Homology
BLAST of Sed0028237 vs. NCBI nr
Match:
XP_022966771.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 268.5 bits (685), Expect = 3.5e-68
Identity = 128/147 (87.07%), Postives = 137/147 (93.20%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYCHR QE KAM+LLEEMEKSG+C+PDVQTYY LLKSCFRT
Sbjct: 364 MPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQTYYPLLKSCFRTG 423
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TDNVL KLLDDM+NK HLSLDI TYSLLIHGLCRANKCEWAYQLF KM+GQDIKPRY+T
Sbjct: 424 KTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMVGQDIKPRYLT 483
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
C+LLLDEVKQKNMDE A+RIED+MKKL
Sbjct: 484 CKLLLDEVKQKNMDEVAERIEDIMKKL 510
BLAST of Sed0028237 vs. NCBI nr
Match:
XP_023541614.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67
Identity = 127/147 (86.39%), Postives = 136/147 (92.52%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYCHR QE KAM+LLEEMEKSG+C+PDVQTYY LLKSCFRT
Sbjct: 364 MPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQTYYPLLKSCFRTG 423
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TDNVL KLLDDM+NK HLSLDI TYSLLIHGLCR+NKCEWAYQLF MIGQDIKPRY+T
Sbjct: 424 KTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRSNKCEWAYQLFETMIGQDIKPRYLT 483
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
C+LLLDEVKQKNMDE A+RIED+MKKL
Sbjct: 484 CKLLLDEVKQKNMDEVAERIEDIMKKL 510
BLAST of Sed0028237 vs. NCBI nr
Match:
XP_022944939.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita moschata] >XP_022944940.1 pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita moschata])
HSP 1 Score: 265.0 bits (676), Expect = 3.8e-67
Identity = 128/147 (87.07%), Postives = 135/147 (91.84%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYCHR QE KAM+LL EMEKSG+C+PDVQTYY LLKSCFRT
Sbjct: 364 MPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLGEMEKSGLCKPDVQTYYPLLKSCFRTG 423
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TDNVL KLLDDMINK HLSLDI TYSLLIHGLCRANKCEWAYQLF MIGQDIKPRY+T
Sbjct: 424 KTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPRYLT 483
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
C+LLLDEVKQKNMDE A+RIED+MKKL
Sbjct: 484 CKLLLDEVKQKNMDEVAERIEDIMKKL 510
BLAST of Sed0028237 vs. NCBI nr
Match:
KAG7012750.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 127/147 (86.39%), Postives = 134/147 (91.16%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYCHR QE AM+LLEEMEKSG+C+PDVQTYY LLKSCFRT
Sbjct: 364 MPSKSVLPNTSTYNSMISMYCHRAQEQNAMKLLEEMEKSGLCKPDVQTYYPLLKSCFRTG 423
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TDNVL KLLDDMINK HLSLDI TYSLLIHGLCRANKCEWAYQLF MIGQDIKPRY+T
Sbjct: 424 KTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPRYLT 483
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
C+LLLDEVKQKNMDE +RIED+MKKL
Sbjct: 484 CKLLLDEVKQKNMDEVGERIEDIMKKL 510
BLAST of Sed0028237 vs. NCBI nr
Match:
KAG6573665.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 127/147 (86.39%), Postives = 134/147 (91.16%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYCHR QE AM+LLEEMEKSG+C+PDVQTYY LLKSCFRT
Sbjct: 364 MPSKSVLPNTSTYNSMISMYCHRAQEQNAMKLLEEMEKSGLCKPDVQTYYPLLKSCFRTG 423
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TDNVL KLLDDMINK HLSLDI TYSLLIHGLCRANKCEWAYQLF MIGQDIKPRY+T
Sbjct: 424 KTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPRYLT 483
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
C+LLLDEVKQKNMDE +RIED+MKKL
Sbjct: 484 CKLLLDEVKQKNMDEVGERIEDIMKKL 510
BLAST of Sed0028237 vs. ExPASy Swiss-Prot
Match:
Q9M8W9 (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2)
HSP 1 Score: 179.5 bits (454), Expect = 2.8e-44
Identity = 90/145 (62.07%), Postives = 107/145 (73.79%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MP V NTSTYNSMI+MYCH +E KA+ELL+EME S +C PDV TY LL+SCF+
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
+ V KLL +M+ KHHLSLD TY+ LI LCRAN CEWAY LF +MI QDI PR+ T
Sbjct: 416 DVVEV-GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 475
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMK 146
C LLL+EVK+KNM E A+RIE +MK
Sbjct: 476 CLLLLEEVKKKNMHESAERIEHIMK 499
BLAST of Sed0028237 vs. ExPASy Swiss-Prot
Match:
Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 2.9e-17
Identity = 53/147 (36.05%), Postives = 87/147 (59.18%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEM--EKSGICEPDVQTYYSLLKSCFR 60
M ++ V + YN+MIS H ++ A+ LL+ M E+ C P+V+TY LLK C
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCH 463
Query: 61 TENTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRY 120
+ +L LL M+ K+ +S+D+ TY LLI GLC + K E A F + + + + PR
Sbjct: 464 KKKM-KLLGILLHHMV-KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRD 523
Query: 121 ITCQLLLDEVKQKNMDEFADRIEDVMK 146
TC++L+DE+++KNM E +I+ +++
Sbjct: 524 STCKMLVDELEKKNMAEAKLKIQSLVQ 548
BLAST of Sed0028237 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 3.3e-13
Identity = 44/144 (30.56%), Postives = 78/144 (54.17%), Query Frame = 0
Query: 3 SKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTENT 62
SK ++PNT TYN+++ +C G+ + A EL +EM G+ P V TY LL
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGEL 472
Query: 63 DNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYITCQ 122
+ L + + + K ++L I Y+++IHG+C A+K + A+ LF + + +KP +T
Sbjct: 473 NKALE--IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 532
Query: 123 LLLDEVKQKNMDEFADRIEDVMKK 147
+++ + +K AD + MK+
Sbjct: 533 VMIGGLCKKGSLSEADMLFRKMKE 553
BLAST of Sed0028237 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 8.2e-12
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
+ SK +LP+ T+NS+I C AMEL EEM G CEPD TY L+ S
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKG 450
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
D L L + + + TY+ LI G C+ANK A ++F +M + +T
Sbjct: 451 KLDEALNML--KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 510
Query: 121 CQLLLDEVKQKNMDEFADRIEDVM 145
L+D + + E A ++ D M
Sbjct: 511 YNTLIDGLCKSRRVEDAAQLMDQM 531
BLAST of Sed0028237 vs. ExPASy Swiss-Prot
Match:
P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 41/146 (28.08%), Postives = 81/146 (55.48%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
M ++ + PN TYN+++ YC + + +A +L+ M ++ C PD+ T+ SL+K +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVK 383
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
D+ ++ + I+K L + TYS+L+ G C++ K + A +LF +M+ + P +T
Sbjct: 384 RVDDGMKVFRN--ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 443
Query: 121 CQLLLDEV-KQKNMDEFADRIEDVMK 146
+LLD + +++ + ED+ K
Sbjct: 444 YGILLDGLCDNGKLEKALEIFEDLQK 466
BLAST of Sed0028237 vs. ExPASy TrEMBL
Match:
A0A6J1HQ84 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111466381 PE=4 SV=1)
HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 128/147 (87.07%), Postives = 137/147 (93.20%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYCHR QE KAM+LLEEMEKSG+C+PDVQTYY LLKSCFRT
Sbjct: 364 MPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQTYYPLLKSCFRTG 423
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TDNVL KLLDDM+NK HLSLDI TYSLLIHGLCRANKCEWAYQLF KM+GQDIKPRY+T
Sbjct: 424 KTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMVGQDIKPRYLT 483
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
C+LLLDEVKQKNMDE A+RIED+MKKL
Sbjct: 484 CKLLLDEVKQKNMDEVAERIEDIMKKL 510
BLAST of Sed0028237 vs. ExPASy TrEMBL
Match:
A0A6J1FZG9 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449323 PE=4 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 128/147 (87.07%), Postives = 135/147 (91.84%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYCHR QE KAM+LL EMEKSG+C+PDVQTYY LLKSCFRT
Sbjct: 364 MPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLGEMEKSGLCKPDVQTYYPLLKSCFRTG 423
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TDNVL KLLDDMINK HLSLDI TYSLLIHGLCRANKCEWAYQLF MIGQDIKPRY+T
Sbjct: 424 KTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPRYLT 483
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
C+LLLDEVKQKNMDE A+RIED+MKKL
Sbjct: 484 CKLLLDEVKQKNMDEVAERIEDIMKKL 510
BLAST of Sed0028237 vs. ExPASy TrEMBL
Match:
A0A6J1DD08 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111019649 PE=3 SV=1)
HSP 1 Score: 254.6 bits (649), Expect = 2.5e-64
Identity = 120/147 (81.63%), Postives = 133/147 (90.48%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSK VLPNTSTYNSMISMYCH +E KAM+L++EME SG+C+PDVQTYY LLKSCFRT
Sbjct: 346 MPSKGVLPNTSTYNSMISMYCHGAREEKAMKLVKEMENSGVCKPDVQTYYPLLKSCFRTG 405
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
T+ +L KLLD+M+NKHHLSLDI TYSLLIHGLCRANKCEWAYQLF KMIGQDIKPRY+T
Sbjct: 406 KTEYILSKLLDEMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMIGQDIKPRYLT 465
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
CQLLLDEVKQKNMDE ADRIE ++KKL
Sbjct: 466 CQLLLDEVKQKNMDEVADRIEGILKKL 492
BLAST of Sed0028237 vs. ExPASy TrEMBL
Match:
A0A1S3BE82 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488914 PE=4 SV=1)
HSP 1 Score: 247.3 bits (630), Expect = 4.0e-62
Identity = 120/147 (81.63%), Postives = 128/147 (87.07%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYC R +E KA +LLEEMEKSG C+PDVQTYY LLKSCFR
Sbjct: 371 MPSKSVLPNTSTYNSMISMYCRRAREEKARKLLEEMEKSGYCKPDVQTYYPLLKSCFRNG 430
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TD L LLD+M NKHHLSLDI TYSLLIHGLCRANKC+WAYQLF KMI QDIKPRY+T
Sbjct: 431 KTDYDLSNLLDEMTNKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLT 490
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
CQLLLDEVKQKNMD+ ADRIE +MKKL
Sbjct: 491 CQLLLDEVKQKNMDKVADRIEGIMKKL 517
BLAST of Sed0028237 vs. ExPASy TrEMBL
Match:
A0A5A7SWG7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002030 PE=4 SV=1)
HSP 1 Score: 247.3 bits (630), Expect = 4.0e-62
Identity = 120/147 (81.63%), Postives = 128/147 (87.07%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MPSKSVLPNTSTYNSMISMYC R +E KA +LLEEMEKSG C+PDVQTYY LLKSCFR
Sbjct: 371 MPSKSVLPNTSTYNSMISMYCRRAREEKARKLLEEMEKSGYCKPDVQTYYPLLKSCFRNG 430
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
TD L LLD+M NKHHLSLDI TYSLLIHGLCRANKC+WAYQLF KMI QDIKPRY+T
Sbjct: 431 KTDYDLSNLLDEMTNKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLT 490
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMKKL 148
CQLLLDEVKQKNMD+ ADRIE +MKKL
Sbjct: 491 CQLLLDEVKQKNMDKVADRIEGIMKKL 517
BLAST of Sed0028237 vs. TAIR 10
Match:
AT3G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 179.5 bits (454), Expect = 2.0e-45
Identity = 90/145 (62.07%), Postives = 107/145 (73.79%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MP V NTSTYNSMI+MYCH +E KA+ELL+EME S +C PDV TY LL+SCF+
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
+ V KLL +M+ KHHLSLD TY+ LI LCRAN CEWAY LF +MI QDI PR+ T
Sbjct: 416 DVVEV-GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 475
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMK 146
C LLL+EVK+KNM E A+RIE +MK
Sbjct: 476 CLLLLEEVKKKNMHESAERIEHIMK 499
BLAST of Sed0028237 vs. TAIR 10
Match:
AT3G04130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 179.5 bits (454), Expect = 2.0e-45
Identity = 90/145 (62.07%), Postives = 107/145 (73.79%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
MP V NTSTYNSMI+MYCH +E KA+ELL+EME S +C PDV TY LL+SCF+
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
+ V KLL +M+ KHHLSLD TY+ LI LCRAN CEWAY LF +MI QDI PR+ T
Sbjct: 416 DVVEV-GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 475
Query: 121 CQLLLDEVKQKNMDEFADRIEDVMK 146
C LLL+EVK+KNM E A+RIE +MK
Sbjct: 476 CLLLLEEVKKKNMHESAERIEHIMK 499
BLAST of Sed0028237 vs. TAIR 10
Match:
AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 53/147 (36.05%), Postives = 87/147 (59.18%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEM--EKSGICEPDVQTYYSLLKSCFR 60
M ++ V + YN+MIS H ++ A+ LL+ M E+ C P+V+TY LLK C
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCH 463
Query: 61 TENTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRY 120
+ +L LL M+ K+ +S+D+ TY LLI GLC + K E A F + + + + PR
Sbjct: 464 KKKM-KLLGILLHHMV-KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRD 523
Query: 121 ITCQLLLDEVKQKNMDEFADRIEDVMK 146
TC++L+DE+++KNM E +I+ +++
Sbjct: 524 STCKMLVDELEKKNMAEAKLKIQSLVQ 548
BLAST of Sed0028237 vs. TAIR 10
Match:
AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 76.3 bits (186), Expect = 2.4e-14
Identity = 44/144 (30.56%), Postives = 78/144 (54.17%), Query Frame = 0
Query: 3 SKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTENT 62
SK ++PNT TYN+++ +C G+ + A EL +EM G+ P V TY LL
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGEL 472
Query: 63 DNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYITCQ 122
+ L + + + K ++L I Y+++IHG+C A+K + A+ LF + + +KP +T
Sbjct: 473 NKALE--IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 532
Query: 123 LLLDEVKQKNMDEFADRIEDVMKK 147
+++ + +K AD + MK+
Sbjct: 533 VMIGGLCKKGSLSEADMLFRKMKE 553
BLAST of Sed0028237 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 71.6 bits (174), Expect = 5.8e-13
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 0
Query: 1 MPSKSVLPNTSTYNSMISMYCHRGQEHKAMELLEEMEKSGICEPDVQTYYSLLKSCFRTE 60
+ SK +LP+ T+NS+I C AMEL EEM G CEPD TY L+ S
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKG 450
Query: 61 NTDNVLRKLLDDMINKHHLSLDICTYSLLIHGLCRANKCEWAYQLFVKMIGQDIKPRYIT 120
D L L + + + TY+ LI G C+ANK A ++F +M + +T
Sbjct: 451 KLDEALNML--KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 510
Query: 121 CQLLLDEVKQKNMDEFADRIEDVM 145
L+D + + E A ++ D M
Sbjct: 511 YNTLIDGLCKSRRVEDAAQLMDQM 531
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022966771.1 | 3.5e-68 | 87.07 | pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucur... | [more] |
XP_023541614.1 | 2.9e-67 | 86.39 | pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucur... | [more] |
XP_022944939.1 | 3.8e-67 | 87.07 | pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita ... | [more] |
KAG7012750.1 | 6.6e-67 | 86.39 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG6573665.1 | 6.6e-67 | 86.39 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9M8W9 | 2.8e-44 | 62.07 | Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidop... | [more] |
Q9LUJ4 | 2.9e-17 | 36.05 | Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... | [more] |
Q6NQ83 | 3.3e-13 | 30.56 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Q9LFF1 | 8.2e-12 | 32.64 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
P0C7Q7 | 1.1e-11 | 28.08 | Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HQ84 | 1.7e-68 | 87.07 | pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like OS=Cuc... | [more] |
A0A6J1FZG9 | 1.9e-67 | 87.07 | pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucurbit... | [more] |
A0A6J1DD08 | 2.5e-64 | 81.63 | pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like OS=Mom... | [more] |
A0A1S3BE82 | 4.0e-62 | 81.63 | pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucumis ... | [more] |
A0A5A7SWG7 | 4.0e-62 | 81.63 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT3G04130.1 | 2.0e-45 | 62.07 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G04130.2 | 2.0e-45 | 62.07 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22670.1 | 2.1e-18 | 36.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22470.1 | 2.4e-14 | 30.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 5.8e-13 | 32.64 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |