Sgr011616 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr011616
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Integrase, catalytic core
Location	tig00153014: 19840 .. 20130 (+)
RNA-Seq Expression	Sgr011616
Synteny	Sgr011616

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCCGACATAACTACACAAATGATGGGTTTTCAAACATCAAAAGAGTTGTGGGATGTTATGCAAGATCTGTTTGGAGTGCAGTCACGAGCCCAAGAAGACTACTTATGCCAGGTATTTCAACAAACTAGAAAAGGATCCATGACAATGACTGAATATTTAAAAGTTATGAAAACTCATGTTGATAATCTGGCGTTAGCCAATAGTCCTATTACTCTTCGTAGTTTGGTATCACAAATCTTGGCAGGACTAGATGAGGAATACAACCCCATCACTGTTGTAGTTTAG

mRNA sequence

ATGACTTCCGACATAACTACACAAATGATGGGTTTTCAAACATCAAAAGAGTTGTGGGATGTTATGCAAGATCTGTTTGGAGTGCAGTCACGAGCCCAAGAAGACTACTTATGCCAGGTATTTCAACAAACTAGAAAAGGATCCATGACAATGACTGAATATTTAAAAGTTATGAAAACTCATGTTGATAATCTGGCGTTAGCCAATAGTCCTATTACTCTTCGTAGTTTGGTATCACAAATCTTGGCAGGACTAGATGAGGAATACAACCCCATCACTGTTGTAGTTTAG

Coding sequence (CDS)

ATGACTTCCGACATAACTACACAAATGATGGGTTTTCAAACATCAAAAGAGTTGTGGGATGTTATGCAAGATCTGTTTGGAGTGCAGTCACGAGCCCAAGAAGACTACTTATGCCAGGTATTTCAACAAACTAGAAAAGGATCCATGACAATGACTGAATATTTAAAAGTTATGAAAACTCATGTTGATAATCTGGCGTTAGCCAATAGTCCTATTACTCTTCGTAGTTTGGTATCACAAATCTTGGCAGGACTAGATGAGGAATACAACCCCATCACTGTTGTAGTTTAG

Protein sequence

MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKTHVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV

Homology

[Close]

BLAST of Sgr011616 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 130.6 bits (327), Expect = 7.4e-27
Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           M +D+  Q+MGF TS+ELW  +Q+LFGVQSRA+ DYL QVFQQT KGS+ M EYLK+MK+
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV 97
           H DNLALA S +++R LVSQ+L GLDEEYNPI V V
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAV 213

[Close]

BLAST of Sgr011616 vs. NCBI nr
Match: XP_022148963.1 (uncharacterized protein LOC111017501 [Momordica charantia])

HSP 1 Score: 125.6 bits (314), Expect = 2.4e-25
Identity = 57/96 (59.38%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           MT ++ TQ+MG++ + +LW  +Q+LFGVQS+A+EDYL QVFQQTRKGS+ MT++L+VMK+
Sbjct: 53  MTPEVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKS 112

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV 97
           H DNL  A SP+  RSL+SQ+L GLDEEYNP+   +
Sbjct: 113 HADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATI 148

[Close]

BLAST of Sgr011616 vs. NCBI nr
Match: XP_038896600.1 (uncharacterized protein LOC120084860 [Benincasa hispida])

HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24
Identity = 57/94 (60.64%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 1  MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
          M  D+  Q+MG++T+KELW  +Q+LFGVQSRA+EDYL Q+FQQTRKG   M+ YLK+MK 
Sbjct: 1  MALDVAVQLMGYETAKELWQAIQELFGVQSRAEEDYLRQLFQQTRKGGQKMSGYLKLMKL 60

Query: 61 HVDNLALANSPITLRSLVSQILAGLDEEYNPITV 95
          H DNLA  +SP++ R+L+SQ+L GLDEEYN + V
Sbjct: 61 HSDNLAQTSSPVSTRTLISQVLLGLDEEYNLVVV 94

[Close]

BLAST of Sgr011616 vs. NCBI nr
Match: XP_038902487.1 (uncharacterized protein LOC120089143 [Benincasa hispida])

HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23
Identity = 57/96 (59.38%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           MT+++  Q+MG++  K LW  +Q+LFG+QSRA EDYL QVFQQT KG+M M EYL+VMKT
Sbjct: 151 MTAEVAMQVMGYENYKYLWAAIQELFGLQSRAGEDYLRQVFQQTCKGAMKMPEYLRVMKT 210

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV 97
           H DNL L  SP+  R+LVSQ+L GLDEE+NP    +
Sbjct: 211 HSDNLGLTGSPVPTRALVSQVLLGLDEEFNPFVATI 246

[Close]

BLAST of Sgr011616 vs. NCBI nr
Match: KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 2.7e-21
Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           MT D+  Q+MGF   ++LWD  QD FGVQSRA+ED+L Q+ Q TRKG+  M EYL VMKT
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVMKT 182

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV 97
           +VDNL    SP+  R+L+SQ+L GLDE YN + VV+
Sbjct: 183 NVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVI 218

[Close]

BLAST of Sgr011616 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.6e-27
Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           M +D+  Q+MGF TS+ELW  +Q+LFGVQSRA+ DYL QVFQQT KGS+ M EYLK+MK+
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV 97
           H DNLALA S +++R LVSQ+L GLDEEYNPI V V
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAV 213

[Close]

BLAST of Sgr011616 vs. ExPASy TrEMBL
Match: A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25
Identity = 57/96 (59.38%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           MT ++ TQ+MG++ + +LW  +Q+LFGVQS+A+EDYL QVFQQTRKGS+ MT++L+VMK+
Sbjct: 53  MTPEVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKS 112

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV 97
           H DNL  A SP+  RSL+SQ+L GLDEEYNP+   +
Sbjct: 113 HADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATI 148

[Close]

BLAST of Sgr011616 vs. ExPASy TrEMBL
Match: A0A5A7UY76 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00940 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21
Identity = 53/91 (58.24%), Postives = 71/91 (78.02%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           MT+++  Q+MGF T+K+L + +QDLFGVQSR +ED+L   FQ TRKG+  M +YL++MKT
Sbjct: 76  MTAEVAFQLMGFNTAKDLEEAIQDLFGVQSRGEEDFLRHTFQTTRKGNSKMEDYLRIMKT 135

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNP 92
           + +NL  A SPI LRSL+SQ+L GLDE YNP
Sbjct: 136 NAENLGQAGSPIPLRSLISQVLLGLDEVYNP 166

[Close]

BLAST of Sgr011616 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21
Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           MT D+  Q+MGF   ++LWD  QD FGVQSRA+ED+L Q+ Q TRKG+  M EYL VMKT
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVMKT 182

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV 97
           +VDNL    SP+  R+L+SQ+L GLDE YN + VV+
Sbjct: 183 NVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVI 218

[Close]

BLAST of Sgr011616 vs. ExPASy TrEMBL
Match: A0A0A0LXB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G496800 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.2e-21
Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 1   MTSDITTQMMGFQTSKELWDVMQDLFGVQSRAQEDYLCQVFQQTRKGSMTMTEYLKVMKT 60
           +T ++  Q++GF  +K++W+   D FGV+SRA+ED+L Q FQ TRKG+  M +YL++MKT
Sbjct: 26  VTPEVVVQLIGFTNAKDMWEATHDFFGVRSRAEEDFLRQTFQTTRKGNSNMEDYLRIMKT 85

Query: 61  HVDNLALANSPITLRSLVSQILAGLDEEYNPITVVV 97
           + DNL  A SPI  R+L+SQ+L GLDE YNP+ VV+
Sbjct: 86  NADNLGQAESPIPRRALISQVLLGLDEVYNPVIVVI 121

The following BLAST results are available for this feature:

BLAST of Sgr011616 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151683.1	7.4e-27	66.67	uncharacterized protein LOC111019598 [Momordica charantia]	[more]
XP_022148963.1	2.4e-25	59.38	uncharacterized protein LOC111017501 [Momordica charantia]	[more]
XP_038896600.1	2.0e-24	60.64	uncharacterized protein LOC120084860 [Benincasa hispida]	[more]
XP_038902487.1	2.9e-23	59.38	uncharacterized protein LOC120089143 [Benincasa hispida]	[more]
KAA0026100.1	2.7e-21	57.29	uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]	[more]

BLAST of Sgr011616 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr011616 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCW4	3.6e-27	66.67	uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1D5J0	1.2e-25	59.38	uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7UY76	1.3e-21	58.24	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7SIT7	1.3e-21	57.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LXB7	2.2e-21	52.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G496800 PE=4 SV=1	[more]

BLAST of Sgr011616 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 2..93 e-value: 7.8E-9 score: 35.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr011616.1	Sgr011616.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding