Sed0028029 (gene) Chayote v1

Overview


Name	Sed0028029
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein disulfide-isomerase 5-1
Location	LG05: 39794976 .. 39799176 (-)
RNA-Seq Expression	Sed0028029
Synteny	Sed0028029

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATATATTTGTCTCTTTTTACGCTGTCCAGACCGACCGGGTTCATCGTCTCTGATATATACTGCGCACTCCGGCCATCGATATTTCCTTCAATTGAATTCACAGCAGAAGAGAAGATCCGGCCACCACATTCGATCAACCATGAGATTCCATATCTCATCTGTAATTTTTTCCTCTTTGTTAATCTCTCTTCTCGTTCTAAACACAGCACCGCTCTGCAAGGCTGAAGTTATAACCCTAACTGCGGACACCTTCTCCTACAAGGTACCATTTCCAAACCCTAATTTACGAATCGATGCCCATTTTGTAATTTTGATTGAAATTGATGGTGCGTGGTTGAATTCATTTGTTTTTGTGTATTTGAATTACTCTATGAGTTCCTTGGATTGGAGCGTTTGTCTGAGATTGGTATTGCGATTGTCAGCTGGGATACCACAGTTTTGGATCCGAACGAACGAATTGCGGGCGTTCGAAGAAAAAAGAAAATAGGATACAATTGCTCTGGATGGTCTATCTTTATTCTCAATTTTATTGAGTATTTCCAATCTCAAATGCAGTATAAACTAACCTTGGTCTTGGTTTTTGGTTGGATTTCGCTCAAAATGGGGCCAGCAGTTGAGAGCTTACTCGTGGGGATTGTACTTATTTGCTATGAAGATGTTGTCTCATTATCGTTTTATATTTTATGGTAGGTTGTTAAGCAGGACTTTGATTGGGTAGATTAAGTTCTAATCCTAGATTTAGTGACATTAATGAAACTGGTTAAGAATCGAGCGGGGTAGTGTCCATAGCTTGTGTGACTTGCCACACCCATTCGTCCATTTTATTGATAAAGGGCTGCGGGTCTTTTCCACTCATCCACCTATTAGCGCTGAATTGGGATGAATCGCTCCTGCCTCTATGCGAGCTCCAATGAAGTTTTCTCGGCATATGAGTTCTTTTCTCTTGGAGGATGTGTAGCTGAATAGTGAGATAATCTCTCAGATTTGCAAGTCCACCCTTTTTAGGATCTAAAGTTGGGCATTCAACTTCTTAAGAGTTTCAGTTTTGTATTAATGTGTCATCTTATTTTTTCTTCTGAAAGAAAGACGATGGCGACGGCCAGAATTGTTGTCATTTTCTTTTTAAAAAAACTTGGTTAAGAAGGGGCATAAATGGTTAGCAGTAAATGTTATAAGGTATAGAGGGAATGAATTCTTGCCGTGATGATTATAGGATTGTCATTAGGAATACTATTTGTATGTGGGCAATAAGTTGGGAGTTTTTATTCGAAATATTATAGAGGTATATGGAAAATTAGTTGGGAGTTAGTTAGAGTATTCTGGTTATAAGTAAGAGAAGGTTGTATGGGTGAAGGTAAGCAATTATATGGTGAATTCTTTTGTGCTTGAGAGGTTATTCTCAAGAGAGGAGTTCCAACGTTCAAGTACCTATCAACTACCGACAAGTTTGTATTTCTATAAAAAAAACGAAAAGCGTTTGAATTTCTTTTATACCTTCATATTAATAAAATTCGGATCCTATTAGATGACCACCTAATTAAGATTAATTTTCCATGAATTACTGTTGAATTATGTTAAATTACTAATCAACCCAAAAGTTTAAGTTGGTAGATTGACAGAAATTTAATTATATCAACCAACAATTACCTTAGCAATCGATTGTTCTGGGAGAACAATTGAGGTTGTTTATTAAGAGAGTTCATGATCAAGCTCTAGGTATTTCCAATTGTGGTTTATGTTTCTGTTGAGTAGCAGTTAGTTGTTAAGATTCGGTTTTACAGTTTATTTTTTTAACTGTATAAGTTTGTTAGTTATCTTGTTTTCGCATATGGCTATTTAAATGCCTCTCCTTTTTTTATTACAAATCAATGAAATTCATTCTCTTGCGCGATTATTATCTTTGTGTACTTCTCCATCACTGTAATTTAAATTGTTAGTTGATATCATCAAATAGCAGCCTATGTTTTAGGGTTGATTGATGATTTAATATGATTCAACATAATATTAGAGCAAGAAGCCATATGTCCAAACCATGTGGATTCGTTTCATCCCCAATTATTATTATTAGTTTTTAGATTTGTTGGGTATTCTTTAAATTCTCACCCCTACAAGTGGGGAGTGTAAGCTTAAACTTTTGAGTTCTAGAAGTGAGGGGAGTGTAAGCTTAAACTTCTGGGTTGATCGATAATTTAATATAATTCAATAGAGGTGCATGCAAGATGGCGTATACTTATGAAAAACTAAACTTCAACACTGTTAAAAGTTGTAAAAAATAATCTTGGAAGTTCTCATTTTTAGTGGGTGTGCAATTGGAAGCCTCACTCACAGTCATTTCTATGGTGTTGTCTGCTTACTGCTATAACTTTTCATTGACTATTGGTTAAATCAGCTTTCATCTCTGGCTTACGTAATGATTGGGCTTACAGCTTTGACCTTTGGCCTAGACAACACGCTGTCGGTGTCTTCCCTTTGATTTATACATTACATTATACAATAATGGATTCTTTATTTTGCTATGTATATCATCTAAAAATGGGTAGTCAAGGTTTCAAAATAACAGTACCAACCTTTGTCATGGACCTCATGGTGAATTCTTATTTCTTACTAAGATATGATTTCACGGTATACCTTTTAATACATTCCTCATTGTAGAAATTTGTATTTTTCAGATAAAGGAAAAAGATACCGCATGGTTTGTGAAGTTTTGCGTTCCTTGGTGCAAGCATTGGTTAGTATTCTTTCTTATCACAGTTTCCTTGTTTTTGTTCTGTCATTAATCCCAATTCTTATTGCCGGATTACTTGTATCTTAAATTGCAAATTTCAGCAAGAATTTAGGATCATTATGGGAGGACCTAGGCAAGACAATGGAAGGTGAGGATGAAATCGAGGTTGGAGAAGTTGATTGTGGTTCTCACAAATCAGTTTGTTCTAAAGTTGATATCCATTCATATCCTACATTTAAGCTTTTCTATGAAGGAGAGGAAGTTGCTAAGTATACAGGTGATTTCCTTTCTGTTTTGGCAGTTACATTGCTTTATTTTAGTTATCCTTATTGTGTACGATGTTCCATATTTTTCCTGATTTTGTTTCTACTTAATTTTGTAATTTATTGGCTAGCAATTTAAATAATGAAGCTTTTGTCGTTTATGTTTATTCTTCATCAGTCAGCATACAATTAAAGAATATCAAGTAATAGGTTCCAATTCTCCTCTATGTCTAAAGAATCGTGTTGAGCTTAATTCTGAGTTTTATTAAATGTTGCCAATTTACCTCCTACAAATTTTAGTGACTGGCAAGCTATGTAAACTCGTTAGATGGTATAACCTATGATATATGGACATGTCAGTTCACTCAACTATGTGTTTTAGTATTTTTTTTTTTTTTTTTTTGAGATTACAACAATTGAGAGTGGGGGGACTCAATCCAAGCACTTGGTCATTAGGTGCACACCGATGCCGTTGAGCTACTACTTTTGTTGGCATGTGATTTTAGTATTATTGATTTTAGTTTGTCAATATCGGAAATCAGAACGAATTGTCTCATTTCGTTGTTGCATATAGAGTATCTTACCGTAAAATTTATTTTTGGATTCGGACAAACCCCGACTTATCAGCTACAATTTGACATTGACCCAGGGCCAAAAAACGTTGAATCTCTCAAAAGCTTTGTTCTTGAAGAAGCTGAAAAGGCAGCAGAAAAAGTGCAGCAAGACAGTGATAAAGAATTGTGAAGAAAAAGATATAAGAACTGTGATCACATAGGTAGGGCAAACTTTTAACTTATTCAGAGAAGTTCTCTTTACCCATTCCATTGAAGAGATTTGATAAACATATTTGATTTAGGCAATGAAATTGACTTCTTTCAATGCAGTGTTGGGCTATAAACACTTGAAGCTCTCGGCATCTAGAAACAATGAAACTAGTTGTTCATGAACAAGATCATTGATAATCATAGTCCTTTTTGCACTGTGATTAGAATGCTTAAATTTGGATAGCTTTTGTACGGTGATCTAAGTAACATTGTTTTCTCTTCCTTATGTTTAGACTTTTACCCCACGTTTTGCTCACTGTTTATGGCTGCCTTTTAGTTTTGGTTGGGATTTGTGAAAGAGAAGCAACATATTGGATTTAGATCATTGATTAATGTTAGGTTTTGATTTTATATATTGAATACATTGAATATAGACTTTTTATTTG

mRNA sequence

AAAATATATTTGTCTCTTTTTACGCTGTCCAGACCGACCGGGTTCATCGTCTCTGATATATACTGCGCACTCCGGCCATCGATATTTCCTTCAATTGAATTCACAGCAGAAGAGAAGATCCGGCCACCACATTCGATCAACCATGAGATTCCATATCTCATCTGTAATTTTTTCCTCTTTGTTAATCTCTCTTCTCGTTCTAAACACAGCACCGCTCTGCAAGGCTGAAGTTATAACCCTAACTGCGGACACCTTCTCCTACAAGATAAAGGAAAAAGATACCGCATGGTTTGTGAAGTTTTGCGTTCCTTGGTGCAAGCATTGCAAGAATTTAGGATCATTATGGGAGGACCTAGGCAAGACAATGGAAGGTGAGGATGAAATCGAGGTTGGAGAAGTTGATTGTGGTTCTCACAAATCAGTTTGTTCTAAAGTTGATATCCATTCATATCCTACATTTAAGCTTTTCTATGAAGGAGAGGAAGTTGCTAAGTATACAGGGCCAAAAAACGTTGAATCTCTCAAAAGCTTTGTTCTTGAAGAAGCTGAAAAGGCAGCAGAAAAAGTGCAGCAAGACAGTGATAAAGAATTGTGAAGAAAAAGATATAAGAACTGTGATCACATAGTGTTGGGCTATAAACACTTGAAGCTCTCGGCATCTAGAAACAATGAAACTAGTTGTTCATGAACAAGATCATTGATAATCATAGTCCTTTTTGCACTGTGATTAGAATGCTTAAATTTGGATAGCTTTTGTACGGTGATCTAAGTAACATTGTTTTCTCTTCCTTATGTTTAGACTTTTACCCCACGTTTTGCTCACTGTTTATGGCTGCCTTTTAGTTTTGGTTGGGATTTGTGAAAGAGAAGCAACATATTGGATTTAGATCATTGATTAATGTTAGGTTTTGATTTTATATATTGAATACATTGAATATAGACTTTTTATTTG

Coding sequence (CDS)

ATGAGATTCCATATCTCATCTGTAATTTTTTCCTCTTTGTTAATCTCTCTTCTCGTTCTAAACACAGCACCGCTCTGCAAGGCTGAAGTTATAACCCTAACTGCGGACACCTTCTCCTACAAGATAAAGGAAAAAGATACCGCATGGTTTGTGAAGTTTTGCGTTCCTTGGTGCAAGCATTGCAAGAATTTAGGATCATTATGGGAGGACCTAGGCAAGACAATGGAAGGTGAGGATGAAATCGAGGTTGGAGAAGTTGATTGTGGTTCTCACAAATCAGTTTGTTCTAAAGTTGATATCCATTCATATCCTACATTTAAGCTTTTCTATGAAGGAGAGGAAGTTGCTAAGTATACAGGGCCAAAAAACGTTGAATCTCTCAAAAGCTTTGTTCTTGAAGAAGCTGAAAAGGCAGCAGAAAAAGTGCAGCAAGACAGTGATAAAGAATTGTGA

Protein sequence

MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKSFVLEEAEKAAEKVQQDSDKEL

Homology

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BLAST of Sed0028029 vs. NCBI nr
Match: XP_038900624.1 (protein disulfide-isomerase 5-1 [Benincasa hispida] >XP_038900625.1 protein disulfide-isomerase 5-1 [Benincasa hispida] >XP_038900626.1 protein disulfide-isomerase 5-1 [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 5.0e-70
Identity = 134/150 (89.33%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           MRFHISS IF SLLISLL+LNTA LC+AEV+TLTADTFS K+KEKDTAWFVKFCVPWCKH
Sbjct: 1   MRFHISSAIFPSLLISLLLLNTASLCRAEVLTLTADTFSDKVKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWEDLGK MEGEDEIEVGEVDCGS+K VCSKVDIHSYPTFKLFYEGEEVAKYTG
Sbjct: 61  CKNLGSLWEDLGKAMEGEDEIEVGEVDCGSNKPVCSKVDIHSYPTFKLFYEGEEVAKYTG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESLK+FVLEEAEKAAEK +QDSDKEL
Sbjct: 121 PRDVESLKTFVLEEAEKAAEKAEQDSDKEL 150

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BLAST of Sed0028029 vs. NCBI nr
Match: XP_022947942.1 (protein disulfide-isomerase 5-1 [Cucurbita moschata])

HSP 1 Score: 273.9 bits (699), Expect = 8.4e-70
Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           M+FHISS I S LLISL+VLNTA LCK+EVITLTADTFS K+KEKDTAWFVKFCVPWCKH
Sbjct: 1   MKFHISSAILSFLLISLIVLNTASLCKSEVITLTADTFSDKVKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKY G
Sbjct: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYKG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESLKSFVLEEAEKA EK QQDS KEL
Sbjct: 121 PRDVESLKSFVLEEAEKAVEKAQQDSAKEL 150

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BLAST of Sed0028029 vs. NCBI nr
Match: KAG6605525.1 (Protein disulfide-isomerase 5-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69
Identity = 134/150 (89.33%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           M+FHISS I S LLIS +VLNTA LCK+EVITLTADTFS K+KEKDTAWFVKFCVPWCKH
Sbjct: 1   MKFHISSAILSFLLISFIVLNTASLCKSEVITLTADTFSDKVKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKY G
Sbjct: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYKG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESLKSFVLEEAEKA EK QQDS KEL
Sbjct: 121 PRDVESLKSFVLEEAEKAVEKAQQDSAKEL 150

[Close]

BLAST of Sed0028029 vs. NCBI nr
Match: XP_023007347.1 (protein disulfide-isomerase 5-1 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 3.2e-69
Identity = 133/150 (88.67%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           M+FHISS I S LLISL++LNTA LCK+EVITLTADTFS K+KEKDTAWFVKFCVPWCKH
Sbjct: 1   MKFHISSAILSFLLISLILLNTASLCKSEVITLTADTFSDKVKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWED+GKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKY G
Sbjct: 61  CKNLGSLWEDMGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYKG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESLKSFVLEEAEKA EK QQDS KEL
Sbjct: 121 PRDVESLKSFVLEEAEKAVEKAQQDSAKEL 150

[Close]

BLAST of Sed0028029 vs. NCBI nr
Match: XP_023532319.1 (protein disulfide-isomerase 5-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 4.2e-69
Identity = 134/150 (89.33%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           M+FHISS I S LLI L+VLNTA LCK+EVITLTADTFS K+KEKDTAWFVKFCVPWCKH
Sbjct: 1   MKFHISSAILSFLLIFLIVLNTASLCKSEVITLTADTFSDKVKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKY G
Sbjct: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYKG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESLKSFVLEEAEKA EK QQDS KEL
Sbjct: 121 PRDVESLKSFVLEEAEKAVEKAQQDSAKEL 150

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BLAST of Sed0028029 vs. ExPASy Swiss-Prot
Match: Q8GYD1 (Protein disulfide-isomerase 5-1 OS=Arabidopsis thaliana OX=3702 GN=PDIL5-1 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.8e-52
Identity = 101/137 (73.72%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 14  LISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGK 73
           +I LL+     L KAEVITLT +TFS KIKEKDTAWFVKFCVPWCKHCK LG+LWEDLGK
Sbjct: 11  MIILLLFIPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGK 70

Query: 74  TMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKSFVLE 133
            MEG+DEIEVGEVDCG+ ++VC+KV+IHSYPTF LFY GEEV+KY G ++VESLK+FV+E
Sbjct: 71  AMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVE 130

Query: 134 EAEKAAEKVQQDSDKEL 151
           E EKAAEK Q + DKEL
Sbjct: 131 ETEKAAEKAQLE-DKEL 146

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BLAST of Sed0028029 vs. ExPASy Swiss-Prot
Match: Q10N04 (Protein disulfide isomerase-like 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PDIL5-1 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.3e-52
Identity = 101/137 (73.72%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 13  LLISLLVLNTAPLCK---AEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWE 72
           LL++L ++    L     AEVITLT +TFS KIKEKDT WFVKFCVPWCKHCKNLG+LWE
Sbjct: 11  LLVALALVVLVALAARSGAEVITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWE 70

Query: 73  DLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKS 132
           DLGK MEG DEIE+G+VDCG  K VCSKVDIHSYPTFK+FYEGEEVAKY GP+NVESLK+
Sbjct: 71  DLGKVMEGADEIEIGQVDCGVSKPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKN 130

Query: 133 FVLEEAEKAAEKVQQDS 147
           FV +EAEKA E   QDS
Sbjct: 131 FVSDEAEKAGEAKLQDS 147

[Close]

BLAST of Sed0028029 vs. ExPASy Swiss-Prot
Match: Q91W90 (Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 8.3e-20
Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 27  KAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWEDLG-KTMEGEDEIEVGE 86
           K  V+ LT  +F   I +  T  FVKF  PWC HCKNL   WE+L  K   G  ++ + E
Sbjct: 306 KGTVLALTEKSFEDTIAQGIT--FVKFYAPWCGHCKNLAPTWEELSKKEFPGLSDVTIAE 365

Query: 87  VDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKSFVLEEAE 137
           VDC + ++VCSK  +  YPT  LF  GE+V ++ G ++++SL SFVL +A+
Sbjct: 366 VDCTAERNVCSKYSVRGYPTLLLFRGGEKVGEHNGGRDLDSLHSFVLRQAK 414

[Close]

BLAST of Sed0028029 vs. ExPASy Swiss-Prot
Match: Q8NBS9 (Thioredoxin domain-containing protein 5 OS=Homo sapiens OX=9606 GN=TXNDC5 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 3.9e-17
Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 22  TAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKTMEGEDEI 81
           +AP  K  +  L+A  F   + + D   F+KF  PWC HCK L   WE L   +E  + +
Sbjct: 183 SAPELKQGLYELSASNFELHVAQGD--HFIKFFAPWCGHCKALAPTWEQLALGLEHSETV 242

Query: 82  EVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKSFVLEEAEK 138
           ++G+VDC  H  +CS   +  YPT   F +G++V +Y G +++ESL+ +V  + ++
Sbjct: 243 KIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLESLREYVESQLQR 296

[Close]

BLAST of Sed0028029 vs. ExPASy Swiss-Prot
Match: Q9VYV3 (Thioredoxin domain-containing protein 5 homolog OS=Drosophila melanogaster OX=7227 GN=prtp PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 2.5e-16
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 29  EVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKTMEGEDEIEVGEVDC 88
           +V+ LT DTF+  +   +   FVKF  PWC HC+ L   WEDL K +  E  + + ++DC
Sbjct: 167 KVVDLTEDTFAKHVSTGN--HFVKFFAPWCSHCQRLAPTWEDLAKELIKEPTVTISKIDC 226

Query: 89  GSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKSFVLEEAEKAAEKVQQDSDK 148
              +S+C   ++  YPT     +G+++ KY+G +++ +LK++V +      EK   ++  
Sbjct: 227 TQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGARDLSTLKTYVEKMVGVPLEKTAGEAGD 285

Query: 149 E 150
           E
Sbjct: 287 E 285

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BLAST of Sed0028029 vs. ExPASy TrEMBL
Match: A0A6J1G7T1 (protein disulfide-isomerase 5-1 OS=Cucurbita moschata OX=3662 GN=LOC111451672 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70
Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           M+FHISS I S LLISL+VLNTA LCK+EVITLTADTFS K+KEKDTAWFVKFCVPWCKH
Sbjct: 1   MKFHISSAILSFLLISLIVLNTASLCKSEVITLTADTFSDKVKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKY G
Sbjct: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYKG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESLKSFVLEEAEKA EK QQDS KEL
Sbjct: 121 PRDVESLKSFVLEEAEKAVEKAQQDSAKEL 150

[Close]

BLAST of Sed0028029 vs. ExPASy TrEMBL
Match: A0A6J1KYF6 (protein disulfide-isomerase 5-1 OS=Cucurbita maxima OX=3661 GN=LOC111499869 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 133/150 (88.67%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           M+FHISS I S LLISL++LNTA LCK+EVITLTADTFS K+KEKDTAWFVKFCVPWCKH
Sbjct: 1   MKFHISSAILSFLLISLILLNTASLCKSEVITLTADTFSDKVKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWED+GKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKY G
Sbjct: 61  CKNLGSLWEDMGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYKG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESLKSFVLEEAEKA EK QQDS KEL
Sbjct: 121 PRDVESLKSFVLEEAEKAVEKAQQDSAKEL 150

[Close]

BLAST of Sed0028029 vs. ExPASy TrEMBL
Match: A0A6J1CGL4 (protein disulfide isomerase-like 5-1 OS=Momordica charantia OX=3673 GN=LOC111011347 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.5e-67
Identity = 131/150 (87.33%), Postives = 138/150 (92.00%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           MRFHI S IF  LLIS+LVLNTA LC+AEVITLTADTFS K+KEKDTAWFVKFCVPWCKH
Sbjct: 1   MRFHILSAIFPLLLISVLVLNTASLCRAEVITLTADTFSDKVKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWEDLGK MEGEDEIEVGEVDC  +K VCSKVDIHSYPTFKLFYEGEEVAKY+G
Sbjct: 61  CKNLGSLWEDLGKAMEGEDEIEVGEVDCSLNKPVCSKVDIHSYPTFKLFYEGEEVAKYSG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESLKSFVLEEAEKA EKVQQDSD EL
Sbjct: 121 PRDVESLKSFVLEEAEKAEEKVQQDSDNEL 150

[Close]

BLAST of Sed0028029 vs. ExPASy TrEMBL
Match: A0A0A0KFX1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290880 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.0e-66
Identity = 128/150 (85.33%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           MRFHISS IF  L ISLL+LNTA L +AEV+TLTADTFS KIKEKDTAWFVKFCVPWCKH
Sbjct: 1   MRFHISSAIFPFLFISLLLLNTASLYRAEVLTLTADTFSDKIKEKDTAWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWEDLGK MEGEDEIEVGEVDCGS+K VCSKVDIHSYPTFKLFYEGEEVAKY G
Sbjct: 61  CKNLGSLWEDLGKAMEGEDEIEVGEVDCGSNKPVCSKVDIHSYPTFKLFYEGEEVAKYKG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESL+ F LEE+EKAAEK +QDSDKEL
Sbjct: 121 PRDVESLRIFALEESEKAAEKAEQDSDKEL 150

[Close]

BLAST of Sed0028029 vs. ExPASy TrEMBL
Match: A0A1S3CKB7 (protein disulfide-isomerase 5-1 OS=Cucumis melo OX=3656 GN=LOC103501930 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.7e-64
Identity = 125/150 (83.33%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MRFHISSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKH 60
           MRFHISS IF  L ISLL+LNTA L +AEV+TLTADTFS KIKEKDT WFVKFCVPWCKH
Sbjct: 1   MRFHISSPIFPFLFISLLLLNTASLHRAEVLTLTADTFSDKIKEKDTVWFVKFCVPWCKH 60

Query: 61  CKNLGSLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTG 120
           CKNLGSLWEDLGK MEGEDEIEVGEVDCGS+K VCSKVDIHSYPTFKLFYEGEEVAKY G
Sbjct: 61  CKNLGSLWEDLGKAMEGEDEIEVGEVDCGSNKPVCSKVDIHSYPTFKLFYEGEEVAKYKG 120

Query: 121 PKNVESLKSFVLEEAEKAAEKVQQDSDKEL 151
           P++VESL+ F LEE+EKAA K ++DSDKEL
Sbjct: 121 PRDVESLRIFALEESEKAAAKAEEDSDKEL 150

[Close]

BLAST of Sed0028029 vs. TAIR 10
Match: AT1G07960.2 (PDI-like 5-1 )

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-53
Identity = 101/137 (73.72%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 14  LISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGK 73
           +I LL+     L KAEVITLT +TFS KIKEKDTAWFVKFCVPWCKHCK LG+LWEDLGK
Sbjct: 11  MIILLLFIPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGK 70

Query: 74  TMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKSFVLE 133
            MEG+DEIEVGEVDCG+ ++VC+KV+IHSYPTF LFY GEEV+KY G ++VESLK+FV+E
Sbjct: 71  AMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVE 130

Query: 134 EAEKAAEKVQQDSDKEL 151
           E EKAAEK Q + DKEL
Sbjct: 131 ETEKAAEKAQLE-DKEL 146

[Close]

BLAST of Sed0028029 vs. TAIR 10
Match: AT1G07960.3 (PDI-like 5-1 )

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-53
Identity = 101/137 (73.72%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 14  LISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGK 73
           +I LL+     L KAEVITLT +TFS KIKEKDTAWFVKFCVPWCKHCK LG+LWEDLGK
Sbjct: 11  MIILLLFIPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGK 70

Query: 74  TMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKSFVLE 133
            MEG+DEIEVGEVDCG+ ++VC+KV+IHSYPTF LFY GEEV+KY G ++VESLK+FV+E
Sbjct: 71  AMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVE 130

Query: 134 EAEKAAEKVQQDSDKEL 151
           E EKAAEK Q + DKEL
Sbjct: 131 ETEKAAEKAQLE-DKEL 146

[Close]

BLAST of Sed0028029 vs. TAIR 10
Match: AT1G07960.1 (PDI-like 5-1 )

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-53
Identity = 101/137 (73.72%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 14  LISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGK 73
           +I LL+     L KAEVITLT +TFS KIKEKDTAWFVKFCVPWCKHCK LG+LWEDLGK
Sbjct: 11  MIILLLFIPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGK 70

Query: 74  TMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGEEVAKYTGPKNVESLKSFVLE 133
            MEG+DEIEVGEVDCG+ ++VC+KV+IHSYPTF LFY GEEV+KY G ++VESLK+FV+E
Sbjct: 71  AMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVE 130

Query: 134 EAEKAAEKVQQDSDKEL 151
           E EKAAEK Q + DKEL
Sbjct: 131 ETEKAAEKAQLE-DKEL 146

[Close]

BLAST of Sed0028029 vs. TAIR 10
Match: AT2G47470.2 (thioredoxin family protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17
Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 6   SSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLG 65
           S + F   L++LL+++       +V+ LT D+F  ++  KD    V+F  PWC HCK L 
Sbjct: 4   SQIWFGFALLALLLVSAV---ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLA 63

Query: 66  SLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGE-EVAKYTGPKNV 125
             +E LG + +    + + +VDC   KSVC+K  +  YPT + F +G  E  KY GP+N 
Sbjct: 64  PEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNA 123

Query: 126 ESLKSFVLEE 135
           E+L  +V +E
Sbjct: 124 EALAEYVNKE 129

[Close]

BLAST of Sed0028029 vs. TAIR 10
Match: AT2G47470.1 (thioredoxin family protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17
Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 6   SSVIFSSLLISLLVLNTAPLCKAEVITLTADTFSYKIKEKDTAWFVKFCVPWCKHCKNLG 65
           S + F   L++LL+++       +V+ LT D+F  ++  KD    V+F  PWC HCK L 
Sbjct: 4   SQIWFGFALLALLLVSAV---ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLA 63

Query: 66  SLWEDLGKTMEGEDEIEVGEVDCGSHKSVCSKVDIHSYPTFKLFYEGE-EVAKYTGPKNV 125
             +E LG + +    + + +VDC   KSVC+K  +  YPT + F +G  E  KY GP+N 
Sbjct: 64  PEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNA 123

Query: 126 ESLKSFVLEE 135
           E+L  +V +E
Sbjct: 124 EALAEYVNKE 129

The following BLAST results are available for this feature:

BLAST of Sed0028029 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900624.1	5.0e-70	89.33	protein disulfide-isomerase 5-1 [Benincasa hispida] >XP_038900625.1 protein disu...	[more]
XP_022947942.1	8.4e-70	90.00	protein disulfide-isomerase 5-1 [Cucurbita moschata]	[more]
KAG6605525.1	2.5e-69	89.33	Protein disulfide-isomerase 5-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023007347.1	3.2e-69	88.67	protein disulfide-isomerase 5-1 [Cucurbita maxima]	[more]
XP_023532319.1	4.2e-69	89.33	protein disulfide-isomerase 5-1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0028029 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYD1	2.8e-52	73.72	Protein disulfide-isomerase 5-1 OS=Arabidopsis thaliana OX=3702 GN=PDIL5-1 PE=2 ...	[more]
Q10N04	6.3e-52	73.72	Protein disulfide isomerase-like 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q91W90	8.3e-20	43.24	Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 ...	[more]
Q8NBS9	3.9e-17	34.48	Thioredoxin domain-containing protein 5 OS=Homo sapiens OX=9606 GN=TXNDC5 PE=1 S...	[more]
Q9VYV3	2.5e-16	32.23	Thioredoxin domain-containing protein 5 homolog OS=Drosophila melanogaster OX=72...	[more]

BLAST of Sed0028029 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7T1	4.1e-70	90.00	protein disulfide-isomerase 5-1 OS=Cucurbita moschata OX=3662 GN=LOC111451672 PE...	[more]
A0A6J1KYF6	1.6e-69	88.67	protein disulfide-isomerase 5-1 OS=Cucurbita maxima OX=3661 GN=LOC111499869 PE=4...	[more]
A0A6J1CGL4	2.5e-67	87.33	protein disulfide isomerase-like 5-1 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A0A0KFX1	8.0e-66	85.33	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290880...	[more]
A0A1S3CKB7	5.7e-64	83.33	protein disulfide-isomerase 5-1 OS=Cucumis melo OX=3656 GN=LOC103501930 PE=4 SV=...	[more]

BLAST of Sed0028029 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07960.2	2.0e-53	73.72	PDI-like 5-1	[more]
AT1G07960.3	2.0e-53	73.72	PDI-like 5-1	[more]
AT1G07960.1	2.0e-53	73.72	PDI-like 5-1	[more]
AT2G47470.2	2.3e-17	36.15	thioredoxin family protein	[more]
AT2G47470.1	2.3e-17	36.15	thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..150
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 25..150 e-value: 3.7E-31 score: 110.2
None	No IPR available	PANTHER	PTHR45672	PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED	coord: 17..145
None	No IPR available	PANTHER	PTHR45672:SF3	THIOREDOXIN DOMAIN-CONTAINING PROTEIN 5	coord: 17..145
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 30..131 e-value: 3.7E-24 score: 84.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 17..136 score: 10.833963
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 25..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028029.1	Sed0028029.1	mRNA
Sed0028029.2	Sed0028029.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016853	isomerase activity