Sed0028121 (gene) Chayote v1

Overview


Name	Sed0028121
Type	gene
Organism	Sechium edule (Chayote v1)
Description	C2 domain-containing protein
Location	LG01: 23530807 .. 23532861 (+)
RNA-Seq Expression	Sed0028121
Synteny	Sed0028121

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAGTTGTTGCCAATTTATAGCATCCAGCCAATAGGATAAAGGCCACAGAAAAAGATCAAAGAAAAAAATTCTCTCAATTTTTCTCTTTTTTGGAGTGTTTAATTTGCAAAGGTTGAGAAAATTAAAGGTTTGAAAATGGAGAATTTGATGGGTCTGGTAAGAATCCATGTGTTGAGAGGTGTTAATCTTGCTGTAAGAGATGTTGTTAGCAGTGATCCTTATGTTGTTTTCAAGATGGGCAAACAGGTTTCTTCTCCTTCTTCATCATTTCTCTGTTTTTGTTTATCTATGGAGCTTTTTTGTCTTTTTCTAATACTTTTTTTTTTAAATTAATATTTTTGTTCCTTTTATGTTCTCATGGTATTTGAAAACTAGATTAAATTTTGCGTGAGAGCTAAATTTTCTTGATTGTTGACGAGGAGGATGAGTTTTTTATGTATAAAAATGTCTTGATTAAACATTTAAGTGTTGAGGTGATTTAATACGGTATTAGATTGTCAACAAGAACGTAACTCAAGTATCCATTTAAAATATGAACGATTGAATCTAATTCTAATTTCAAATATTATGGAATAAATAAAAAAAAAAAATTTAGAAGTGGAATAAATAAAATTTACTTGTTAGATTTGGTGTTAATTTTTTTTACCTACAAATTAAAGAGAGTTAAAAAGTATTTTATGAAAGGTTGAATGGATGTGCTAACAAAAAAAAGGTAAAGGTTAATTACAATGATATATAATTGGGAAATTGTAGTCTATAGTCCAATTTCACAAAATAATTGCAGATCTAAGTAAATTTAAATTTTTTTGTAAAATCCAAAGTCAAATATATAGTATGATTAATACTTATTGCCTCGTATAATTTAGGATATTAACATAGTATTTTGTATTATTAATATAATATTATGTATTATTAATATAATATTATATGTTATTAGTACAATATTGAATATTAATCCAGTATTATGTATTAATTATACCGTACAATTTTTATACGATATAACTATGTTTGCTATTTTTTTTTCTAGTATCGTAATACTTTTTTTAATTTGGTCCATCCCTAAAAAAAACCTTTATAATTTGATTGATACAATGTTATAAGTTTGAATTTACTATATTCAAATTTTATTGAATTAAATTTTTTTTGAGTTTTGAGTTTAAACTTTTGTGGTGTATGAGTTTTCATTGCCTATTTTAAAATTTATGGGAGAACCGAATGGGTCAATGATGCAATGGTTTCCGTATTTGGTTATAAACCAGTTCAACACCACCGCATCTCTCTCCCCCAATTTGTACTAAAAAAAATTTATGGGAGAAAGTGTTTAGATTTTATTTATTCTACTTGTCGATTATAACTTTTGTGAATATTGTTGAGTACGACTATTGTAAAGTAAATCAATTCTTCTGCTTGATATAGAAATTGAAGACTCGAGTAGTGAAACATAATATCAATCCTGAGTGGAACGAAGATCTAACCCTATCAATCCAAAATCCAAATCTCCCTGTCAATATGGTAACAAAAAAACTCACTTTTCTTTTCATTATTTATGATCTAAACAAATATTTCATAAAATGTTTGTTTGATAACGTTATTGTTTTGATTTATGATTACAGCTCGTATACGACAGAGACTTCTTGCTTGACGACATGATGGGCAATGCAGAGTTTGACATTCGTCCGTTCATGGAAGTTGTTAAGATGAGATTAAACAACCTCCCAAATGGAACCATCATAAGAAAGATTCAACCAAGTAGGGACAATTGCCTGTCGGAAGAAAGTTGCATTATTTGGGCAAATGGACAAGTTATTCAAAAAATGTTTCTAAGGTTAAGAAATGTCGAGTCTGGTGAAATTGAGTTGCAATTGAAATGGATTGATATTCCTGGTTCGAGGGGATTGTAGATATAAAGTAAATTATATGTTTAATATATGAGTTTCCAAAGTCTTAACTAAGTTCTGCCTTGAATATATTTATGTTATGAGTGTAGAACTCCATCACATGTGTGTGTATATATATTCTTTTTTTTTTTAAGCAAAGTGTTGTATATTCATGA

mRNA sequence

GATAGTTGTTGCCAATTTATAGCATCCAGCCAATAGGATAAAGGCCACAGAAAAAGATCAAAGAAAAAAATTCTCTCAATTTTTCTCTTTTTTGGAGTGTTTAATTTGCAAAGGTTGAGAAAATTAAAGGTTTGAAAATGGAGAATTTGATGGGTCTGGTAAGAATCCATGTGTTGAGAGGTGTTAATCTTGCTGTAAGAGATGTTGTTAGCAGTGATCCTTATGTTGTTTTCAAGATGGGCAAACAGAAATTGAAGACTCGAGTAGTGAAACATAATATCAATCCTGAGTGGAACGAAGATCTAACCCTATCAATCCAAAATCCAAATCTCCCTGTCAATATGCTCGTATACGACAGAGACTTCTTGCTTGACGACATGATGGGCAATGCAGAGTTTGACATTCGTCCGTTCATGGAAGTTGTTAAGATGAGATTAAACAACCTCCCAAATGGAACCATCATAAGAAAGATTCAACCAAGTAGGGACAATTGCCTGTCGGAAGAAAGTTGCATTATTTGGGCAAATGGACAAGTTATTCAAAAAATGTTTCTAAGGTTAAGAAATGTCGAGTCTGGTGAAATTGAGTTGCAATTGAAATGGATTGATATTCCTGGTTCGAGGGGATTGTAGATATAAAGTAAATTATATGTTTAATATATGAGTTTCCAAAGTCTTAACTAAGTTCTGCCTTGAATATATTTATGTTATGAGTGTAGAACTCCATCACATGTGTGTGTATATATATTCTTTTTTTTTTTAAGCAAAGTGTTGTATATTCATGA

Coding sequence (CDS)

ATGGAGAATTTGATGGGTCTGGTAAGAATCCATGTGTTGAGAGGTGTTAATCTTGCTGTAAGAGATGTTGTTAGCAGTGATCCTTATGTTGTTTTCAAGATGGGCAAACAGAAATTGAAGACTCGAGTAGTGAAACATAATATCAATCCTGAGTGGAACGAAGATCTAACCCTATCAATCCAAAATCCAAATCTCCCTGTCAATATGCTCGTATACGACAGAGACTTCTTGCTTGACGACATGATGGGCAATGCAGAGTTTGACATTCGTCCGTTCATGGAAGTTGTTAAGATGAGATTAAACAACCTCCCAAATGGAACCATCATAAGAAAGATTCAACCAAGTAGGGACAATTGCCTGTCGGAAGAAAGTTGCATTATTTGGGCAAATGGACAAGTTATTCAAAAAATGTTTCTAAGGTTAAGAAATGTCGAGTCTGGTGAAATTGAGTTGCAATTGAAATGGATTGATATTCCTGGTTCGAGGGGATTGTAG

Protein sequence

MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSIQNPNLPVNMLVYDRDFLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNCLSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL

Homology

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BLAST of Sed0028121 vs. NCBI nr
Match: XP_038878147.1 (protein C2-DOMAIN ABA-RELATED 4-like [Benincasa hispida])

HSP 1 Score: 301.6 bits (771), Expect = 4.1e-78
Identity = 145/165 (87.88%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+R+HV RGVNLAVRDVVSSDPYV+FKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRVHVFRGVNLAVRDVVSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+PNLPVN+LVYD+D F LDD MG+AEFD+RPF+E VKMRLNNLPNGTIIRKIQPSR+NC
Sbjct: 61  QDPNLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPNGTIIRKIQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCI+WA+G+VIQKMFLRLRNVESGEIELQL+WIDIPGSRGL
Sbjct: 121 LSEESCIVWADGKVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165

[Close]

BLAST of Sed0028121 vs. NCBI nr
Match: XP_022143275.1 (protein C2-DOMAIN ABA-RELATED 4-like [Momordica charantia])

HSP 1 Score: 301.6 bits (771), Expect = 4.1e-78
Identity = 147/165 (89.09%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV RGVNLAVRDVVSSDPYV+FKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRIHVYRGVNLAVRDVVSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+PNLPV +LVYD+D F LDD MG+AEFD+RPFME VKMRLNNLP+GTIIRKIQPSR+NC
Sbjct: 61  QDPNLPVYVLVYDKDLFSLDDKMGDAEFDVRPFMEAVKMRLNNLPSGTIIRKIQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCI+WANGQVIQKMFLRLRNVESGEIELQL+WIDIPGSRGL
Sbjct: 121 LSEESCIVWANGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165

[Close]

BLAST of Sed0028121 vs. NCBI nr
Match: XP_008457050.1 (PREDICTED: protein C2-DOMAIN ABA-RELATED 4-like [Cucumis melo])

HSP 1 Score: 298.5 bits (763), Expect = 3.5e-77
Identity = 145/165 (87.88%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV RGVNLAVRDV SSDPYV+FKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRIHVFRGVNLAVRDVCSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+P+LPVN+LVYD+D F LDD MG+AEFD+RPF+E VKMRLNNLP+GTIIRKIQPSR+NC
Sbjct: 61  QDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPSGTIIRKIQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCIIW NGQVIQKMFLRLRNVESGEIELQL+WIDIPGSRGL
Sbjct: 121 LSEESCIIWVNGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165

[Close]

BLAST of Sed0028121 vs. NCBI nr
Match: XP_004145835.1 (protein C2-DOMAIN ABA-RELATED 4 [Cucumis sativus] >KGN57815.1 hypothetical protein Csa_010991 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 4.6e-77
Identity = 145/165 (87.88%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV RGVNLAVRDV SSDPYV+FKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRIHVFRGVNLAVRDVSSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+P+LPVN+LVYD+D F LDD MG+AEFD+RPF+E VKMRLNNLP+GTIIRKIQPSR+NC
Sbjct: 61  QDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPSGTIIRKIQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCIIW NGQVIQKMFLRLRNVESGEIELQL+WIDIPGSRGL
Sbjct: 121 LSEESCIIWVNGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165

[Close]

BLAST of Sed0028121 vs. NCBI nr
Match: KAG6581202.1 (Protein C2-DOMAIN ABA-RELATED 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017941.1 Protein C2-DOMAIN ABA-RELATED 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 141/165 (85.45%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV RGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRIHVFRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+PNLPV ++VYD+D F  DD MG+AEFD+RPFME VKMRLNNLPNGTIIRK+QPSR+NC
Sbjct: 61  QDPNLPVYLIVYDKDKFSFDDRMGDAEFDVRPFMEAVKMRLNNLPNGTIIRKVQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCI+W NGQV Q+MFLRLRNVESGE+ELQL+WIDIPGSRG+
Sbjct: 121 LSEESCIVWGNGQVSQRMFLRLRNVESGEVELQLQWIDIPGSRGI 165

[Close]

BLAST of Sed0028121 vs. ExPASy Swiss-Prot
Match: Q9FHP6 (Protein C2-DOMAIN ABA-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=CAR1 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.8e-59
Identity = 109/168 (64.88%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENL+GL+RIHV RGVNLA+RD+ SSDPY+V   GKQKLKTRVVKH++NPEWN+DLTLS+
Sbjct: 1   MENLVGLLRIHVKRGVNLAIRDISSSDPYIVVHCGKQKLKTRVVKHSVNPEWNDDLTLSV 60

Query: 61  QNPNLPVNMLVYDRDFL-LDDMMGNAEFDIRPFMEVVKMRLN---NLPNGTIIRKIQPSR 120
            +PNLP+ + VYD D L  DD MG AEF I PF+E +K        LPNGTII+KI+PSR
Sbjct: 61  TDPNLPIKLTVYDYDLLSADDKMGEAEFHIGPFIEAIKFAHQLGPGLPNGTIIKKIEPSR 120

Query: 121 DNCLSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
            NCLSE S I+   G+++Q MFLRL++VE GE+ELQL+WID+PGSRG+
Sbjct: 121 KNCLSESSHIVLNQGKIVQNMFLRLQHVECGEVELQLEWIDVPGSRGI 168

[Close]

BLAST of Sed0028121 vs. ExPASy Swiss-Prot
Match: Q9C6B7 (Protein C2-DOMAIN ABA-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=CAR3 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.5e-57
Identity = 99/165 (60.00%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           M+NL+G++R+ V RGVNLAVRDV SSDPYVV K+G+QKLKT+VVK N+NP+W EDL+ ++
Sbjct: 4   MDNLLGILRVRVQRGVNLAVRDVSSSDPYVVLKLGRQKLKTKVVKQNVNPQWQEDLSFTV 63

Query: 61  QNPNLPVNMLVYDRDFL-LDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
            +PNLP+ ++VYD DF   DD MG+AE D++P++E ++M L+ LP+GTII  I PSR NC
Sbjct: 64  TDPNLPLTLIVYDHDFFSKDDKMGDAEIDLKPYIEALRMELSGLPDGTIISTIGPSRGNC 123

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           L+EES I W N +++Q + LRLRNVE GE+E++L+WID+PGS+GL
Sbjct: 124 LAEESYIRWINDRIVQHICLRLRNVERGEVEIELQWIDLPGSKGL 168

[Close]

BLAST of Sed0028121 vs. ExPASy Swiss-Prot
Match: Q9LVH4 (Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=CAR4 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.7e-56
Identity = 100/165 (60.61%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           M++L+GL+RI + RGVNLAVRD+ SSDPYVV KMGKQKLKTRV+  ++NPEWNEDLTLS+
Sbjct: 13  MDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSV 72

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
            + NL V + VYD D F  DD MG+AEF+I+P++E ++M+L+ LP+GTI+  ++PSR NC
Sbjct: 73  TDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNC 132

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           L+EES + W +G+++Q + LRLR+VE GE+E QL+WID+PGS+GL
Sbjct: 133 LAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177

[Close]

BLAST of Sed0028121 vs. ExPASy Swiss-Prot
Match: Q9LP65 (Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana OX=3702 GN=CAR5 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.7e-56
Identity = 102/161 (63.35%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           M++L+GL+RI + RGVNLAVRD+ SSDPYVV KM KQKLKTRV+  N+NPEWNEDLTLS+
Sbjct: 37  MDSLLGLLRIRIKRGVNLAVRDLNSSDPYVVVKMAKQKLKTRVIYKNVNPEWNEDLTLSV 96

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
            +PNL V + VYD D F  DD MG+AEF I+PF+  +KM L++LP+GTI+  +QPSRDNC
Sbjct: 97  SDPNLTVLLTVYDYDTFTKDDKMGDAEFGIKPFVNALKMHLHDLPSGTIVTTVQPSRDNC 156

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPG 161
           L+EES +IW++G+++Q + LRLR+VE GE+E QL+WID+PG
Sbjct: 157 LAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQWIDLPG 197

[Close]

BLAST of Sed0028121 vs. ExPASy Swiss-Prot
Match: Q9C8Y2 (Protein C2-DOMAIN ABA-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=CAR2 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.5e-56
Identity = 103/164 (62.80%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MEN++GL+R+HV+RGVNLA+RD  SSDPYV+ +MGKQKL+TRV+K N+N EWNEDLTLS+
Sbjct: 1   MENMLGLLRLHVIRGVNLAIRDSQSSDPYVIVRMGKQKLRTRVMKKNLNTEWNEDLTLSV 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKM--RLNNLPNGTIIRKIQPSRD 120
            +P LPV ++VYDRD F  DD MG+A F I PF+E +++  +L  LP GT+I KIQ SR 
Sbjct: 61  TDPTLPVKIMVYDRDRFSRDDKMGDAIFHIDPFLEAIRIQNQLGGLPEGTVIMKIQASRQ 120

Query: 121 NCLSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGS 162
           NCLSEES I+W  G+++Q MFL+L+NVE GEIELQL+WID+ G+
Sbjct: 121 NCLSEESKIVWHKGKIVQNMFLKLQNVERGEIELQLEWIDVSGA 164

[Close]

BLAST of Sed0028121 vs. ExPASy TrEMBL
Match: A0A6J1CND3 (protein C2-DOMAIN ABA-RELATED 4-like OS=Momordica charantia OX=3673 GN=LOC111013183 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78
Identity = 147/165 (89.09%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV RGVNLAVRDVVSSDPYV+FKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRIHVYRGVNLAVRDVVSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+PNLPV +LVYD+D F LDD MG+AEFD+RPFME VKMRLNNLP+GTIIRKIQPSR+NC
Sbjct: 61  QDPNLPVYVLVYDKDLFSLDDKMGDAEFDVRPFMEAVKMRLNNLPSGTIIRKIQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCI+WANGQVIQKMFLRLRNVESGEIELQL+WIDIPGSRGL
Sbjct: 121 LSEESCIVWANGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165

[Close]

BLAST of Sed0028121 vs. ExPASy TrEMBL
Match: A0A1S3C5A6 (protein C2-DOMAIN ABA-RELATED 4-like OS=Cucumis melo OX=3656 GN=LOC103496820 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 145/165 (87.88%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV RGVNLAVRDV SSDPYV+FKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRIHVFRGVNLAVRDVCSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+P+LPVN+LVYD+D F LDD MG+AEFD+RPF+E VKMRLNNLP+GTIIRKIQPSR+NC
Sbjct: 61  QDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPSGTIIRKIQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCIIW NGQVIQKMFLRLRNVESGEIELQL+WIDIPGSRGL
Sbjct: 121 LSEESCIIWVNGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165

[Close]

BLAST of Sed0028121 vs. ExPASy TrEMBL
Match: A0A0A0L753 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G316280 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 145/165 (87.88%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV RGVNLAVRDV SSDPYV+FKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRIHVFRGVNLAVRDVSSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+P+LPVN+LVYD+D F LDD MG+AEFD+RPF+E VKMRLNNLP+GTIIRKIQPSR+NC
Sbjct: 61  QDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPSGTIIRKIQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCIIW NGQVIQKMFLRLRNVESGEIELQL+WIDIPGSRGL
Sbjct: 121 LSEESCIIWVNGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165

[Close]

BLAST of Sed0028121 vs. ExPASy TrEMBL
Match: A0A6J1IZN3 (protein C2-DOMAIN ABA-RELATED 1-like OS=Cucurbita maxima OX=3661 GN=LOC111482108 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.2e-76
Identity = 140/165 (84.85%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV RGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVK NINPEWNEDLTLSI
Sbjct: 1   MENLMGLLRIHVFRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKQNINPEWNEDLTLSI 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+PNLPV ++VYD+D F  DD MG+AEFD++PFME VKMRLNNLPNGTIIRK+QPSR+NC
Sbjct: 61  QDPNLPVYLIVYDKDKFSFDDRMGDAEFDVQPFMEAVKMRLNNLPNGTIIRKVQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCI+W NGQV Q+MFLRLRNVESGE+ELQL+WIDIPGSRG+
Sbjct: 121 LSEESCIVWGNGQVSQRMFLRLRNVESGEVELQLQWIDIPGSRGI 165

[Close]

BLAST of Sed0028121 vs. ExPASy TrEMBL
Match: A0A6J1F9H2 (protein C2-DOMAIN ABA-RELATED 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442041 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.2e-76
Identity = 139/165 (84.24%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENLMGL+RIHV +GVNLAVRDVVSSDPYVVFKMGKQKLKTRVVK NINPEWNEDLTLS+
Sbjct: 1   MENLMGLLRIHVFKGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKQNINPEWNEDLTLSV 60

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
           Q+PNLPV ++VYD+D F  DD MG+AEFD+RPFME VKMRLNNLPNGTIIRK+QPSR+NC
Sbjct: 61  QDPNLPVYLIVYDKDKFSFDDRMGDAEFDVRPFMEAVKMRLNNLPNGTIIRKVQPSRENC 120

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           LSEESCI+W NGQV Q+MFLRLRNVESGE+ELQL+WIDIPGSRG+
Sbjct: 121 LSEESCIVWGNGQVSQRMFLRLRNVESGEVELQLQWIDIPGSRGI 165

[Close]

BLAST of Sed0028121 vs. TAIR 10
Match: AT5G37740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 228.4 bits (581), Expect = 4.1e-60
Identity = 109/168 (64.88%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           MENL+GL+RIHV RGVNLA+RD+ SSDPY+V   GKQKLKTRVVKH++NPEWN+DLTLS+
Sbjct: 1   MENLVGLLRIHVKRGVNLAIRDISSSDPYIVVHCGKQKLKTRVVKHSVNPEWNDDLTLSV 60

Query: 61  QNPNLPVNMLVYDRDFL-LDDMMGNAEFDIRPFMEVVKMRLN---NLPNGTIIRKIQPSR 120
            +PNLP+ + VYD D L  DD MG AEF I PF+E +K        LPNGTII+KI+PSR
Sbjct: 61  TDPNLPIKLTVYDYDLLSADDKMGEAEFHIGPFIEAIKFAHQLGPGLPNGTIIKKIEPSR 120

Query: 121 DNCLSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
            NCLSE S I+   G+++Q MFLRL++VE GE+ELQL+WID+PGSRG+
Sbjct: 121 KNCLSESSHIVLNQGKIVQNMFLRLQHVECGEVELQLEWIDVPGSRGI 168

[Close]

BLAST of Sed0028121 vs. TAIR 10
Match: AT1G73580.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-58
Identity = 99/165 (60.00%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           M+NL+G++R+ V RGVNLAVRDV SSDPYVV K+G+QKLKT+VVK N+NP+W EDL+ ++
Sbjct: 4   MDNLLGILRVRVQRGVNLAVRDVSSSDPYVVLKLGRQKLKTKVVKQNVNPQWQEDLSFTV 63

Query: 61  QNPNLPVNMLVYDRDFL-LDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
            +PNLP+ ++VYD DF   DD MG+AE D++P++E ++M L+ LP+GTII  I PSR NC
Sbjct: 64  TDPNLPLTLIVYDHDFFSKDDKMGDAEIDLKPYIEALRMELSGLPDGTIISTIGPSRGNC 123

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           L+EES I W N +++Q + LRLRNVE GE+E++L+WID+PGS+GL
Sbjct: 124 LAEESYIRWINDRIVQHICLRLRNVERGEVEIELQWIDLPGSKGL 168

[Close]

BLAST of Sed0028121 vs. TAIR 10
Match: AT5G37740.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-57
Identity = 109/178 (61.24%), Postives = 135/178 (75.84%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQ----------KLKTRVVKHNINP 60
           MENL+GL+RIHV RGVNLA+RD+ SSDPY+V   GKQ          KLKTRVVKH++NP
Sbjct: 1   MENLVGLLRIHVKRGVNLAIRDISSSDPYIVVHCGKQNLMRLLNCWSKLKTRVVKHSVNP 60

Query: 61  EWNEDLTLSIQNPNLPVNMLVYDRDFL-LDDMMGNAEFDIRPFMEVVKMRLN---NLPNG 120
           EWN+DLTLS+ +PNLP+ + VYD D L  DD MG AEF I PF+E +K        LPNG
Sbjct: 61  EWNDDLTLSVTDPNLPIKLTVYDYDLLSADDKMGEAEFHIGPFIEAIKFAHQLGPGLPNG 120

Query: 121 TIIRKIQPSRDNCLSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPGSRGL 165
           TII+KI+PSR NCLSE S I+   G+++Q MFLRL++VE GE+ELQL+WID+PGSRG+
Sbjct: 121 TIIKKIEPSRKNCLSESSHIVLNQGKIVQNMFLRLQHVECGEVELQLEWIDVPGSRGI 178

[Close]

BLAST of Sed0028121 vs. TAIR 10
Match: AT1G48590.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 219.5 bits (558), Expect = 1.9e-57
Identity = 102/161 (63.35%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           M++L+GL+RI + RGVNLAVRD+ SSDPYVV KM KQKLKTRV+  N+NPEWNEDLTLS+
Sbjct: 6   MDSLLGLLRIRIKRGVNLAVRDLNSSDPYVVVKMAKQKLKTRVIYKNVNPEWNEDLTLSV 65

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
            +PNL V + VYD D F  DD MG+AEF I+PF+  +KM L++LP+GTI+  +QPSRDNC
Sbjct: 66  SDPNLTVLLTVYDYDTFTKDDKMGDAEFGIKPFVNALKMHLHDLPSGTIVTTVQPSRDNC 125

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPG 161
           L+EES +IW++G+++Q + LRLR+VE GE+E QL+WID+PG
Sbjct: 126 LAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQWIDLPG 166

[Close]

BLAST of Sed0028121 vs. TAIR 10
Match: AT1G48590.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 219.5 bits (558), Expect = 1.9e-57
Identity = 102/161 (63.35%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MENLMGLVRIHVLRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKHNINPEWNEDLTLSI 60
           M++L+GL+RI + RGVNLAVRD+ SSDPYVV KM KQKLKTRV+  N+NPEWNEDLTLS+
Sbjct: 37  MDSLLGLLRIRIKRGVNLAVRDLNSSDPYVVVKMAKQKLKTRVIYKNVNPEWNEDLTLSV 96

Query: 61  QNPNLPVNMLVYDRD-FLLDDMMGNAEFDIRPFMEVVKMRLNNLPNGTIIRKIQPSRDNC 120
            +PNL V + VYD D F  DD MG+AEF I+PF+  +KM L++LP+GTI+  +QPSRDNC
Sbjct: 97  SDPNLTVLLTVYDYDTFTKDDKMGDAEFGIKPFVNALKMHLHDLPSGTIVTTVQPSRDNC 156

Query: 121 LSEESCIIWANGQVIQKMFLRLRNVESGEIELQLKWIDIPG 161
           L+EES +IW++G+++Q + LRLR+VE GE+E QL+WID+PG
Sbjct: 157 LAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQWIDLPG 197

The following BLAST results are available for this feature:

BLAST of Sed0028121 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878147.1	4.1e-78	87.88	protein C2-DOMAIN ABA-RELATED 4-like [Benincasa hispida]	[more]
XP_022143275.1	4.1e-78	89.09	protein C2-DOMAIN ABA-RELATED 4-like [Momordica charantia]	[more]
XP_008457050.1	3.5e-77	87.88	PREDICTED: protein C2-DOMAIN ABA-RELATED 4-like [Cucumis melo]	[more]
XP_004145835.1	4.6e-77	87.88	protein C2-DOMAIN ABA-RELATED 4 [Cucumis sativus] >KGN57815.1 hypothetical prote...	[more]
KAG6581202.1	2.3e-76	85.45	Protein C2-DOMAIN ABA-RELATED 1, partial [Cucurbita argyrosperma subsp. sororia]...	[more]

BLAST of Sed0028121 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHP6	5.8e-59	64.88	Protein C2-DOMAIN ABA-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=CAR1 PE=1 SV=...	[more]
Q9C6B7	5.5e-57	60.00	Protein C2-DOMAIN ABA-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=CAR3 PE=3 SV=...	[more]
Q9LVH4	2.7e-56	60.61	Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=CAR4 PE=1 SV=...	[more]
Q9LP65	2.7e-56	63.35	Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana OX=3702 GN=CAR5 PE=2 SV=...	[more]
Q9C8Y2	3.5e-56	62.80	Protein C2-DOMAIN ABA-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=CAR2 PE=3 SV=...	[more]

BLAST of Sed0028121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CND3	2.0e-78	89.09	protein C2-DOMAIN ABA-RELATED 4-like OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A1S3C5A6	1.7e-77	87.88	protein C2-DOMAIN ABA-RELATED 4-like OS=Cucumis melo OX=3656 GN=LOC103496820 PE=...	[more]
A0A0A0L753	2.2e-77	87.88	C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G316280 PE=3 SV=...	[more]
A0A6J1IZN3	3.2e-76	84.85	protein C2-DOMAIN ABA-RELATED 1-like OS=Cucurbita maxima OX=3661 GN=LOC111482108...	[more]
A0A6J1F9H2	3.2e-76	84.24	protein C2-DOMAIN ABA-RELATED 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114420...	[more]

BLAST of Sed0028121 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37740.1	4.1e-60	64.88	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G73580.1	3.9e-58	60.00	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT5G37740.2	1.1e-57	61.24	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G48590.1	1.9e-57	63.35	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G48590.2	1.9e-57	63.35	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 7..101 e-value: 1.6E-13 score: 61.0
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 7..91 e-value: 2.3E-19 score: 69.6
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..105 score: 16.642782
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 4..159 e-value: 1.7E-24 score: 88.4
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 6..112
None	No IPR available	PANTHER	PTHR45933:SF39	PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE	coord: 1..163
None	No IPR available	CDD	cd04038	C2_ArfGAP	coord: 6..147 e-value: 5.2362E-73 score: 214.113
IPR044562	Protein C2-DOMAIN ABA-RELATED	PANTHER	PTHR45933	PROTEIN C2-DOMAIN ABA-RELATED 4	coord: 1..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028121.1	Sed0028121.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane