Sed0028023 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTCGCTATAAATTCTCTCACAAACTTCATCATTCTCCTCATTTTTGTTCCATCCAAAACCATAAGATTCCTTTCCTTTCATTGTCTTTTATTTCCCTTTCTCTTTCTGTCTCTCTTTCTCTCAATAAATACCTCCACATAAATCCCACCCTTCTCTTTTAATTTCCCCTCACCCTTTTTGTAACCTAAAGGAAAAGAAGAATATGGCCAATGAAGAGGGAAATAGCAACAATCCTAACTCAACCAACAACCTTAGAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTCTCTCAGCTCAACATCCACTGCTGGCCAAAGTAAGTATACCACGATTCCGTCTATCGATTTAAGCTTTTGAGTTCGGTTCCATAATAATTGCTTAACTTTTTTAGATGGGGTTGTTCCAAACACACTATAATCCATCCATTTAAACTTTTGGGTTGGGTATGCTGTCACTTATTAGTTTAAGCTTTTGAGCTCTCGATCGGGTGATAATTAGCTGCTTTTATTTACATGGGGTTGTTTGAAATAATCTATCCACTTAAACTTTTGTGTTCGATGGGATATGATTTAGAACACTCTAATCTATCGGTTTAAGCTTTCGTGTGTTAGATGGGGGTGTTCGGCGGGGAAATACCAACTGAAATTTGAGGCGGAAGAGACATGCTATTTGGTGAAGGGAAAAGTGAAGGCTTATGCAAAAGGATCAGCTGATTCTGAATACACTGAGTTTGGGGCTGGCGATTTGGTCACTATTCCTAAAGGACTTAGCTGCACTTGGGATGTTTCTGTTGCTGTTGATAAGTTCTACAAGTTTGAGTCTCAATCTTAAATCCAATCTTTTCTTTTTATTTTCTTATAATTAGTCCCTCTAATTTACCTTCTATTTCTTTCTTTCCCTTTTCTTTTTCTGTAAATATATTCTTCTTTTCCTCTATCTCTAAAATGGGAGAGAGAAGGGTTGGAG AGTCGCTATAAATTCTCTCACAAACTTCATCATTCTCCTCATTTTTGTTCCATCCAAAACCATAAGATTCCTTTCCTTTCATTGTCTTTTATTTCCCTTTCTCTTTCTGTCTCTCTTTCTCTCAATAAATACCTCCACATAAATCCCACCCTTCTCTTTTAATTTCCCCTCACCCTTTTTGTAACCTAAAGGAAAAGAAGAATATGGCCAATGAAGAGGGAAATAGCAACAATCCTAACTCAACCAACAACCTTAGAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTCTCTCAGCTCAACATCCACTGCTGGCCAAAATGGGGGTGTTCGGCGGGGAAATACCAACTGAAATTTGAGGCGGAAGAGACATGCTATTTGGTGAAGGGAAAAGTGAAGGCTTATGCAAAAGGATCAGCTGATTCTGAATACACTGAGTTTGGGGCTGGCGATTTGGTCACTATTCCTAAAGGACTTAGCTGCACTTGGGATGTTTCTGTTGCTGTTGATAAGTTCTACAAGTTTGAGTCTCAATCTTAAATCCAATCTTTTCTTTTTATTTTCTTATAATTAGTCCCTCTAATTTACCTTCTATTTCTTTCTTTCCCTTTTCTTTTTCTGTAAATATATTCTTCTTTTCCTCTATCTCTAAAATGGGAGAGAGAAGGGTTGGAG ATGGCCAATGAAGAGGGAAATAGCAACAATCCTAACTCAACCAACAACCTTAGAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTCTCTCAGCTCAACATCCACTGCTGGCCAAAATGGGGGTGTTCGGCGGGGAAATACCAACTGAAATTTGAGGCGGAAGAGACATGCTATTTGGTGAAGGGAAAAGTGAAGGCTTATGCAAAAGGATCAGCTGATTCTGAATACACTGAGTTTGGGGCTGGCGATTTGGTCACTATTCCTAAAGGACTTAGCTGCACTTGGGATGTTTCTGTTGCTGTTGATAAGTTCTACAAGTTTGAGTCTCAATCTTAA MANEEGNSNNPNSTNNLRIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYAKGSADSEYTEFGAGDLVTIPKGLSCTWDVSVAVDKFYKFESQS Homology
BLAST of Sed0028023 vs. NCBI nr
Match: KAG7025258.1 (hypothetical protein SDJN02_11753 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51 Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Sed0028023 vs. NCBI nr
Match: KAG6592849.1 (hypothetical protein SDJN03_12325, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51 Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Sed0028023 vs. NCBI nr
Match: XP_022960185.1 (uncharacterized protein LOC111460998 [Cucurbita moschata] >XP_022960186.1 uncharacterized protein LOC111460998 [Cucurbita moschata] >XP_023513548.1 uncharacterized protein LOC111778119 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.6 bits (540), Expect = 1.7e-51 Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Sed0028023 vs. NCBI nr
Match: XP_023005099.1 (uncharacterized protein LOC111498188 [Cucurbita maxima] >XP_023005100.1 uncharacterized protein LOC111498188 [Cucurbita maxima] >XP_023005101.1 uncharacterized protein LOC111498188 [Cucurbita maxima]) HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51 Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Sed0028023 vs. NCBI nr
Match: XP_038906875.1 (uncharacterized protein LOC120092760 [Benincasa hispida]) HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46 Identity = 97/116 (83.62%), Postives = 102/116 (87.93%), Query Frame = 0
BLAST of Sed0028023 vs. ExPASy TrEMBL
Match: A0A6J1H6X6 (uncharacterized protein LOC111460998 OS=Cucurbita moschata OX=3662 GN=LOC111460998 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 8.4e-52 Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Sed0028023 vs. ExPASy TrEMBL
Match: A0A6J1KU03 (uncharacterized protein LOC111498188 OS=Cucurbita maxima OX=3661 GN=LOC111498188 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51 Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Sed0028023 vs. ExPASy TrEMBL
Match: A0A1S3CBJ5 (uncharacterized protein LOC103498932 OS=Cucumis melo OX=3656 GN=LOC103498932 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 8.9e-46 Identity = 99/125 (79.20%), Postives = 103/125 (82.40%), Query Frame = 0
BLAST of Sed0028023 vs. ExPASy TrEMBL
Match: A0A2P5C0K2 (RmlC-like cupins superfamily protein OS=Trema orientale OX=63057 GN=TorRG33x02_301930 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 9.3e-43 Identity = 84/105 (80.00%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of Sed0028023 vs. ExPASy TrEMBL
Match: A0A2P5AKT6 (RmlC-like cupins superfamily protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_322550 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42 Identity = 84/111 (75.68%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of Sed0028023 vs. TAIR 10
Match: AT3G04300.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 138.3 bits (347), Expect = 3.9e-33 Identity = 62/93 (66.67%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of Sed0028023 vs. TAIR 10
Match: AT4G28703.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 135.2 bits (339), Expect = 3.3e-32 Identity = 65/102 (63.73%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Sed0028023 vs. TAIR 10
Match: AT4G10300.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 119.0 bits (297), Expect = 2.4e-27 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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