Sed0028181 (gene) Chayote v1

Overview


Name	Sed0028181
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DUF1279 domain-containing protein
Location	LG01: 58595882 .. 58598216 (+)
RNA-Seq Expression	Sed0028181
Synteny	Sed0028181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGTTGAAGGACCGAATACTAAATATAGGTAACATTTTCCACTTTTGAACTGTGTGAAGAAAAATTGATAATCGTTGAAGCAAATTTCTGGCTTTATAACGCTTCGGATAAAACTCTGTGGGTTCCGAATTCCGATAATGGCAACGGCCGTCTCTGTAATTTGCTTTTCAACAACTTCTTTGTTTAGTGATGGAAATTTGAGGTTTCAGTTGAAATTTCGTAACCGACCCACAAAATTGAATTCCAAACAATTGAGGGTTGAAGCCCTTAAAGAGAAAACAGGCGAAATCGAAGGCCCATCTCAAGCAGATGAAGTCACCCAAAAGTATGGACTTGAAGCCGGCCTCTGGAAGGTACCCTTTTCTTCTCTTCTCTTCCTTTTATGGTTTTTAATAGCAATATGTCTGTGGCAAAACAGTCATATGTTTATGTGTTGTTTCGATTGTTCATATTTCCTATGGTTCTGTCATGGTTTCCAATTATATCACCACTTGAATTTCCAATGCCTGCCCTTGGAAGGAAGACCATCTGAAGAAGAAGCTTCTACTTTCAATTTAGGTGCTCTCTGTTAAGTTCCTCTCTTCACAATTTGATGAAACAAGTGAAGAAAGAAGAAAGCAAATTAAATCAATTTTCAATATTTGATTCCTTAAGGCTTTGAGACTGAGATTGTTTCTTTCTCCTTATCTCTTTGCTGGGAATAGGAATAATGCAAACTCTTGTTTGCTTATTGGGTTGGGAGTGTTTAGGGTTAGAAGAATGAGAATGAGAATAATTCAGTTACTCACGTTTGTCTACTAGAAATAATTCTCCTCATAATTAGTCTCCAAGGGCTGGCACAGTGGTTGAAGACTTGGGCTTTGAGGTATGCTCCCTTCAAGGTCTCGAGTTCGAGACTCACCAGTGACATTACTCCTTCGATGTCTCCAGTGCCTGACTTAGGAACGGGCGTGGTTACCTTGTTTCAAAAAAAATAATCCTCCTCATAATTACTATTTATTCTCTTCCATAATCTCATTTTTGCATGACCACTTTTCATTCTATCCATAACTACTATAACTAACTACTTCTCGTTCTATTTCTCTCCATATTTACTATTTTGTTTTGTGACCATATTCATCTCCCTATAATTATTCTCTATATCTCAAGTATAGATAATCATTCTCTCATAATTATTTGTTGCACCACAAACATAGAGTAAAGAAAATAGAAGAAGAAACCTGAAAGATAAGAAGACAACGAAAAACAAATGGGAAACTTCCCCTCTATTATATTAGATTGGCATTTGGCTTGATGATTATCATAGTGAGTTCTACCTCTATTTATAGGAGGAAAACTAAACTTACAAGAGTAGAGTAGCCAAACACCAAGTAGAAATGATTGATACTAACTAAAGTGAAAGCAAAAGATACAAATTATCTAAAATAGTAGAAATGATAGGTAAAGGATTTGTCAATGACAAAAGCAAGTCTTAACACATAGATGATCATTTCTCATAAAATTCTCTGTGCCCCCAAACGTAGATAATCATTTCTCCATAATCATTATCTTCACTTCAAACACAGATAATCATTCTTCTCAATAATCATTATCCACTATATTCTCCTCCCCTATAACCATTCTCATTCTTCTCAATAATCTTTTTCTATAACCATTCTCATTCTTCTTGTCCCGTACATGTAATTTTTGAAACGAAATGAGAAATTCATGTTAGTTATGCAGATATTTAGCTCAAAGGAGGAGGGTGAAGAAGGTGAAGGGAAAAACAAATCAAAGGGTGATCAGGCAAAAGAGCTGTTAGCTAAATATGGAGGTGCATATTTAGCGACCTCCATAACTCTGTCCCTGATCTCTTTCTCTCTGTGTTATGCGCTGATCAGCTCCGGTGTCGATGTTCAAGCTCTTCTACAGAAGGTAATGACATTCAGGAACGGTTCGATAAGTTAATTCATTCAATCAAAATTATGGAGAAAATCTTAGTGTTTGACACTTGAAAACTCTCAGGTAGGAATTTCAACGGATGAGACTGGAGAGAAAGTAGGAACCTTTGCTTTGGCTTATGCTGCCCATAAAGCTGCTTCTCCAATAAGGTTTCCTCCAACAGTGGCCCTAACTCCAATAGTTGCAAGTTGGATTGGGAAGAAAGTTGATCAAGAGAAATAGCATAGTGCTTGCCCCTTCACAGTTCATAATATTACTTTACATACTTGTTTTGTTTTTATTAAAAGTATTCCACAGTTGATGTTGGGTTGAATCTCATATTGATACATAATAATGATATATAAAGTATCCATCCTTTGGAATCATAGCTAATGATTCCCGCTTTCAGCAA

mRNA sequence

GAAAAGTTGAAGGACCGAATACTAAATATAGGTAACATTTTCCACTTTTGAACTGTGTGAAGAAAAATTGATAATCGTTGAAGCAAATTTCTGGCTTTATAACGCTTCGGATAAAACTCTGTGGGTTCCGAATTCCGATAATGGCAACGGCCGTCTCTGTAATTTGCTTTTCAACAACTTCTTTGTTTAGTGATGGAAATTTGAGGTTTCAGTTGAAATTTCGTAACCGACCCACAAAATTGAATTCCAAACAATTGAGGGTTGAAGCCCTTAAAGAGAAAACAGGCGAAATCGAAGGCCCATCTCAAGCAGATGAAGTCACCCAAAAGTATGGACTTGAAGCCGGCCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGAAGGTGAAGGGAAAAACAAATCAAAGGGTGATCAGGCAAAAGAGCTGTTAGCTAAATATGGAGGTGCATATTTAGCGACCTCCATAACTCTGTCCCTGATCTCTTTCTCTCTGTGTTATGCGCTGATCAGCTCCGGTGTCGATGTTCAAGCTCTTCTACAGAAGGTAGGAATTTCAACGGATGAGACTGGAGAGAAAGTAGGAACCTTTGCTTTGGCTTATGCTGCCCATAAAGCTGCTTCTCCAATAAGGTTTCCTCCAACAGTGGCCCTAACTCCAATAGTTGCAAGTTGGATTGGGAAGAAAGTTGATCAAGAGAAATAGCATAGTGCTTGCCCCTTCACAGTTCATAATATTACTTTACATACTTGTTTTGTTTTTATTAAAAGTATTCCACAGTTGATGTTGGGTTGAATCTCATATTGATACATAATAATGATATATAAAGTATCCATCCTTTGGAATCATAGCTAATGATTCCCGCTTTCAGCAA

Coding sequence (CDS)

ATGGCAACGGCCGTCTCTGTAATTTGCTTTTCAACAACTTCTTTGTTTAGTGATGGAAATTTGAGGTTTCAGTTGAAATTTCGTAACCGACCCACAAAATTGAATTCCAAACAATTGAGGGTTGAAGCCCTTAAAGAGAAAACAGGCGAAATCGAAGGCCCATCTCAAGCAGATGAAGTCACCCAAAAGTATGGACTTGAAGCCGGCCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGAAGGTGAAGGGAAAAACAAATCAAAGGGTGATCAGGCAAAAGAGCTGTTAGCTAAATATGGAGGTGCATATTTAGCGACCTCCATAACTCTGTCCCTGATCTCTTTCTCTCTGTGTTATGCGCTGATCAGCTCCGGTGTCGATGTTCAAGCTCTTCTACAGAAGGTAGGAATTTCAACGGATGAGACTGGAGAGAAAGTAGGAACCTTTGCTTTGGCTTATGCTGCCCATAAAGCTGCTTCTCCAATAAGGTTTCCTCCAACAGTGGCCCTAACTCCAATAGTTGCAAGTTGGATTGGGAAGAAAGTTGATCAAGAGAAATAG

Protein sequence

MATAVSVICFSTTSLFSDGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGPSQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLSLISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVDQEK

Homology

[Close]

BLAST of Sed0028181 vs. NCBI nr
Match: XP_038901803.1 (uncharacterized protein LOC120088508 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.8e-75
Identity = 159/198 (80.30%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MATAVSVICFSTTSL-FSDGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGP----- 60
           MATA+S+I FS++S+ F+D N RF+  F N P K NSK+ RV+ALK+KTGEIE P     
Sbjct: 1   MATALSLIAFSSSSISFADPNFRFRFNFPNPPLKFNSKRFRVQALKQKTGEIERPSSSSS 60

Query: 61  -----SQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATS 120
                S ADEVT+KYGLEAGLWKIFSSKEE EEGEGKNKSKGDQAKELLAKYGGAYLATS
Sbjct: 61  SSSSSSSADEVTKKYGLEAGLWKIFSSKEESEEGEGKNKSKGDQAKELLAKYGGAYLATS 120

Query: 121 ITLSLISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPT 180
           ITLSLISFSLCYALIS+GVDVQALLQKVGIS DETGEKVGTFALAYAAHKAASPIRFPPT
Sbjct: 121 ITLSLISFSLCYALISAGVDVQALLQKVGISADETGEKVGTFALAYAAHKAASPIRFPPT 180

Query: 181 VALTPIVASWIGKKVDQE 188
           VALTPIVASWIGKKV++E
Sbjct: 181 VALTPIVASWIGKKVEKE 198

[Close]

BLAST of Sed0028181 vs. NCBI nr
Match: XP_008449587.1 (PREDICTED: uncharacterized protein LOC103491427 [Cucumis melo] >TYJ96063.1 uncharacterized protein E5676_scaffold182G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 8.1e-70
Identity = 155/194 (79.90%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MATAVSVICFSTTSLFS--DGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGP---- 60
           MATA S+I FS+ S FS    N RF   F N P K NSK  RV+ALK+KTGEI+ P    
Sbjct: 1   MATASSLIAFSSFSNFSFTHPNFRFHFNFPNPPLKFNSKSFRVQALKQKTGEIDRPSPSS 60

Query: 61  -SQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLS 120
            S ADEVT+KYGLEAGLWKIFSSK   EEGEG NKSKGDQAKELLAKYGGAYLATSITLS
Sbjct: 61  SSSADEVTKKYGLEAGLWKIFSSK---EEGEGTNKSKGDQAKELLAKYGGAYLATSITLS 120

Query: 121 LISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180
           LISFSLCYALIS+GVDVQALLQKVGISTDETG KVGTFALAYAAHKAASPIRFPPTVALT
Sbjct: 121 LISFSLCYALISAGVDVQALLQKVGISTDETGGKVGTFALAYAAHKAASPIRFPPTVALT 180

Query: 181 PIVASWIGKKVDQE 188
           PIVASWIGKKV++E
Sbjct: 181 PIVASWIGKKVEKE 191

[Close]

BLAST of Sed0028181 vs. NCBI nr
Match: KAA0061727.1 (FAM210B-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 155/194 (79.90%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MATAVSVICFSTTSLFS--DGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGP---- 60
           MATA S+I FS+ S FS    N RF   F N P K NSK  RV+ALK+KTGEI+ P    
Sbjct: 1   MATASSLIAFSSFSNFSFTHPNFRFHFNFPNPPLKFNSKPFRVQALKQKTGEIDRPSPSS 60

Query: 61  -SQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLS 120
            S ADEVT+KYGLEAGLWKIFSSK   EEGEG NKSKGDQAKELLAKYGGAYLATSITLS
Sbjct: 61  SSSADEVTKKYGLEAGLWKIFSSK---EEGEGTNKSKGDQAKELLAKYGGAYLATSITLS 120

Query: 121 LISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180
           LISFSLCYALIS+GVDVQALLQKVGISTDETG KVGTFALAYAAHKAASPIRFPPTVALT
Sbjct: 121 LISFSLCYALISAGVDVQALLQKVGISTDETGGKVGTFALAYAAHKAASPIRFPPTVALT 180

Query: 181 PIVASWIGKKVDQE 188
           PIVASWIGKKV++E
Sbjct: 181 PIVASWIGKKVEKE 191

[Close]

BLAST of Sed0028181 vs. NCBI nr
Match: XP_004140165.1 (uncharacterized protein LOC101219558 [Cucumis sativus] >KGN48043.1 hypothetical protein Csa_003196 [Cucumis sativus])

HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69
Identity = 153/194 (78.87%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 1   MATAVSVICFSTTS--LFSDGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGP---- 60
           MA A S+I FS++S   F+  N RF   F N P K NSK  RV+ALK+KTGEIE P    
Sbjct: 1   MAIASSLIAFSSSSNISFTHPNFRFHFNFPNPPLKFNSKPFRVQALKQKTGEIERPSPSS 60

Query: 61  -SQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLS 120
            S ADEVT+KYGLEAGLWKIFSSK   EEGEG NKSKGDQAKELLAKYGGAYLATSITLS
Sbjct: 61  SSSADEVTKKYGLEAGLWKIFSSK---EEGEGTNKSKGDQAKELLAKYGGAYLATSITLS 120

Query: 121 LISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180
           LISFSLCYALIS+GVDVQ LLQKVGIS DETGEKVGTFALAYAAHKAASPIRFPPTVALT
Sbjct: 121 LISFSLCYALISAGVDVQVLLQKVGISIDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180

Query: 181 PIVASWIGKKVDQE 188
           PIVASWIGKKV++E
Sbjct: 181 PIVASWIGKKVEKE 191

[Close]

BLAST of Sed0028181 vs. NCBI nr
Match: XP_022152952.1 (uncharacterized protein LOC111020570 isoform X1 [Momordica charantia])

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-68
Identity = 149/190 (78.42%), Postives = 165/190 (86.84%), Query Frame = 0


Query: 6   SVICFSTTSL-----FSDGNLRFQLKFRNRPTKLNSK--QLRVEALKEKTGEIEGPSQAD 65
           S+ICFS+  +     F+DGN RF LK  NR  K NS+  + RV+ALKEKTGEIE PS  D
Sbjct: 3   SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPS-PD 62

Query: 66  EVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLSLISFS 125
           EVT+KYGLEAGLWKIFSSKEEGE   GK KSKG+QAKELLAKYGGAYLATSITLSLISFS
Sbjct: 63  EVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFS 122

Query: 126 LCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAS 185
           LCYALIS+G+DVQALLQKVGIS +ETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAS
Sbjct: 123 LCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAS 182

Query: 186 WIGKKVDQEK 189
           WIGKKV++++
Sbjct: 183 WIGKKVEKQE 191

[Close]

BLAST of Sed0028181 vs. ExPASy Swiss-Prot
Match: Q96KR6 (Protein FAM210B, mitochondrial OS=Homo sapiens OX=9606 GN=FAM210B PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 6.3e-09
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 84  EGKNKSKGDQAKELLAKYGGAYLATSITLSLISFSLCYALISSGVDVQALLQKVGISTDE 143
           E K +SK  Q K++  +YG   ++  I +SLIS  + Y ++SSGVD+ A+L K+G     
Sbjct: 79  EEKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESL 138

Query: 144 TGEKV----GTFALAYAAHKAASPIRFPPTVALTPIVASWIGK 183
              K+     TF +AYA HK  +P+R   T+   P++  +  K
Sbjct: 139 VQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRK 181

[Close]

BLAST of Sed0028181 vs. ExPASy Swiss-Prot
Match: Q9D8B6 (Protein FAM210B, mitochondrial OS=Mus musculus OX=10090 GN=Fam210b PE=1 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 83  GEGKNKSKGDQAKELLAKYGGAYLATSITLSLISFSLCYALISSGVDVQALLQKVGISTD 142
           G  K  S+  Q K++  +YG   ++  I +SL+S  + Y ++SSG+D+ A+L K+G    
Sbjct: 76  GTEKKLSRTQQLKKVFQEYGAVGVSMHIGISLVSLGIFYTVVSSGIDMSAILLKLGFKES 135

Query: 143 ETGEKV----GTFALAYAAHKAASPIRFPPTVALTPIVASW 180
               K+     TF +AYA HK  +P+R   T+   P V  +
Sbjct: 136 LVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPFVVRY 176

[Close]

BLAST of Sed0028181 vs. ExPASy TrEMBL
Match: A0A5D3B9U1 (DUF1279 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00220 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.9e-70
Identity = 155/194 (79.90%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MATAVSVICFSTTSLFS--DGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGP---- 60
           MATA S+I FS+ S FS    N RF   F N P K NSK  RV+ALK+KTGEI+ P    
Sbjct: 1   MATASSLIAFSSFSNFSFTHPNFRFHFNFPNPPLKFNSKSFRVQALKQKTGEIDRPSPSS 60

Query: 61  -SQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLS 120
            S ADEVT+KYGLEAGLWKIFSSK   EEGEG NKSKGDQAKELLAKYGGAYLATSITLS
Sbjct: 61  SSSADEVTKKYGLEAGLWKIFSSK---EEGEGTNKSKGDQAKELLAKYGGAYLATSITLS 120

Query: 121 LISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180
           LISFSLCYALIS+GVDVQALLQKVGISTDETG KVGTFALAYAAHKAASPIRFPPTVALT
Sbjct: 121 LISFSLCYALISAGVDVQALLQKVGISTDETGGKVGTFALAYAAHKAASPIRFPPTVALT 180

Query: 181 PIVASWIGKKVDQE 188
           PIVASWIGKKV++E
Sbjct: 181 PIVASWIGKKVEKE 191

[Close]

BLAST of Sed0028181 vs. ExPASy TrEMBL
Match: A0A1S3BN10 (uncharacterized protein LOC103491427 OS=Cucumis melo OX=3656 GN=LOC103491427 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.9e-70
Identity = 155/194 (79.90%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MATAVSVICFSTTSLFS--DGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGP---- 60
           MATA S+I FS+ S FS    N RF   F N P K NSK  RV+ALK+KTGEI+ P    
Sbjct: 1   MATASSLIAFSSFSNFSFTHPNFRFHFNFPNPPLKFNSKSFRVQALKQKTGEIDRPSPSS 60

Query: 61  -SQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLS 120
            S ADEVT+KYGLEAGLWKIFSSK   EEGEG NKSKGDQAKELLAKYGGAYLATSITLS
Sbjct: 61  SSSADEVTKKYGLEAGLWKIFSSK---EEGEGTNKSKGDQAKELLAKYGGAYLATSITLS 120

Query: 121 LISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180
           LISFSLCYALIS+GVDVQALLQKVGISTDETG KVGTFALAYAAHKAASPIRFPPTVALT
Sbjct: 121 LISFSLCYALISAGVDVQALLQKVGISTDETGGKVGTFALAYAAHKAASPIRFPPTVALT 180

Query: 181 PIVASWIGKKVDQE 188
           PIVASWIGKKV++E
Sbjct: 181 PIVASWIGKKVEKE 191

[Close]

BLAST of Sed0028181 vs. ExPASy TrEMBL
Match: A0A5A7V4A0 (FAM210B-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001020 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.1e-70
Identity = 155/194 (79.90%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MATAVSVICFSTTSLFS--DGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGP---- 60
           MATA S+I FS+ S FS    N RF   F N P K NSK  RV+ALK+KTGEI+ P    
Sbjct: 1   MATASSLIAFSSFSNFSFTHPNFRFHFNFPNPPLKFNSKPFRVQALKQKTGEIDRPSPSS 60

Query: 61  -SQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLS 120
            S ADEVT+KYGLEAGLWKIFSSK   EEGEG NKSKGDQAKELLAKYGGAYLATSITLS
Sbjct: 61  SSSADEVTKKYGLEAGLWKIFSSK---EEGEGTNKSKGDQAKELLAKYGGAYLATSITLS 120

Query: 121 LISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180
           LISFSLCYALIS+GVDVQALLQKVGISTDETG KVGTFALAYAAHKAASPIRFPPTVALT
Sbjct: 121 LISFSLCYALISAGVDVQALLQKVGISTDETGGKVGTFALAYAAHKAASPIRFPPTVALT 180

Query: 181 PIVASWIGKKVDQE 188
           PIVASWIGKKV++E
Sbjct: 181 PIVASWIGKKVEKE 191

[Close]

BLAST of Sed0028181 vs. ExPASy TrEMBL
Match: A0A0A0KEW3 (DUF1279 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425800 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 153/194 (78.87%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 1   MATAVSVICFSTTS--LFSDGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIEGP---- 60
           MA A S+I FS++S   F+  N RF   F N P K NSK  RV+ALK+KTGEIE P    
Sbjct: 1   MAIASSLIAFSSSSNISFTHPNFRFHFNFPNPPLKFNSKPFRVQALKQKTGEIERPSPSS 60

Query: 61  -SQADEVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLS 120
            S ADEVT+KYGLEAGLWKIFSSK   EEGEG NKSKGDQAKELLAKYGGAYLATSITLS
Sbjct: 61  SSSADEVTKKYGLEAGLWKIFSSK---EEGEGTNKSKGDQAKELLAKYGGAYLATSITLS 120

Query: 121 LISFSLCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180
           LISFSLCYALIS+GVDVQ LLQKVGIS DETGEKVGTFALAYAAHKAASPIRFPPTVALT
Sbjct: 121 LISFSLCYALISAGVDVQVLLQKVGISIDETGEKVGTFALAYAAHKAASPIRFPPTVALT 180

Query: 181 PIVASWIGKKVDQE 188
           PIVASWIGKKV++E
Sbjct: 181 PIVASWIGKKVEKE 191

[Close]

BLAST of Sed0028181 vs. ExPASy TrEMBL
Match: A0A6J1DHN1 (uncharacterized protein LOC111020570 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020570 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 9.7e-69
Identity = 149/190 (78.42%), Postives = 165/190 (86.84%), Query Frame = 0


Query: 6   SVICFSTTSL-----FSDGNLRFQLKFRNRPTKLNSK--QLRVEALKEKTGEIEGPSQAD 65
           S+ICFS+  +     F+DGN RF LK  NR  K NS+  + RV+ALKEKTGEIE PS  D
Sbjct: 3   SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPS-PD 62

Query: 66  EVTQKYGLEAGLWKIFSSKEEGEEGEGKNKSKGDQAKELLAKYGGAYLATSITLSLISFS 125
           EVT+KYGLEAGLWKIFSSKEEGE   GK KSKG+QAKELLAKYGGAYLATSITLSLISFS
Sbjct: 63  EVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFS 122

Query: 126 LCYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAS 185
           LCYALIS+G+DVQALLQKVGIS +ETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAS
Sbjct: 123 LCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAS 182

Query: 186 WIGKKVDQEK 189
           WIGKKV++++
Sbjct: 183 WIGKKVEKQE 191

[Close]

BLAST of Sed0028181 vs. TAIR 10
Match: AT2G27290.1 (Protein of unknown function (DUF1279) )

HSP 1 Score: 221.5 bits (563), Expect = 5.8e-58
Identity = 126/189 (66.67%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 12  TTSLFSDGNLRFQLKFRNRPTKLNSKQLRVEALKEKTGEIE----------GPSQADEVT 71
           ++SL +  NL  Q++F +     +SK+ R  A++EK  +I+           P  A+EVT
Sbjct: 11  SSSLLNTRNL--QIRFFHSSVSASSKKFRCRAVREKAEDIDKNISPPSSSPPPPSAEEVT 70

Query: 72  QKYGLEAGLWKIFSSK-EEGEEGEG-KNKSKGDQAKELLAKYGGAYLATSITLSLISFSL 131
           +KYGLE GLWKI SSK +EG +G+  K KSK D+AKELLAKYGGAYLATSITLSLISFSL
Sbjct: 71  KKYGLEVGLWKILSSKDDEGSDGDNKKKKSKTDEAKELLAKYGGAYLATSITLSLISFSL 130

Query: 132 CYALISSGVDVQALLQKVGISTDETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASW 189
           CY L++SGVDVQALL KVGIST+ETGEKVG FALAYAAHKAASPIRFPPTVALTPIVA+W
Sbjct: 131 CYVLVTSGVDVQALLLKVGISTNETGEKVGAFALAYAAHKAASPIRFPPTVALTPIVANW 190

[Close]

BLAST of Sed0028181 vs. TAIR 10
Match: AT2G20940.1 (Protein of unknown function (DUF1279) )

HSP 1 Score: 44.7 bits (104), Expect = 9.7e-05
Identity = 35/117 (29.91%), Postives = 54/117 (46.15%), Query Frame = 0


Query: 95  KELLAKYGGAYLATSITLSLISFSLCYALISSGVDVQALLQK---------------VGI 154
           KE++ KYG   L    ++S +S S  Y  I + VDV++LL+K               + +
Sbjct: 6   KEIVKKYGKVALGVHFSVSGVSISGFYIAIKNNVDVESLLEKYQIPWFSSKENPNPSLDL 65

Query: 155 STDETGEKV-------------GTFALAYAAHKAASPIRFPPTVALTPIVASWIGKK 184
             +E G                G  ALA   +KA  PIR P T+ALTP +A ++ ++
Sbjct: 66  KLEEQGSVTSDNKTKQLAKSAGGALALAVLCNKALFPIRVPITMALTPPIARFLRQR 122

The following BLAST results are available for this feature:

BLAST of Sed0028181 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901803.1	3.8e-75	80.30	uncharacterized protein LOC120088508 [Benincasa hispida]	[more]
XP_008449587.1	8.1e-70	79.90	PREDICTED: uncharacterized protein LOC103491427 [Cucumis melo] >TYJ96063.1 uncha...	[more]
KAA0061727.1	1.1e-69	79.90	FAM210B-like protein [Cucumis melo var. makuwa]	[more]
XP_004140165.1	4.0e-69	78.87	uncharacterized protein LOC101219558 [Cucumis sativus] >KGN48043.1 hypothetical ...	[more]
XP_022152952.1	2.0e-68	78.42	uncharacterized protein LOC111020570 isoform X1 [Momordica charantia]	[more]

BLAST of Sed0028181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96KR6	6.3e-09	34.95	Protein FAM210B, mitochondrial OS=Homo sapiens OX=9606 GN=FAM210B PE=1 SV=2	[more]
Q9D8B6	1.6e-07	32.67	Protein FAM210B, mitochondrial OS=Mus musculus OX=10090 GN=Fam210b PE=1 SV=3	[more]

BLAST of Sed0028181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B9U1	3.9e-70	79.90	DUF1279 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BN10	3.9e-70	79.90	uncharacterized protein LOC103491427 OS=Cucumis melo OX=3656 GN=LOC103491427 PE=...	[more]
A0A5A7V4A0	5.1e-70	79.90	FAM210B-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212...	[more]
A0A0A0KEW3	1.9e-69	78.87	DUF1279 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425800 PE=...	[more]
A0A6J1DHN1	9.7e-69	78.42	uncharacterized protein LOC111020570 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0028181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27290.1	5.8e-58	66.67	Protein of unknown function (DUF1279)	[more]
AT2G20940.1	9.7e-05	29.91	Protein of unknown function (DUF1279)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009688	Protein FAM210A/B-like domain	PFAM	PF06916	DUF1279	coord: 93..174 e-value: 1.7E-24 score: 86.1
None	No IPR available	PANTHER	PTHR21377:SF17	OJ991214_12.13 PROTEIN	coord: 40..185
None	No IPR available	PANTHER	PTHR21377	UNCHARACTERIZED	coord: 40..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028181.1	Sed0028181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane