Sed0028081 (gene) Chayote v1

Overview


Name	Sed0028081
Type	gene
Organism	Sechium edule (Chayote v1)
Description	10 kDa chaperonin, mitochondrial-like
Location	LG03: 15652770 .. 15655642 (-)
RNA-Seq Expression	Sed0028081
Synteny	Sed0028081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGAGAATAAGTGATTTTACGAAACTACCCACATTGTAGATGCAAAATGAGTGTCGACCAATATCTATTCACGTAATTTAGCACCGAAGGCCGCAAAAACCCCTCTTTAAACCCTAAACCCTTGCTTGCAGGATTGTTCTTCATCGTTGATCTTAGGGTTTGGGCCGAGTTTCAATTTTCTCCAATTCCCTCCAATGGCGAAACGTTTGGCCCCATTGCTGAATCGCGTTCTGATCGAGAAGATTGTGCCCCCTGCCAAAACCAATTCCGGCATTTTGCTTCCCGAGAAGTCCACTAAGGTCAATCTTCCCATCCTCTCTTTCCCATTTCGATTCCTATGAATAAATTTTGTTGGCATTCCAGTCGCGCTTGGAATTTCGTTGTTTTTGACGGAGTTTCTTGGAATTTGCGACTCAGGATTCTGTCTCCAGTCATTTTCATTATTGGGTGTTCTTTTTTTTGTAGAGATGCTTTTCGTTTTGTTCTAGCTTGTTCTTGTTCAATAGGTACTTGATGTATGGTGTATGGTTTGTTTTGAAGCTGGCATATTGTTTGGTTTTTTAGCTTATTTTATGATTATCTAGCTAATTTTAATATTGTTCCTTCTTATTTCTTATTTAAAGAAGTCGTGCTTTATGATTCGGAAATGTGAATGTACCATTTTCATTTCTTCCTGATTTCAATGTTAGTCAGTTCAATCATATGATATGATATGATCATAACGACCCTTTTCTTGTTTTCCAATAGTGCGTTGTAACATATCGTTTAAGATTGAATGCTTGATATGGATGTAGATGTAGTTGATGAACTGTGTGTGTGGGTTTGACCAATCCAATCAATTTTTTTTAATATTCATGAATGTTCGGGTCATTTTACACTCACCTAAACTATTTTCTCTAGACAAATCGCTTGACCCTACTACATTTGGATATCAAAATTCTTTTTGTAGAAAATTATTTTATTGGTAGGTGACTACTATGGAGTGTTGATTGTCGATTTGTGGCCACCATGACTGTTGCAATCTTTATTATTGACAGAAATCTATCTTAGTTTAGTTGTATTTTTTGTGGATGAGATTTGCTGAATACCTGAGAAAACATTGTGTGGATTCTAGCTTGGTTTTTATTTAATCTTGCAGTCCCTCTATTAGGAAAAAAATTAGAATATATGTTTAAAGTTGGTGTGTCATTCAGCTACGTTACATAAAATTGGTAGTTCACTTTATCAAGTGGTCGAGTCCCAAAGGGGTGGCACAGTGGTTTGGTTGAAGGCTTGAGCTTTGAAGGTGAACTTCCCTCAAAGTTTCAAGTTCAAAAATCACTTGTGACATTAATTTGTAGCACCTCCTATGTCTCCATTCCTTCGATGTCTCCCGGTGCCTGGCCTAAGGACATGCGTGATTACCCTTGTTTAAAAAAAAAACTTTATCGAGTGGTTGAACTGACTTCTGTTCCTTATCTAGCTGAACTCTGGAAAAGTTATCTCCGTTGGTCCTGGGACTCGTGACAGAGAAGGAAATATTATTCCTGTTACTGTAAAGGAAGGTGACACCGTCCTCTTACCGGAATATGGAGGAACTGAAGTTAAGCTTGGAGAAAAACAGTATGTATTCTTCTTCTATTACTTTTCTTATTTTTGGCATTTCTGGTCTGTTGTTTGTTCAAGAATTTGGAATAGCCAGGAGATAAGAAATGCCTTCAGTGCTATTAGAGCCATTGCACCATATGGTTTAATAGTTACTGTGATCTTTATTTTAATGTTTGTTGCTGCTGAACTTGTATGCTGCTATCTTATCCAAAAAAAAAAACTTGCATGCTGCTGAACTTAAGAATCTTATGGCTGAACATTTGTTTAATATGAAGATATTAAGCTTATGTGGATAACCACTTTTTAAATCTCACCATGTTATGGTCAATTCATGTTTGTCTTTGATTTGTTAAGAAATGTCTTGTGGTTGTAACACCTCCTGTCTATGTTACTGATATTGTATTATTGCATAATAGGCAGCGGGTCTCAGCCATTTCAAAAATTAGTTTTTGATTGTTCTGATTGACAATGGTTTTGAGATAGAATAGGGATAACCAGTTACAAGGATTGGATGAGGCTGAGAGCCAACCTCAATATCTTTGGGGATTTAAAATATAATTATCTTTGACCTTTTGACTAGTTCAAATTTCAAATTCCACCAGAAGTTTAAGCAGGCCAAAATTTTAACTAGTTCTCTTTGTGTCTTAATTTCTGCTCCAAATTTTTGCTAACTCTGAGACTAACTAAAGGGATAATGAATATTTTTAACATGTAAATGACGGTTTTAAAAAAAAAGCATGTAAATGACTAAATTTAAACTTTCTAAATCATATGAACTAACAAAACAATGTTGCTGAGTACATTTTTTGTTTTCGAGTTCTAACATGTGAGGAGATTTGAATCATCTTTTAATCAAGTTATATGCCTTTGTCTAGTTGAGTTATTCATCAATTATTTAATCTGCATTAGACATTGTATCACGGTCAAATATTTCATCTTCATCTCTGTTTTCTTTTGCCCATCAGTTCAATCTCTAATCTGTAGTGAATAATCTGATTATCTGATTTCAGGTTTCACCTATTCCGCGACGAAGATCTATTAGGAACACTGCATGAATGATTGATTGATGTGAAAGTTGGAATGTTTTTCGGAAGTTGTTAGCTTCATGTTCCAGATATAGACGAGCTAGTTTGTGTTGCGAGACTTGTAAAACAGCTATTTTCATGTTGGTAGACACAGAATCTTGTAGGAGTTTTGGCCAAATTCAAATAATAGCTGTTTAGGCATTTCCAGTTATTAATAATTAATACGCTACTTCTTCTCAAAATCAGGTTTTGGATTGAAT

mRNA sequence

GTGGAGAATAAGTGATTTTACGAAACTACCCACATTGTAGATGCAAAATGAGTGTCGACCAATATCTATTCACGTAATTTAGCACCGAAGGCCGCAAAAACCCCTCTTTAAACCCTAAACCCTTGCTTGCAGGATTGTTCTTCATCGTTGATCTTAGGGTTTGGGCCGAGTTTCAATTTTCTCCAATTCCCTCCAATGGCGAAACGTTTGGCCCCATTGCTGAATCGCGTTCTGATCGAGAAGATTGTGCCCCCTGCCAAAACCAATTCCGGCATTTTGCTTCCCGAGAAGTCCACTAAGCTGAACTCTGGAAAAGTTATCTCCGTTGGTCCTGGGACTCGTGACAGAGAAGGAAATATTATTCCTGTTACTGTAAAGGAAGGTGACACCGTCCTCTTACCGGAATATGGAGGAACTGAAGTTAAGCTTGGAGAAAAACAGTTTCACCTATTCCGCGACGAAGATCTATTAGGAACACTGCATGAATGATTGATTGATGTGAAAGTTGGAATGTTTTTCGGAAGTTGTTAGCTTCATGTTCCAGATATAGACGAGCTAGTTTGTGTTGCGAGACTTGTAAAACAGCTATTTTCATGTTGGTAGACACAGAATCTTGTAGGAGTTTTGGCCAAATTCAAATAATAGCTGTTTAGGCATTTCCAGTTATTAATAATTAATACGCTACTTCTTCTCAAAATCAGGTTTTGGATTGAAT

Coding sequence (CDS)

ATGGCGAAACGTTTGGCCCCATTGCTGAATCGCGTTCTGATCGAGAAGATTGTGCCCCCTGCCAAAACCAATTCCGGCATTTTGCTTCCCGAGAAGTCCACTAAGCTGAACTCTGGAAAAGTTATCTCCGTTGGTCCTGGGACTCGTGACAGAGAAGGAAATATTATTCCTGTTACTGTAAAGGAAGGTGACACCGTCCTCTTACCGGAATATGGAGGAACTGAAGTTAAGCTTGGAGAAAAACAGTTTCACCTATTCCGCGACGAAGATCTATTAGGAACACTGCATGAATGA

Protein sequence

MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTVKEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE

Homology

[Close]

BLAST of Sed0028081 vs. NCBI nr
Match: XP_038881343.1 (10 kDa chaperonin, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPPAKTNSGILLPEKS+KLNSGKVIS+GPG RDREG IIPVTV
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISIGPGARDREGKIIPVTV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGTEVKLGEKQF+LFRDEDLLGTLHE
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Sed0028081 vs. NCBI nr
Match: XP_022966634.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 182.6 bits (462), Expect = 1.7e-42
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPPAKTNSGILLPEKS+KLNSGKVISVGPGTRDR+GNIIPV V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVIV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEG+TVLLPEYGGTEVKLGEKQF+LFRDEDLLGTLHE
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Sed0028081 vs. NCBI nr
Match: XP_022931931.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >XP_023517291.1 10 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6595428.1 10 kDa chaperonin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027431.1 10 kDa chaperonin, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.8 bits (460), Expect = 2.8e-42
Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPPAKTNSGILLPEKS+KLNSGKVISVGPGTRDR+GNIIPV V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEG+TVLLPEYGGTEVKLGEKQF+L+RDEDLLGTLHE
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE 97

[Close]

BLAST of Sed0028081 vs. NCBI nr
Match: XP_022154455.1 (10 kDa chaperonin, mitochondrial-like [Momordica charantia])

HSP 1 Score: 181.4 bits (459), Expect = 3.7e-42
Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPPAKTN+GILLPEKS+KLNSGKV+SVGPGTRDREGN+IPVTV
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGTEVKLG+KQ +LFRDEDLLGTLHE
Sbjct: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 97

[Close]

BLAST of Sed0028081 vs. NCBI nr
Match: XP_004144325.1 (10 kDa chaperonin, mitochondrial [Cucumis sativus] >KGN54688.1 hypothetical protein Csa_012132 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 4.5e-40
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPP KTNSGILLPEKSTKLNSGKVI+VGPG RDREG IIP++V
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGD VLLPEYGG EVKLGEKQF+LFRDEDLLGTLH+
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 97

[Close]

BLAST of Sed0028081 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.4e-38
Identity = 72/97 (74.23%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          M KRL P  NR+L+++++ PAKT SGILLPEKS+KLNSGKVI+VGPG+RD++G +IPV+V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGT+VKLGE ++HLFRDED+LGTLHE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Sed0028081 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.7e-38
Identity = 72/97 (74.23%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          M KRL P  NR+L++ ++ PAKT SGILLPEK++KLNSGKVI+VGPG+RD++G +IPV+V
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGT+VKLGEK++HLFRDED+LGTLHE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Sed0028081 vs. ExPASy Swiss-Prot
Match: O59804 (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hsp10 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19
Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 2   AKRLAPLLNRVLIEKIVPPAKTNSGILLPEKST-KLNSGKVISVGPGTRDREGNIIPVTV 61
           AK + PLL+R+L+++I    KT SGI LPEKS  KL+ G+VISVG G  ++EG +   +V
Sbjct: 8   AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62  KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
             GD VLLP YGG+ +K+GE+++ L+RD +LL  + E
Sbjct: 68  AVGDRVLLPAYGGSNIKVGEEEYSLYRDHELLAIIKE 104

[Close]

BLAST of Sed0028081 vs. ExPASy Swiss-Prot
Match: Q9W6X3 (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.6e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 3  KRLAPLLNRVLIEKIVPPAKTNSGILLPEKST-KLNSGKVISVGPGTRDREGNIIPVTVK 62
          ++  PL +RVL+E+++    T  GI+LPEKS  K+    V++VGPG+ +++G + P++VK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLG 94
           G+ VLLP+YGGT+V L +K + LFRD D+LG
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDYFLFRDADILG 95

[Close]

BLAST of Sed0028081 vs. ExPASy Swiss-Prot
Match: Q64433 (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-17
Identity = 46/92 (50.00%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 3  KRLAPLLNRVLIEKIVPPAKTNSGILLPEKST-KLNSGKVISVGPGTRDREGNIIPVTVK 62
          ++  PL +RVL+E+      T  GI+LPEKS  K+    V++VG G + + G I PV+VK
Sbjct: 7  RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVK 66

Query: 63 EGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLG 94
           GD VLLPEYGGT+V L +K + LFRD D+LG
Sbjct: 67 VGDKVLLPEYGGTKVVLDDKDYFLFRDSDILG 98

[Close]

BLAST of Sed0028081 vs. ExPASy TrEMBL
Match: A0A6J1HUD0 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111466260 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.0e-43
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPPAKTNSGILLPEKS+KLNSGKVISVGPGTRDR+GNIIPV V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVIV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEG+TVLLPEYGGTEVKLGEKQF+LFRDEDLLGTLHE
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Sed0028081 vs. ExPASy TrEMBL
Match: A0A6J1EUZ7 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438208 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPPAKTNSGILLPEKS+KLNSGKVISVGPGTRDR+GNIIPV V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEG+TVLLPEYGGTEVKLGEKQF+L+RDEDLLGTLHE
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE 97

[Close]

BLAST of Sed0028081 vs. ExPASy TrEMBL
Match: A0A6J1DJN1 (10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021728 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42
Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPPAKTN+GILLPEKS+KLNSGKV+SVGPGTRDREGN+IPVTV
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGTEVKLG+KQ +LFRDEDLLGTLHE
Sbjct: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 97

[Close]

BLAST of Sed0028081 vs. ExPASy TrEMBL
Match: A0A0A0KYT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G426760 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.2e-40
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPP KTNSGILLPEKSTKLNSGKVI+VGPG RDREG IIP++V
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGD VLLPEYGG EVKLGEKQF+LFRDEDLLGTLH+
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 97

[Close]

BLAST of Sed0028081 vs. ExPASy TrEMBL
Match: A0A1S3C2U3 (10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103495836 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL PLLNRVLIEKIVPP KTNSGILLPEKS+KLNSGKVI+VGPG RDREG IIP++V
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGD VLLPEYGG EVKLGEKQF+LFRDEDLLGTLHE
Sbjct: 61 KEGDIVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Sed0028081 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 )

HSP 1 Score: 158.7 bits (400), Expect = 2.4e-39
Identity = 72/97 (74.23%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          M KRL P  NR+L+++++ PAKT SGILLPEKS+KLNSGKVI+VGPG+RD++G +IPV+V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGT+VKLGE ++HLFRDED+LGTLHE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Sed0028081 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein )

HSP 1 Score: 156.0 bits (393), Expect = 1.5e-38
Identity = 74/97 (76.29%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLAPLLNRVLIEKIVPPAKTNSGILLPEKSTKLNSGKVISVGPGTRDREGNIIPVTV 60
          MAKRL P LNRVL+EKI+PP+KT SGILLPEKS++LNSG+VI+VGPG RDR GN+IPV+V
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQFHLFRDEDLLGTLHE 98
          KEGD VLLPE+GGT+VKLGEK+F L+RDED++ TLHE
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97

[Close]

BLAST of Sed0028081 vs. TAIR 10
Match: AT5G20720.1 (chaperonin 20 )

HSP 1 Score: 57.0 bits (136), Expect = 9.8e-09
Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 3   KRLAPLLNRVLIEKIVPPAKTNSGILLPEKS-TKLNSGKVISVGPGTRDREGNIIPVTVK 62
           K L PL +RV I+      KT  G+LL E +  K + G VI+VGPG+ D EG I P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTEVK 78
            G TVL  +Y G + K
Sbjct: 218 TGSTVLYSKYAGNDFK 233

[Close]

BLAST of Sed0028081 vs. TAIR 10
Match: AT5G20720.2 (chaperonin 20 )

HSP 1 Score: 57.0 bits (136), Expect = 9.8e-09
Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 3   KRLAPLLNRVLIEKIVPPAKTNSGILLPEKS-TKLNSGKVISVGPGTRDREGNIIPVTVK 62
           K L PL +RV I+      KT  G+LL E +  K + G VI+VGPG+ D EG I P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTEVK 78
            G TVL  +Y G + K
Sbjct: 218 TGSTVLYSKYAGNDFK 233

[Close]

BLAST of Sed0028081 vs. TAIR 10
Match: AT5G20720.3 (chaperonin 20 )

HSP 1 Score: 57.0 bits (136), Expect = 9.8e-09
Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 3   KRLAPLLNRVLIEKIVPPAKTNSGILLPEKS-TKLNSGKVISVGPGTRDREGNIIPVTVK 62
           K L PL +RV I+      KT  G+LL E +  K + G VI+VGPG+ D EG I P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTEVK 78
            G TVL  +Y G + K
Sbjct: 218 TGSTVLYSKYAGNDFK 233

The following BLAST results are available for this feature:

BLAST of Sed0028081 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881343.1	1.3e-42	93.81	10 kDa chaperonin, mitochondrial-like [Benincasa hispida]	[more]
XP_022966634.1	1.7e-42	93.81	10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]	[more]
XP_022931931.1	2.8e-42	92.78	10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >XP_023517291.1 10 kD...	[more]
XP_022154455.1	3.7e-42	91.75	10 kDa chaperonin, mitochondrial-like [Momordica charantia]	[more]
XP_004144325.1	4.5e-40	88.66	10 kDa chaperonin, mitochondrial [Cucumis sativus] >KGN54688.1 hypothetical prot...	[more]

BLAST of Sed0028081 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34893	3.4e-38	74.23	10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 S...	[more]
Q96539	5.7e-38	74.23	10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1	[more]
O59804	1.6e-19	49.48	10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
Q9W6X3	6.6e-18	46.74	10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=...	[more]
Q64433	1.1e-17	50.00	10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 ...	[more]

BLAST of Sed0028081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUD0	8.0e-43	93.81	10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC11146626...	[more]
A0A6J1EUZ7	1.4e-42	92.78	10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A6J1DJN1	1.8e-42	91.75	10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A0A0KYT6	2.2e-40	88.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G426760 PE=3 SV=1	[more]
A0A1S3C2U3	2.9e-40	88.66	10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103495836 PE=3 SV=1	[more]

BLAST of Sed0028081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14980.1	2.4e-39	74.23	chaperonin 10	[more]
AT1G23100.1	1.5e-38	76.29	GroES-like family protein	[more]
AT5G20720.1	9.8e-09	44.74	chaperonin 20	[more]
AT5G20720.2	9.8e-09	44.74	chaperonin 20	[more]
AT5G20720.3	9.8e-09	44.74	chaperonin 20	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 26..47 score: 35.27 coord: 61..73 score: 52.0 coord: 5..20 score: 31.38 coord: 82..95 score: 22.77
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..95 e-value: 1.5E-31 score: 120.8
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 5..94 e-value: 4.4E-24 score: 84.3
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..97
IPR020818	GroES chaperonin family	CDD	cd00320	cpn10	coord: 4..95 e-value: 4.78959E-33 score: 107.978
IPR037124	GroES chaperonin superfamily	GENE3D	2.30.33.40	GroES chaperonin	coord: 1..97 e-value: 1.3E-30 score: 107.6
None	No IPR available	PANTHER	PTHR10772:SF37	GROES-LIKE FAMILY PROTEIN	coord: 1..97
IPR018369	Chaperonin GroES, conserved site	PROSITE	PS00681	CHAPERONINS_CPN10	coord: 5..29
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 3..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028081.1	Sed0028081.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051085	chaperone cofactor-dependent protein refolding
biological_process	GO:0006457	protein folding
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051082	unfolded protein binding