Sgr008137 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr008137
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	LOB domain-containing protein
Location	tig00006406: 71534 .. 72445 (+)
RNA-Seq Expression	Sgr008137
Synteny	Sgr008137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCGAGGCACAGTGGCGGAGGCTGCACCGGTGGCAATGGTGGTGGCAGCAGTGGCAGCGGACCGTGCGGTGCGTGCAAGTTTCTGCGGAGGAAGTGTCTACCAGGGTGTATATTTGCACCCTACTTCGACTCCGAACAAGGCACGGCTCATTTTGCGGCGGTGCACAAGGTGTTCGGAGCCAGCAATGTGTCGAAGCTGCTTTCACATATTCCAGAACACAAGCGGCTCGATGCGGCTATAACCATATGCTATGAGGCTCAAGCTCGAGTCAGAGAGCCAGTCCTTGGCTGTGTTGCTCATATCTTTGCTCTTCAGCAACAGGTAAAACCAATTAGTTCAGAAAGTTCATGAATGCTATCCAGTTGAGAGTTGACATTTAGAGATAATCTATATCTTCATATGAGAAACACACAGACTTGTATATACAATTTAGTTTTGGTTTCATTTTCATATATTCATTTATATTTTGACAAATGTCAAAAGTTGAGTGCTACACATTTTTTAGGCTGCGAGGTTGCGAGCAGAGCTCTCATATTTACAAGCATATCTAGCAACATCAGAGTTTCCAAGACCCGCACCACATCCACAGGCACAGCCAACGCCTCTGATCAAGCCATCTCTACCCTCAATTGCAAACCTTCCATCAGCTTCCCCCTCTTTGCCCGCTACGTCAGATCTTTCCCTGCTACTCGATCCCGTGGTGCAAGCTTCACGGGCAAAACTGCAGTCTCCGTTGCAACCGTGTCAAATTGGAAGCAACAATTCCCTATCTATGGGCAGCAGGGATCAACAACTCGTCCACAAACAACTGTCCTCTATGCAATGCATTGGTGCCTCACTATTTCCGTACCTCCCAAAACGAGCCTAACCGTGATTGGATTGTGCTCATCTCAGGATTCCTGCTGA

mRNA sequence

ATGAGCTCGAGGCACAGTGGCGGAGGCTGCACCGGTGGCAATGGTGGTGGCAGCAGTGGCAGCGGACCGTGCGGTGCGTGCAAGTTTCTGCGGAGGAAGTGTCTACCAGGGTGTATATTTGCACCCTACTTCGACTCCGAACAAGGCACGGCTCATTTTGCGGCGGTGCACAAGGTGTTCGGAGCCAGCAATGTGTCGAAGCTGCTTTCACATATTCCAGAACACAAGCGGCTCGATGCGGCTATAACCATATGCTATGAGGCTCAAGCTCGAGTCAGAGAGCCAGTCCTTGGCTGTGTTGCTCATATCTTTGCTCTTCAGCAACAGGTTGCGAGCAGAGCTCTCATATTTACAAGCATATCTAGCAACATCAGAGTTTCCAAGACCCGCACCACATCCACAGGCACAGCCAACGCCTCTGATCAAGCCATCTCTACCCTCAATTGCAAACCTTCCATCAGCTTCCCCCTCTTTGCCCGCTACGTCAGATCTTTCCCTGCTACTCGATCCCGTGGTGCAAGCTTCACGGGCAAAACTGCAGTCTCCGTTGCAACCGTGTCAAATTGGAAGCAACAATTCCCTATCTATGGGCAGCAGGGATCAACAACTCGTCCACAAACAACTGTCCTCTATGCAATGCATTGGTGCCTCACTATTTCCGTACCTCCCAAAACGAGCCTAACCGTGATTGGATTGTGCTCATCTCAGGATTCCTGCTGA

Coding sequence (CDS)

ATGAGCTCGAGGCACAGTGGCGGAGGCTGCACCGGTGGCAATGGTGGTGGCAGCAGTGGCAGCGGACCGTGCGGTGCGTGCAAGTTTCTGCGGAGGAAGTGTCTACCAGGGTGTATATTTGCACCCTACTTCGACTCCGAACAAGGCACGGCTCATTTTGCGGCGGTGCACAAGGTGTTCGGAGCCAGCAATGTGTCGAAGCTGCTTTCACATATTCCAGAACACAAGCGGCTCGATGCGGCTATAACCATATGCTATGAGGCTCAAGCTCGAGTCAGAGAGCCAGTCCTTGGCTGTGTTGCTCATATCTTTGCTCTTCAGCAACAGGTTGCGAGCAGAGCTCTCATATTTACAAGCATATCTAGCAACATCAGAGTTTCCAAGACCCGCACCACATCCACAGGCACAGCCAACGCCTCTGATCAAGCCATCTCTACCCTCAATTGCAAACCTTCCATCAGCTTCCCCCTCTTTGCCCGCTACGTCAGATCTTTCCCTGCTACTCGATCCCGTGGTGCAAGCTTCACGGGCAAAACTGCAGTCTCCGTTGCAACCGTGTCAAATTGGAAGCAACAATTCCCTATCTATGGGCAGCAGGGATCAACAACTCGTCCACAAACAACTGTCCTCTATGCAATGCATTGGTGCCTCACTATTTCCGTACCTCCCAAAACGAGCCTAACCGTGATTGGATTGTGCTCATCTCAGGATTCCTGCTGA

Protein sequence

MSSRHSGGGCTGGNGGGSSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVASRALIFTSISSNIRVSKTRTTSTGTANASDQAISTLNCKPSISFPLFARYVRSFPATRSRGASFTGKTAVSVATVSNWKQQFPIYGQQGSTTRPQTTVLYAMHWCLTISVPPKTSLTVIGLCSSQDSC

Homology

[Close]

BLAST of Sgr008137 vs. NCBI nr
Match: XP_022147090.1 (LOB domain-containing protein 18-like [Momordica charantia])

HSP 1 Score: 199.1 bits (505), Expect = 4.2e-47
Identity = 103/130 (79.23%), Postives = 110/130 (84.62%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVF 60
           MS+  SGG CTGGNGG   GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVF
Sbjct: 1   MSTGRSGGSCTGGNGG---GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVF 60

Query: 61  GASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVASRALIFTSI 120
           GASNVSKLL HIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQ+Q A      + +
Sbjct: 61  GASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYL 120

Query: 121 SSNIRVSKTR 131
            + +  S+ R
Sbjct: 121 QAYLAASELR 127

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BLAST of Sgr008137 vs. NCBI nr
Match: XP_008438149.1 (PREDICTED: LOB domain-containing protein 18 [Cucumis melo] >KAA0049032.1 LOB domain-containing protein 18 [Cucumis melo var. makuwa] >TYK17532.1 LOB domain-containing protein 18 [Cucumis melo var. makuwa])

HSP 1 Score: 194.5 bits (493), Expect = 1.0e-45
Identity = 99/112 (88.39%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSSGS-GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MSSR S G CT G GGGS+GS GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHKV
Sbjct: 1   MSSRRSSGSCTKGKGGGSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 60

Query: 61  FGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVA 112
           FGASNVSK+L HIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQ A
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAA 112

[Close]

BLAST of Sgr008137 vs. NCBI nr
Match: XP_004134346.1 (LOB domain-containing protein 18 [Cucumis sativus] >KGN56593.1 hypothetical protein Csa_009651 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-45
Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSSGS-GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MSSR SGG CT G GGGS+GS GPCGACKFLRRKC+P CIFAPYFDSEQG+ HFAAVHKV
Sbjct: 1   MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKV 60

Query: 61  FGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVASRALIFTS 120
           FGASNVSK+L HIPEHKRLDAAITICYEAQARVREPVLGCV+HIFALQQQ A   +  + 
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQIEISY 120

Query: 121 ISSNIRVSK 129
           + + +  S+
Sbjct: 121 LQAYLATSE 129

[Close]

BLAST of Sgr008137 vs. NCBI nr
Match: XP_022980397.1 (LOB domain-containing protein 18-like [Cucurbita maxima])

HSP 1 Score: 191.8 bits (486), Expect = 6.7e-45
Identity = 106/159 (66.67%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSS--GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHK 60
           MSSRH GGGC  GNGG SS    GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHK
Sbjct: 1   MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 60

Query: 61  VFGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVASRALIFT 120
           VFGASNVSKLL HIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQQQ A   +  +
Sbjct: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVQLS 120

Query: 121 SISSNIRVSKTRTTSTGTANASDQAISTLNCKPSISFPL 158
            + + +  S+   T+     A  Q +  L     ++ PL
Sbjct: 121 YLQAYLAASELSRTAP-HPQAQPQDLVKLTIPSIVNLPL 158

[Close]

BLAST of Sgr008137 vs. NCBI nr
Match: XP_023526283.1 (LOB domain-containing protein 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.8 bits (486), Expect = 6.7e-45
Identity = 111/161 (68.94%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSS--GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHK 60
           MSSRH GGGC  GNGG SS    GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHK
Sbjct: 11  MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 70

Query: 61  VFGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVASRALIFT 120
           VFGASNVSKLL HIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQQQ A   +   
Sbjct: 71  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELA 130

Query: 121 SISSNIRVSK-TRTTSTGTANASDQAISTLNCKPSI-SFPL 158
            + + +  S+ +RT     A   D    T+   PSI S PL
Sbjct: 131 YLQAYLAASELSRTAPHPQAQPQDLVKPTI---PSIVSLPL 168

[Close]

BLAST of Sgr008137 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 6.5e-43
Identity = 88/112 (78.57%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 7   GGGCTGG---NGGGSS---GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVF 66
           GGGC GG    GGGSS   G GPCGACKFLRRKC+PGCIFAPYFDSEQG+A+FAAVHKVF
Sbjct: 15  GGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVF 74

Query: 67  GASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVAS 113
           GASNVSKLL HIP H+R DA +TICYEAQAR+R+P+ GCVAHIFALQQQV +
Sbjct: 75  GASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVN 126

[Close]

BLAST of Sgr008137 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38
Identity = 78/107 (72.90%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 6   SGGGCTGGNGGGSSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNV 65
           S G  +  +GG   G GPCGACKFLRRKC+ GCIFAPYFDSEQG AHFAAVHKVFGASNV
Sbjct: 3   SSGNPSSSSGG---GGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNV 62

Query: 66  SKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVAS 113
           SKLL H+PEHKR DA ++IC+EAQAR+R+P+ GCV+HI +LQQQV S
Sbjct: 63  SKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVS 106

[Close]

BLAST of Sgr008137 vs. ExPASy Swiss-Prot
Match: O22132 (LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 14  NGGGSSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLSHIP 73
           NGGG  G GPCGACKFLRRKC+ GC+FAPYFD+EQGTA FAAVHKVFGASN SK+L  +P
Sbjct: 7   NGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLP 66

Query: 74  EHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQV 111
            HKRLDA +T+CYEA AR+R+PV G V H+F+LQ QV
Sbjct: 67  LHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQV 103

[Close]

BLAST of Sgr008137 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.6e-35
Identity = 68/88 (77.27%), Postives = 78/88 (88.64%), Query Frame = 0


Query: 23  PCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLSHIPEHKRLDAAI 82
           PCGACKFLRRKC+ GC+FAPYF  EQG AHFAA+HKVFGASNVSKLL+H+P   R +AA+
Sbjct: 7   PCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRPEAAV 66

Query: 83  TICYEAQARVREPVLGCVAHIFALQQQV 111
           TI YEAQAR+R+P+ GCVAHIFALQQQV
Sbjct: 67  TISYEAQARLRDPIYGCVAHIFALQQQV 94

[Close]

BLAST of Sgr008137 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 68/95 (71.58%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 18  SSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLSHIPEHKR 77
           SS   PCGACKFLRRKC  GC+FAPYF  EQG +HFAA+HKVFGASN SKLLSH+P   R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 78  LDAAITICYEAQARVREPVLGCVAHIFALQQQVAS 113
            +AAITI YEAQAR+++P+ GCV+HIFALQQQV +
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVN 100

[Close]

BLAST of Sgr008137 vs. ExPASy TrEMBL
Match: A0A6J1CZ62 (LOB domain-containing protein 18-like OS=Momordica charantia OX=3673 GN=LOC111016112 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47
Identity = 103/130 (79.23%), Postives = 110/130 (84.62%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVF 60
           MS+  SGG CTGGNGG   GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVF
Sbjct: 1   MSTGRSGGSCTGGNGG---GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVF 60

Query: 61  GASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVASRALIFTSI 120
           GASNVSKLL HIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQ+Q A      + +
Sbjct: 61  GASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYL 120

Query: 121 SSNIRVSKTR 131
            + +  S+ R
Sbjct: 121 QAYLAASELR 127

[Close]

BLAST of Sgr008137 vs. ExPASy TrEMBL
Match: A0A5A7TZR4 (LOB domain-containing protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004010 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 5.0e-46
Identity = 99/112 (88.39%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSSGS-GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MSSR S G CT G GGGS+GS GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHKV
Sbjct: 1   MSSRRSSGSCTKGKGGGSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 60

Query: 61  FGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVA 112
           FGASNVSK+L HIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQ A
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAA 112

[Close]

BLAST of Sgr008137 vs. ExPASy TrEMBL
Match: A0A1S3AVS3 (LOB domain-containing protein 18 OS=Cucumis melo OX=3656 GN=LOC103483345 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 5.0e-46
Identity = 99/112 (88.39%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSSGS-GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MSSR S G CT G GGGS+GS GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHKV
Sbjct: 1   MSSRRSSGSCTKGKGGGSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 60

Query: 61  FGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVA 112
           FGASNVSK+L HIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQ A
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAA 112

[Close]

BLAST of Sgr008137 vs. ExPASy TrEMBL
Match: A0A0A0L4D4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126090 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 8.6e-46
Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSSGS-GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MSSR SGG CT G GGGS+GS GPCGACKFLRRKC+P CIFAPYFDSEQG+ HFAAVHKV
Sbjct: 1   MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKV 60

Query: 61  FGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVASRALIFTS 120
           FGASNVSK+L HIPEHKRLDAAITICYEAQARVREPVLGCV+HIFALQQQ A   +  + 
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQIEISY 120

Query: 121 ISSNIRVSK 129
           + + +  S+
Sbjct: 121 LQAYLATSE 129

[Close]

BLAST of Sgr008137 vs. ExPASy TrEMBL
Match: A0A6J1IR96 (LOB domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111479774 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.3e-45
Identity = 106/159 (66.67%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 1   MSSRHSGGGCTGGNGGGSS--GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHK 60
           MSSRH GGGC  GNGG SS    GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHK
Sbjct: 1   MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 60

Query: 61  VFGASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVASRALIFT 120
           VFGASNVSKLL HIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQQQ A   +  +
Sbjct: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVQLS 120

Query: 121 SISSNIRVSKTRTTSTGTANASDQAISTLNCKPSISFPL 158
            + + +  S+   T+     A  Q +  L     ++ PL
Sbjct: 121 YLQAYLAASELSRTAP-HPQAQPQDLVKLTIPSIVNLPL 158

[Close]

BLAST of Sgr008137 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 175.6 bits (444), Expect = 4.6e-44
Identity = 88/112 (78.57%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 7   GGGCTGG---NGGGSS---GSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVF 66
           GGGC GG    GGGSS   G GPCGACKFLRRKC+PGCIFAPYFDSEQG+A+FAAVHKVF
Sbjct: 15  GGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVF 74

Query: 67  GASNVSKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVAS 113
           GASNVSKLL HIP H+R DA +TICYEAQAR+R+P+ GCVAHIFALQQQV +
Sbjct: 75  GASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVN 126

[Close]

BLAST of Sgr008137 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 78/107 (72.90%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 6   SGGGCTGGNGGGSSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNV 65
           S G  +  +GG   G GPCGACKFLRRKC+ GCIFAPYFDSEQG AHFAAVHKVFGASNV
Sbjct: 3   SSGNPSSSSGG---GGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNV 62

Query: 66  SKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVAS 113
           SKLL H+PEHKR DA ++IC+EAQAR+R+P+ GCV+HI +LQQQV S
Sbjct: 63  SKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVS 106

[Close]

BLAST of Sgr008137 vs. TAIR 10
Match: AT2G45410.1 (LOB domain-containing protein 19 )

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-38
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 14  NGGGSSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLSHIP 73
           NGGG  G GPCGACKFLRRKC+ GC+FAPYFD+EQGTA FAAVHKVFGASN SK+L  +P
Sbjct: 7   NGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLP 66

Query: 74  EHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQV 111
            HKRLDA +T+CYEA AR+R+PV G V H+F+LQ QV
Sbjct: 67  LHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQV 103

[Close]

BLAST of Sgr008137 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 68/95 (71.58%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 18  SSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLSHIPEHKR 77
           SS   PCGACKFLRRKC  GC+FAPYF  EQG +HFAA+HKVFGASN SKLLSH+P   R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 78  LDAAITICYEAQARVREPVLGCVAHIFALQQQVAS 113
            +AAITI YEAQAR+++P+ GCV+HIFALQQQV +
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVN 100

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BLAST of Sgr008137 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34
Identity = 73/106 (68.87%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 6   SGGGCTGGNGGGSSGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNV 65
           SG G T G G       PCGACKFLRRKC   CIFAPYF SEQG A FAA+HKVFGASNV
Sbjct: 4   SGNGTTAGTG------SPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNV 63

Query: 66  SKLLSHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQVA 112
           SKLL ++P H R +A +TI YEAQAR+ +PV GCV+HIFALQQQVA
Sbjct: 64  SKLLLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVA 103

The following BLAST results are available for this feature:

BLAST of Sgr008137 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147090.1	4.2e-47	79.23	LOB domain-containing protein 18-like [Momordica charantia]	[more]
XP_008438149.1	1.0e-45	88.39	PREDICTED: LOB domain-containing protein 18 [Cucumis melo] >KAA0049032.1 LOB dom...	[more]
XP_004134346.1	1.8e-45	76.74	LOB domain-containing protein 18 [Cucumis sativus] >KGN56593.1 hypothetical prot...	[more]
XP_022980397.1	6.7e-45	66.67	LOB domain-containing protein 18-like [Cucurbita maxima]	[more]
XP_023526283.1	6.7e-45	68.94	LOB domain-containing protein 18-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sgr008137 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22131	6.5e-43	78.57	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
O81323	2.8e-38	72.90	LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S...	[more]
O22132	1.8e-37	73.20	LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 S...	[more]
Q5UG13	6.6e-35	77.27	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9M2J7	1.9e-34	71.58	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]

BLAST of Sgr008137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ62	2.0e-47	79.23	LOB domain-containing protein 18-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A5A7TZR4	5.0e-46	88.39	LOB domain-containing protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3AVS3	5.0e-46	88.39	LOB domain-containing protein 18 OS=Cucumis melo OX=3656 GN=LOC103483345 PE=3 SV...	[more]
A0A0A0L4D4	8.6e-46	76.74	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126090 PE=3 SV...	[more]
A0A6J1IR96	3.3e-45	66.67	LOB domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11147977...	[more]

BLAST of Sgr008137 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45420.1	4.6e-44	78.57	LOB domain-containing protein 18	[more]
AT4G00220.1	2.0e-39	72.90	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G45410.1	1.3e-38	73.20	LOB domain-containing protein 19	[more]
AT3G58190.1	1.4e-35	71.58	lateral organ boundaries-domain 29	[more]
AT2G42430.1	2.0e-34	68.87	lateral organ boundaries-domain 16	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 23..112 e-value: 4.2E-35 score: 120.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 22..124 score: 21.950367
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR31529:SF4	LOB DOMAIN-CONTAINING PROTEIN 18	coord: 5..179
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 5..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr008137.1	Sgr008137.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus