Sed0028153 (gene) Chayote v1

Overview


Name	Sed0028153
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR50-like
Location	LG06: 172750 .. 173399 (-)
RNA-Seq Expression	Sed0028153
Synteny	Sed0028153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGCATCTCATGTCCACCACCAAGGTCCAAAAGCAACAAGCCATGGGGAAGCTCACAAAGCTGAAGTCCGCCATAAGACGGTGGCCTTCCATCTCCAAGCTCTCCCGCACCACTCCGGACGTCGTCGACGACGCCTCCTCCAACCTCCACCCGGTGTTCGTGGGCAGGTCCCGCCGCCGCTACCTGCTCTCCTCGGACGTGGTCCAACACCCGCTGTTCCAGGAGCTGCTCGACAAGTCGTCGGGGCCCGAGGAGGAGGAGGGTCTTGTGGTCCTCTCCTGCGAGGTGGTTATGTTCGACCACCTGCTATGGATGCTGCAAAATGCTGCCACTCACTTGGGCTCCGCACATGAGCTCGTCCAATTCTACACTTAAATCTTAAAAGCTACGTACTAATTAACCCCCCATTTGATTTTATTATTAATCAATCAAACAGAGACTAATTCTCCAAAGGCTTTATTTATATATTGTTTGTTTGTTTGTATAATTACTGTATCTGTGTGTGTGTTCATTTTTCTCCTCAACCTGCAACCAAACACCCTTAGCTAGCGCTTCTGTGTATTTGTCTTTGTTTTCTTTTGTTACACACAGTGTCAGATCGTACTACTCACATTCTCTGTTTATAATCTTTCTTTCTTTCTTTCTTTCCA

mRNA sequence

GTGCATCTCATGTCCACCACCAAGGTCCAAAAGCAACAAGCCATGGGGAAGCTCACAAAGCTGAAGTCCGCCATAAGACGGTGGCCTTCCATCTCCAAGCTCTCCCGCACCACTCCGGACGTCGTCGACGACGCCTCCTCCAACCTCCACCCGGTGTTCGTGGGCAGGTCCCGCCGCCGCTACCTGCTCTCCTCGGACGTGGTCCAACACCCGCTGTTCCAGGAGCTGCTCGACAAGTCGTCGGGGCCCGAGGAGGAGGAGGGTCTTGTGGTCCTCTCCTGCGAGGTGGTTATGTTCGACCACCTGCTATGGATGCTGCAAAATGCTGCCACTCACTTGGGCTCCGCACATGAGCTCGTCCAATTCTACACTTAAATCTTAAAAGCTACGTACTAATTAACCCCCCATTTGATTTTATTATTAATCAATCAAACAGAGACTAATTCTCCAAAGGCTTTATTTATATATTGTTTGTTTGTTTGTATAATTACTGTATCTGTGTGTGTGTTCATTTTTCTCCTCAACCTGCAACCAAACACCCTTAGCTAGCGCTTCTGTGTATTTGTCTTTGTTTTCTTTTGTTACACACAGTGTCAGATCGTACTACTCACATTCTCTGTTTATAATCTTTCTTTCTTTCTTTCTTTCCA

Coding sequence (CDS)

ATGTCCACCACCAAGGTCCAAAAGCAACAAGCCATGGGGAAGCTCACAAAGCTGAAGTCCGCCATAAGACGGTGGCCTTCCATCTCCAAGCTCTCCCGCACCACTCCGGACGTCGTCGACGACGCCTCCTCCAACCTCCACCCGGTGTTCGTGGGCAGGTCCCGCCGCCGCTACCTGCTCTCCTCGGACGTGGTCCAACACCCGCTGTTCCAGGAGCTGCTCGACAAGTCGTCGGGGCCCGAGGAGGAGGAGGGTCTTGTGGTCCTCTCCTGCGAGGTGGTTATGTTCGACCACCTGCTATGGATGCTGCAAAATGCTGCCACTCACTTGGGCTCCGCACATGAGCTCGTCCAATTCTACACTTAA

Protein sequence

MSTTKVQKQQAMGKLTKLKSAIRRWPSISKLSRTTPDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQFYT

Homology

[Close]

BLAST of Sed0028153 vs. NCBI nr
Match: KAG6581780.1 (Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018233.1 hypothetical protein SDJN02_20101, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.9 bits (416), Expect = 4.5e-37
Identity = 86/115 (74.78%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASS-----NLHPVFVGRSRRRYLLSSDVVQ 71
           +GKLTKLKSAI+RWPSISKLSRTT      A++     NLHPVFVGRSRRRYLLSSDVVQ
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSDVVQ 63

Query: 72  HPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQFYT 122
           HPLFQE++DKSS   +EEG VV+SCEVV+F+HLLWML+NA T LGSA ELVQFYT
Sbjct: 64  HPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Sed0028153 vs. NCBI nr
Match: XP_022955880.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_023527039.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.5 bits (415), Expect = 5.8e-37
Identity = 86/115 (74.78%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQ 71
           +GKLTKLKSAI+RWPSISKLSRTT          D   NLHPVFVGRSRRRYLLSSDVVQ
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQ 63

Query: 72  HPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQFYT 122
           HPLFQE++DKSS   +EEG VV+SCEVV+F+HLLWML+NA T LGSA ELVQFYT
Sbjct: 64  HPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Sed0028153 vs. NCBI nr
Match: XP_011651720.1 (auxin-responsive protein SAUR78 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-36
Identity = 87/123 (70.73%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASSN-------------LHPVFVGRSRRRY 71
           +GKLTKLKSAI+RWPSISKLSR T      A SN             LHPVFVGRSRRRY
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRATTPTSSSAVSNATLDNDNHNHNHHLHPVFVGRSRRRY 63

Query: 72  LLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQ 122
           LLSSDVV HPLFQEL+DKSS   EE+GLV+ SCEVV+F+HLLWML+NAAT LGSA ELVQ
Sbjct: 64  LLSSDVVHHPLFQELVDKSSPNSEEQGLVI-SCEVVLFEHLLWMLENAATQLGSADELVQ 123

[Close]

BLAST of Sed0028153 vs. NCBI nr
Match: XP_022980757.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 161.8 bits (408), Expect = 3.8e-36
Identity = 84/115 (73.04%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQ 71
           +GKLTKLKSAI+RWPSISKLSRTT          D   NLHPVFVGRSRRRYLLSSDVVQ
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQ 63

Query: 72  HPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQFYT 122
           HPLFQE+++KSS   +E+G VV+SCEVV+F+HLLWML+NA T LGSA ELVQFYT
Sbjct: 64  HPLFQEVVEKSSPNSDEQG-VVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Sed0028153 vs. NCBI nr
Match: XP_038901184.1 (auxin-responsive protein SAUR78-like [Benincasa hispida])

HSP 1 Score: 161.0 bits (406), Expect = 6.4e-36
Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRT-TP-----------DVVDDASSNLHPVFVGRSRRRYL 71
           +G+LTKLKSAI+RWPSISKLSRT TP           D  D+ + +LHPVFVGRSRRRYL
Sbjct: 4   LGRLTKLKSAIKRWPSISKLSRTGTPTSSSAVSSAALDDNDNDNHHLHPVFVGRSRRRYL 63

Query: 72  LSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQF 122
           LSSDVV HPLFQEL+DKSS   +++GLVV SCEVV+F+HLLWML+NAAT LGSA ELVQF
Sbjct: 64  LSSDVVHHPLFQELVDKSSANSDDQGLVV-SCEVVLFEHLLWMLENAATQLGSADELVQF 123

[Close]

BLAST of Sed0028153 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-24
Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 13  GKLTKLKSAIRRWPSISKLSRTTPDVVDDASS------NLHPVFVGRSRRRYLLSSDVVQ 72
           GKLTKLKSAI++WPS++K   +T      A S      +LH V+VG+SRR Y+LSS V+ 
Sbjct: 5   GKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSKCEDLHVVYVGKSRRPYMLSSHVIA 64

Query: 73  HPLFQELLDKSSGPEEE---EGLVVLSCEVVMFDHLLWMLQNAAT--------HLGSAHE 122
           HPLFQELLD+SS   EE   +  V+++CEVV+F+HLLWML+N+++          GS  E
Sbjct: 65  HPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDDRERGSVEE 124

[Close]

BLAST of Sed0028153 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.9e-24
Identity = 58/116 (50.00%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISK---LSRTTPDVVDDAS--SNLHPVFVGRSRRRYLLSSDVVQ 71
           +GKLTKLKSA+++WPS +K    S ++  V D+ S  +NLH V+VG++RR Y+L  D++ 
Sbjct: 4   VGKLTKLKSAMKKWPSFAKNHHHSTSSAAVSDELSEDNNLHVVYVGQTRRPYMLRPDIIS 63

Query: 72  HPLFQELLDKSSGPE-EEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQFYT 122
           HPLFQEL+D+SS    E++  +V++CEVV+F+HLLWML++     GS  EL +FYT
Sbjct: 64  HPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLKSGQEG-GSVEELAEFYT 118

[Close]

BLAST of Sed0028153 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-17
Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 14  KLTKLKSAIRRWPSISKLSRTTPDVVDDA---------SSNLHPVFVGRSRRRYLLSSDV 73
           KL KLKS +++  S +      P   + +         S +L  V+VGR+RR Y +SSDV
Sbjct: 7   KLMKLKSVLKKLNSFNTKPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRRTYHVSSDV 66

Query: 74  VQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA---ATHLGSAHELVQFY 121
           V HPLFQ+L     G   E+G + +SCEVV+F+HLLWML+NA    +   S +ELV+FY
Sbjct: 67  VSHPLFQQLAAVDGGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESVYELVEFY 125

[Close]

BLAST of Sed0028153 vs. ExPASy TrEMBL
Match: A0A6J1GWA8 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111457732 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37
Identity = 86/115 (74.78%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQ 71
           +GKLTKLKSAI+RWPSISKLSRTT          D   NLHPVFVGRSRRRYLLSSDVVQ
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQ 63

Query: 72  HPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQFYT 122
           HPLFQE++DKSS   +EEG VV+SCEVV+F+HLLWML+NA T LGSA ELVQFYT
Sbjct: 64  HPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Sed0028153 vs. ExPASy TrEMBL
Match: A0A0A0LBZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646510 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.3e-37
Identity = 87/123 (70.73%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASSN-------------LHPVFVGRSRRRY 71
           +GKLTKLKSAI+RWPSISKLSR T      A SN             LHPVFVGRSRRRY
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRATTPTSSSAVSNATLDNDNHNHNHHLHPVFVGRSRRRY 63

Query: 72  LLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQ 122
           LLSSDVV HPLFQEL+DKSS   EE+GLV+ SCEVV+F+HLLWML+NAAT LGSA ELVQ
Sbjct: 64  LLSSDVVHHPLFQELVDKSSPNSEEQGLVI-SCEVVLFEHLLWMLENAATQLGSADELVQ 123

[Close]

BLAST of Sed0028153 vs. ExPASy TrEMBL
Match: A0A6J1IS54 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480030 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36
Identity = 84/115 (73.04%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQ 71
           +GKLTKLKSAI+RWPSISKLSRTT          D   NLHPVFVGRSRRRYLLSSDVVQ
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQ 63

Query: 72  HPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQFYT 122
           HPLFQE+++KSS   +E+G VV+SCEVV+F+HLLWML+NA T LGSA ELVQFYT
Sbjct: 64  HPLFQEVVEKSSPNSDEQG-VVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Sed0028153 vs. ExPASy TrEMBL
Match: A0A5D3D6I8 (Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00520 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.7e-35
Identity = 83/124 (66.94%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTTPDVV--------------DDASSNLHPVFVGRSRRR 71
           +GKLTKLKSAI+RWPSISKLSRT                   D+ + +LHPVFVGRSRRR
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRTPTSSSSSSAVSSATLDNDNDNDNHHLHPVFVGRSRRR 63

Query: 72  YLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELV 122
           YLLSSDVV HPLFQEL+DKSS   EEE  +V+SCEVV+F+HLLWML+NA T LGSA ELV
Sbjct: 64  YLLSSDVVHHPLFQELVDKSSPNSEEEQGLVVSCEVVLFEHLLWMLENADTQLGSADELV 123

[Close]

BLAST of Sed0028153 vs. ExPASy TrEMBL
Match: A0A1S4E2S4 (auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103499187 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.7e-35
Identity = 83/124 (66.94%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISKLSRTTPDVV--------------DDASSNLHPVFVGRSRRR 71
           +GKLTKLKSAI+RWPSISKLSRT                   D+ + +LHPVFVGRSRRR
Sbjct: 4   LGKLTKLKSAIKRWPSISKLSRTPTSSSSSSAVSSATLDNDNDNDNHHLHPVFVGRSRRR 63

Query: 72  YLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELV 122
           YLLSSDVV HPLFQEL+DKSS   EEE  +V+SCEVV+F+HLLWML+NA T LGSA ELV
Sbjct: 64  YLLSSDVVHHPLFQELVDKSSPNSEEEQGLVVSCEVVLFEHLLWMLENADTQLGSADELV 123

[Close]

BLAST of Sed0028153 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 13  GKLTKLKSAIRRWPSISKLSRTTPDVVDDASS------NLHPVFVGRSRRRYLLSSDVVQ 72
           GKLTKLKSAI++WPS++K   +T      A S      +LH V+VG+SRR Y+LSS V+ 
Sbjct: 5   GKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSKCEDLHVVYVGKSRRPYMLSSHVIA 64

Query: 73  HPLFQELLDKSSGPEEE---EGLVVLSCEVVMFDHLLWMLQNAAT--------HLGSAHE 122
           HPLFQELLD+SS   EE   +  V+++CEVV+F+HLLWML+N+++          GS  E
Sbjct: 65  HPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDDRERGSVEE 124

[Close]

BLAST of Sed0028153 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 4.2e-25
Identity = 58/116 (50.00%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 12  MGKLTKLKSAIRRWPSISK---LSRTTPDVVDDAS--SNLHPVFVGRSRRRYLLSSDVVQ 71
           +GKLTKLKSA+++WPS +K    S ++  V D+ S  +NLH V+VG++RR Y+L  D++ 
Sbjct: 4   VGKLTKLKSAMKKWPSFAKNHHHSTSSAAVSDELSEDNNLHVVYVGQTRRPYMLRPDIIS 63

Query: 72  HPLFQELLDKSSGPE-EEEGLVVLSCEVVMFDHLLWMLQNAATHLGSAHELVQFYT 122
           HPLFQEL+D+SS    E++  +V++CEVV+F+HLLWML++     GS  EL +FYT
Sbjct: 64  HPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLKSGQEG-GSVEELAEFYT 118

[Close]

BLAST of Sed0028153 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18
Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 14  KLTKLKSAIRRWPSISKLSRTTPDVVDDA---------SSNLHPVFVGRSRRRYLLSSDV 73
           KL KLKS +++  S +      P   + +         S +L  V+VGR+RR Y +SSDV
Sbjct: 7   KLMKLKSVLKKLNSFNTKPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRRTYHVSSDV 66

Query: 74  VQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA---ATHLGSAHELVQFY 121
           V HPLFQ+L     G   E+G + +SCEVV+F+HLLWML+NA    +   S +ELV+FY
Sbjct: 67  VSHPLFQQLAAVDGGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESVYELVEFY 125

[Close]

BLAST of Sed0028153 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 29  SKLSRTTP-DVVDDASSNLHP-----VFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEE 88
           SK +R  P D + D   +  P     V VGR+++ YL+S   ++HPL   L++K    EE
Sbjct: 32  SKSARRDPQDHLQDVDQSPTPSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQQRYEE 91

Query: 89  EEG-----LVVLSCEVVMFDHLLWMLQ 105
           ++      ++ + CEVV+FDHLLWML+
Sbjct: 92  DDNEDGSCIITVKCEVVLFDHLLWMLE 118

[Close]

BLAST of Sed0028153 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 48.9 bits (115), Expect = 3.3e-06
Identity = 28/88 (31.82%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 15 LTKLKSAIRRWPSISKLSRTTPDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELL 74
          + KL+  +R+W + +++S     V  D  S    V+VGRS RR+++ +  + HP+   LL
Sbjct: 14 IVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVLATYLNHPILMNLL 73

Query: 75 DKSSGPEEE-----EGLVVLSCEVVMFD 98
           K+   EEE     +G +V+ CE  +F+
Sbjct: 74 VKA---EEEFGFANQGPLVIPCEESVFE 98

The following BLAST results are available for this feature:

BLAST of Sed0028153 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581780.1	4.5e-37	74.78	Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022955880.1	5.8e-37	74.78	auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_023527039.1 auxin-...	[more]
XP_011651720.1	1.3e-36	70.73	auxin-responsive protein SAUR78 [Cucumis sativus]	[more]
XP_022980757.1	3.8e-36	73.04	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_038901184.1	6.4e-36	70.49	auxin-responsive protein SAUR78-like [Benincasa hispida]	[more]

BLAST of Sed0028153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQI6	1.5e-24	50.00	Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 S...	[more]
Q9C9E1	5.9e-24	50.00	Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 S...	[more]
Q29PU2	1.4e-17	42.86	Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 S...	[more]

BLAST of Sed0028153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWA8	2.8e-37	74.78	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]
A0A0A0LBZ7	6.3e-37	70.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646510 PE=3 SV=1	[more]
A0A6J1IS54	1.8e-36	73.04	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480030...	[more]
A0A5D3D6I8	7.7e-35	66.94	Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4E2S4	7.7e-35	66.94	auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103499187 PE=...	[more]

BLAST of Sed0028153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17345.1	1.1e-25	50.00	SAUR-like auxin-responsive protein family	[more]
AT1G72430.1	4.2e-25	50.00	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	1.0e-18	42.86	SAUR-like auxin-responsive protein family	[more]
AT3G12955.1	1.1e-09	37.93	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	3.3e-06	31.82	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 27..103 e-value: 7.9E-16 score: 58.0
None	No IPR available	PANTHER	PTHR31374:SF5	AUXIN-RESPONSIVE PROTEIN SAUR78	coord: 12..121
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 12..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028153.1	Sed0028153.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin