Sed0028210 (gene) Chayote v1

Overview


Name	Sed0028210
Type	gene
Organism	Sechium edule (Chayote v1)
Description	nuclear transport factor 2
Location	LG06: 13804876 .. 13806983 (-)
RNA-Seq Expression	Sed0028210
Synteny	Sed0028210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGATCAGACTGATATTGTAGGGAAGGCGTTTGTGGAACATTACTACCAATTGTTCGACAACGAAAGAGCCTCTGTTTCTTCTTTGTACCAACCCGACTCCATGCTCACTTTCGAAGGCCAGCAAATCTTAGGCGCTGACGACGTCTCTACTAAGTTTTAGCAATTGCCCTTTGAACGTTGCCGACATGTCGTCAACACCATCAATGTGCAGCCCTCCGTCACCCCCGCCTCCCTCCTCATCTTCGTCAGCGGTAGCCTTGAGCTTCCCGACGAAGAACACCCCTTGAGATTCAGTCAAATTATCTTTCTTTCTTTTTTAGTTTCCAACCTGTAATCTTTTGTTCAATAAATTTGAATATATATATATATATATATATAGTCCAGACTATATTTCTTTTGACCAGTGAAGTTCCTTTTTATGTTCAATGTATAAAGATCAAAACTTGGGTACTTCATCCAAAGTACATAATACATACTTCACATCATTTATGAGGATAATAGTGCACGAGCATGTTTAATATATCATTTATTTTTTATTACTCAAATCATTATTTTTTTTTAATATAATTTGTAATTCATTTTTTATATACTTACGTTATTATGTGAGATGTTATTATCCTCACAAATGGTAATAAGTATGTCAGAATACTTTCTAAAAATATATCCAAATTTTGTTTATATATGAATAAGATCTTTTGTTTGCATTAATATATAGATTTTCTTTTTTGTTTTTAAATTTTTTTTCTTGTGGTCTAAAAAGAATTGCATTTAAAGGGGTGTTGCCTTGGCTCCGATCAACTAAAATTGATAGATATCAAATTTGAAATTGATAAAGTTCAAATTAAATTTGAAATATTTTATTATGTAGAAATATTTTTAAGAAATTAATTTCAAAATATAAATGTTAGAATTTTCTATGTGCAATAATCTTTTAAAAAATATTTGTGATCCATTAAAAATGTTGAAAAAAAAATTTTTATTATTAATATTTATCCTGCTCAAATCAGACGGAAATAACAAAATATCCCACATTCAATAAGTAATAATTATAAATAAAAAAAAAATGCCCTTATGGGTAACATACCAAAATATCCTTATATAATGAGTTTTAAAAAACGCAAAAAGTAACTTTAAATAAATATCACTTCAAATTAGTCTCAAACATAGGGCTTTAAAATTGTTGGGGGCCAATACCACAAGAGAAAATGAATTTTGGGAAGGGAACAAAAATAAATTTTATTTTTGAAAGGAGAGAAAAGAAAAGACATGAAAAAATTGGTTTTTTTTTTAAAGTCTTACCCCGACGTTTTTTACCGTCGGCTTAAACTATCTTTTCCGACGTTTAACGCCTACCGTCGCAGTTAATAAAGTTACTCTGAGGCGTCTGTTTGATACCGTCACCATAAATATATTTTTCCTACTTTCGCGACGTTTAAAGAAAACGTTGGCAAAATTAATTTACACCGACGGTATAAAAACGTCGGCGAAAATTTCGTCGCCTTCGATAGTTTTTGTTGTAGTGGTACACTCTCGTGACTTTATTTTTTTTTCACCCAAAAAATCTCATATTAAAAGAGATGATTGTCATCATTTATATACCCAATGTCTTCCCTTCATTTTGTTTCCATCCCAATAAATCGTAAATCAGTTTTTTTTTTTTAAAAAAATTTTGTTATTATTATTATTGTTGTACTGATACCAACTATTTAATTAATACCAAATGGGTTAGTTGGTGAAATGACCATTATTTCGTTGTAAACAAGTCCAACATCAACATCGCAGATTTGATCTCGAGAATTGGTATTTGTCTCTCTATCCCAATATGTACTAAAAAAAGAAACTATTTAATTAATTAAACCAAAATGGTTTCACAGAACTAGCCACCTCGTTCTTAACTTCAGATGCTTTTTCATCCTAAACATGAAGTAATGCCAAAAAGCGCGAAATTTTCTTCTCCCATATTAAATCAGCCTCGTCAACTTAAACCCGCACACATTAGTCTTGCTTTACATTAATAGACTTCTTTATAAATAGAAAAGTGATAAACAAGAAAATGACATTGACTTCAAAATACACTACTACAAAAAACAGTATAGTTGA

mRNA sequence

ATGGAAGAAGATCAGACTGATATTGTAGGGAAGGCGTTTGTGGAACATTACTACCAATTGTTCGACAACGAAAGAGCCTCTGTTTCTTCTTTGTACCAACCCGACTCCATGCTCACTTTCGAAGGCCAGCAAATCTTAGGCGCTGACGACGTCTCTACTAAGTTTTATGATAAACAAGAAAATGACATTGACTTCAAAATACACTACTACAAAAAACAGTATAGTTGA

Coding sequence (CDS)

ATGGAAGAAGATCAGACTGATATTGTAGGGAAGGCGTTTGTGGAACATTACTACCAATTGTTCGACAACGAAAGAGCCTCTGTTTCTTCTTTGTACCAACCCGACTCCATGCTCACTTTCGAAGGCCAGCAAATCTTAGGCGCTGACGACGTCTCTACTAAGTTTTATGATAAACAAGAAAATGACATTGACTTCAAAATACACTACTACAAAAAACAGTATAGTTGA

Protein sequence

MEEDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTKFYDKQENDIDFKIHYYKKQYS

Homology

[Close]

BLAST of Sed0028210 vs. NCBI nr
Match: KAA0056878.1 (nuclear transport factor 2 [Cucumis melo var. makuwa] >TYJ99381.1 nuclear transport factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-17
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MEEDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          MEE+Q DI+GKAFVEHYY LFDNERAS+SSLYQPDSMLTFEGQQILG +D+STK
Sbjct: 1  MEEEQGDIIGKAFVEHYYHLFDNERASLSSLYQPDSMLTFEGQQILGVNDISTK 54

[Close]

BLAST of Sed0028210 vs. NCBI nr
Match: XP_008441397.1 (PREDICTED: nuclear transport factor 2 [Cucumis melo])

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-17
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MEEDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          MEE+Q DI+GKAFVEHYY LFDNERAS+SSLYQPDSMLTFEGQQILG +D+STK
Sbjct: 1  MEEEQGDIIGKAFVEHYYHLFDNERASLSSLYQPDSMLTFEGQQILGVNDISTK 54

[Close]

BLAST of Sed0028210 vs. NCBI nr
Match: XP_038895004.1 (nuclear transport factor 2B [Benincasa hispida])

HSP 1 Score: 97.1 bits (240), Expect = 7.1e-17
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 3  EDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          E++ DI+GKAFVEHYYQLFDNERAS+SSLYQPDSMLTFEGQQILG DD+S+K
Sbjct: 2  EEEADIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVDDISSK 53

[Close]

BLAST of Sed0028210 vs. NCBI nr
Match: XP_023519037.1 (nuclear transport factor 2B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-16
Identity = 43/52 (82.69%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 3  EDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          E++TDIVGKAFVEHYYQLFDNER S+S+LYQPDSMLTFEGQQILG DD+S++
Sbjct: 2  EEETDIVGKAFVEHYYQLFDNERPSLSTLYQPDSMLTFEGQQILGVDDISSR 53

[Close]

BLAST of Sed0028210 vs. NCBI nr
Match: XP_004153658.1 (nuclear transport factor 2B [Cucumis sativus] >KGN64547.1 hypothetical protein Csa_013836 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 7.8e-16
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 0


Query: 3  EDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          E++ DI+GKAFVEHYYQLFDNERAS+SSLYQPDSMLTFEGQQILG  D+S+K
Sbjct: 2  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSK 53

[Close]

BLAST of Sed0028210 vs. ExPASy Swiss-Prot
Match: Q9XJ54 (Nuclear transport factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NTF2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-09
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 7  DIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          D V KAFVEHYY+ FD  R ++ SLYQ  SMLTFEGQQ LGA  ++ K
Sbjct: 4  DAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGK 51

[Close]

BLAST of Sed0028210 vs. ExPASy Swiss-Prot
Match: Q9C7F5 (Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-08
Identity = 28/54 (51.85%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 1  MEEDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          M +   D V KAFVEHYY  FD  R  ++ LYQ  SMLTFEGQ+I G   +  K
Sbjct: 1  MSQMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAK 54

[Close]

BLAST of Sed0028210 vs. ExPASy Swiss-Prot
Match: Q9FZK4 (Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.1e-08
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 7  DIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          D V KAFVEHYY  FD  R  + SLYQ  SMLTFEGQ+I G+ ++  K
Sbjct: 4  DAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAK 51

[Close]

BLAST of Sed0028210 vs. ExPASy Swiss-Prot
Match: Q86HW7 (Nuclear transport factor 2 OS=Dictyostelium discoideum OX=44689 GN=nutf2 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.6e-06
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 9  VGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDV 52
          VGK FVEHYY +FD+ RA ++ +YQ  + LT+EG+ + GAD +
Sbjct: 11 VGKQFVEHYYGIFDSNRAGLTQIYQQQTTLTWEGKFLSGADAI 53

[Close]

BLAST of Sed0028210 vs. ExPASy Swiss-Prot
Match: P87102 (Nuclear transport factor 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ntf2 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.4e-06
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 9  VGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          +   FV HYY  FD++R +++ LY+ +SMLTFEG Q LGA  ++ K
Sbjct: 8  IATQFVAHYYSTFDSDRKNLAGLYRDNSMLTFEGAQSLGAQGITEK 53

[Close]

BLAST of Sed0028210 vs. ExPASy TrEMBL
Match: A0A5D3BKX8 (Nuclear transport factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005990 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.0e-18
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MEEDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          MEE+Q DI+GKAFVEHYY LFDNERAS+SSLYQPDSMLTFEGQQILG +D+STK
Sbjct: 1  MEEEQGDIIGKAFVEHYYHLFDNERASLSSLYQPDSMLTFEGQQILGVNDISTK 54

[Close]

BLAST of Sed0028210 vs. ExPASy TrEMBL
Match: A0A1S3B3B7 (nuclear transport factor 2 OS=Cucumis melo OX=3656 GN=LOC103485524 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.0e-18
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MEEDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          MEE+Q DI+GKAFVEHYY LFDNERAS+SSLYQPDSMLTFEGQQILG +D+STK
Sbjct: 1  MEEEQGDIIGKAFVEHYYHLFDNERASLSSLYQPDSMLTFEGQQILGVNDISTK 54

[Close]

BLAST of Sed0028210 vs. ExPASy TrEMBL
Match: A0A0A0LUU9 (NTF2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064690 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.8e-16
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 0


Query: 3  EDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          E++ DI+GKAFVEHYYQLFDNERAS+SSLYQPDSMLTFEGQQILG  D+S+K
Sbjct: 2  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSK 53

[Close]

BLAST of Sed0028210 vs. ExPASy TrEMBL
Match: A0A6J1F427 (nuclear transport factor 2B OS=Cucurbita moschata OX=3662 GN=LOC111440050 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.9e-16
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 0


Query: 3  EDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          E++ DIVGKAFVEHYYQLFDNER S+S+LYQPDSMLTFEGQQILG DD+S++
Sbjct: 2  EEEADIVGKAFVEHYYQLFDNERPSLSTLYQPDSMLTFEGQQILGVDDISSR 53

[Close]

BLAST of Sed0028210 vs. ExPASy TrEMBL
Match: A0A6J1CEC9 (nuclear transport factor 2 OS=Momordica charantia OX=3673 GN=LOC111010728 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.5e-15
Identity = 40/52 (76.92%), Postives = 51/52 (98.08%), Query Frame = 0


Query: 3  EDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          E+++++VG+AFVEHYYQLFDNERASVSSLYQP+SMLTFEGQ+ILG DD+S++
Sbjct: 2  EEESEMVGRAFVEHYYQLFDNERASVSSLYQPESMLTFEGQKILGVDDISSR 53

[Close]

BLAST of Sed0028210 vs. TAIR 10
Match: AT1G11570.1 (NTF2-like )

HSP 1 Score: 67.8 bits (164), Expect = 4.3e-12
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 9  VGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          V  AFV HYY LFDN+R+S+SSLY P S+LTFEGQ I G D++S K
Sbjct: 12 VASAFVNHYYHLFDNDRSSLSSLYNPTSLLTFEGQTIYGVDNISNK 57

[Close]

BLAST of Sed0028210 vs. TAIR 10
Match: AT1G11570.2 (NTF2-like )

HSP 1 Score: 67.8 bits (164), Expect = 4.3e-12
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 9  VGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          V  AFV HYY LFDN+R+S+SSLY P S+LTFEGQ I G D++S K
Sbjct: 12 VASAFVNHYYHLFDNDRSSLSSLYNPTSLLTFEGQTIYGVDNISNK 57

[Close]

BLAST of Sed0028210 vs. TAIR 10
Match: AT1G27970.1 (nuclear transport factor 2B )

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-09
Identity = 28/54 (51.85%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 1  MEEDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          M +   D V KAFVEHYY  FD  R  ++ LYQ  SMLTFEGQ+I G   +  K
Sbjct: 1  MSQMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAK 54

[Close]

BLAST of Sed0028210 vs. TAIR 10
Match: AT1G27970.2 (nuclear transport factor 2B )

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-09
Identity = 28/54 (51.85%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 1  MEEDQTDIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          M +   D V KAFVEHYY  FD  R  ++ LYQ  SMLTFEGQ+I G   +  K
Sbjct: 1  MSQMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAK 54

[Close]

BLAST of Sed0028210 vs. TAIR 10
Match: AT1G27310.1 (nuclear transport factor 2A )

HSP 1 Score: 59.3 bits (142), Expect = 1.5e-09
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 7  DIVGKAFVEHYYQLFDNERASVSSLYQPDSMLTFEGQQILGADDVSTK 55
          D V KAFVEHYY  FD  R  + SLYQ  SMLTFEGQ+I G+ ++  K
Sbjct: 4  DAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAK 51

The following BLAST results are available for this feature:

BLAST of Sed0028210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056878.1	1.9e-17	85.19	nuclear transport factor 2 [Cucumis melo var. makuwa] >TYJ99381.1 nuclear transp...	[more]
XP_008441397.1	1.9e-17	85.19	PREDICTED: nuclear transport factor 2 [Cucumis melo]	[more]
XP_038895004.1	7.1e-17	84.62	nuclear transport factor 2B [Benincasa hispida]	[more]
XP_023519037.1	2.7e-16	82.69	nuclear transport factor 2B [Cucurbita pepo subsp. pepo]	[more]
XP_004153658.1	7.8e-16	82.69	nuclear transport factor 2B [Cucumis sativus] >KGN64547.1 hypothetical protein C...	[more]

BLAST of Sed0028210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ54	1.9e-09	62.50	Nuclear transport factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NTF2 PE=2...	[more]
Q9C7F5	1.6e-08	51.85	Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1	[more]
Q9FZK4	2.1e-08	58.33	Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1	[more]
Q86HW7	2.6e-06	51.16	Nuclear transport factor 2 OS=Dictyostelium discoideum OX=44689 GN=nutf2 PE=1 SV...	[more]
P87102	3.4e-06	47.83	Nuclear transport factor 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A ...	[more]

BLAST of Sed0028210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKX8	9.0e-18	85.19	Nuclear transport factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B3B7	9.0e-18	85.19	nuclear transport factor 2 OS=Cucumis melo OX=3656 GN=LOC103485524 PE=4 SV=1	[more]
A0A0A0LUU9	3.8e-16	82.69	NTF2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064690 PE=4 S...	[more]
A0A6J1F427	4.9e-16	80.77	nuclear transport factor 2B OS=Cucurbita moschata OX=3662 GN=LOC111440050 PE=4 S...	[more]
A0A6J1CEC9	2.5e-15	76.92	nuclear transport factor 2 OS=Momordica charantia OX=3673 GN=LOC111010728 PE=4 S...	[more]

BLAST of Sed0028210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11570.1	4.3e-12	65.22	NTF2-like	[more]
AT1G11570.2	4.3e-12	65.22	NTF2-like	[more]
AT1G27970.1	1.2e-09	51.85	nuclear transport factor 2B	[more]
AT1G27970.2	1.2e-09	51.85	nuclear transport factor 2B	[more]
AT1G27310.1	1.5e-09	58.33	nuclear transport factor 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002075	Nuclear transport factor 2	PFAM	PF02136	NTF2	coord: 9..71 e-value: 2.3E-12 score: 47.6
None	No IPR available	GENE3D	3.10.450.50		coord: 1..75 e-value: 6.1E-15 score: 57.4
None	No IPR available	PANTHER	PTHR12612	NUCLEAR TRANSPORT FACTOR 2	coord: 4..57
None	No IPR available	PANTHER	PTHR12612:SF29	NTF2-LIKE PROTEIN	coord: 4..57
IPR018222	Nuclear transport factor 2, eukaryote	PROSITE	PS50177	NTF2_DOMAIN	coord: 9..75 score: 13.22504
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 6..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028210.1	Sed0028210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0044613	nuclear pore central transport channel