCP---HWLQAMKDEYAALMKNGTWSLVPHSSTHKTI 1192
                 VL+++  + EP ++KE L  P     ++AM++E  +L KNGT+ LV      + +
Sbjct: 892  -----VLISD--DREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPL 951

Query: 1193 GCKWVFKIKRNTDGSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANG 1252
             CKWVFK+K++ D  + RYKARLV KGF Q   ID+ E FSPV+K T+IR +L+ A +  
Sbjct: 952  KCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLD 1011

Query: 1253 WQIHQLDINNAFLHGVLTEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLS 1312
             ++ QLD+  AFLHG L E+++MEQP GF ++G   +VCKL+K+LYGLKQAPR W+ +  
Sbjct: 1012 LEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFD 1071

Query: 1313 SFLLALGFKCSKADTSLLFRHVGSSKCYI-LIYVDDIVIMGSSSSEITQLISLLNHQFSL 1372
            SF+ +  +  + +D  + F+    +   I L+YVDD++I+G     I +L   L+  F +
Sbjct: 1072 SFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDM 1131

Query: 1373 KDLGRLNYFLGIEVSYPKDG-GLFLSQTKYITDLLHKAKMFEANPITTPM-----VSGSV 1432
            KDLG     LG+++   +    L+LSQ KYI  +L +  M  A P++TP+     +S  +
Sbjct: 1132 KDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKM 1191

Query: 1433 VSAFNGEKFSDVHF-YRSIVGALQYATI-TRPEIAYSVNKVCQFMHSPTQVHWQAVKRIL 1492
                  EK +     Y S VG+L YA + TRP+IA++V  V +F+ +P + HW+AVK IL
Sbjct: 1192 CPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWIL 1251

Query: 1493 RYLKGSFTSGLLLRKPSNLGLYGYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSI 1552
            RYL+G+ T   L    S+  L GY DAD A D D+RKS++G+   F G  ++W SK Q  
Sbjct: 1252 RYLRGT-TGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1311

Query: 1553 ISRSSTEAEFRSLANTSAELIWLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRT 1612
            ++ S+TEAE+ +   T  E+IWL+  L EL +   +  +++CD+  A+ LS N + H+RT
Sbjct: 1312 VALSTTEAEYIAATETGKEMIWLKRFLQELGL-HQKEYVVYCDSQSAIDLSKNSMYHART 1316

Query: 1613 KHVELDIYFVRDLVLQKRLMIQHLPAFAQLADIFTKPLSATSF 1626
            KH+++  +++R++V  + L +  +      AD+ TK +    F
Sbjct: 1372 KHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316

[Close]

BLAST of Sgr012076 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 441.4 bits (1134), Expect = 4.4e-122
Identity = 399/1491 (26.76%), Postives = 646/1491 (43.33%), Query Frame = 0


Query: 241  YLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSSTNDGSPSTVEEANPAHLLWTRQDRLI 300
            Y +WK +I   L     +D +   DG             P+ V+++      W + +R  
Sbjct: 16   YAIWKFRIRALL---AEQDVLKVVDGL-----------MPNEVDDS------WKKAERCA 75

Query: 301  SSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQMQNLK-KGGMTLK 360
             S ++  +++  L       T+R+I + L+ +Y   +LA  ++ + ++ +LK    M+L 
Sbjct: 76   KSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLL 135

Query: 361  EYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVI-TAKSRPLTLQEVYGL 420
             +F    +L   L A G K+   D I ++L  L   YD I++ I T     LTL  V   
Sbjct: 136  SHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNR 195

Query: 421  LYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTGSTNDQKNGSSYHNNGPNSFRGRGGR 480
            L             +D  +   N    +S K      ++  N ++Y NN   +   +  +
Sbjct: 196  L-------------LDQEIKIKNDHNDTSKKVMNAIVHN--NNNTYKNNLFKNRVTKPKK 255

Query: 481  NFRGNRGWNGNKPQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQMVQQPFQQSFS 540
             F+GN  +   K +C  CGR GH    C+     ++       N +  + VQ        
Sbjct: 256  IFKGNSKY---KVKCHHCGREGHIKKDCF-----HYKRILNNKNKENEKQVQ-------- 315

Query: 541  GNNSVGNQNYPMQSHPMQAMMVAPN---INLDTNWYPDSGASNHVTNDFGNLAVSSPCTS 600
                         SH +  M+   N   +  +  +  DSGAS+H+ ND      S     
Sbjct: 316  ----------TATSHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVP 375

Query: 601  DNRVHVGNGAGLSINHIGSSHLYSSNNQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFE 660
              ++ V    G  I       +   N+    L ++L       NL+SV +  ++  +  E
Sbjct: 376  PLKIAVAK-QGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRL-QEAGMSIE 435

Query: 661  FHPLVCFVKDRQTGTILLQGLMHEGLYKFHLHPSKTQDLKQASLVPPLSSSSSTTAHVLA 720
            F        D+   TI   GLM              ++    + VP ++           
Sbjct: 436  F--------DKSGVTISKNGLM------------VVKNSGMLNNVPVIN---------FQ 495

Query: 721  CTSENTK-ANVIDLWHKRLGHAATPIVSQILKE---CNISFTNN---STSFCSACAIGKS 780
              S N K  N   LWH+R GH +   + +I ++    + S  NN   S   C  C  GK 
Sbjct: 496  AYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQ 555

Query: 781  HALPF--YPSQTIISTPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKS 840
              LPF     +T I  PL ++ +D+ GP    + +   Y++ FVD ++ +   Y ++ KS
Sbjct: 556  ARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKS 615

Query: 841  EAYSTFLTFKIHVEKLLGHSIKMLQTDGGGEF--RALAPYLKSQGIIHRVTCPYTSQQNG 900
            + +S F  F    E      +  L  D G E+    +  +   +GI + +T P+T Q NG
Sbjct: 616  DVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNG 675

Query: 901  IVERKHRHIVDMGLTLLSQASLPLEFWDDAFSAAVYTINRLPTTVL--SGISPVEKLFGK 960
            + ER  R I +   T++S A L   FW +A   A Y INR+P+  L  S  +P E    K
Sbjct: 676  VSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNK 735

Query: 961  KPDYSFFKTFGCLCFPCLRPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFI---- 1020
            KP     + FG   +  ++     K   +S   +F+GY     G+K  D     FI    
Sbjct: 736  KPYLKHLRVFGATVYVHIK-NKQGKFDDKSFKSIFVGYE--PNGFKLWDAVNEKFIVARD 795

Query: 1021 ----------SRHVQFN-----------------------ESSFP----------YLQSF 1080
                      SR V+F                        ++ FP          +L+  
Sbjct: 796  VVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDS 855

Query: 1081 LHSSSVK-PLPIHSSINSFLPVLISSPTSSQFTSTSQPSTIV----PTSQPLDPATEVAI 1140
              S +   P      I +  P       + QF   S+ S          +  D     + 
Sbjct: 856  KESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESK 915

Query: 1141 ASPSASTSHSPLTNIDLSHIPEPNLTSTPIV---------TNTHPMVTRSKNGIVCPKVL 1200
             S + + S    T   L  I   N T    +           T P ++ ++      KV+
Sbjct: 916  GSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVV 975

Query: 1201 L----------AEYIEVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTI 1260
            L            + E++    K +     W +A+  E  A   N TW++         +
Sbjct: 976  LNAHTIFNDVPNSFDEIQYRDDKSS-----WEEAINTELNAHKINNTWTITKRPENKNIV 1035

Query: 1261 GCKWVFKIKRNTDGSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANG 1320
              +WVF +K N  G+  RYKARLVA+GF Q   IDY ETF+PV + ++ R +L+  +   
Sbjct: 1036 DSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYN 1095

Query: 1321 WQIHQLDINNAFLHGVLTEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLS 1380
             ++HQ+D+  AFL+G L E+++M  P G  IS +S  VCKL+KA+YGLKQA R WF+   
Sbjct: 1096 LKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFE 1155

Query: 1381 SFLLALGFKCSKADTSLLFRHVG--SSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFS 1440
              L    F  S  D  +     G  +   Y+L+YVDD+VI     + +      L  +F 
Sbjct: 1156 QALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFR 1215

Query: 1441 LKDLGRLNYFLGIEVSYPKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFN 1500
            + DL  + +F+GI +   +D  ++LSQ+ Y+  +L K  M   N ++TP+ S       N
Sbjct: 1216 MTDLNEIKHFIGIRIEMQED-KIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLN 1275

Query: 1501 GEKFSDVHFYRSIVGALQYATI-TRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGS 1560
             ++  +    RS++G L Y  + TRP++  +VN + ++        WQ +KR+LRYLKG+
Sbjct: 1276 SDEDCNTP-CRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGT 1335

Query: 1561 FTSGLLLRKPSNLG----LYGYADADWASDPDDRKSTSGFCI-FFGGNLVTWGSKKQSII 1620
                L+ +K  NL     + GY D+DWA    DRKST+G+    F  NL+ W +K+Q+ +
Sbjct: 1336 IDMKLIFKK--NLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSV 1395

Query: 1621 SRSSTEAEFRSLANTSAELIWLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTK 1635
            + SSTEAE+ +L     E +WL+ LL  + I    P  ++ DN G + ++ NP  H R K
Sbjct: 1396 AASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAK 1400

[Close]

BLAST of Sgr012076 vs. ExPASy Swiss-Prot
Match: Q39547 (Cucumisin OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.7e-60
Identity = 125/218 (57.34%), Postives = 149/218 (68.35%), Query Frame = 0


Query: 16  HIAAAVPPGDVRSPRDTNGHGTHTAS------------------TARGGVPSARIAVYKI 75
           HI   + PGDV  PRDTNGHGTHTAS                  TARGGVP ARIA YK+
Sbjct: 185 HIGRPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKV 244

Query: 76  CWSDGCFDADILAAFDDIIADSVDIISLSVGPKKPKPYLEDSIAIGTFHAMKHGILTSNS 135
           CW+DGC D DILAA+DD IAD VDIISLSVG   P+ Y  D+IAIG+FHA++ GILTSNS
Sbjct: 245 CWNDGCSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNS 304

Query: 136 AGNNGPKYYTTANGAPWSLSVAASSIDRKFKAQVQLGNGNIYQGVAINTFDLMGRQYPLI 195
           AGN GP ++TTA+ +PW LSVAAS++DRKF  QVQ+GNG  +QGV+INTFD   + YPL+
Sbjct: 305 AGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFD--NQYYPLV 364

Query: 196 YAGDAPNVDGGFSKYTSR--ANRLATPKILQIKEQVME 214
              D PN   GF K TSR   ++   P +L+ K  V E
Sbjct: 365 SGRDIPNT--GFDKSTSRFCTDKSVNPNLLKGKIVVCE 398

[Close]

BLAST of Sgr012076 vs. ExPASy TrEMBL
Match: A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)

HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 711/1486 (47.85%), Postives = 934/1486 (62.85%), Query Frame = 0


Query: 215  TNTQQSVTLGINPGSHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSS 274
            T T +S+ + I+P S    + L + N+L+WK QI   ++GYGLE ++   +  P   ++ 
Sbjct: 133  TTTDESLRMVISPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVT- 192

Query: 275  TNDGSPSTVEEANPAHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYV 334
                    V   NP    + RQD L+ SWLLSS+    L  V+ C ++ E+W T+ + + 
Sbjct: 193  ----DKIGVLVPNPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFN 252

Query: 335  TSNLAKNMSYKNQMQNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGV 394
            + + AK M YK+QMQ LKK G+T+++Y +KMK   D L   G K+S  DHI+ I+ GLG 
Sbjct: 253  SQSSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGD 312

Query: 395  EYDAIVSVITAKSRPLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTGS 454
            EY+++++VI++K    +LQ V   L AHE R      + D S   VN T Q S++  + S
Sbjct: 313  EYESVIAVISSKKSSPSLQYVTSTLIAHEGRIAHKISSNDLS---VNYTSQYSNRGPSSS 372

Query: 455  TNDQ------------------KNGSSYHNNGPNSFRGRGGRNFRGNRGWNGNKPQCQLC 514
             N                      GS  HN G    RGRG       R   G KPQCQLC
Sbjct: 373  WNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRG----RGRG-------RAQGGIKPQCQLC 432

Query: 515  GRFGHTALKCYQRFDPNFHGN---NGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPMQSH 574
             +FGHT  +C+ R+DPNFHGN   NG          +     S S   +V    Y  Q +
Sbjct: 433  NKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLTEYDAQEN 492

Query: 575  ----PMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSI 634
                 M+AM+  P    +  W+PDSGA+NHVT+D GNL   +    ++++H+GNG GL I
Sbjct: 493  QDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKI 552

Query: 635  NHIGSSHLYSSN--NQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQ 694
            +HIG S   SS+  N+   L N+L VP I KNLLSVSQFA+DN+V+FEFHP VCFVKD+ 
Sbjct: 553  SHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKS 612

Query: 695  TGTILLQGLMHEGLYKFHLHP---SKTQDLKQASLVPPLSSSSSTTAHVLAC---TSENT 754
              ++LLQG +H+GLY+F+L      K   L  ++    L+  +++  H          N+
Sbjct: 613  NHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNS 672

Query: 755  KANVIDLWHKRLGHAATPIVSQILKECNISF-TNNSTSFCSACAIGKSHALPFYPSQTII 814
              +V DLWHKRLGH A+ IV+Q+L +  I F T + +S CSAC +GKSH LPF  SQT+ 
Sbjct: 673  SFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKSHNLPFPISQTVY 732

Query: 815  STPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVE 874
            + PL L+ +DLWGPA  +S  GF YY+SFVD YSR+TWVYFL++KS+    FL FK   E
Sbjct: 733  TKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQTREAFLMFKAQAE 792

Query: 875  KLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTL 934
               G  +K  QTD GGEFR+L  Y +  GIIHR++CP+TS+QNGI+ERKHRHIV++GLTL
Sbjct: 793  LQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTL 852

Query: 935  LSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCL 994
            L+QASLPL++W DAFS AV+ INRLPT VL    P E LF  KP+YS  K FGCLCFP L
Sbjct: 853  LAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHL 912

Query: 995  RPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSF----- 1054
            RPYN HKL FRS+PC FLGYS+ H+GYKCL++ GR+FISR V F+E+ FP+         
Sbjct: 913  RPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQKPVQ 972

Query: 1055 LHSSSVKPLPIHSSINSFLPVLISSPTSSQFTSTSQP---------STIVPTSQPL---D 1114
            + S S   LP    + +  P+ + SP+ S  TS++Q          S I    Q L   D
Sbjct: 973  IVSHSTVGLPCIPLVKNLEPLSV-SPSLSLPTSSAQSSHQLDENLGSDIRSVQQDLSNTD 1032

Query: 1115 PATEVAIASPSASTSHS----------PL-TNIDLSHIPEPNLTSTPIV--TNTHPMVTR 1174
             ++ V I + SAS   S          PL TN D    P  ++ + P+      H MVTR
Sbjct: 1033 SSSTVPILNESASIPSSSNLYALPGTIPLSTNSD---EPNESINTRPVTFPQQPHHMVTR 1092

Query: 1175 SKNGIVCPKVLLAEYIEVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKT 1234
            SKNGI  PKV   +    EP T +EA+  P W +AM +E+ ALMKN TWSLV   +   +
Sbjct: 1093 SKNGIFKPKVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTS 1152

Query: 1235 IGCKWVFKIKRNTDGSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALAN 1294
            +GC+WVFK+KRN DGS++RYKARLVAKG+ Q+   D+ ETFSPV+KPTTIRV+L  A++ 
Sbjct: 1153 VGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQ 1212

Query: 1295 GWQIHQLDINNAFLHGVLTEDVFMEQPPGF--SISGSSPLVCKLHKALYGLKQAPRAWFD 1354
             W I QLD+NNAFL+G L E+V+M+QPPGF    +    LVCKLHKALYGLKQAPRAWFD
Sbjct: 1213 SWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFD 1272

Query: 1355 RLSSFLLALGFKCSKADTSLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQF 1414
            +L   L   GF  +K+D SL  R    S  ++L+YVDDIV+ GSSS EI +LIS L   F
Sbjct: 1273 KLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLF 1332

Query: 1415 SLKDLGRLNYFLGIEVSYPKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAF 1474
            SLKDLG L+YFLGIE                  DLL K KM  A  + TPM+SG  +SA 
Sbjct: 1333 SLKDLGELSYFLGIE------------------DLLKKTKMDGAKSLPTPMLSGLKLSAG 1392

Query: 1475 NGEKFSDVHFYRSIVGALQYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGS 1534
             G+   +V  YRS+VGALQY TITRPEIA+SVNKVCQFM  P   HW+AVKRILRYL G+
Sbjct: 1393 MGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGT 1452

Query: 1535 FTSGLLLRKPSNLGLYGYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSST 1594
               G++L+    + L G+ DADW SD DDR+STSG C+F G +LV+W SKKQ   SRSST
Sbjct: 1453 TDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSST 1512

Query: 1595 EAEFRSLANTSAELIWLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELD 1635
            EAE+RSLA+ ++E++WLQ+LL+ELQ   +  P++WCDN+  V LSANPVLHSRTKH+ELD
Sbjct: 1513 EAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELD 1572

[Close]

BLAST of Sgr012076 vs. ExPASy TrEMBL
Match: A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1)

HSP 1 Score: 1266.1 bits (3275), Expect = 0.0e+00
Identity = 709/1486 (47.71%), Postives = 925/1486 (62.25%), Query Frame = 0


Query: 215  TNTQQSVTLGINPGSHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSS 274
            T T +S+ + I+P S    + L + N+L+WK QI   ++GYGLE ++   +  P   ++ 
Sbjct: 26   TTTDESLRMVISPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVT- 85

Query: 275  TNDGSPSTVEEANPAHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYV 334
                    V   NP    + RQD L+ SWLLSS+    L  V+ C ++ E          
Sbjct: 86   ----DKIGVLVPNPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFE---------- 145

Query: 335  TSNLAKNMSYKNQMQNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGV 394
                                G+T+++Y +KMK   D L   G K+S  DHI+ I+ GLG 
Sbjct: 146  -------------------DGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGD 205

Query: 395  EYDAIVSVITAKSRPLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTGS 454
            EY+++++VI++K    +LQ V   L AHE R      + D S   VN T Q S++  + S
Sbjct: 206  EYESVIAVISSKKSSPSLQYVTSTLIAHEGRIAHKISSNDLS---VNYTSQYSNRGPSSS 265

Query: 455  TNDQ------------------KNGSSYHNNGPNSFRGRGGRNFRGNRGWNGNKPQCQLC 514
             N                      GS  HN G    RGRG       R   G KPQCQLC
Sbjct: 266  WNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRG----RGRG-------RAQGGIKPQCQLC 325

Query: 515  GRFGHTALKCYQRFDPNFHGN---NGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPMQSH 574
             +FGHT  +C+ R+DPNFHGN   NG          +     S S   +V    Y  Q +
Sbjct: 326  NKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLTEYDAQEN 385

Query: 575  ----PMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSI 634
                 M+AM+  P    +  W+PDSGA+NHVT+D GNL   +    ++++H+GNG GL I
Sbjct: 386  QDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKI 445

Query: 635  NHIGSSHLYSSN--NQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQ 694
            +HIG S   SS+  N+   L N+L VP I KNLLSVSQFA+DN+V+FEFHP VCFVKD+ 
Sbjct: 446  SHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKS 505

Query: 695  TGTILLQGLMHEGLYKFHLHP---SKTQDLKQASLVPPLSSSSSTTAHVLAC---TSENT 754
              ++LLQG +H+GLY+F+L      K   L  ++    L+  +++  H          N+
Sbjct: 506  NHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNS 565

Query: 755  KANVIDLWHKRLGHAATPIVSQILKECNISF-TNNSTSFCSACAIGKSHALPFYPSQTII 814
              +V DLWHKRLGH A+ IV+Q+L +  I F T + +S CSAC +GKSH LPF  SQT+ 
Sbjct: 566  SFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKSHNLPFPISQTVY 625

Query: 815  STPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVE 874
            + PL L+ +DLWGPA  +S  GF YY+SFVD YSR+TWVYFL++KS+    FL FK   E
Sbjct: 626  TKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQTREAFLMFKAQAE 685

Query: 875  KLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTL 934
               G  +K  QTD GGEFR+L  Y +  GIIHR++CP+TS+QNGI+ERKHRHIV++GLTL
Sbjct: 686  LQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTL 745

Query: 935  LSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCL 994
            L+QASLPL++W DAFS AV+ INRLPT VL    P E LF  KP+YS  K FGCLCFP L
Sbjct: 746  LAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHL 805

Query: 995  RPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSF----- 1054
            RPYN HKL FRS+PC FLGYS+ H+GYKCL++ GR+FISR V F+E+ FP+         
Sbjct: 806  RPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQKPVQ 865

Query: 1055 LHSSSVKPLPIHSSINSFLPVLISSPTSSQFTSTSQP---------STIVPTSQPL---D 1114
            + S S   LP    + +  P+ + SP+ S  TS++Q          S I    Q L   D
Sbjct: 866  IVSHSTVGLPCIPLVKNLEPLSV-SPSLSLPTSSAQSSHQLDENLGSDIRSVQQDLSNTD 925

Query: 1115 PATEVAIASPSASTSHS----------PL-TNIDLSHIPEPNLTSTPIV--TNTHPMVTR 1174
             ++ V I + SAS   S          PL TN D    P  ++ + P+      H MVTR
Sbjct: 926  SSSTVPILNESASIPSSSNLYALPGTIPLSTNSD---EPNESINTRPVTFPQQPHHMVTR 985

Query: 1175 SKNGIVCPKVLLAEYIEVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKT 1234
            SKNGI  PKV   +    EP T +EA+  P W +AM +E+ ALMKN TWSLV   +   +
Sbjct: 986  SKNGIFKPKVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTS 1045

Query: 1235 IGCKWVFKIKRNTDGSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALAN 1294
            +GC+WVFK+KRN DGS++RYKARLVAKG+ Q+   D+ ETFSPV+KPTTIRV+L  A++ 
Sbjct: 1046 VGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQ 1105

Query: 1295 GWQIHQLDINNAFLHGVLTEDVFMEQPPGF--SISGSSPLVCKLHKALYGLKQAPRAWFD 1354
             W I QLD+NNAFL+G L E+V+M+QPPGF    +    LVCKLHKALYGLKQAPRAWFD
Sbjct: 1106 SWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFD 1165

Query: 1355 RLSSFLLALGFKCSKADTSLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQF 1414
            +L   L   GF  +K+D SL  R    S  ++L+YVDDIV+ GSSS EI +LIS L   F
Sbjct: 1166 KLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLF 1225

Query: 1415 SLKDLGRLNYFLGIEVSYPKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAF 1474
            SLKDLG L+YFLGIEV    DGGL LSQ KYI DLL K KM  A  + TPM+SG  +SA 
Sbjct: 1226 SLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAG 1285

Query: 1475 NGEKFSDVHFYRSIVGALQYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGS 1534
             G+   +V  YRS+VGALQY TITRPEIA+SVNKVCQFM  P   HW+AVKRILRYL G+
Sbjct: 1286 MGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGT 1345

Query: 1535 FTSGLLLRKPSNLGLYGYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSST 1594
               G++L+    + L G+ DADW SD DDR+STSG C+F G +LV+W SKKQ   SRSST
Sbjct: 1346 TDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSST 1405

Query: 1595 EAEFRSLANTSAELIWLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELD 1635
            EAE+RSLA+ ++E++WLQ+LL+ELQ   +  P++WCDN+  V LSANPVLHSRTKH+ELD
Sbjct: 1406 EAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELD 1459

[Close]

BLAST of Sgr012076 vs. ExPASy TrEMBL
Match: A5BFT3 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_017741 PE=4 SV=1)

HSP 1 Score: 1237.2 bits (3200), Expect = 0.0e+00
Identity = 687/1473 (46.64%), Postives = 920/1473 (62.46%), Query Frame = 0


Query: 229  SHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSSTNDGSPSTVEEANP 288
            +H+  + L   N+L+WK QI+  ++GYGL+ ++  DD     +       SP  + +   
Sbjct: 28   NHSLSVKLDNKNFLIWKQQIVSAIRGYGLQKFVFSDDEVQFNF-------SPEKMRDL-- 87

Query: 289  AHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQM 348
                   + +L +S   SS    +    L           LE+ + +   AK   +K Q+
Sbjct: 88   -------EKQLRNS---SSGNNRINYCSLGFSHLFLSQYFLEQYFASQTRAKAKQFKTQL 147

Query: 349  QNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVITAKSR 408
            Q+ KKGG T+ EY +K+K   DSL ++G  +STKDH+  IL GL  +Y++ V+ +  ++ 
Sbjct: 148  QHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESILDGLPNDYESFVTSVILRND 207

Query: 409  PLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTG------STNDQKNGS 468
              +++E+  LL AHESR E++  ++D S P+ ++   ++ +KG        + N Q + S
Sbjct: 208  DFSVEEIEALLMAHESRVEKNNNSLDSS-PSAHVASSNAVEKGNRFKQDYYAANSQGSHS 267

Query: 469  SYH---------------------NNGPNSFRGRGGRNFRGNRG-------WNGN----K 528
             Y+                     N   N    RGG   RGN+G       WN +    K
Sbjct: 268  GYNGGFGRGGDFGRRGGFYGGRGFNWNYNGRSNRGGFRGRGNKGSFQARPPWNSDNQNEK 327

Query: 529  PQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQMVQQPFQQSFSGNNSVGNQNYPM 588
            P CQLCG+ GH   +CY RFD  F               Q P  Q+ S  NS     Y  
Sbjct: 328  PACQLCGKIGHVVAQCYYRFDHTF---------------QVP--QNLSSRNSSPRAYYSF 387

Query: 589  QSHPMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNGAGLSIN 648
             S  +  ++    +  D NWYPDSGASNHVT +  NL  S+     N+VHVGNG GLSI 
Sbjct: 388  -SPQVNGVIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIK 447

Query: 649  HIGSSHLYSS-NNQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVKDRQTG 708
            HIG S   S  +++  LLN+LLHVP ITKNLLSVS+FAKDN VFFEFH   CFVKD+ T 
Sbjct: 448  HIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQ 507

Query: 709  TILLQGLMHEGLYKF---HLHPSKTQDLKQASLVPPLSSSSSTTAHVLACTSENTKANVI 768
             +L+ G + +GLY F   HL    TQ L ++  V   S SS        CT+  + ++  
Sbjct: 508  AVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSK------VCTT--SLSSTF 567

Query: 769  DLWHKRLGHAATPIVSQILKECNISFTNN-STSFCSACAIGKSHALPFYPSQTIISTPLS 828
            DLWHKRLGH +   +  +L +CN++  N   ++FCS+C +GK H  PF  S T  + PL 
Sbjct: 568  DLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLE 627

Query: 829  LIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVEKLLGH 888
            LI  DLWGP +  S +G+RYYI FVD +SRF+W++ L++KSEA  TF+ FK  VE     
Sbjct: 628  LIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDL 687

Query: 889  SIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTLLSQAS 948
             IK LQTD GGEFRA   YL   GI+HRV+CP+T QQNG+ ERKHR IV+ GLTLL  AS
Sbjct: 688  KIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTAS 747

Query: 949  LPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCLRPYND 1008
            LPL+FWD++F   VY  NRLPT +L    P+E LF   PDYSF K FGC CFP LRPYN 
Sbjct: 748  LPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNT 807

Query: 1009 HKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSFLHS----SSV 1068
            HKLQ+RS  C FLGYS  H+GYKC+   GRV+IS  V FNE+SFPY ++   S    S+V
Sbjct: 808  HKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLSTV 867

Query: 1069 KPLPIHSSINSFLPVL----ISSPTS--SQFTSTSQPSTIVPTSQPLDPATEVAIASPSA 1128
             P   H S ++  PVL    + +PTS  S     S+   IV T  P  P +     +P+ 
Sbjct: 868  SPSTSHLSPSASPPVLSPTMLPTPTSPISSARPISEMDNIVST-HPHAPNSADTTLTPAQ 927

Query: 1129 STSHSPLTNID--LSHIPEPNLTST--PIVTNTHPMVTRSKNGIVCPKVLLAEYIEVEPT 1188
              S+   T +   +S I + ++T T      NTHPM+TR+K+GIV PK+ +A     EP+
Sbjct: 928  VVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIAAI--REPS 987

Query: 1189 TVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTIGCKWVFKIKRNTDGSIARYK 1248
            +V  AL+   W +AM  EY AL +N TWSLVP  +  + IGCKWV+K K N DG++ +YK
Sbjct: 988  SVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYK 1047

Query: 1249 ARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFLHGVLTED 1308
            ARLVAKGFHQ A  D+TETFSPV+KP+T+RV+ T AL+  W I QLD+NNAFL+G L E+
Sbjct: 1048 ARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEE 1107

Query: 1309 VFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKADTSLLFR 1368
            VFM+QP GF    +  LVC+LHKALYGLKQAPRAWF++L   LL+ GF  +K+D SL  R
Sbjct: 1108 VFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLR 1167

Query: 1369 HVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEVSYPKDGG 1428
               +   Y+L+YVDDI+++GS ++ IT LI+ LN +FSLKDLG ++YFLGI+VS+  + G
Sbjct: 1168 FTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSH-TNNG 1227

Query: 1429 LFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVGALQYATI 1488
            L LSQTKYI DLL K KM    P  TP+ +G  +   +G+   D+H YRS VGALQY TI
Sbjct: 1228 LHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTI 1287

Query: 1489 TRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLYGYADADW 1548
            TRPE+++SVNKVCQFM +PT+ HW+ VKRILRYL+G+   GL L+K SNL L G+ DADW
Sbjct: 1288 TRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADW 1347

Query: 1549 ASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIWLQALLAE 1608
            ASD DDR+STSG C+F G NL++W SKKQ I+SRSS E E+RSLA   AE+ WL++LL+E
Sbjct: 1348 ASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLLSE 1407

Query: 1609 LQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELDIYFVRDLVLQKRLMIQHLPAFAQ 1645
            LQ+P ++PP++WCDNL  V LSANPVLH+RTKH+ELD+YFVR+ V++K + ++H+P+  Q
Sbjct: 1408 LQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVPSADQ 1450

[Close]

BLAST of Sgr012076 vs. ExPASy TrEMBL
Match: A0A438K147 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2516 PE=4 SV=1)

HSP 1 Score: 1199.9 bits (3103), Expect = 0.0e+00
Identity = 669/1478 (45.26%), Postives = 896/1478 (60.62%), Query Frame = 0


Query: 229  SHTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSSTNDGSPSTVEEANP 288
            +H+  + L   N+L+WK QI+  ++GYGL+ ++  DD  P  +L+  +  S    +E   
Sbjct: 26   NHSLSVKLDNKNFLIWKQQIVSAIRGYGLQKFVFSDDEVPVQFLTREDARSGKATKE--- 85

Query: 289  AHLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQM 348
              L W +QD+L+ SWLLSS++E +L  ++ C+TS  +W  LE+ + +   AK   +K Q+
Sbjct: 86   -FLEWEQQDQLLLSWLLSSVSESILPRLVGCDTSSLLWGRLEQYFASQTRAKAKQFKTQL 145

Query: 349  QNLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVITAKSR 408
            Q+ KKGG T+ EY +K+K   DSL ++G  +STKDH+  IL GL  +Y++ ++ +  ++ 
Sbjct: 146  QHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESILDGLPNDYESFITSVILRND 205

Query: 409  PLTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSSSKKGTG------STNDQKNGS 468
              +++E+  LL AHESR E++  ++D S P+ ++   ++ +KG        + N Q N S
Sbjct: 206  DFSVEEIEALLMAHESRVEKNNSSLDSS-PSAHVASSNAVEKGNRFKQDYYAANSQGNHS 265

Query: 469  SYHN------------------------NGPNS---FRGRGGRNFRGNRG-------WNG 528
             Y+                         NG ++   FRGRGG   RGNRG       WN 
Sbjct: 266  GYNGSFGRGGDFGRRGGFNGGRGFNWNYNGRSNRGGFRGRGGFRGRGNRGNFQARPPWNS 325

Query: 529  N----KPQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQMVQQPFQQSFSGNNSVG 588
            +    KP CQLCG+ GH   +CY RFD  F               Q P  Q+ SG N   
Sbjct: 326  DNQNEKPACQLCGKIGHVVAQCYYRFDHTF---------------QVP--QNLSGRNPSP 385

Query: 589  NQNYPMQSHPMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLAVSSPCTSDNRVHVGNG 648
               Y   S  +  ++    +  D NWYPDSGASNHVT +  NL  S      N+VHVGNG
Sbjct: 386  RAYYSF-SPQVNGVIPTSEVFSDDNWYPDSGASNHVTPNPANLMKSVEFAGQNQVHVGNG 445

Query: 649  AGLSINHIGSSHLYSSNNQSFLLNNLLHVPHITKNLLSVSQFAKDNDVFFEFHPLVCFVK 708
             G                                                  +P    V 
Sbjct: 446  TG--------------------------------------------------NPSCSNV- 505

Query: 709  DRQTGTILLQGLMHEGLYKF---HLHPSKTQDLKQASLVPPLSSSSSTTAHVLACTSENT 768
                      G + +GLY F   HL    TQ L ++  V   S SS      L+ T    
Sbjct: 506  ----------GKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCIASLSST---- 565

Query: 769  KANVIDLWHKRLGHAATPIVSQILKECNISFTNN-STSFCSACAIGKSHALPFYPSQTII 828
                 DLWHKRLG  +   +  +L +CN++  N   ++FCS+C +GK H  PF  S T  
Sbjct: 566  ----FDLWHKRLGQPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHMFPFSLSHTTY 625

Query: 829  STPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSKSEAYSTFLTFKIHVE 888
            + PL LI +DLWGPA   S +G+RYYI FVD +SRF+W++ L++KSEA  TF+ FK  VE
Sbjct: 626  TKPLELIHSDLWGPAPVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVE 685

Query: 889  KLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGIVERKHRHIVDMGLTL 948
                  IK LQTD GGEFRA   YL   GI+HRV+CP+T QQNG+ ERKHR IV+ GLTL
Sbjct: 686  LQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTL 745

Query: 949  LSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPDYSFFKTFGCLCFPCL 1008
            L   SLPL+FWD++F   VY  NRLPT VL    P+E LF   PDYSF K FGC CFP L
Sbjct: 746  LHTVSLPLKFWDESFRTVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFPNL 805

Query: 1009 RPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDRTGRVFISRHVQFNESSFPYLQSFLHS-- 1068
            RPYN HKLQ+RS  C FLGYS  H+GYKC+   GRV+ISR V FNE+SFPY ++   S  
Sbjct: 806  RPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISRDVIFNETSFPYSKTIQVSSC 865

Query: 1069 --SSVKPLPIHSSINSFLPVL----ISSPTS--SQFTSTSQPSTIVPTSQPLDPATEVAI 1128
              S+V P   H S ++  PVL    + +PTS  S     S+   IV T  P  P +    
Sbjct: 866  LPSTVSPSTSHLSPSASPPVLSPTMLPAPTSPISSARPISEMDNIVST-HPHAPNSADTT 925

Query: 1129 ASPSASTSHSPLTNID--LSHIPEPNLTST--PIVTNTHPMVTRSKNGIVCPKVLLAEYI 1188
             +P+   S+   T +   +S I + ++T T      NTHPM+TR+K+GIV PK+ +A   
Sbjct: 926  LTPAQVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIAAV- 985

Query: 1189 EVEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTIGCKWVFKIKRNTDGS 1248
              EP++V  AL+   W +AM  EY AL +N TWSLVP  +  + IGCKWV+K K N DG+
Sbjct: 986  -REPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGT 1045

Query: 1249 IARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFLHG 1308
            + +YKARLVAKGFHQ A  D+TETFSPV+KP+TIRV+ T AL+  W I QLD+NNAFL+G
Sbjct: 1046 VQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTIRVVFTIALSRNWAIKQLDVNNAFLNG 1105

Query: 1309 VLTEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKADT 1368
             L E+VFM+QP GF    +  LVC+LHKALYGLKQAPRAWF++L   LL+ GF  +K+D 
Sbjct: 1106 DLQEEVFMQQPQGFIDEKNPNLVCRLHKALYGLKQAPRAWFEKLHQALLSFGFVSAKSDQ 1165

Query: 1369 SLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEVSY 1428
            SL  R   S   Y+L+YVDDI+++GS ++ IT LI+ LN +FSLKDLG ++YFLGI+VS+
Sbjct: 1166 SLFLRFTPSHITYVLVYVDDILVIGSDTTTITSLIAQLNSEFSLKDLGEVHYFLGIQVSH 1225

Query: 1429 PKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVGAL 1488
              + GL LSQTKYI DLL K KM    P  TP+ +G  + A +G+   D+H YRS VGAL
Sbjct: 1226 -TNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRAGDGDPVDDLHGYRSTVGAL 1285

Query: 1489 QYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLYGY 1548
            QY TITRPE+++SVNKVCQFM +PT+ HW+AVKRILRYL+G+   GL L+K SNL L G+
Sbjct: 1286 QYVTITRPELSFSVNKVCQFMQNPTEEHWKAVKRILRYLQGTLQHGLHLKKSSNLDLIGF 1345

Query: 1549 ADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIWLQ 1608
             DADWASD DDR+STSG C+F G NL++W SKKQ  +SRSSTEAE+RSLA   AE+ WL+
Sbjct: 1346 CDADWASDLDDRRSTSGHCVFLGPNLISWQSKKQHTVSRSSTEAEYRSLAGLVAEITWLR 1405

Query: 1609 ALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELDIYFVRDLVLQKRLMIQHL 1645
            +LL+ELQ+P ++PP++WCDNL  V LSANPVLH+RTKH+ELD+YFV + V++K + ++H+
Sbjct: 1406 SLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVHEKVIRKEVEVRHV 1407

[Close]

BLAST of Sgr012076 vs. ExPASy TrEMBL
Match: A0A2N9IMQ9 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54034 PE=3 SV=1)

HSP 1 Score: 1196.8 bits (3095), Expect = 0.0e+00
Identity = 660/1438 (45.90%), Postives = 876/1438 (60.92%), Query Frame = 0


Query: 230  HTKVITLTESNYLVWKLQILRTLQGYGLEDYILDDDGTPSLYLSSTNDGSPSTVEEANPA 289
            H   I LT  NYL+WK Q++  L+G  L  ++      P   +++++DG+ +T+   NP 
Sbjct: 242  HLITIKLTRENYLLWKAQVVPYLRGQHLFQFVDGSSTIPQPIITASSDGASTTL--LNPE 301

Query: 290  HLLWTRQDRLISSWLLSSMTEGVLEDVLDCETSREIWKTLEEMYVTSNLAKNMSYKNQMQ 349
               W  QD+++ S L+SS++E V+  V+ C TSR++W TLE M+   + A+ M    Q+ 
Sbjct: 302  FTQWQLQDQIVLSALISSLSEKVIAHVVKCTTSRDLWATLERMFTAQSQARLMQIHYQLS 361

Query: 350  NLKKGGMTLKEYFSKMKKLADSLKAIGEKVSTKDHIIYILSGLGVEYDAIVSVITAKSRP 409
             L+KG  ++ ++F     LAD+L AI + +     + ++L+GLG EYD+ V+ +  ++ P
Sbjct: 362  TLRKGSTSISDFFQSFTGLADTLAAIDQPLPEFQLVSFLLAGLGPEYDSFVTSVQQRTEP 421

Query: 410  LTLQEVYGLLYAHESRSERSTVNIDGSVPTVNLTQQSS-SKKGTGSTNDQKNGSSYHNNG 469
            +TL  +YG L  HE+R E+S   +     + N   + + S+ G G  N   + +    + 
Sbjct: 422  ITLDYLYGHLLTHETRLEQSQAPVSLETASANFVSRGTFSRNGRGGRNHSSSSNGRGQST 481

Query: 470  PNSFRGRGGRNFRGNRGWNGNKPQCQLCGRFGHTALKCYQRFDPNFHGNNGGLNHQGNQM 529
              SFR   GR  RG       +P CQ+C R GH AL CY RFD NF              
Sbjct: 482  SPSFRYNRGRG-RGRNSPTDARPVCQVCNRTGHVALHCYHRFDNNF-------------- 541

Query: 530  VQQPFQQSFSGNNSVGNQNYPMQSHPMQAMMVAPNINLDTNWYPDSGASNHVTNDFGNLA 589
                               Y  +S  MQA         D NWY D+GA+NH+T+D  NL 
Sbjct: 542  -------------------YSERSAAMQAYFSTQQAPTDPNWYTDTGATNHLTSDLANLN 601

Query: 590  V-SSPCTSDNRVHVGNGAGLSINHIGSSHLYSSNNQSFLLNNLLHVPHITKNLLSVSQFA 649
            V S      +++ VGNG GLS+ H G+S L S+   SF+LNN+LHVP ITKNL+SV +F 
Sbjct: 602  VHSEEYLGSDQIRVGNGKGLSVAHTGTSTL-STPYSSFILNNVLHVPQITKNLISVQKFT 661

Query: 650  KDNDVFFEFHPLVCFVKDRQTGTILLQGLMHEGLYKFHLHPSKTQDLKQASLVPPLSSSS 709
             D D F EFHP    VKDR T  +L +G    GLY F                    ++S
Sbjct: 662  SDTDTFMEFHPSYFLVKDRPTKKLLHKGPSKHGLYPF--------------------TTS 721

Query: 710  STTAHVLACTSENTKANVIDLWHKRLGHAATPIVSQILKECNISFT--NNSTSFCSACAI 769
            ST+ + LA   E      ID WH RLGH A  +VS+IL + ++     NN    C AC  
Sbjct: 722  STSTNPLALIGERAS---IDRWHSRLGHPAFKVVSRILSKFSLPVVRKNNGHLSCPACLS 781

Query: 770  GKSHALPFYPSQTIISTPLSLIETDLWGPAVKSSKNGFRYYISFVDVYSRFTWVYFLQSK 829
             KS  L F PS T ++ PL LI TD+WGP+   S NGF+YY+SF+D YSR+ W++ +  K
Sbjct: 782  SKSKQLAFSPSPTRVNNPLELIYTDVWGPSPIISTNGFKYYVSFLDAYSRYLWLFPMTCK 841

Query: 830  SEAYSTFLTFKIHVEKLLGHSIKMLQTDGGGEFRALAPYLKSQGIIHRVTCPYTSQQNGI 889
            +E +S F+TF+  VE+L    IK +Q+D GGEFR L  +  S GI HR++CP+T QQNG 
Sbjct: 842  NEVFSIFVTFQKRVERLFDCKIKYVQSDWGGEFRTLPKFFNSLGITHRLSCPHTHQQNGA 901

Query: 890  VERKHRHIVDMGLTLLSQASLPLEFWDDAFSAAVYTINRLPTTVLSGISPVEKLFGKKPD 949
            +ERKHRHIV+ GL LLS A +PL++WDDAFS A Y INRLPT +L   +P E LF  KP+
Sbjct: 902  IERKHRHIVETGLALLSHAHVPLQYWDDAFSTACYLINRLPTPLLKYNTPYETLFHSKPN 961

Query: 950  YSFFKTFGCLCFPCLRPYNDHKLQFRSAPCVFLGYSNMHRGYKCLDR-TGRVFISRHVQF 1009
            Y F K FGC C+P LRPYN HKLQ RS  C+FLGYS +H+GYKCL   +GR++ISR V F
Sbjct: 962  YPFLKVFGCACWPNLRPYNKHKLQPRSLRCIFLGYSPLHKGYKCLHHPSGRIYISRDVIF 1021

Query: 1010 NESSFPYLQSFLHSSSVKPLPIHSSINSFLPVLISSPTSSQFTSTSQPSTIVPTSQPLDP 1069
             E++FP     L +      P   S +S LP+L++   S Q    + P  I+  S P  P
Sbjct: 1022 EETNFP-----LQNGPPILTPPTQSTSSGLPLLLTPTISLQARPNNPPPPII--SSPSSP 1081

Query: 1070 ATEVAIASPSASTSHSPLTNIDLSHIPEPNL---TSTPIVTNTHPMVTRSKNGIVCPK-- 1129
             +  A    S  TS  P T       P P+L   T TPIV ++HPMVTRSK  I  PK  
Sbjct: 1082 ISPAAPIISSTETSQPPSTTQPSHSPPTPSLPSQTHTPIV-SSHPMVTRSKVNISKPKQF 1141

Query: 1130 -----------VLLAEYIE--VEPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSS 1189
                        LLAE      EPT    A++ P W +AM  E+ AL+KN TW+LVP + 
Sbjct: 1142 HDGTVRYPLPHALLAENDPSLSEPTCYSSAVKIPQWREAMNAEFDALLKNHTWTLVPSTQ 1201

Query: 1190 THKTIGCKWVFKIKRNTDGSIARYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTY 1249
                +G KWVF++KR  DGS+ RYKARLVAKGFHQ   IDYTETFSPV+KPTT+R +L+ 
Sbjct: 1202 ARNLVGNKWVFRVKRRADGSVERYKARLVAKGFHQQPGIDYTETFSPVVKPTTVRTVLSL 1261

Query: 1250 ALANGWQIHQLDINNAFLHGVLTEDVFMEQPPGFSISGSSPLVCKLHKALYGLKQAPRAW 1309
            AL+  W + QLD+ NAFLHG L+E+V+M QPPGF+       VCKLHKALYGLKQAPRAW
Sbjct: 1262 ALSKNWFVRQLDVQNAFLHGCLSEEVYMTQPPGFNHPQFPNHVCKLHKALYGLKQAPRAW 1321

Query: 1310 FDRLSSFLLALGFKCSKADTSLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNH 1369
            F RL+++LL  GF  S++D+SL   H      Y LIYVDDI+I  S +S I  L+  L  
Sbjct: 1322 FSRLTTWLLHFGFTASQSDSSLFIYHHTDYTMYFLIYVDDIIITCSQASAIGSLLHQLGS 1381

Query: 1370 QFSLKDLGRLNYFLGIEVSYPKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVS 1429
            +F++KDLG LNYFLGIEV  P   G+ LSQ KYI D+L + KM EA P+++PM S + +S
Sbjct: 1382 EFAVKDLGGLNYFLGIEV-VPCTPGVLLSQKKYILDILTRTKMSEAKPVSSPMASSTHLS 1441

Query: 1430 AFNGEKFSDVHFYRSIVGALQYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLK 1489
               G+   D   YRS VGALQY +ITRP+IA+SVNK+ QFMH+PT +HWQ+VKR+LRYLK
Sbjct: 1442 VLEGDPCDDPTLYRSTVGALQYLSITRPDIAFSVNKLSQFMHNPTTLHWQSVKRLLRYLK 1501

Query: 1490 GSFTSGLLLRKPSNLGLYGYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRS 1549
             +   GL ++  S   L G+ DADWA D DDR+ST G+CIF G NLV+W  KKQ+ ++RS
Sbjct: 1502 QTIHFGLHIQPSSTTDLQGFTDADWAGDRDDRRSTGGYCIFLGSNLVSWSCKKQATVARS 1561

Query: 1550 STEAEFRSLANTSAELIWLQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVE 1609
            STEAE+++LAN +AE+ W  ALL EL +    PPILWCDN+GA +LS+NPV H+RTKHVE
Sbjct: 1562 STEAEYKALANAAAEITWFTALLKELGVSLKSPPILWCDNIGATYLSSNPVFHARTKHVE 1609

Query: 1610 LDIYFVRDLVLQKRLMIQHLPAFAQLADIFTKPLSATSFLHIRSKLNVCDAYDIGLRG 1645
            +D +FVRD+V  + + I+ L +  QLADIFTKPLS   F  +R+KLNV     +GLRG
Sbjct: 1622 IDFHFVRDMVASRTIDIRFLCSKDQLADIFTKPLSTARFALLRTKLNVV-PLPLGLRG 1609

[Close]

BLAST of Sgr012076 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-111
Identity = 205/497 (41.25%), Postives = 303/497 (60.97%), Query Frame = 0


Query: 1129 EPTTVKEALRCPHWLQAMKDEYAALMKNGTWSLVPHSSTHKTIGCKWVFKIKRNTDGSIA 1188
            EP+T  EA     W  AM DE  A+    TW +       K IGCKWV+KIK N+DG+I 
Sbjct: 85   EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 1189 RYKARLVAKGFHQMADIDYTETFSPVIKPTTIRVLLTYALANGWQIHQLDINNAFLHGVL 1248
            RYKARLVAKG+ Q   ID+ ETFSPV K T+++++L  +    + +HQLDI+NAFL+G L
Sbjct: 145  RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204

Query: 1249 TEDVFMEQPPGFSISGSSPL----VCKLHKALYGLKQAPRAWFDRLSSFLLALGFKCSKA 1308
             E+++M+ PPG++      L    VC L K++YGLKQA R WF + S  L+  GF  S +
Sbjct: 205  DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264

Query: 1309 DTSLLFRHVGSSKCYILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEV 1368
            D +   +   +    +L+YVDDI+I  ++ + + +L S L   F L+DLG L YFLG+E+
Sbjct: 265  DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324

Query: 1369 SYPKDGGLFLSQTKYITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVG 1428
            +     G+ + Q KY  DLL +  +    P + PM      SA +G  F D   YR ++G
Sbjct: 325  A-RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 384

Query: 1429 ALQYATITRPEIAYSVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLY 1488
             L Y  ITR +I+++VNK+ QF  +P   H QAV +IL Y+KG+   GL     + + L 
Sbjct: 385  RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 444

Query: 1489 GYADADWASDPDDRKSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIW 1548
             ++DA + S  D R+ST+G+C+F G +L++W SKKQ ++S+SS EAE+R+L+  + E++W
Sbjct: 445  VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 504

Query: 1549 LQALLAELQIPTSRPPILWCDNLGAVHLSANPVLHSRTKHVELDIYFVRDLVLQKRLMIQ 1608
            L     ELQ+P S+P +L+CDN  A+H++ N V H RTKH+E D + VR+  + +  +  
Sbjct: 505  LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSY 564

Query: 1609 HLPAFAQLADIFTKPLS 1622
               A+ +  D FT+ LS
Sbjct: 565  SFQAYDE-QDGFTEYLS 579

[Close]

BLAST of Sgr012076 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-57
Identity = 110/229 (48.03%), Postives = 158/229 (69.00%), Query Frame = 0


Query: 1319 YILIYVDDIVIMGSSSSEITQLISLLNHQFSLKDLGRLNYFLGIEVSYPKDGGLFLSQTK 1378
            Y+L+YVDDI++ GSS++ +  LI  L+  FS+KDLG ++YFLGI++      GLFLSQTK
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIK-THPSGLFLSQTK 61

Query: 1379 YITDLLHKAKMFEANPITTPMVSGSVVSAFNGEKFSDVHFYRSIVGALQYATITRPEIAY 1438
            Y   +L+ A M +  P++TP+    + S+ +  K+ D   +RSIVGALQY T+TRP+I+Y
Sbjct: 62   YAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 121

Query: 1439 SVNKVCQFMHSPTQVHWQAVKRILRYLKGSFTSGLLLRKPSNLGLYGYADADWASDPDDR 1498
            +VN VCQ MH PT   +  +KR+LRY+KG+   GL + K S L +  + D+DWA     R
Sbjct: 122  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 181

Query: 1499 KSTSGFCIFFGGNLVTWGSKKQSIISRSSTEAEFRSLANTSAELIWLQA 1548
            +ST+GFC F G N+++W +K+Q  +SRSSTE E+R+LA T+AEL W  A
Sbjct: 182  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSSA 228

[Close]

BLAST of Sgr012076 vs. TAIR 10
Match: AT5G03620.1 (Subtilisin-like serine endopeptidase family protein )

HSP 1 Score: 181.4 bits (459), Expect = 5.8e-45
Identity = 94/186 (50.54%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 21  VPPGDVRSPRDTNGHGTHTAS------------------TARGGVPSARIAVYKICWSDG 80
           +P G+  +  D +GHGTHT+S                  TARGGVPSARIA YK+CW  G
Sbjct: 196 LPDGEGDTAADHDGHGTHTSSTIAGVSVSSASLFGIANGTARGGVPSARIAAYKVCWDSG 255

Query: 81  CFDADILAAFDDIIADSVDIISLSVGPKKPKPYLEDSIAIGTFHAMKHGILTSNSAGNNG 140
           C D D+LAAFD+ I+D VDIIS+S+G     P+ ED IAIG FHAMK GILT+ SAGNNG
Sbjct: 256 CTDMDMLAAFDEAISDGVDIISISIGGAS-LPFFEDPIAIGAFHAMKRGILTTCSAGNNG 315

Query: 141 PKYYTTANGAPWSLSVAASSIDRKFKAQVQLGNGNIYQGVAINTFDLMGRQYPLIYAGDA 189
           P  +T +N APW ++VAA+S+DRKF+  V+LGNG    G+++N F+   + YPL     A
Sbjct: 316 PGLFTVSNLAPWVMTVAANSLDRKFETVVKLGNGLTASGISLNGFNPRKKMYPLTSGSLA 375

[Close]

BLAST of Sgr012076 vs. TAIR 10
Match: AT4G00230.1 (xylem serine peptidase 1 )

HSP 1 Score: 169.9 bits (429), Expect = 1.8e-41
Identity = 95/195 (48.72%), Postives = 121/195 (62.05%), Query Frame = 0


Query: 21  VPPGDVRSPRDTNGHGTHTAS------------------TARGGVPSARIAVYKICWS-D 80
           VP G+VRSP D +GHGTHT+S                  TARG VPSAR+A+YK+CW+  
Sbjct: 196 VPAGEVRSPIDIDGHGTHTSSTVAGVLVANASLYGIANGTARGAVPSARLAMYKVCWARS 255

Query: 81  GCFDADILAAFDDIIADSVDIISLSVGPKKPKPYLEDSIAIGTFHAMKHGILTSNSAGNN 140
           GC D DILA F+  I D V+IIS+S+G      Y  DSI++G+FHAM+ GILT  SAGN+
Sbjct: 256 GCADMDILAGFEAAIHDGVEIISISIG-GPIADYSSDSISVGSFHAMRKGILTVASAGND 315

Query: 141 GPKYYTTANGAPWSLSVAASSIDRKFKAQVQLGNGNIYQGVAINTFDLMGRQYPLIYAGD 196
           GP   T  N  PW L+VAAS IDR FK+++ LGNG  + G+ I+ F    + YPL+   D
Sbjct: 316 GPSSGTVTNHEPWILTVAASGIDRTFKSKIDLGNGKSFSGMGISMFSPKAKSYPLVSGVD 375

[Close]

BLAST of Sgr012076 vs. TAIR 10
Match: AT5G59100.1 (Subtilisin-like serine endopeptidase family protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-41
Identity = 95/200 (47.50%), Postives = 121/200 (60.50%), Query Frame = 0


Query: 27  RSPRDTNGHGTHTAS------------------TARGGVPSARIAVYKICWSDGCFDADI 86
           ++ RD +GHGTHTAS                  TARGGVP+ARIAVYK+C ++GC    +
Sbjct: 196 QTARDYSGHGTHTASIAAGNAVANSNFYGLGNGTARGGVPAARIAVYKVCDNEGCDGEAM 255

Query: 87  LAAFDDIIADSVDIISLSVGPKKPKPYLEDSIAIGTFHAMKHGILTSNSAGNNGPKYYTT 146
           ++AFDD IAD VD+IS+S+      P+ ED IAIG FHAM  G+LT N+AGNNGPK  T 
Sbjct: 256 MSAFDDAIADGVDVISISIVLDNIPPFEEDPIAIGAFHAMAVGVLTVNAAGNNGPKISTV 315

Query: 147 ANGAPWSLSVAASSIDRKFKAQVQLGNGNIYQGVAINTFDLMGRQYPLIYAGDAPNVDGG 206
            + APW  SVAAS  +R F A+V LG+G I  G ++NT+D+ G  YPL+Y   A      
Sbjct: 316 TSTAPWVFSVAASVTNRAFMAKVVLGDGKILIGRSVNTYDMNGTNYPLVYGKSA-----A 375

Query: 207 FSKYTSRANRLATPKILQIK 209
            S  +    RL  PK L  K
Sbjct: 376 LSTCSVDKARLCEPKCLDGK 390

The following BLAST results are available for this feature:

BLAST of Sgr012076 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW60229.1	0.0e+00	47.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW44519.1	0.0e+00	47.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN81099.1	0.0e+00	46.64	hypothetical protein VITISV_017741 [Vitis vinifera]	[more]
RVX14937.1	0.0e+00	45.26	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW64314.1	0.0e+00	45.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Sgr012076 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.7e-273	38.79	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.5e-260	37.61	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	2.5e-157	30.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.4e-122	26.76	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q39547	3.7e-60	57.34	Cucumisin OS=Cucumis melo OX=3656 PE=1 SV=1	[more]

BLAST of Sgr012076 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438FJP6	0.0e+00	47.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438EA49	0.0e+00	47.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5BFT3	0.0e+00	46.64	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A0A438K147	0.0e+00	45.26	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A2N9IMQ9	0.0e+00	45.90	Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB...	[more]

BLAST of Sgr012076 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.2e-111	41.25	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.7e-57	48.03	DNA/RNA polymerases superfamily protein	[more]
AT5G03620.1	5.8e-45	50.54	Subtilisin-like serine endopeptidase family protein	[more]
AT4G00230.1	1.8e-41	48.72	xylem serine peptidase 1	[more]
AT5G59100.1	2.3e-41	47.50	Subtilisin-like serine endopeptidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000209	Peptidase S8/S53 domain	PFAM	PF00082	Peptidase_S8	coord: 27..194 e-value: 5.5E-14 score: 52.1
IPR036852	Peptidase S8/S53 domain superfamily	GENE3D	3.40.50.200	Peptidase S8/S53 domain	coord: 20..143 e-value: 2.3E-58 score: 200.1
IPR036852	Peptidase S8/S53 domain superfamily	SUPERFAMILY	52743	Subtilisin-like	coord: 21..147
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 293..427 e-value: 1.8E-23 score: 82.8
None	No IPR available	GENE3D	3.50.30.30		coord: 144..208 e-value: 2.3E-58 score: 200.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..487
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..473
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 1129..1481 coord: 570..1009
None	No IPR available	PROSITE	PS51892	SUBTILASE	coord: 1..268 score: 12.175333
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1484..1622 e-value: 7.62121E-69 score: 225.81
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 783..879 e-value: 5.1E-8 score: 33.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 779..943 score: 23.765116
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 776..951 e-value: 7.9E-36 score: 125.2
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 707..768 e-value: 1.1E-9 score: 38.0
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1156..1399 e-value: 3.2E-74 score: 249.6
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 782..951
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1155..1590

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr012076.1	Sgr012076.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008236	serine-type peptidase activity