Sgr005260 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr005260
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	DELLA protein
Location	tig00003651: 129215 .. 129433 (+)
RNA-Seq Expression	Sgr005260
Synteny	Sgr005260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATGTGGCTCAAAAGCTCGAGCAACTCGAGATGGTGATGGGTTTGTATGAAGAAGATGGGATTGCTCATATTTCTTCCAACACCGACCATTACAATCCCTCCAATCTCTCTGTGCGGGTTCATAGCATCCTTGCTGAGCTCAATACTCCCCTTCAATCCCAACGAGCCAACGACCTAGTTCTCAGCATAGCTGCCACGAAGCTCGAAAGCTAA

mRNA sequence

ATGGCCGATGTGGCTCAAAAGCTCGAGCAACTCGAGATGGTGATGGGTTTGTATGAAGAAGATGGGATTGCTCATATTTCTTCCAACACCGACCATTACAATCCCTCCAATCTCTCTGTGCGGGTTCATAGCATCCTTGCTGAGCTCAATACTCCCCTTCAATCCCAACGAGCCAACGACCTAGTTCTCAGCATAGCTGCCACGAAGCTCGAAAGCTAA

Coding sequence (CDS)

ATGGCCGATGTGGCTCAAAAGCTCGAGCAACTCGAGATGGTGATGGGTTTGTATGAAGAAGATGGGATTGCTCATATTTCTTCCAACACCGACCATTACAATCCCTCCAATCTCTCTGTGCGGGTTCATAGCATCCTTGCTGAGCTCAATACTCCCCTTCAATCCCAACGAGCCAACGACCTAGTTCTCAGCATAGCTGCCACGAAGCTCGAAAGCTAA

Protein sequence

MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQRANDLVLSIAATKLES

Homology

[Close]

BLAST of Sgr005260 vs. NCBI nr
Match: XP_038902950.1 (DELLA protein 1-like [Benincasa hispida])

HSP 1 Score: 90.1 bits (222), Expect = 8.3e-15
Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQ-RAN 60
           MADVA KLEQLEMVMGL EEDGI+H+SSNT HYNPS++S  V S+LAELNTPLQSQ   +
Sbjct: 47  MADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTPLQSQGMIH 106

Query: 61  DLVLSIAATKLES 73
           D VL+IA +   S
Sbjct: 107 DPVLAIAESSSSS 119

[Close]

BLAST of Sgr005260 vs. NCBI nr
Match: XP_004145854.1 (DELLA protein GAI [Cucumis sativus] >KGN57774.1 hypothetical protein Csa_009839 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 3.2e-14
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQR-AN 60
           MADVA KLEQL+MVMGL EEDGI+H+SSNT HYNPS++S  V S+LAELNTPLQSQ   +
Sbjct: 45  MADVALKLEQLDMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTPLQSQGIIH 104

Query: 61  DLVLSIA 67
           D VL+IA
Sbjct: 105 DPVLAIA 111

[Close]

BLAST of Sgr005260 vs. NCBI nr
Match: CCG14222.1 (gibberellin DELLA protein [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 3.2e-14
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQR-AN 60
           MADVA KLEQL+MVMGL EEDGI+H+SSNT HYNPS++S  V S+LAELNTPLQSQ   +
Sbjct: 45  MADVALKLEQLDMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTPLQSQGIIH 104

Query: 61  DLVLSIA 67
           D VL+IA
Sbjct: 105 DPVLAIA 111

[Close]

BLAST of Sgr005260 vs. NCBI nr
Match: XP_008457015.1 (PREDICTED: DELLA protein GAI-like [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 4.1e-14
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQR-AN 60
           MADVA KLEQLEMVMGL EEDGI+H+SSNT HYNPS++S  V S+L ELNTPLQSQ   +
Sbjct: 45  MADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLVELNTPLQSQGIIH 104

Query: 61  DLVLSIA 67
           D VL+IA
Sbjct: 105 DPVLAIA 111

[Close]

BLAST of Sgr005260 vs. NCBI nr
Match: KAA0032820.1 (DELLA protein GAI-like [Cucumis melo var. makuwa] >TYK30378.1 DELLA protein GAI-like [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 4.1e-14
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQR-AN 60
           MADVA KLEQLEMVMGL EEDGI+H+SSNT HYNPS++S  V S+L ELNTPLQSQ   +
Sbjct: 45  MADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLVELNTPLQSQGIIH 104

Query: 61  DLVLSIA 67
           D VL+IA
Sbjct: 105 DPVLAIA 111

[Close]

BLAST of Sgr005260 vs. ExPASy Swiss-Prot
Match: A0A396IUP1 (DELLA protein 1 OS=Medicago truncatula OX=3880 GN=DELLA1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-10
Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQRAND 60
           MADVAQKLEQLEMVMG  +E+GI H+SS+T HY+P++L   V ++L ELN    S + ND
Sbjct: 76  MADVAQKLEQLEMVMGSAQEEGINHLSSDTVHYDPTDLYSWVQTMLTELNP--DSSQIND 135

Query: 61  LVLSIAAT 69
            + S+ ++
Sbjct: 136 PLASLGSS 141

[Close]

BLAST of Sgr005260 vs. ExPASy Swiss-Prot
Match: Q7Y1B6 (DELLA protein GAI OS=Solanum lycopersicum OX=4081 GN=GAI PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.1e-09
Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPL-QSQRAN 60
           MADVAQKLEQLEM MG   EDGI H+S++T H NPS+++  V S+L+ ++T      + N
Sbjct: 57  MADVAQKLEQLEMAMGTTMEDGITHLSTDTVHKNPSDMAGWVQSMLSSISTNFDMCNQEN 116

Query: 61  DLVLS 65
           D+++S
Sbjct: 117 DVLVS 121

[Close]

BLAST of Sgr005260 vs. ExPASy Swiss-Prot
Match: Q2TN88 (DELLA protein SLR1 OS=Oryza sativa subsp. indica OX=39946 GN=SLR1 PE=3 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 5.4e-09
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGL-------YEEDG-IAHISSNTDHYNPSNLSVRVHSILAELNTP 54
           MADVAQKLEQLEM MG+         +DG ++H++++T HYNPS+LS  V S+L+ELN P
Sbjct: 54  MADVAQKLEQLEMAMGMGGVSAPGAADDGFVSHLATDTVHYNPSDLSSWVESMLSELNAP 113

[Close]

BLAST of Sgr005260 vs. ExPASy Swiss-Prot
Match: Q7G7J6 (DELLA protein SLR1 OS=Oryza sativa subsp. japonica OX=39947 GN=SLR1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.4e-09
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGL-------YEEDG-IAHISSNTDHYNPSNLSVRVHSILAELNTP 54
           MADVAQKLEQLEM MG+         +DG ++H++++T HYNPS+LS  V S+L+ELN P
Sbjct: 54  MADVAQKLEQLEMAMGMGGVSAPGAADDGFVSHLATDTVHYNPSDLSSWVESMLSELNAP 113

[Close]

BLAST of Sgr005260 vs. ExPASy Swiss-Prot
Match: Q5BN23 (DELLA protein RGA1 OS=Brassica campestris OX=3711 GN=RGA1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 9.2e-09
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQRAND 60
           MA+VA KLEQLE +MG  +EDG+AH++++T HYNP+ L   + ++L ELN P  +  +N 
Sbjct: 57  MAEVALKLEQLETMMGNAQEDGLAHLATDTVHYNPAELYSWLDNMLTELNPPAATTGSNA 116

Query: 61  L 62
           L
Sbjct: 117 L 117

[Close]

BLAST of Sgr005260 vs. ExPASy TrEMBL
Match: A0A0A0L9X0 (DELLA protein OS=Cucumis sativus OX=3659 GN=Csa_3G289300 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQR-AN 60
           MADVA KLEQL+MVMGL EEDGI+H+SSNT HYNPS++S  V S+LAELNTPLQSQ   +
Sbjct: 45  MADVALKLEQLDMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTPLQSQGIIH 104

Query: 61  DLVLSIA 67
           D VL+IA
Sbjct: 105 DPVLAIA 111

[Close]

BLAST of Sgr005260 vs. ExPASy TrEMBL
Match: W6JXD4 (DELLA protein OS=Cucumis sativus OX=3659 GN=della3 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQR-AN 60
           MADVA KLEQL+MVMGL EEDGI+H+SSNT HYNPS++S  V S+LAELNTPLQSQ   +
Sbjct: 45  MADVALKLEQLDMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTPLQSQGIIH 104

Query: 61  DLVLSIA 67
           D VL+IA
Sbjct: 105 DPVLAIA 111

[Close]

BLAST of Sgr005260 vs. ExPASy TrEMBL
Match: A0A5D3E3K3 (DELLA protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00450 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQR-AN 60
           MADVA KLEQLEMVMGL EEDGI+H+SSNT HYNPS++S  V S+L ELNTPLQSQ   +
Sbjct: 45  MADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLVELNTPLQSQGIIH 104

Query: 61  DLVLSIA 67
           D VL+IA
Sbjct: 105 DPVLAIA 111

[Close]

BLAST of Sgr005260 vs. ExPASy TrEMBL
Match: A0A1S3C4M2 (DELLA protein OS=Cucumis melo OX=3656 GN=LOC103496794 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQR-AN 60
           MADVA KLEQLEMVMGL EEDGI+H+SSNT HYNPS++S  V S+L ELNTPLQSQ   +
Sbjct: 45  MADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLVELNTPLQSQGIIH 104

Query: 61  DLVLSIA 67
           D VL+IA
Sbjct: 105 DPVLAIA 111

[Close]

BLAST of Sgr005260 vs. ExPASy TrEMBL
Match: A0A6J1G9J5 (DELLA protein OS=Cucurbita moschata OX=3662 GN=LOC111452033 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 1  MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNT 52
          MADVA KLEQLEMVMGL EEDGI+H+SSNT HYNPS++S  V S+LAELNT
Sbjct: 45 MADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNT 95

[Close]

BLAST of Sgr005260 vs. TAIR 10
Match: AT2G01570.1 (GRAS family transcription factor family protein )

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-09
Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQRAND 60
           MA+VA KLEQLE +M   +EDG++H++++T HYNPS L   + ++L+ELN P     +N 
Sbjct: 59  MAEVALKLEQLETMMSNVQEDGLSHLATDTVHYNPSELYSWLDNMLSELNPPPLPASSNG 118

Query: 61  L 62
           L
Sbjct: 119 L 119

[Close]

BLAST of Sgr005260 vs. TAIR 10
Match: AT1G66350.1 (RGA-like 1 )

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-08
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQSQRAND 60
           MADVA KLEQLEMV+G    DGI+++S  T HYNPS+LS  V S+L++L+ P + Q   D
Sbjct: 47  MADVAHKLEQLEMVLG----DGISNLSDETVHYNPSDLSGWVESMLSDLD-PTRIQEKPD 101

[Close]

BLAST of Sgr005260 vs. TAIR 10
Match: AT1G14920.1 (GRAS family transcription factor family protein )

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-08
Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 1  MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTP 53
          MADVAQKLEQLE++M   +ED ++ +++ T HYNP+ L   + S+L +LN P
Sbjct: 43 MADVAQKLEQLEVMMSNVQEDDLSQLATETVHYNPAELYTWLDSMLTDLNPP 94

[Close]

BLAST of Sgr005260 vs. TAIR 10
Match: AT3G03450.1 (RGA-like 2 )

HSP 1 Score: 51.2 bits (121), Expect = 4.0e-07
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 1   MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELNTPLQS 56
           MA+VAQKLEQLEMV  L  +D  + + +++ HYNPS+LS  V S+L+ELN P  S
Sbjct: 59  MAEVAQKLEQLEMV--LSNDDVGSTVLNDSVHYNPSDLSNWVESMLSELNNPASS 111

[Close]

BLAST of Sgr005260 vs. TAIR 10
Match: AT5G17490.1 (RGA-like protein 3 )

HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 1  MADVAQKLEQLEMVMGLYEEDGIAHISSNTDHYNPSNLSVRVHSILAELN 51
          MADVAQKLEQLEMV+   +    ++  ++T HYNPS+LS    S+L++LN
Sbjct: 49 MADVAQKLEQLEMVLS-NDIASSSNAFNDTVHYNPSDLSGWAQSMLSDLN 97

The following BLAST results are available for this feature:

BLAST of Sgr005260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902950.1	8.3e-15	69.86	DELLA protein 1-like [Benincasa hispida]	[more]
XP_004145854.1	3.2e-14	73.13	DELLA protein GAI [Cucumis sativus] >KGN57774.1 hypothetical protein Csa_009839 ...	[more]
CCG14222.1	3.2e-14	73.13	gibberellin DELLA protein [Cucumis sativus]	[more]
XP_008457015.1	4.1e-14	73.13	PREDICTED: DELLA protein GAI-like [Cucumis melo]	[more]
KAA0032820.1	4.1e-14	73.13	DELLA protein GAI-like [Cucumis melo var. makuwa] >TYK30378.1 DELLA protein GAI-...	[more]

BLAST of Sgr005260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A396IUP1	2.2e-10	52.94	DELLA protein 1 OS=Medicago truncatula OX=3880 GN=DELLA1 PE=1 SV=1	[more]
Q7Y1B6	4.1e-09	50.77	DELLA protein GAI OS=Solanum lycopersicum OX=4081 GN=GAI PE=2 SV=1	[more]
Q2TN88	5.4e-09	55.74	DELLA protein SLR1 OS=Oryza sativa subsp. indica OX=39946 GN=SLR1 PE=3 SV=2	[more]
Q7G7J6	5.4e-09	55.74	DELLA protein SLR1 OS=Oryza sativa subsp. japonica OX=39947 GN=SLR1 PE=1 SV=1	[more]
Q5BN23	9.2e-09	49.18	DELLA protein RGA1 OS=Brassica campestris OX=3711 GN=RGA1 PE=1 SV=1	[more]

BLAST of Sgr005260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9X0	1.5e-14	73.13	DELLA protein OS=Cucumis sativus OX=3659 GN=Csa_3G289300 PE=3 SV=1	[more]
W6JXD4	1.5e-14	73.13	DELLA protein OS=Cucumis sativus OX=3659 GN=della3 PE=3 SV=1	[more]
A0A5D3E3K3	2.0e-14	73.13	DELLA protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00450 ...	[more]
A0A1S3C4M2	2.0e-14	73.13	DELLA protein OS=Cucumis melo OX=3656 GN=LOC103496794 PE=3 SV=1	[more]
A0A6J1G9J5	1.6e-11	78.43	DELLA protein OS=Cucurbita moschata OX=3662 GN=LOC111452033 PE=3 SV=1	[more]

BLAST of Sgr005260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01570.1	4.3e-09	47.54	GRAS family transcription factor family protein	[more]
AT1G66350.1	1.6e-08	55.00	RGA-like 1	[more]
AT1G14920.1	2.1e-08	50.00	GRAS family transcription factor family protein	[more]
AT3G03450.1	4.0e-07	54.55	RGA-like 2	[more]
AT5G17490.1	2.9e-05	52.00	RGA-like protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	SMART	SM01129	DELLA_2	coord: 1..59 e-value: 1.1E-10 score: 51.5
IPR021914	Transcriptional factor DELLA, N-terminal	PFAM	PF12041	DELLA	coord: 1..52 e-value: 2.9E-19 score: 68.7
IPR038088	DELLA, N-terminal domain superfamily	GENE3D	1.10.10.1290		coord: 1..49 e-value: 6.5E-18 score: 66.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr005260.1	Sgr005260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway
biological_process	GO:0010187	negative regulation of seed germination
biological_process	GO:2000377	regulation of reactive oxygen species metabolic process
biological_process	GO:2000033	regulation of seed dormancy process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009863	salicylic acid mediated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003712	transcription coregulator activity