Sed0028016 (gene) Chayote v1

Overview


Name	Sed0028016
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SPEAR1
Location	LG03: 11306329 .. 11308210 (+)
RNA-Seq Expression	Sed0028016
Synteny	Sed0028016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATGGTTATTTTGAGAAGATGAATATGGGGAATATAGATAAGAGGAGTAGGTCGGCGACGGCGTCGATGCGGAGGAGAGGGAGGAACGGCGGCGGAGAAAAACCGAAACCGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCCAAATGGGTTGTGCTCTTTATTATTGCCGCCCTTTCTTCCCAAATCTCTCACTCGTAAATCTCTCCCTCCCTTGCTTTTGTTCGTTGTTGCGATAAATCGATCGAAAGTGAACATAGTTTAATTGATATTTTGAATGTTTTAGAAACTATAAGATTTATGGAGTTACTAAAGAAAACAAAAAGAGATTTCATGCTATGTTTGAATCATTTGGAGAAATTAGGGGAATATTTTTACTAAATTGTTTTTTCTCTTCTCTTTGAATCATTTCATGGTAGTCGTTTTAAATTTTCTTTGAATCATTTGCTTGAAACGTTTTAAATTAAAATGGACTTTTACTATTTCATGACAGTTTTGTTCTTAAGGGATTTAGGGTTTTTTATATTTCCTTTTCTTGCATTTTTAATGGTTGAGCTGATGATTACATGTAGGGTGATGATATGAGAATGCAAACACCATCTTCTTCTTTTTCTCACTTCACAACACAATCTTCATCTTCTCCATCCTCTGGCTTCCACCAAAACTTTATGGTCTCTCTATTTTCTATGAAAAAAAATTAATGATAAATATTAAATAAATAAAAAATAATAATTTTAGAATTACATTATATGTGGAATTTTATTATTATTATTATTATTTTTTTTTACAATAATCATTCATCACATTAAATATAGAAATATACACATATGATCAATTATTGAATAAATTGGTTTTTATAATATGTTTGTTAATCATGAGTGTATCTTTGCTTACTTTTCCCTTTAAATGTATACCAGGGAATGGAAAAATATGAAAGAGGGAGCTTCAGATATGAGGATTCTCAGCCAACAACTTCTATGAGGTAAGCTTTTATTTATTTACTATTATTATTATTAATATTTTCTTTAAAATATTTAATTTGTGTGGTAAAATTTAGACCATTCATTTTATTTTCTATTAAATTTTAATTAATTAATTAATTTGTGATTTGTGATATTTAGATGGGAGCCAAGTAATTCATTCCTGGAGACGACCCAACATTTTGGGCAACAATACATGATTGGACAACTTTTCAATCCACATGTACAGGTTAGTTAATTAAATTAGCATATGCTCTTTATTTTATGTTTTTTATTTAGTTATCGGACTGGAGGACAAATACCGATTCTCGAGTTTGAATCTATGCCACAGTTATTAAATTGATTTACAACCAAACAGTGAAACCACTCCACGACTGACCTATTCGGTTAATTTTATGCGTTCTTACACAAGTTTACATGTGAAAAAGAATAAATAAATGAAACTCTATTAATCAATATCGTCAGACAATATGTGGGGTTGGAATTCCAAATTTTTTATTTTCTAGTCTGAAATATATAACTTATTTAATTGAGTTATGCTTAATTTAATACATTAATATCTCTTAATAGTTTGGTAATATCGTGATTAAATTATTATCATAATTAACAAGAATTATTAGTATTTGATTTATTACAGTTTCTTAATAGAAAGAAAAAGCTTACTGTTATAATGTTTTAAAGAAATTGAAAGTTGTTGAATAATGTAATAGAAATGTGACATTTTTTGTTTATATGAAATGTATGGAAAGTGCAGGATTCAATGCACAAGAACATGAATACAAAATATGGGAGGAATGCAATTGGTTCAAATAGCTGTGAGAATTATGAATCTAGTGACACACAAGAGCTAGATTTGGAGCTGAGATTATCAATCTAA

mRNA sequence

ATGGGGAATGGTTATTTTGAGAAGATGAATATGGGGAATATAGATAAGAGGAGTAGGTCGGCGACGGCGTCGATGCGGAGGAGAGGGAGGAACGGCGGCGGAGAAAAACCGAAACCGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCCAAATGGGTTGTGCTCTTTATTATTGCCGCCCTTTCTTCCCAAATCTCTCACTCGGTGATGATATGAGAATGCAAACACCATCTTCTTCTTTTTCTCACTTCACAACACAATCTTCATCTTCTCCATCCTCTGGCTTCCACCAAAACTTTATGGGAATGGAAAAATATGAAAGAGGGAGCTTCAGATATGAGGATTCTCAGCCAACAACTTCTATGAGATGGGAGCCAAGTAATTCATTCCTGGAGACGACCCAACATTTTGGGCAACAATACATGATTGGACAACTTTTCAATCCACATGTACAGGATTCAATGCACAAGAACATGAATACAAAATATGGGAGGAATGCAATTGGTTCAAATAGCTGTGAGAATTATGAATCTAGTGACACACAAGAGCTAGATTTGGAGCTGAGATTATCAATCTAA

Coding sequence (CDS)

ATGGGGAATGGTTATTTTGAGAAGATGAATATGGGGAATATAGATAAGAGGAGTAGGTCGGCGACGGCGTCGATGCGGAGGAGAGGGAGGAACGGCGGCGGAGAAAAACCGAAACCGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCCAAATGGGTTGTGCTCTTTATTATTGCCGCCCTTTCTTCCCAAATCTCTCACTCGGTGATGATATGAGAATGCAAACACCATCTTCTTCTTTTTCTCACTTCACAACACAATCTTCATCTTCTCCATCCTCTGGCTTCCACCAAAACTTTATGGGAATGGAAAAATATGAAAGAGGGAGCTTCAGATATGAGGATTCTCAGCCAACAACTTCTATGAGATGGGAGCCAAGTAATTCATTCCTGGAGACGACCCAACATTTTGGGCAACAATACATGATTGGACAACTTTTCAATCCACATGTACAGGATTCAATGCACAAGAACATGAATACAAAATATGGGAGGAATGCAATTGGTTCAAATAGCTGTGAGAATTATGAATCTAGTGACACACAAGAGCTAGATTTGGAGCTGAGATTATCAATCTAA

Protein sequence

MGNGYFEKMNMGNIDKRSRSATASMRRRGRNGGGEKPKPPQRGLGVAQLEKIRLHGQMGCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQNFMGMEKYERGSFRYEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYGRNAIGSNSCENYESSDTQELDLELRLSI

Homology

[Close]

BLAST of Sed0028016 vs. NCBI nr
Match: XP_038889470.1 (protein SPEAR1-like [Benincasa hispida])

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-60
Identity = 143/210 (68.10%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 1   MGNGYFEKMNMG---NIDKR-----SRSATASMRRRGRNG-GGEKPKPPQRGLGVAQLEK 60
           MG+GYF +MNMG   NI+KR     +  A A   RRGR G GGEKPK PQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNNNIEKRRSGSPATGAAAGTGRRGRKGSGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGQMGCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSS--GFHQNFMGM 120
           IRLHG+MGCA  Y   F+PNLS GDDMRMQT ++SFS+ +TQSSSS  +   FHQNFMG+
Sbjct: 61  IRLHGEMGCAA-YSGHFYPNLSAGDDMRMQT-TASFSYSSTQSSSSSPNFYAFHQNFMGI 120

Query: 121 EKYERGSFRYEDSQPTT-SMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTK 180
            +YERGS RY DSQPTT S RW+PSN+FLE TQHFGQ  M G LFNPHVQDS+HKNMNTK
Sbjct: 121 GEYERGSLRYGDSQPTTSSFRWDPSNTFLE-TQHFGQPNMTGHLFNPHVQDSIHKNMNTK 180

Query: 181 YGRNAIGSNSCENYESSDTQELDLELRLSI 199
           YG +++GS+S +N ESS+T+ELDLELRLSI
Sbjct: 181 YGSDSMGSSS-QNSESSETRELDLELRLSI 206

[Close]

BLAST of Sed0028016 vs. NCBI nr
Match: XP_008458547.1 (PREDICTED: protein SPEAR1 [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-58
Identity = 144/206 (69.90%), Postives = 165/206 (80.10%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDK-RSRSATASMRRRGR-NGGGEKPKPPQRGLGVAQLEKIRLHGQM 60
           MG+GYF +MN  NI+K RS S  A+  RRGR  GGGEKPK PQRGLGVAQLEKIRLHG+M
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSPAAAGGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEM 60

Query: 61  GCALYYCRPFFPNLSLGDDMRMQTPS-SSFSHFTTQSSSSP--SSGFHQNFMGMEKYERG 120
           GCA Y    F+PNLS GDDMRMQT + S+FS+ +TQSSSS   S GFHQNFMGM +YERG
Sbjct: 61  GCAAY--SHFYPNLSAGDDMRMQTTTPSNFSYSSTQSSSSSPNSYGFHQNFMGMGEYERG 120

Query: 121 SFRYEDSQPTT--SMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDS-MHKNMNTKYGRN 180
           SFRY DSQ TT  S+RW+PSN+FLE TQHFGQ  M G LFN HVQDS +H NMNTKYG +
Sbjct: 121 SFRYGDSQLTTTSSLRWDPSNTFLE-TQHFGQPNMSGHLFNSHVQDSIIHNNMNTKYGSD 180

Query: 181 AIGSNSCENYESSDTQELDLELRLSI 199
           ++GS+S +N ESS+TQELDLELRLSI
Sbjct: 181 SMGSSS-QNSESSETQELDLELRLSI 200

[Close]

BLAST of Sed0028016 vs. NCBI nr
Match: XP_011648648.1 (protein SPEAR1 [Cucumis sativus] >KGN60603.1 hypothetical protein Csa_019375 [Cucumis sativus] >QBL95714.1 SPOROCYTELESS-like EAR-containing protein 1 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-58
Identity = 143/207 (69.08%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDK-RSRSATASMRRRGR-NGGGEKPKPPQRGLGVAQLEKIRLHGQM 60
           MG+GYF +MN  NI+K RS S +A+  RRGR  GGGEKPK PQRGLGVAQLEKIRLHG+M
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSPSAAGGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEM 60

Query: 61  GCALYYCRPFFPNLSLGDDMRMQ---TPSSSFSHFTTQSSSSPSS-GFHQNFMGMEKYER 120
           GCA Y    F+PNLS GDD RMQ   TP+ S+S     S+SSP+S GFHQNFMGM +YER
Sbjct: 61  GCAAY--SHFYPNLSAGDDRRMQTTTTPNFSYSSTHESSASSPNSYGFHQNFMGMGEYER 120

Query: 121 GSFRYEDSQPTT--SMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSM-HKNMNTKYGR 180
           GSFRY DSQ TT  S+RW+PSN+FLE TQHFGQ  M G LFNPHVQDSM HKN+NTKYG 
Sbjct: 121 GSFRYGDSQLTTTSSLRWDPSNTFLE-TQHFGQPNMSGHLFNPHVQDSMIHKNINTKYGS 180

Query: 181 NAIGSNSCENYESSDTQELDLELRLSI 199
           +++GS+S +N ESS+TQELDLELRLSI
Sbjct: 181 DSMGSSS-QNSESSETQELDLELRLSI 201

[Close]

BLAST of Sed0028016 vs. NCBI nr
Match: XP_023522169.1 (protein SPEAR1-like [Cucurbita pepo subsp. pepo] >XP_023547325.1 protein SPEAR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-52
Identity = 126/208 (60.58%), Postives = 153/208 (73.56%), Query Frame = 0


Query: 1   MGNGYFEKMNMG--NIDKR------SRSATASMRRRGR--NGGGEKPKPPQRGLGVAQLE 60
           MG+GYF +MNMG  NIDKR      S +A A++ RRGR   GGGEKPK PQRGLGVAQLE
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSPSSAAAVATVVRRGRKGGGGGEKPKQPQRGLGVAQLE 60

Query: 61  KIRLHGQMGCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQNFMGME 120
           KIRLHG+MGCA Y     +PNLS  DDMR++          T SSSSPS GFHQNFMGM 
Sbjct: 61  KIRLHGEMGCAAY--GHLYPNLSASDDMRIE----------TASSSSPSYGFHQNFMGMG 120

Query: 121 KYERGSFRYEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYG 180
           ++ERGSF Y DSQP TS+RW+P+++FLE TQHFGQ  M G LFN H+QDS+H N+N KYG
Sbjct: 121 EHERGSFGYGDSQPITSLRWDPTHTFLE-TQHFGQPNMTGHLFNTHLQDSIHGNINVKYG 180

Query: 181 RNAIGSNSCENYESSDTQELDLELRLSI 199
            +++ S+S    ++S++ ELDLELRLSI
Sbjct: 181 SDSMTSSS----QNSESSELDLELRLSI 191

[Close]

BLAST of Sed0028016 vs. NCBI nr
Match: XP_022999537.1 (protein SPEAR3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 208.0 bits (528), Expect = 7.5e-50
Identity = 120/200 (60.00%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 1   MGNGYFEKMNMG--NIDKRSRSATASMRRRGRNGGGEKPKPPQRGLGVAQLEKIRLHGQM 60
           MG+GYF +MNMG  NIDKR   + A +RR  + GGGEKPK PQRGLGVAQLEKIRLHG+M
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSAAVVRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEM 60

Query: 61  GCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQNFMGMEKYERGSFR 120
           GCA  Y  P +P LS  DDMR++          T SSSSPS GFHQNFMGM ++ERGS R
Sbjct: 61  GCAA-YGHP-YPYLSASDDMRIE----------TASSSSPSYGFHQNFMGMGEHERGSLR 120

Query: 121 YEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYGRNAIGSNS 180
             DSQPTTS+RW+PS++FLE T HFGQ  M G LFN HVQDS+  N+N KYG +++  + 
Sbjct: 121 CGDSQPTTSLRWDPSHTFLE-THHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDSMRLSR 180

Query: 181 CENYESSDTQELDLELRLSI 199
               ++S++ ELDLELRLSI
Sbjct: 181 ----QNSESSELDLELRLSI 183

[Close]

BLAST of Sed0028016 vs. ExPASy Swiss-Prot
Match: Q6IDB0 (Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-23
Identity = 83/208 (39.90%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDKRS-RSATASMRRRGRN-GGGEKPKPPQRGLGVAQLEKIRLHGQM 60
           MG+ +F +  MG     S  S+++S  +RG+N  G +KPK PQRGLGVAQLEKIRLHG+ 
Sbjct: 1   MGSSFFGRPKMGGSSSSSPTSSSSSPAKRGKNKNGSDKPKQPQRGLGVAQLEKIRLHGEY 60

Query: 61  GCALYYCRPFFPNLSLGDDMRMQ-----TPSSSFSHFTTQSSSSPSS--GFHQNFM---G 120
            C  +   P +   +  +D+R+Q      PSSS S F+  SSS P +  GFH N M    
Sbjct: 61  NCNSFNTYPSYHPSTYQEDVRIQGGYPSIPSSSPS-FSYASSSPPPAPYGFHPNMMMNAN 120

Query: 121 MEKYERGSFRYEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTK 180
            ++YER + RY DSQP  +  W PS   LE +QHF             V+ +  ++   +
Sbjct: 121 NDQYERTTIRYGDSQPHRAPSWNPSYGILE-SQHF-------------VEPNTTRHFLHE 180

Query: 181 YGRNAIGSNSCENYESSDTQELDLELRL 197
             RN    +  +N+E+S+  ELDLELRL
Sbjct: 181 DQRNISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Sed0028016 vs. ExPASy Swiss-Prot
Match: Q84X40 (Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-16
Identity = 74/203 (36.45%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDKRSRSATAS----MRRRGRNGGGEKPKPPQRGLGVAQLEKIRLHG 60
           MG+ +F + N+      S S T+S      RRG+  G EKPK PQRGLGVAQLEKIRLHG
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  QMGCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQN-FMGMEKYERG 120
           +M C  +    + P+L   +D+RMQ   SS       S SS   GF+ N  MG+      
Sbjct: 61  EMSCNSF--NSYNPSLYPQEDVRMQGGYSSI-----PSQSSAPYGFYPNMMMGV------ 120

Query: 121 SFRYEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYGRNAIG 180
              + D     +M W PS   LE +QH  +  +     N     +  ++        ++G
Sbjct: 121 ---HRDQYDRATMSWNPSYGILE-SQHSLEPNITRHFLNEDPSSTTRRS-------KSLG 178

Query: 181 SNSCENYESSDTQELDLELRLSI 199
           S   ++  SS+ QE+DLELRLS+
Sbjct: 181 S-GIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Sed0028016 vs. ExPASy TrEMBL
Match: A0A0A0LFV0 (SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 7.3e-59
Identity = 143/207 (69.08%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDK-RSRSATASMRRRGR-NGGGEKPKPPQRGLGVAQLEKIRLHGQM 60
           MG+GYF +MN  NI+K RS S +A+  RRGR  GGGEKPK PQRGLGVAQLEKIRLHG+M
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSPSAAGGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEM 60

Query: 61  GCALYYCRPFFPNLSLGDDMRMQ---TPSSSFSHFTTQSSSSPSS-GFHQNFMGMEKYER 120
           GCA Y    F+PNLS GDD RMQ   TP+ S+S     S+SSP+S GFHQNFMGM +YER
Sbjct: 61  GCAAY--SHFYPNLSAGDDRRMQTTTTPNFSYSSTHESSASSPNSYGFHQNFMGMGEYER 120

Query: 121 GSFRYEDSQPTT--SMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSM-HKNMNTKYGR 180
           GSFRY DSQ TT  S+RW+PSN+FLE TQHFGQ  M G LFNPHVQDSM HKN+NTKYG 
Sbjct: 121 GSFRYGDSQLTTTSSLRWDPSNTFLE-TQHFGQPNMSGHLFNPHVQDSMIHKNINTKYGS 180

Query: 181 NAIGSNSCENYESSDTQELDLELRLSI 199
           +++GS+S +N ESS+TQELDLELRLSI
Sbjct: 181 DSMGSSS-QNSESSETQELDLELRLSI 201

[Close]

BLAST of Sed0028016 vs. ExPASy TrEMBL
Match: A0A1S3C7M3 (protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 7.3e-59
Identity = 144/206 (69.90%), Postives = 165/206 (80.10%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDK-RSRSATASMRRRGR-NGGGEKPKPPQRGLGVAQLEKIRLHGQM 60
           MG+GYF +MN  NI+K RS S  A+  RRGR  GGGEKPK PQRGLGVAQLEKIRLHG+M
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSPAAAGGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEM 60

Query: 61  GCALYYCRPFFPNLSLGDDMRMQTPS-SSFSHFTTQSSSSP--SSGFHQNFMGMEKYERG 120
           GCA Y    F+PNLS GDDMRMQT + S+FS+ +TQSSSS   S GFHQNFMGM +YERG
Sbjct: 61  GCAAY--SHFYPNLSAGDDMRMQTTTPSNFSYSSTQSSSSSPNSYGFHQNFMGMGEYERG 120

Query: 121 SFRYEDSQPTT--SMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDS-MHKNMNTKYGRN 180
           SFRY DSQ TT  S+RW+PSN+FLE TQHFGQ  M G LFN HVQDS +H NMNTKYG +
Sbjct: 121 SFRYGDSQLTTTSSLRWDPSNTFLE-TQHFGQPNMSGHLFNSHVQDSIIHNNMNTKYGSD 180

Query: 181 AIGSNSCENYESSDTQELDLELRLSI 199
           ++GS+S +N ESS+TQELDLELRLSI
Sbjct: 181 SMGSSS-QNSESSETQELDLELRLSI 200

[Close]

BLAST of Sed0028016 vs. ExPASy TrEMBL
Match: A0A6J1KB48 (protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.6e-50
Identity = 120/200 (60.00%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 1   MGNGYFEKMNMG--NIDKRSRSATASMRRRGRNGGGEKPKPPQRGLGVAQLEKIRLHGQM 60
           MG+GYF +MNMG  NIDKR   + A +RR  + GGGEKPK PQRGLGVAQLEKIRLHG+M
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSAAVVRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEM 60

Query: 61  GCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQNFMGMEKYERGSFR 120
           GCA  Y  P +P LS  DDMR++          T SSSSPS GFHQNFMGM ++ERGS R
Sbjct: 61  GCAA-YGHP-YPYLSASDDMRIE----------TASSSSPSYGFHQNFMGMGEHERGSLR 120

Query: 121 YEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYGRNAIGSNS 180
             DSQPTTS+RW+PS++FLE T HFGQ  M G LFN HVQDS+  N+N KYG +++  + 
Sbjct: 121 CGDSQPTTSLRWDPSHTFLE-THHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDSMRLSR 180

Query: 181 CENYESSDTQELDLELRLSI 199
               ++S++ ELDLELRLSI
Sbjct: 181 ----QNSESSELDLELRLSI 183

[Close]

BLAST of Sed0028016 vs. ExPASy TrEMBL
Match: A0A6J1G472 (protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111450631 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 121/207 (58.45%), Postives = 146/207 (70.53%), Query Frame = 0


Query: 1   MGNGYFEKMNMGN--IDKR------SRSATASMRRRGR-NGGGEKPKPPQRGLGVAQLEK 60
           MG+GYF +MNMGN  IDKR      + +A A++ RRGR  GGGEKPK PQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNYIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGQMGCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQNFMGMEK 120
           IRLHG+MGCA  Y  P +PNLS  DDMR++          T SSSSPS GF QNFMG   
Sbjct: 61  IRLHGEMGCAA-YGHP-YPNLSASDDMRIE----------TASSSSPSYGFRQNFMG--- 120

Query: 121 YERGSFRYEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYGR 180
                  Y DSQPTTS+RW+P+++FLE TQHFGQ  M G LFN HVQDS+H N+N KYG 
Sbjct: 121 -------YGDSQPTTSLRWDPTHTFLE-TQHFGQPNMTGHLFNTHVQDSIHGNINVKYGG 180

Query: 181 NAIGSNSCENYESSDTQELDLELRLSI 199
           +++ S+S    ++S++ ELDLELRLSI
Sbjct: 181 DSMRSSS----QNSESSELDLELRLSI 180

[Close]

BLAST of Sed0028016 vs. ExPASy TrEMBL
Match: A0A6J1HQB1 (protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111465705 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44
Identity = 117/202 (57.92%), Postives = 134/202 (66.34%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDKR---SRSATASMRRRGRNGGGEKPKPPQRGLGVAQLEKIRLHGQ 60
           MG+GYF +MNMGNIDKR   S +A A+ RR  + GGGEKPK PQRGLGVAQLEKIRLHG+
Sbjct: 1   MGSGYFGEMNMGNIDKRRSGSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQNFMGMEKYERGSF 120
           MGCA Y    F+PNLS                                  GM +YERGSF
Sbjct: 61  MGCAGY--GHFYPNLS---------------------------------AGMGEYERGSF 120

Query: 121 RYEDSQP-TTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYGRNAIGS 180
           RY DSQP TTS+RW  SN+ +E TQHFG+  M G L NP V DSMHKNMNTKYG ++IGS
Sbjct: 121 RYGDSQPTTTSIRWNMSNTSME-TQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGS 165

Query: 181 NSCENYESSDTQELDLELRLSI 199
           +S +N ESS+T ELDLELRLSI
Sbjct: 181 SS-QNSESSETHELDLELRLSI 165

[Close]

BLAST of Sed0028016 vs. TAIR 10
Match: AT4G28840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 83/208 (39.90%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDKRS-RSATASMRRRGRN-GGGEKPKPPQRGLGVAQLEKIRLHGQM 60
           MG+ +F +  MG     S  S+++S  +RG+N  G +KPK PQRGLGVAQLEKIRLHG+ 
Sbjct: 1   MGSSFFGRPKMGGSSSSSPTSSSSSPAKRGKNKNGSDKPKQPQRGLGVAQLEKIRLHGEY 60

Query: 61  GCALYYCRPFFPNLSLGDDMRMQ-----TPSSSFSHFTTQSSSSPSS--GFHQNFM---G 120
            C  +   P +   +  +D+R+Q      PSSS S F+  SSS P +  GFH N M    
Sbjct: 61  NCNSFNTYPSYHPSTYQEDVRIQGGYPSIPSSSPS-FSYASSSPPPAPYGFHPNMMMNAN 120

Query: 121 MEKYERGSFRYEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTK 180
            ++YER + RY DSQP  +  W PS   LE +QHF             V+ +  ++   +
Sbjct: 121 NDQYERTTIRYGDSQPHRAPSWNPSYGILE-SQHF-------------VEPNTTRHFLHE 180

Query: 181 YGRNAIGSNSCENYESSDTQELDLELRL 197
             RN    +  +N+E+S+  ELDLELRL
Sbjct: 181 DQRNISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Sed0028016 vs. TAIR 10
Match: AT2G20080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-17
Identity = 74/203 (36.45%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDKRSRSATAS----MRRRGRNGGGEKPKPPQRGLGVAQLEKIRLHG 60
           MG+ +F + N+      S S T+S      RRG+  G EKPK PQRGLGVAQLEKIRLHG
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  QMGCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQN-FMGMEKYERG 120
           +M C  +    + P+L   +D+RMQ   SS       S SS   GF+ N  MG+      
Sbjct: 61  EMSCNSF--NSYNPSLYPQEDVRMQGGYSSI-----PSQSSAPYGFYPNMMMGV------ 120

Query: 121 SFRYEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYGRNAIG 180
              + D     +M W PS   LE +QH  +  +     N     +  ++        ++G
Sbjct: 121 ---HRDQYDRATMSWNPSYGILE-SQHSLEPNITRHFLNEDPSSTTRRS-------KSLG 178

Query: 181 SNSCENYESSDTQELDLELRLSI 199
           S   ++  SS+ QE+DLELRLS+
Sbjct: 181 S-GIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Sed0028016 vs. TAIR 10
Match: AT2G20080.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-12
Identity = 65/202 (32.18%), Postives = 93/202 (46.04%), Query Frame = 0


Query: 1   MGNGYFEKMNMGNIDKRSRSATAS----MRRRGRNGGGEKPKPPQRGLGVAQLEKIRLHG 60
           MG+ +F + N+      S S T+S      RRG+  G EKPK PQRGLGVAQLEKIRLHG
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  QMGCALYYCRPFFPNLSLGDDMRMQTPSSSFSHFTTQSSSSPSSGFHQNFMGMEKYERGS 120
           +M C                        +SF+ +    S  P  G H+     ++Y+R  
Sbjct: 61  EMSC------------------------NSFNSY--NPSLYPQMGVHR-----DQYDR-- 120

Query: 121 FRYEDSQPTTSMRWEPSNSFLETTQHFGQQYMIGQLFNPHVQDSMHKNMNTKYGRNAIGS 180
                     +M W PS   LE +QH  +  +     N     +  ++        ++GS
Sbjct: 121 ---------ATMSWNPSYGILE-SQHSLEPNITRHFLNEDPSSTTRRS-------KSLGS 151

Query: 181 NSCENYESSDTQELDLELRLSI 199
              ++  SS+ QE+DLELRLS+
Sbjct: 181 -GIQHSGSSENQEVDLELRLSL 151

The following BLAST results are available for this feature:

BLAST of Sed0028016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889470.1	1.2e-60	68.10	protein SPEAR1-like [Benincasa hispida]	[more]
XP_008458547.1	1.5e-58	69.90	PREDICTED: protein SPEAR1 [Cucumis melo]	[more]
XP_011648648.1	1.5e-58	69.08	protein SPEAR1 [Cucumis sativus] >KGN60603.1 hypothetical protein Csa_019375 [Cu...	[more]
XP_023522169.1	1.6e-52	60.58	protein SPEAR1-like [Cucurbita pepo subsp. pepo] >XP_023547325.1 protein SPEAR1-...	[more]
XP_022999537.1	7.5e-50	60.00	protein SPEAR3-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Sed0028016 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDB0	3.7e-23	39.90	Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1	[more]
Q84X40	1.5e-16	36.45	Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1	[more]

BLAST of Sed0028016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFV0	7.3e-59	69.08	SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1...	[more]
A0A1S3C7M3	7.3e-59	69.90	protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1	[more]
A0A6J1KB48	3.6e-50	60.00	protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 ...	[more]
A0A6J1G472	1.4e-46	58.45	protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111450631 PE=4 SV=1	[more]
A0A6J1HQB1	1.0e-44	57.92	protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111465705 PE=4 SV=1	[more]

BLAST of Sed0028016 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28840.1	2.6e-24	39.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.1	1.1e-17	36.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.2	5.1e-12	32.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 1..198
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 1..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028016.1	Sed0028016.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity